BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011341
(488 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255560615|ref|XP_002521321.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
gi|223539399|gb|EEF40989.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
Length = 608
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/489 (84%), Positives = 444/489 (90%), Gaps = 1/489 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD+FLSYDYIFRTFGAGVADLV
Sbjct: 120 MRASGDPYLQHCVETAVLLAMIGANSTVVAAGLLHDTLDDSFLSYDYIFRTFGAGVADLV 179
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLS LSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM TLDALPL
Sbjct: 180 EGVSKLSHLSKLARENNTADKTVEADRLHTMFLAMADARAVLIKLADRLHNMKTLDALPL 239
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGIS+WK QLENLCFKHLNPD+H +L+S+LVE FDEA+VT
Sbjct: 240 VKQQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPDKHRDLASRLVESFDEAVVT 299
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SA EKLEQALKD +IS+ VL GRHKSLYSI+CKMLKKKL MDEIHDI+GLRLIVENEEDC
Sbjct: 300 SATEKLEQALKDDDISYHVLSGRHKSLYSIYCKMLKKKLNMDEIHDIHGLRLIVENEEDC 359
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+ALRVVHQLW+EVPGK KDYI+RPKFNGYQSLHTVV EG+VPLEVQIRTKEMHLQAE
Sbjct: 360 YRALRVVHQLWSEVPGKFKDYISRPKFNGYQSLHTVVRAEGMVPLEVQIRTKEMHLQAEC 419
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC+HSSFVLQMVEWARW++TWQCE MSK RS VG+ DSIK PC FP+H+
Sbjct: 420 GFAAHWRYKEGDCKHSSFVLQMVEWARWIVTWQCETMSKYRSSVGHADSIKAPCAFPTHS 479
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
DDCPFSYKP DGPVF+IMIENDKMSVQEFP +ST+MDLL RAGRGSSRWSPYGFP+K
Sbjct: 480 DDCPFSYKPHRGQDGPVFIIMIENDKMSVQEFPANSTMMDLLVRAGRGSSRWSPYGFPVK 539
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGL-AVSNTGPA 479
EELRPRLNH + D CKLKMGDVVELTPAIP+KSLTE REEIQRMY+RGL VS+T A
Sbjct: 540 EELRPRLNHMPLSDATCKLKMGDVVELTPAIPNKSLTECREEIQRMYDRGLNTVSSTATA 599
Query: 480 VTSMVGSRS 488
+ M G RS
Sbjct: 600 ASGMAGWRS 608
>gi|297742998|emb|CBI35865.3| unnamed protein product [Vitis vinifera]
Length = 535
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/488 (83%), Positives = 444/488 (90%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETA+LLA IGANSTVV +GLLHDTLDD+F+ YD IF TFGAGVADLV
Sbjct: 48 MRASGDPYLQHCVETAVLLAKIGANSTVVVSGLLHDTLDDSFMGYDDIFGTFGAGVADLV 107
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLAR+NNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL
Sbjct: 108 EGVSKLSQLSKLARDNNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 167
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIFVPLANRLGISTWK QLENLCFKHLNPDQH ELSSKLV+ FDEAM+T
Sbjct: 168 GKQQRFAKETLEIFVPLANRLGISTWKEQLENLCFKHLNPDQHKELSSKLVKSFDEAMIT 227
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SA EKLE ALKD+ IS+ VL GRHKSLYSI+CKMLKK +TMDEIHDI+GLRLIVENEEDC
Sbjct: 228 SAKEKLEPALKDEAISYHVLSGRHKSLYSIYCKMLKKNMTMDEIHDIHGLRLIVENEEDC 287
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH+LW+EVPG+ KDYI KFNGY+SLHTVV GEG+VPLEVQIRT+EMHLQAE+
Sbjct: 288 YKALGVVHRLWSEVPGRFKDYIKHSKFNGYRSLHTVVRGEGMVPLEVQIRTREMHLQAEY 347
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC HSSFVLQMVEWARWV+TW CE MSKD+S VG +SIKPPC FPSH+
Sbjct: 348 GFAAHWRYKEGDCTHSSFVLQMVEWARWVVTWHCETMSKDQSPVGYDNSIKPPCKFPSHS 407
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
D CPFSYKP CS DGPVFVIM+ENDKMSVQE P +ST+MDLLER GRGSSRW+PYGFP+K
Sbjct: 408 DGCPFSYKPDCSQDGPVFVIMLENDKMSVQECPANSTIMDLLERTGRGSSRWTPYGFPIK 467
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLNH+AV DP CKLKMGDVVELTPAIPDKSL YREEIQRMYERG++VS+ A
Sbjct: 468 EELRPRLNHEAVNDPTCKLKMGDVVELTPAIPDKSLIVYREEIQRMYERGVSVSSKWSAA 527
Query: 481 TSMVGSRS 488
+SMVG RS
Sbjct: 528 SSMVGWRS 535
>gi|225442114|ref|XP_002273796.1| PREDICTED: GTP pyrophosphokinase-like [Vitis vinifera]
Length = 724
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/488 (83%), Positives = 444/488 (90%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETA+LLA IGANSTVV +GLLHDTLDD+F+ YD IF TFGAGVADLV
Sbjct: 237 MRASGDPYLQHCVETAVLLAKIGANSTVVVSGLLHDTLDDSFMGYDDIFGTFGAGVADLV 296
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLAR+NNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL
Sbjct: 297 EGVSKLSQLSKLARDNNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 356
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIFVPLANRLGISTWK QLENLCFKHLNPDQH ELSSKLV+ FDEAM+T
Sbjct: 357 GKQQRFAKETLEIFVPLANRLGISTWKEQLENLCFKHLNPDQHKELSSKLVKSFDEAMIT 416
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SA EKLE ALKD+ IS+ VL GRHKSLYSI+CKMLKK +TMDEIHDI+GLRLIVENEEDC
Sbjct: 417 SAKEKLEPALKDEAISYHVLSGRHKSLYSIYCKMLKKNMTMDEIHDIHGLRLIVENEEDC 476
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH+LW+EVPG+ KDYI KFNGY+SLHTVV GEG+VPLEVQIRT+EMHLQAE+
Sbjct: 477 YKALGVVHRLWSEVPGRFKDYIKHSKFNGYRSLHTVVRGEGMVPLEVQIRTREMHLQAEY 536
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC HSSFVLQMVEWARWV+TW CE MSKD+S VG +SIKPPC FPSH+
Sbjct: 537 GFAAHWRYKEGDCTHSSFVLQMVEWARWVVTWHCETMSKDQSPVGYDNSIKPPCKFPSHS 596
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
D CPFSYKP CS DGPVFVIM+ENDKMSVQE P +ST+MDLLER GRGSSRW+PYGFP+K
Sbjct: 597 DGCPFSYKPDCSQDGPVFVIMLENDKMSVQECPANSTIMDLLERTGRGSSRWTPYGFPIK 656
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLNH+AV DP CKLKMGDVVELTPAIPDKSL YREEIQRMYERG++VS+ A
Sbjct: 657 EELRPRLNHEAVNDPTCKLKMGDVVELTPAIPDKSLIVYREEIQRMYERGVSVSSKWSAA 716
Query: 481 TSMVGSRS 488
+SMVG RS
Sbjct: 717 SSMVGWRS 724
>gi|347730539|gb|AEP20477.1| RelA/SpoT-like protein [Quercus suber]
Length = 506
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/488 (82%), Positives = 447/488 (91%), Gaps = 3/488 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETA++LA IGANSTVVAAGLLHDTLDD+F++YDY+F TFGAGVADLV
Sbjct: 22 MRASGDPYLQHCVETAVMLALIGANSTVVAAGLLHDTLDDSFMNYDYVFGTFGAGVADLV 81
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLS LSKLAR+NNTA+KTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP
Sbjct: 82 EGVSKLSHLSKLARDNNTANKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPP 141
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGIS+WK QLENLCFKHL+PDQH ELSSKLVE FDEAM+T
Sbjct: 142 AKQQRFAKETLEIFAPLANRLGISSWKDQLENLCFKHLHPDQHEELSSKLVESFDEAMIT 201
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SA EKL+QALK K++S+ L GRHKSLYSI+ KMLKKKLTMDEIHDI+GLRLIV+NEEDC
Sbjct: 202 SATEKLKQALKAKSVSYQDLSGRHKSLYSIYSKMLKKKLTMDEIHDIHGLRLIVDNEEDC 261
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+ALRVVHQLW EVPGK+KDYI+ PKFNGY+SLHTVV EG+VPLEVQIRT+EMHLQAEF
Sbjct: 262 YKALRVVHQLWPEVPGKLKDYISHPKFNGYRSLHTVVMDEGMVPLEVQIRTREMHLQAEF 321
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC+H SFVLQMVEWARWV+T QCE M+ S + DSI+PPCTFPSH+
Sbjct: 322 GFAAHWRYKEGDCKHPSFVLQMVEWARWVVTCQCETMN---SSIAYADSIRPPCTFPSHS 378
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCP+SYKP C DGPVFVIMIENDKMSVQEFP +ST+MDLLER+GRGSSRW+PYGFPLK
Sbjct: 379 EDCPYSYKPHCGQDGPVFVIMIENDKMSVQEFPANSTIMDLLERSGRGSSRWTPYGFPLK 438
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLNH+ V DP CKLKMGDV+ELTPAI DKSLTEYREEIQRMY+RGL VS++GPA
Sbjct: 439 EELRPRLNHQPVNDPMCKLKMGDVLELTPAISDKSLTEYREEIQRMYDRGLTVSSSGPAA 498
Query: 481 TSMVGSRS 488
+S+VG RS
Sbjct: 499 SSIVGWRS 506
>gi|356558920|ref|XP_003547750.1| PREDICTED: uncharacterized protein LOC100787301 [Glycine max]
Length = 715
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/488 (82%), Positives = 442/488 (90%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHD+LDDAFL+YDYI FGAGVADLV
Sbjct: 228 MRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDSLDDAFLTYDYIVGMFGAGVADLV 287
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLS LSKLARENNTASK+VEADRLHTMFL MADARAVLIKLADRLHNMMTLDALP+
Sbjct: 288 EGVSKLSHLSKLARENNTASKSVEADRLHTMFLGMADARAVLIKLADRLHNMMTLDALPV 347
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KRQRFAKETLEIF PLANRLGISTWK QLENLCFKHLNP H ELSSKLVE +D+AM+T
Sbjct: 348 AKRQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPSHHEELSSKLVESYDDAMIT 407
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIE+LE+ALKD+ IS+ V+ GRHKSLYS++CKMLKKKLT+D+IHDIYGLRLIV+ EEDC
Sbjct: 408 SAIERLEEALKDEGISYNVISGRHKSLYSVYCKMLKKKLTIDDIHDIYGLRLIVDKEEDC 467
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH+LW+EVPGK+KDYI RPKFNGYQSLHTVV GEG VPLEVQIRTK+MHLQAEF
Sbjct: 468 YKALTVVHRLWSEVPGKLKDYICRPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQAEF 527
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKE DCQHSSFVLQMVEWARWV+TWQCEAMS+D S VG DS+ PPC FPSHA
Sbjct: 528 GFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSRDCSSVGYADSVNPPCKFPSHA 587
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
DDCP+SYKP C +GPVFVIMIENDKMSVQEF +STV+DLL+R+GR SSR + Y FPLK
Sbjct: 588 DDCPYSYKPDCGQNGPVFVIMIENDKMSVQEFSANSTVLDLLKRSGRASSRLTTYRFPLK 647
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLNHK V DP KLKMGDV+ELTPAIPDKSLTEYREEIQRMY+RGL VS+ G A
Sbjct: 648 EELRPRLNHKPVSDPNSKLKMGDVIELTPAIPDKSLTEYREEIQRMYDRGLTVSSMGTAA 707
Query: 481 TSMVGSRS 488
++MVGSRS
Sbjct: 708 STMVGSRS 715
>gi|33637487|gb|AAQ23899.1| RSH2 [Nicotiana tabacum]
Length = 718
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/488 (81%), Positives = 444/488 (90%), Gaps = 3/488 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F++YDYIFRT GAGVADLV
Sbjct: 234 VRASGDPYLQHCVETAVLLAMIGANSTVVAAGLLHDTLDDTFMTYDYIFRTLGAGVADLV 293
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLAR+ NTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL
Sbjct: 294 EGVSKLSQLSKLARDFNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 353
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHLNPDQH ELSSKLV+ FDEAM+T
Sbjct: 354 AKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPDQHNELSSKLVKSFDEAMIT 413
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
S++ KLEQALKD ++S+ VL GRHKSLYSI+CKMLKKKL MDE+HDI+GLRLIVEN+EDC
Sbjct: 414 SSVGKLEQALKDDSVSYHVLSGRHKSLYSIYCKMLKKKLNMDEVHDIHGLRLIVENKEDC 473
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+ALRVVHQLW+EVPG+ KDYI PKFNGYQSLHTVV GEG+VPLEVQIRTKEMHLQAE+
Sbjct: 474 YKALRVVHQLWSEVPGRYKDYIANPKFNGYQSLHTVVLGEGMVPLEVQIRTKEMHLQAEY 533
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEG C+HSSFV QMVEWARWV+TWQCE M++D+S VG+ +SI+PPC FP+H+
Sbjct: 534 GFAAHWRYKEGACKHSSFVNQMVEWARWVVTWQCETMNRDQSSVGHTESIQPPCKFPAHS 593
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCPFS KP C DGPVF+IMI+NDKMSVQEFP +STV DLLERAGRGSSRW+PYGFPLK
Sbjct: 594 EDCPFSCKPNCGTDGPVFIIMIDNDKMSVQEFPANSTVKDLLERAGRGSSRWTPYGFPLK 653
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLNH+ V DP CKL+MGDV+ELTP IP KSLTEYREEIQRMY+RG++ PA
Sbjct: 654 EELRPRLNHEPVSDPNCKLRMGDVIELTPTIPHKSLTEYREEIQRMYDRGVS---PLPAA 710
Query: 481 TSMVGSRS 488
++VG RS
Sbjct: 711 NAVVGLRS 718
>gi|356519788|ref|XP_003528551.1| PREDICTED: uncharacterized protein LOC100789399 [Glycine max]
Length = 714
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/488 (82%), Positives = 441/488 (90%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHD+LDDAFL+YDYI FG GVADLV
Sbjct: 227 MRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDSLDDAFLTYDYIVGVFGTGVADLV 286
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLS LSKLARENNTASK+VEADRLHTMFL MADARAVL+KLADRLHNMMTLDALP
Sbjct: 287 EGVSKLSHLSKLARENNTASKSVEADRLHTMFLGMADARAVLVKLADRLHNMMTLDALPG 346
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHLNP QH ELSSKLVE +D+AM+T
Sbjct: 347 AKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPSQHEELSSKLVESYDDAMIT 406
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIE+LEQALKD+ IS+ V+ GRHKSLYSI+CKMLKKKLT+D+IHDIYGLRLIV+ EEDC
Sbjct: 407 SAIERLEQALKDEGISYNVISGRHKSLYSIYCKMLKKKLTIDDIHDIYGLRLIVDKEEDC 466
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH+LW+EVPGK+KDYI RPKFNGYQSLHTVV GEG VPLEVQIRTK+MHLQA+F
Sbjct: 467 YKALTVVHRLWSEVPGKLKDYICRPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQADF 526
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKE DCQHSSFVLQMVEWARWV+TWQCEAMS+D S VG DS+KPPC FPSHA
Sbjct: 527 GFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSRDCSSVGYADSVKPPCKFPSHA 586
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCP+SYKP C +GPVFVIMIENDKMSVQEF +STV+DLL+R+GR SSR + Y FPLK
Sbjct: 587 EDCPYSYKPDCGQNGPVFVIMIENDKMSVQEFSANSTVLDLLKRSGRASSRLTTYRFPLK 646
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLNHK V DP KLKMGDV+ELTPAIPDKSLTEYREEIQRMY+RGL VS+ G A
Sbjct: 647 EELRPRLNHKPVSDPNSKLKMGDVIELTPAIPDKSLTEYREEIQRMYDRGLTVSSMGTAA 706
Query: 481 TSMVGSRS 488
++M GSRS
Sbjct: 707 STMAGSRS 714
>gi|224070802|ref|XP_002303242.1| predicted protein [Populus trichocarpa]
gi|222840674|gb|EEE78221.1| predicted protein [Populus trichocarpa]
Length = 737
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/489 (82%), Positives = 441/489 (90%), Gaps = 2/489 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETA+LLA IGANS+VVAAGLLHD+LDD+FLSYDYIF+TFGAGVADLV
Sbjct: 250 MRASGDPYLEHCVETAVLLAIIGANSSVVAAGLLHDSLDDSFLSYDYIFKTFGAGVADLV 309
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNM+TLDALPL
Sbjct: 310 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMITLDALPL 369
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKET++IF PLANRLGISTWK QLE LCFKHLNPDQH LS++LVE FDEAM+
Sbjct: 370 VKQQRFAKETMQIFAPLANRLGISTWKEQLETLCFKHLNPDQHRHLSARLVESFDEAMIA 429
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
S EKL++AL D+ IS+ L GRHKSLYSIHCKM KKKL MD+IHDI+GLRLIVEN+EDC
Sbjct: 430 STKEKLDKALTDEAISY-NLHGRHKSLYSIHCKMSKKKLNMDQIHDIHGLRLIVENKEDC 488
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+ALRVVH LW+EVPG+ KDYIT PKFNGY+SLHTVV GEG VPLEVQIRTKEMHLQAEF
Sbjct: 489 YRALRVVHCLWSEVPGQFKDYITNPKFNGYRSLHTVVMGEGTVPLEVQIRTKEMHLQAEF 548
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC+HSSFVLQ+VEWARWV+TWQCE MSKDR +G DSIKPPCTFPSH+
Sbjct: 549 GFAAHWRYKEGDCKHSSFVLQVVEWARWVITWQCETMSKDRPSIGCDDSIKPPCTFPSHS 608
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
D CP+SYKP C DGP+F+IMIENDKMSVQEFP STVMDLLERAGR SSRWS YGFP+K
Sbjct: 609 DGCPYSYKPHCGQDGPIFIIMIENDKMSVQEFPADSTVMDLLERAGRASSRWSAYGFPVK 668
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLA-VSNTGPA 479
EELRPRLNH+ V D CKLKMGDVVELTPAIPDKSL++YREEIQRMYE G A VS+T PA
Sbjct: 669 EELRPRLNHRPVHDATCKLKMGDVVELTPAIPDKSLSDYREEIQRMYEHGSATVSSTAPA 728
Query: 480 VTSMVGSRS 488
V+ VG RS
Sbjct: 729 VSGTVGRRS 737
>gi|224054061|ref|XP_002298089.1| predicted protein [Populus trichocarpa]
gi|222845347|gb|EEE82894.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/470 (84%), Positives = 431/470 (91%), Gaps = 1/470 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD+F+SYD+IF+TFGAGVADLV
Sbjct: 248 MRASGDPYLQHCVETAVLLAIIGANSTVVAAGLLHDTLDDSFISYDHIFKTFGAGVADLV 307
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL
Sbjct: 308 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 367
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKET EIF PLANRLGIS+WK QLENLCFKHLNPDQH +LS++LV+ FDEAM+
Sbjct: 368 VKQQRFAKETSEIFAPLANRLGISSWKEQLENLCFKHLNPDQHKDLSARLVDSFDEAMIA 427
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SA EKLE+AL D+ IS+ L GRHKSLYS +CKMLKKKL MD+IHDI+GLRLIVEN EDC
Sbjct: 428 SAKEKLEKALTDEAISY-DLSGRHKSLYSTYCKMLKKKLNMDQIHDIHGLRLIVENNEDC 486
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+ALRVV +LW+EVPGK KDYI PKFNGY+SLHTVV GEG VPLEVQIRT+EMHLQAEF
Sbjct: 487 YRALRVVQRLWSEVPGKFKDYINNPKFNGYRSLHTVVMGEGTVPLEVQIRTREMHLQAEF 546
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGD +HSSFVLQMVEWARWV+TWQCE MSKD S +G GDSIKPPCTFPSH+
Sbjct: 547 GFAAHWRYKEGDSKHSSFVLQMVEWARWVITWQCETMSKDHSFIGCGDSIKPPCTFPSHS 606
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
D CP+SYKP C DGPVFVIMIE+DKMSVQEFP +STVMDLLERAGR SSRWSPYGFP+K
Sbjct: 607 DGCPYSYKPHCGQDGPVFVIMIESDKMSVQEFPANSTVMDLLERAGRTSSRWSPYGFPVK 666
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERG 470
EELRPRLNH+ V D CKLKMGDVVELTPAIPDKSL++YREEIQRMYERG
Sbjct: 667 EELRPRLNHRPVYDVTCKLKMGDVVELTPAIPDKSLSDYREEIQRMYERG 716
>gi|15081594|gb|AAK82651.1| RSH-like protein [Capsicum annuum]
Length = 721
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/488 (80%), Positives = 439/488 (89%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RA+GDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F++YDYIFRT GAGVADLV
Sbjct: 234 VRATGDPYLQHCVETAVLLATIGANSTVVAAGLLHDTLDDTFITYDYIFRTLGAGVADLV 293
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLAR+ NTASKTVEADRLHTMFLAM DARAVL+KLADRLHNM+TLDALP
Sbjct: 294 EGVSKLSQLSKLARDFNTASKTVEADRLHTMFLAMTDARAVLVKLADRLHNMITLDALPP 353
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGISTWK QLEN CFKHLNPDQH ELSSKL++ FDEAM+T
Sbjct: 354 MKQQRFAKETLEIFAPLANRLGISTWKEQLENQCFKHLNPDQHNELSSKLMDSFDEAMIT 413
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SA+ KLEQALKDK++S+ VL GRHKSLYSI+CKMLKKKL MDE+HDI+GLRLIVE EEDC
Sbjct: 414 SAVGKLEQALKDKSLSYHVLSGRHKSLYSIYCKMLKKKLNMDEVHDIHGLRLIVETEEDC 473
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL+VVHQLW EVPG+ KDYI +PK NGYQSLHTVV GEG+VPLEVQIRTKEMHLQAE+
Sbjct: 474 YKALQVVHQLWCEVPGRSKDYIAKPKCNGYQSLHTVVLGEGMVPLEVQIRTKEMHLQAEY 533
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKE DC+HSSFVLQMVEWARWV+TWQCE MS+D+S VG+ +SI+PPC FP+H+
Sbjct: 534 GFAAHWRYKEDDCKHSSFVLQMVEWARWVVTWQCETMSRDQSSVGHTESIQPPCKFPAHS 593
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCPFS KP C DGPVF+IMIENDKMSVQEF +STV DLLERAGRGSSRW+PYGFPLK
Sbjct: 594 EDCPFSCKPDCGTDGPVFIIMIENDKMSVQEFAANSTVKDLLERAGRGSSRWTPYGFPLK 653
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLNH+ V DP CKL+MGDV+ELTPAI KSLTEYREEIQRMY+RG++ A
Sbjct: 654 EELRPRLNHEPVSDPNCKLRMGDVIELTPAIRHKSLTEYREEIQRMYDRGVSPLPAAAAA 713
Query: 481 TSMVGSRS 488
++VG RS
Sbjct: 714 NTVVGLRS 721
>gi|37196706|dbj|BAC97801.1| RelA-SpoT like protein PsRSH1 [Pisum sativum]
Length = 729
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/487 (81%), Positives = 433/487 (88%), Gaps = 1/487 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDTLDDAFL+YDYIF FGAGVADLV
Sbjct: 242 MRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTLDDAFLTYDYIFGMFGAGVADLV 301
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
GVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP+
Sbjct: 302 GGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPV 361
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHLNP QH ELSSKLVE +D+AM+
Sbjct: 362 AKQQRFAKETLEIFAPLANRLGIANWKEQLENLCFKHLNPVQHMELSSKLVESYDDAMIA 421
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAI +LEQALKD+ IS+ V+ GRHKSLYSI+CKMLKKKLT+D+IHDIYGLRLIVE EEDC
Sbjct: 422 SAINRLEQALKDEGISYHVISGRHKSLYSIYCKMLKKKLTIDDIHDIYGLRLIVEKEEDC 481
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL+VVHQLW EVPGK+KDYI PKFNGYQSLHTVV GEG +PLEVQ+RTK+MH QAEF
Sbjct: 482 YKALKVVHQLWLEVPGKLKDYIRGPKFNGYQSLHTVVMGEGKIPLEVQVRTKDMHSQAEF 541
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKE CQ SS+VLQMVEWARWV+TWQCEAMSKD + VG DSIKP C FPSHA
Sbjct: 542 GFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGCVDSIKPYCKFPSHA 601
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
D+CP+SYKP C+ DGPVFVIMIENDKMSVQEF +STV+DLLERAGR S R + Y FPLK
Sbjct: 602 DNCPYSYKPDCAQDGPVFVIMIENDKMSVQEFCANSTVLDLLERAGRASCRLTTYRFPLK 661
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLNHK V DP CKLKMGDVVELTPAIPDK LTEYREEIQRMY+RGL VS G
Sbjct: 662 EELRPRLNHKPVSDPNCKLKMGDVVELTPAIPDKYLTEYREEIQRMYDRGLTVSKMGTTT 721
Query: 481 -TSMVGS 486
+SMVG+
Sbjct: 722 ASSMVGT 728
>gi|357514019|ref|XP_003627298.1| GTP pyrophosphokinase [Medicago truncatula]
gi|66947621|emb|CAJ00006.1| RelA-SpoT homolog 1 [Medicago truncatula]
gi|355521320|gb|AET01774.1| GTP pyrophosphokinase [Medicago truncatula]
Length = 726
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/488 (80%), Positives = 437/488 (89%), Gaps = 2/488 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDT+DDAFL+YDYI+ FGAGVADLV
Sbjct: 238 MRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTVDDAFLTYDYIYGMFGAGVADLV 297
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP+
Sbjct: 298 EGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPV 357
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHLNP QH ELSSKLVE +D+AM+
Sbjct: 358 AKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHLNPVQHKELSSKLVESYDDAMIA 417
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIE+LEQALKD+ IS+ V+ GRHKSLYS++CK+LKKKLT+D+IHDIYGLRLIV+ EEDC
Sbjct: 418 SAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKKLTIDDIHDIYGLRLIVDKEEDC 477
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL+VVH+LW+EV GK+KDYI PKFNGYQSLHTVV GEG VPLEVQ+RTK+MHLQAEF
Sbjct: 478 YKALKVVHRLWSEVHGKLKDYIRFPKFNGYQSLHTVVMGEGKVPLEVQVRTKDMHLQAEF 537
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKE CQ SS+VLQMVEWARWV+TWQCEAMSKD + VG DSIKPPC FPSHA
Sbjct: 538 GFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGYVDSIKPPCKFPSHA 597
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
D+CP+SYKP C+ DGPVFVIMIENDKMSVQEF +STV+DLLER GR S R + Y FPLK
Sbjct: 598 DNCPYSYKPDCAQDGPVFVIMIENDKMSVQEFCANSTVLDLLERVGRASCRLTTYRFPLK 657
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLNHK V DP CKLKMGDV+ELTPAIPDK LTEYREEIQRMY+RGL VS+ G
Sbjct: 658 EELRPRLNHKPVSDPNCKLKMGDVIELTPAIPDKYLTEYREEIQRMYDRGLTVSSMGSTA 717
Query: 481 T--SMVGS 486
T SMVG+
Sbjct: 718 TASSMVGT 725
>gi|157741797|gb|ABV69554.1| RelA/SpoT-like protein [Ipomoea nil]
Length = 727
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/488 (80%), Positives = 433/488 (88%), Gaps = 4/488 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F++Y+YI +FGAGVADLV
Sbjct: 244 MRASGDPYLQHCVETAVLLATIGANSTVVAAGLLHDTLDDTFVTYNYISLSFGAGVADLV 303
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLS LSKLAREN+TA+K VEADRLHTMFLAMADARAVLIKLADRLHNMMTLD+LP+
Sbjct: 304 EGVSKLSHLSKLARENDTANKIVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDSLPM 363
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGISTWK QLENLCFK+LNP QH EL+SKLV FDEAMVT
Sbjct: 364 IKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKYLNPVQHKELTSKLVTSFDEAMVT 423
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SA+EKLE+ALKD++IS+ L GRHKSLYSIH KM KKKL MDEIHDI+GLR+IVENEEDC
Sbjct: 424 SAVEKLERALKDESISYHSLSGRHKSLYSIHRKMSKKKLNMDEIHDIHGLRIIVENEEDC 483
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+A VVHQLW EVPGK KDYI PKFNGYQSLHTVVT EG+VPLEVQIRTKEMHLQAEF
Sbjct: 484 YKAATVVHQLWPEVPGKFKDYILHPKFNGYQSLHTVVTREGMVPLEVQIRTKEMHLQAEF 543
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW CEAMSKD+ + + DSIKPPC FPSH+
Sbjct: 544 GFAAHWRYKEGDCKHSSFVLQMVEWARWVITWHCEAMSKDQPSISHSDSIKPPCKFPSHS 603
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCPFS P+C DGPV+VIMIENDKMSVQE STVMDLLE+AGRGSSRW PYGFP+K
Sbjct: 604 EDCPFSCIPECGADGPVYVIMIENDKMSVQELAAHSTVMDLLEKAGRGSSRWIPYGFPVK 663
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLNH + DP CKLKMGDV+ELTPAIPDKSLTEYREEIQRMY+RG V+ +
Sbjct: 664 EELRPRLNHSPIIDPTCKLKMGDVIELTPAIPDKSLTEYREEIQRMYDRGPNVATS---- 719
Query: 481 TSMVGSRS 488
T+M G RS
Sbjct: 720 TTMAGLRS 727
>gi|145336732|ref|NP_564652.2| RELA/SPOT homolog 3 [Arabidopsis thaliana]
gi|4587556|gb|AAD25787.1|AC006577_23 Similar to gi|1653162 (p)ppGpp 3-pyrophosphohydrolase from
Synechocystis sp genome gb|D90911. EST gb|W43807 comes
from this gene [Arabidopsis thaliana]
gi|110742595|dbj|BAE99211.1| RSH3 [Arabidopsis thaliana]
gi|332194932|gb|AEE33053.1| RELA/SPOT homolog 3 [Arabidopsis thaliana]
Length = 715
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/486 (80%), Positives = 430/486 (88%), Gaps = 4/486 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLDD+F+SYDYI RTFG+GVADLV
Sbjct: 230 MRATGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDSFMSYDYILRTFGSGVADLV 289
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNMMTL ALP
Sbjct: 290 EGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLYALPP 349
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KRQRFAKETLEIF PLANRLGIS+WKV+LENLCFKHL+PDQH E+S L + FDEAM+T
Sbjct: 350 VKRQRFAKETLEIFAPLANRLGISSWKVKLENLCFKHLHPDQHHEMSDMLEDSFDEAMIT 409
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIEKLEQALK + IS+ V+ GRHKSLYSI+CKMLKKKLTMDEIHDI+GLRLIV+NE+DC
Sbjct: 410 SAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTMDEIHDIHGLRLIVDNEKDC 469
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH+LW+EVPGK+KDYI+ PKFNGYQSLHTVV G+G +PLEVQIRTKEMHLQAEF
Sbjct: 470 YKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPLEVQIRTKEMHLQAEF 529
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKD S + S +P C+FPSHA
Sbjct: 530 GFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDGSSIC---SSEPLCSFPSHA 586
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCPFSYKP + +GPV+VI+IEN+KM+VQEFP +STV DLL RAG GSSRWS Y P K
Sbjct: 587 EDCPFSYKPSGNQEGPVYVIVIENEKMTVQEFPENSTVSDLLRRAGPGSSRWSMYSIPAK 646
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQRMY+RGLA S A
Sbjct: 647 EELRPRLNQTPVSDLKCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGLAFSRPHRAA 706
Query: 481 T-SMVG 485
T +MVG
Sbjct: 707 TGTMVG 712
>gi|297847822|ref|XP_002891792.1| hypothetical protein ARALYDRAFT_892466 [Arabidopsis lyrata subsp.
lyrata]
gi|297337634|gb|EFH68051.1| hypothetical protein ARALYDRAFT_892466 [Arabidopsis lyrata subsp.
lyrata]
Length = 715
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/486 (79%), Positives = 430/486 (88%), Gaps = 4/486 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLDD+F+SYDYI RTFG+GVADLV
Sbjct: 230 MRANGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDSFMSYDYILRTFGSGVADLV 289
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNMMTL ALP
Sbjct: 290 EGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLYALPP 349
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGIS+WKV+LEN+CFKHL PDQH E+S L + F+EAM+T
Sbjct: 350 VKQQRFAKETLEIFAPLANRLGISSWKVELENMCFKHLYPDQHHEMSDMLEDSFNEAMIT 409
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAI KLEQALK + IS+ VL GRHKSLYSI+CKMLKKKLTMDEIHDI+GLRLIV+NE+DC
Sbjct: 410 SAIGKLEQALKKEGISYHVLSGRHKSLYSIYCKMLKKKLTMDEIHDIHGLRLIVDNEKDC 469
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH+LW+EVPGK+KDYI+ PKFNGYQSLHTVV G+G +PLEVQIRTKEMHLQAEF
Sbjct: 470 YKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPLEVQIRTKEMHLQAEF 529
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKDRS + S +P C+FPSHA
Sbjct: 530 GFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDRSSIC---SSEPLCSFPSHA 586
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCPFSYKP + +GPV+VI+IEN+KM+VQEFP +STV+DLL RAG GSSRWS Y P K
Sbjct: 587 EDCPFSYKPNGNQEGPVYVIVIENEKMTVQEFPANSTVLDLLSRAGPGSSRWSMYSIPAK 646
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNT-GPA 479
EELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQRMY+RGLA S + A
Sbjct: 647 EELRPRLNQTPVNDLKCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGLAFSRSHSAA 706
Query: 480 VTSMVG 485
+MVG
Sbjct: 707 AGTMVG 712
>gi|28268682|dbj|BAC56909.1| RelA homolog [Suaeda japonica]
Length = 708
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/490 (76%), Positives = 432/490 (88%), Gaps = 2/490 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASG PYL HC+ETA+LLA+IGAN+TVVAAGLLHDT+DD+F++YDYI FG+GVADLV
Sbjct: 219 VRASGHPYLHHCMETAVLLASIGANATVVAAGLLHDTIDDSFVTYDYILNIFGSGVADLV 278
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
GVSKLS LSKLARENNTASKT+EADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP
Sbjct: 279 NGVSKLSHLSKLARENNTASKTIEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPS 338
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHL P+Q+ ELSSKLV+ FD+A +
Sbjct: 339 HKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLYPNQYDELSSKLVKSFDQARIQ 398
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAI+KLE+ LKD+++S+ L GRHKSLYSIHCKM KKKLTMD+IHDI+GLRLIVENE+DC
Sbjct: 399 SAIDKLEEGLKDEDLSYHDLSGRHKSLYSIHCKMSKKKLTMDQIHDIHGLRLIVENEDDC 458
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
++AL+VVHQLW+EVPGK KDYI PK NGYQSLHTVV GEG+VPLEVQIRTKEMHLQAE+
Sbjct: 459 FRALKVVHQLWSEVPGKFKDYIHCPKCNGYQSLHTVVVGEGMVPLEVQIRTKEMHLQAEY 518
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEG+ +HSSFVLQMVEWARWV+ WQCE M+KDRS G DS+K PC FP+H+
Sbjct: 519 GFAAHWRYKEGESKHSSFVLQMVEWARWVVNWQCETMNKDRSSFGYVDSLKSPCKFPTHS 578
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+ CP+SY PQ +HDGPVFVI+IEN+KMSV+EFP +ST+MDLLE G GS RW+ +GFP+K
Sbjct: 579 EGCPYSYNPQPNHDGPVFVILIENEKMSVKEFPLNSTMMDLLEATGHGSPRWTTHGFPVK 638
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
E+LRPRLNH V DP CKLKMGDV+ELTPA+PDKSL EYREEIQRMY RGL+VS PA
Sbjct: 639 EDLRPRLNHFPVSDPTCKLKMGDVIELTPALPDKSLIEYREEIQRMYNRGLSVSTPAPAA 698
Query: 481 --TSMVGSRS 488
TS+ G RS
Sbjct: 699 TNTSVAGWRS 708
>gi|7141308|gb|AAF37283.1|AF225704_1 RSH3 [Arabidopsis thaliana]
Length = 712
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/486 (79%), Positives = 427/486 (87%), Gaps = 7/486 (1%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLDD+F+SYDYI RTFG+GVADLV
Sbjct: 230 MRATGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDSFMSYDYILRTFGSGVADLV 289
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVS QLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNMMTL ALP
Sbjct: 290 EGVS---QLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLYALPP 346
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KRQRFAKETLEIF PLANRLGIS+WKV+LENLCFKHL+PDQH E+S L + FDEAM+T
Sbjct: 347 VKRQRFAKETLEIFAPLANRLGISSWKVKLENLCFKHLHPDQHHEMSDMLEDSFDEAMIT 406
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIEKLEQALK + IS+ V+ GRHKSLYSI+CKMLKKKLTMDEIHDI+GLRLIV+NE+DC
Sbjct: 407 SAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTMDEIHDIHGLRLIVDNEKDC 466
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH+LW+EVPGK+KDYI+ PKFNGYQSLHTVV G+G +PLEVQIRTKEMHLQAEF
Sbjct: 467 YKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPLEVQIRTKEMHLQAEF 526
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKD S + S +P C+FPSHA
Sbjct: 527 GFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDGSSIC---SSEPLCSFPSHA 583
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCPFSYKP + +GPV+VI+IEN+KMSVQEFP +STV DLL RAG GSSRWS Y P K
Sbjct: 584 EDCPFSYKPSGNQEGPVYVIVIENEKMSVQEFPENSTVSDLLRRAGPGSSRWSMYSIPAK 643
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQRMY+RGLA S A
Sbjct: 644 EELRPRLNQTPVSDLKCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGLAFSRPHRAA 703
Query: 481 T-SMVG 485
T +MVG
Sbjct: 704 TGTMVG 709
>gi|449480518|ref|XP_004155918.1| PREDICTED: uncharacterized LOC101204461 [Cucumis sativus]
Length = 734
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/480 (77%), Positives = 427/480 (88%), Gaps = 1/480 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETAMLLA IGANSTVVAAGLLHD LDD+F+ YDYI + GAGVADLV
Sbjct: 244 MRASGDPYLQHCVETAMLLATIGANSTVVAAGLLHDALDDSFMCYDYILGSVGAGVADLV 303
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
E VS+LS LSKLARENNTA+KTVEADRLHTMFLAMAD RAVL+KLADRLHNMMTLDALPL
Sbjct: 304 EEVSQLSHLSKLARENNTANKTVEADRLHTMFLAMADTRAVLVKLADRLHNMMTLDALPL 363
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KR RFAKET+EIFVPLANRLGI +WK QLENLCFKHL+P++H ELSSKLV+ FD +T
Sbjct: 364 TKRLRFAKETMEIFVPLANRLGILSWKEQLENLCFKHLHPEEHKELSSKLVDSFDSERIT 423
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIEKL+QALK++ IS+ +L GR+KSLYSI+ KML+KKLTMDEIHDI+G+RLIV+NEEDC
Sbjct: 424 SAIEKLDQALKNEGISYHLLSGRNKSLYSIYLKMLRKKLTMDEIHDIHGIRLIVKNEEDC 483
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
+ALR+VHQLW+EVPG+ KDYI+RPKFNGY+SLHTVV GE + LEVQIRTKEMHLQAEF
Sbjct: 484 QKALRIVHQLWSEVPGRCKDYISRPKFNGYRSLHTVVVGEDMAHLEVQIRTKEMHLQAEF 543
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
G AAHWRYKEGD ++S FV+QMVEWARWV+TWQC +MSKD S V + DSI+PPC FPSH+
Sbjct: 544 GIAAHWRYKEGDSEYSPFVVQMVEWARWVVTWQCLSMSKDGSSVDSADSIRPPCKFPSHS 603
Query: 361 DDCPFSYKPQC-SHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPL 419
+ CP+SYK QC DGPVFVI IENDKMSVQEFP +ST+ +L+ER GRGS+RW+ +GFP+
Sbjct: 604 EGCPYSYKTQCDGQDGPVFVITIENDKMSVQEFPANSTITNLMERCGRGSARWTSHGFPM 663
Query: 420 KEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPA 479
KE+LRPR+NHK V DP CKLKMGDVVELTP IPDKSLTEYREEIQRMY+RG+ VSN+GP+
Sbjct: 664 KEDLRPRVNHKRVNDPTCKLKMGDVVELTPTIPDKSLTEYREEIQRMYDRGITVSNSGPS 723
>gi|297834248|ref|XP_002885006.1| hypothetical protein ARALYDRAFT_897663 [Arabidopsis lyrata subsp.
lyrata]
gi|297330846|gb|EFH61265.1| hypothetical protein ARALYDRAFT_897663 [Arabidopsis lyrata subsp.
lyrata]
Length = 714
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/485 (81%), Positives = 427/485 (88%), Gaps = 4/485 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETAMLLA IGA+STVV AGLLHDT+DD+F+SYDYI R FGAGVADLV
Sbjct: 231 MRASGDPYLQHCVETAMLLANIGASSTVVVAGLLHDTMDDSFMSYDYILRNFGAGVADLV 290
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM TL AL
Sbjct: 291 EGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMKTLYALSP 350
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P+QH E+S+ L + FDEAM+T
Sbjct: 351 VKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDSFDEAMIT 410
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIEKLEQALK + IS+ VLCGRHKSLYSI+ KMLKKKLT+DEIHDI+GLRLIV+NE DC
Sbjct: 411 SAIEKLEQALKKEGISYHVLCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLRLIVDNEGDC 470
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH LW+EVPGK+KDYIT PKFNGYQSLHTVV G VPLEVQIRT+EMHLQAEF
Sbjct: 471 YKALGVVHSLWSEVPGKLKDYITHPKFNGYQSLHTVVMDNGTVPLEVQIRTQEMHLQAEF 530
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC++SSFVLQMVEWARWV+TW CEAMSKDRS + + DSIKPPC FPSH+
Sbjct: 531 GFAAHWRYKEGDCKYSSFVLQMVEWARWVVTWHCEAMSKDRSSISSSDSIKPPCKFPSHS 590
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCP SYKP S DGPV+VI+IENDKMSVQEFP SSTV DLL RAG GSSRWS YG P K
Sbjct: 591 EDCPASYKPNSSQDGPVYVIVIENDKMSVQEFPASSTVSDLLSRAGPGSSRWSMYGIPAK 650
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLN + V D + KLKMGDVVELTP IPD+SLTEYREEIQRMY+RGLA S G
Sbjct: 651 EELRPRLNQRPVSDLKWKLKMGDVVELTPTIPDESLTEYREEIQRMYDRGLAFSRPG--- 707
Query: 481 TSMVG 485
+MVG
Sbjct: 708 -TMVG 711
>gi|449447898|ref|XP_004141703.1| PREDICTED: uncharacterized protein LOC101204461 [Cucumis sativus]
Length = 738
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/484 (76%), Positives = 427/484 (88%), Gaps = 5/484 (1%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETAMLLA IGANSTVVAAGLLHD LDD+F+ YDYI + GAGVADLV
Sbjct: 244 MRASGDPYLQHCVETAMLLATIGANSTVVAAGLLHDALDDSFMCYDYILGSVGAGVADLV 303
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
E VS+LS LSKLARENNTA+KTVEADRLHTMFLAMAD RAVL+KLADRLHNMMTLDALPL
Sbjct: 304 EEVSQLSHLSKLARENNTANKTVEADRLHTMFLAMADTRAVLVKLADRLHNMMTLDALPL 363
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KR RFAKET+EIFVPLANRLGI +WK QLENLCFKHL+P++H ELSSKLV+ FD +T
Sbjct: 364 TKRLRFAKETMEIFVPLANRLGILSWKEQLENLCFKHLHPEEHKELSSKLVDSFDSERIT 423
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIEKL+QALK++ IS+ +L GR+KSLYSI+ KML+KKLTMDEIHDI+G+RLIV+NEEDC
Sbjct: 424 SAIEKLDQALKNEGISYHLLSGRNKSLYSIYLKMLRKKLTMDEIHDIHGIRLIVKNEEDC 483
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
+ALR+VHQLW+EVPG+ KDYI+RPKFNGY+SLHTVV GE + LEVQIRTKEMHLQAEF
Sbjct: 484 QKALRIVHQLWSEVPGRCKDYISRPKFNGYRSLHTVVVGEDMAHLEVQIRTKEMHLQAEF 543
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
G AAHWRYKEGD ++S FV+QMVEWARWV+TWQC +MSKD S V + DSI+PPC FPSH+
Sbjct: 544 GIAAHWRYKEGDSEYSPFVVQMVEWARWVVTWQCLSMSKDGSSVDSADSIRPPCKFPSHS 603
Query: 361 DDCPFSYKPQC-SHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPL 419
+ CP+SYK QC DGPVFVI IENDKMSVQEFP +ST+ +L+ER GRGS+RW+ +GFP+
Sbjct: 604 EGCPYSYKTQCDGQDGPVFVITIENDKMSVQEFPANSTITNLMERCGRGSARWTSHGFPM 663
Query: 420 KEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQ----RMYERGLAVSN 475
KE+LRPR+NHK V DP CKLKMGDVVELTP IPDKSLTEYREEIQ RMY+RG+ VSN
Sbjct: 664 KEDLRPRVNHKRVNDPTCKLKMGDVVELTPTIPDKSLTEYREEIQRMYDRMYDRGITVSN 723
Query: 476 TGPA 479
+GP+
Sbjct: 724 SGPS 727
>gi|15231772|ref|NP_188021.1| RelA-SpoT like protein RSH2 [Arabidopsis thaliana]
gi|11994378|dbj|BAB02337.1| unnamed protein product [Arabidopsis thaliana]
gi|332641938|gb|AEE75459.1| RelA-SpoT like protein RSH2 [Arabidopsis thaliana]
Length = 709
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/485 (80%), Positives = 423/485 (87%), Gaps = 4/485 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD+F+SYDYI R FGAGVADLV
Sbjct: 226 MRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTIDDSFMSYDYILRNFGAGVADLV 285
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM TL AL
Sbjct: 286 EGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMKTLYALSP 345
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P+QH E+S+ L + FDEAM+T
Sbjct: 346 VKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDSFDEAMIT 405
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIEKLEQALK IS+ VLCGRHKSLYSI+ KMLKKKLT+DEIHDI+GLRLIV+NE DC
Sbjct: 406 SAIEKLEQALKKAGISYHVLCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLRLIVDNEGDC 465
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH LW+EVPGK+KDYIT PKFNGYQSLHTVV G VPLEVQIRT+EMHLQAEF
Sbjct: 466 YKALGVVHSLWSEVPGKLKDYITHPKFNGYQSLHTVVMDNGTVPLEVQIRTQEMHLQAEF 525
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEG C++SSFVLQMVEWARWV+TW CEAMSKDRS + + DSIKPPC FPSH+
Sbjct: 526 GFAAHWRYKEGGCKYSSFVLQMVEWARWVVTWHCEAMSKDRSSISSSDSIKPPCKFPSHS 585
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCP SYKP S DGPV+VI+IENDKMSVQEFP SSTV DLL RAG GSSRWS YG P K
Sbjct: 586 EDCPASYKPNSSQDGPVYVIVIENDKMSVQEFPASSTVSDLLSRAGPGSSRWSMYGIPAK 645
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLN V D + KLKMGDVVELTP IPD+SLTEYREEIQRMY+RGLA S G
Sbjct: 646 EELRPRLNQIPVSDLKWKLKMGDVVELTPTIPDESLTEYREEIQRMYDRGLAFSRPG--- 702
Query: 481 TSMVG 485
+MVG
Sbjct: 703 -TMVG 706
>gi|449461673|ref|XP_004148566.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
gi|449528710|ref|XP_004171346.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
Length = 733
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/479 (76%), Positives = 422/479 (88%), Gaps = 3/479 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASGDPYL HCVETA++LA +GANSTVVAAGLLHDT+DD+F+++DYI TFGA VADLV
Sbjct: 254 LRASGDPYLEHCVETAVMLALVGANSTVVAAGLLHDTIDDSFVTHDYILGTFGAEVADLV 313
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLS LSKLARE++TA +TVEADRLHTMFLAMADARAVL+KLADRLHNMMTLDALP
Sbjct: 314 EGVSKLSHLSKLAREHDTAERTVEADRLHTMFLAMADARAVLVKLADRLHNMMTLDALPP 373
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKET+EIFVPLANRLGI TWK QLEN+CFKHLN +QH +LSSKL+ +DEA++
Sbjct: 374 IKQQRFAKETMEIFVPLANRLGIYTWKEQLENMCFKHLNLEQHEDLSSKLLGLYDEAIIF 433
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SA +KLE+ALKDK IS+ V+ GRHKS+YSIH KMLKK LT++EIHDI+GLRLIVENEEDC
Sbjct: 434 SATQKLERALKDKGISYHVVTGRHKSVYSIHRKMLKKNLTVNEIHDIHGLRLIVENEEDC 493
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+ALR+VHQLW VPGK+KDYI++PK NGYQS+HTVV GEG VPLEVQIRTKEMHLQAEF
Sbjct: 494 YEALRIVHQLWPNVPGKLKDYISKPKLNGYQSIHTVVRGEGDVPLEVQIRTKEMHLQAEF 553
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGD +HSSFVLQMVEWARWVLTW CE M+KDR +G S++PPC FP H+
Sbjct: 554 GFAAHWRYKEGDSKHSSFVLQMVEWARWVLTWHCETMNKDRPSIG---SVRPPCKFPFHS 610
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
DC +SYKP+ DGP+FVIMIEN+KMSVQEFP +T+MDLLERAGRGS+RW+ Y FP+K
Sbjct: 611 SDCSYSYKPRYFQDGPLFVIMIENEKMSVQEFPADATMMDLLERAGRGSTRWAHYRFPMK 670
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPA 479
EELRPRLNH+ V DP+CKLKMGDVVELTP IPDK L EYREEIQRMYE G V+ PA
Sbjct: 671 EELRPRLNHEPVSDPKCKLKMGDVVELTPPIPDKLLVEYREEIQRMYEGGFTVATPQPA 729
>gi|115476746|ref|NP_001061969.1| Os08g0457600 [Oryza sativa Japonica Group]
gi|33354141|dbj|BAC81140.1| plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
gi|42408400|dbj|BAD09583.1| plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
gi|113623938|dbj|BAF23883.1| Os08g0457600 [Oryza sativa Japonica Group]
gi|215694336|dbj|BAG89329.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704598|dbj|BAG94226.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201251|gb|EEC83678.1| hypothetical protein OsI_29472 [Oryza sativa Indica Group]
gi|222640676|gb|EEE68808.1| hypothetical protein OsJ_27564 [Oryza sativa Japonica Group]
Length = 718
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/482 (74%), Positives = 420/482 (87%), Gaps = 5/482 (1%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDPYL HCVETA+LLA IGAN+TVV+AGLLHDT+DD+F+ YD IFR FGAGVADLVE
Sbjct: 237 RASGDPYLQHCVETAVLLAKIGANATVVSAGLLHDTIDDSFMDYDQIFRMFGAGVADLVE 296
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+TVEADRLHTMFLAMADARAVLIKLADRLHNM T++ALPL
Sbjct: 297 GVSKLSHLSKLARDNNTASRTVEADRLHTMFLAMADARAVLIKLADRLHNMKTIEALPLV 356
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET+EIFVPLANRLGI++WK QLEN+CFKHLNP++H ELSSKLV FDEA++TS
Sbjct: 357 KQQRFAKETMEIFVPLANRLGIASWKDQLENICFKHLNPEEHKELSSKLVISFDEALLTS 416
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
++KL++ L+D+ IS+ L GRHKSLYSI+ KM+KK LTMD++HDI+GLRL+V+ E+DCY
Sbjct: 417 TLDKLDKGLRDEGISYHSLSGRHKSLYSIYSKMIKKNLTMDDVHDIHGLRLVVDTEQDCY 476
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 301
QAL +VH+LW V G+ KDYI PK NGY+SLHTV+ EG+ P EVQIRTKEMHLQAE+G
Sbjct: 477 QALDIVHKLWPRVAGRFKDYILHPKLNGYRSLHTVIMCEGIHPFEVQIRTKEMHLQAEYG 536
Query: 302 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSC-VGNGDSIKPPCTFPSHA 360
FAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAMSK+RS +G D+I+PPC FPSH+
Sbjct: 537 FAAHWRYKEGGCKH-SFVLQMVEWARWVLTWQCEAMSKERSSGLGRSDAIRPPCPFPSHS 595
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCP+SY QC+HDGP+FVIM+E+DKMSVQE P +STV+DL+ER G S R SPY FPLK
Sbjct: 596 EDCPYSYTRQCNHDGPIFVIMLEHDKMSVQELPANSTVVDLMERVGANSPRCSPYSFPLK 655
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERG---LAVSNTG 477
EELRPR+NHK + DP KL MGDVVELTPA+P KSLTEYREEIQRMYERG LA + G
Sbjct: 656 EELRPRVNHKPISDPNRKLCMGDVVELTPALPHKSLTEYREEIQRMYERGGFALATTRDG 715
Query: 478 PA 479
PA
Sbjct: 716 PA 717
>gi|7141306|gb|AAF37282.1|AF225703_1 RSH2 [Arabidopsis thaliana]
Length = 710
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/486 (79%), Positives = 416/486 (85%), Gaps = 5/486 (1%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD+F+SYDYI R FGAGVADLV
Sbjct: 226 MRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTVDDSFMSYDYILRNFGAGVADLV 285
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLARENNTA KTVEADRLH MFLAMADARAVLIKLADRLHNM TL AL
Sbjct: 286 EGVSKLSQLSKLARENNTACKTVEADRLHPMFLAMADARAVLIKLADRLHNMKTLYALSP 345
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLAN LGISTWKVQLENLCFKHL P+QH E+S+ L + FDEAM+T
Sbjct: 346 VKQQRFAKETLEIFAPLANCLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDSFDEAMIT 405
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIEKL+QALK IS+ VLCGRHKSLYSI+ KMLKKKLT+DEIHDI+GLRLIV+NE DC
Sbjct: 406 SAIEKLDQALKKAGISYHVLCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLRLIVDNEGDC 465
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH LW+EVPGK+KDYIT PKFNGYQSLHTVV G VPLEVQIRT+EMHLQAEF
Sbjct: 466 YKALGVVHSLWSEVPGKLKDYITHPKFNGYQSLHTVVMDNGTVPLEVQIRTQEMHLQAEF 525
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPC-TFPSH 359
GFAAHWRYKEG C++SSFVLQMVEWARWV+TW CEAMSKDRS + + DSIKPP F
Sbjct: 526 GFAAHWRYKEGGCKYSSFVLQMVEWARWVVTWHCEAMSKDRSSISSSDSIKPPLQVFRLT 585
Query: 360 ADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPL 419
+DCP SYKP S DGPV+VI+IENDKMSVQEFP SSTV DLL RAG GSSRWS YG P
Sbjct: 586 LEDCPASYKPNSSQDGPVYVIVIENDKMSVQEFPASSTVSDLLSRAGPGSSRWSMYGIPA 645
Query: 420 KEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPA 479
KEELRPRLN V D + KLKMGDVVELTP IPD+SLTEYREEIQRMY+RGLA S G
Sbjct: 646 KEELRPRLNQIPVSDLKWKLKMGDVVELTPKIPDESLTEYREEIQRMYDRGLAFSRPG-- 703
Query: 480 VTSMVG 485
+MVG
Sbjct: 704 --TMVG 707
>gi|125605857|gb|EAZ44893.1| hypothetical protein OsJ_29534 [Oryza sativa Japonica Group]
Length = 1130
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/478 (72%), Positives = 413/478 (86%), Gaps = 3/478 (0%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDPYL HCVETA+LLA IGANSTVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVE
Sbjct: 649 RASGDPYLQHCVETAVLLANIGANSTVVSAGLLHDTIDDSFIDYDHIFHMFGAGVADLVE 708
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL
Sbjct: 709 GVSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADARAVLIKLADRVHNMKTLEALPLG 768
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H +LSSKL + FDE ++TS
Sbjct: 769 KQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKDLSSKLTKSFDEVLITS 828
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
A++KL++ L+D +S+ L GRHKSLYSIH KMLKK LTMDEIHDI+GLRL+ E EEDCY
Sbjct: 829 AVDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKNLTMDEIHDIHGLRLVFEKEEDCY 888
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 301
+AL VVH+LW +VPG+ KDYI+RPK NGY+SLHTVV E + P EVQIRTKEMHLQAE+G
Sbjct: 889 RALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVMSENVHPFEVQIRTKEMHLQAEYG 948
Query: 302 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSHA 360
FAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAM+K+R + +G+ D+I+PPC FP H+
Sbjct: 949 FAAHWRYKEGTCRH-SFVLQMVEWARWVLTWQCEAMNKERPASLGDSDAIRPPCPFPMHS 1007
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCP+SY QC HDGP+FVI++E+DKMSVQEF +STVM+L++R G + RWSPY P+K
Sbjct: 1008 EDCPYSYTRQCDHDGPIFVILLEHDKMSVQEFQANSTVMNLMDRVGTNTPRWSPYRIPMK 1067
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYER-GLAVSNTG 477
E+LRP++NH+ + D KL MGDVVELTPA+P +SL YREEIQRMY+R G A++ G
Sbjct: 1068 EDLRPKVNHEPISDLNRKLSMGDVVELTPALPHESLPNYREEIQRMYDRGGFALATRG 1125
>gi|357148012|ref|XP_003574588.1| PREDICTED: GTP pyrophosphokinase-like [Brachypodium distachyon]
Length = 711
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/482 (72%), Positives = 415/482 (86%), Gaps = 5/482 (1%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDPYL HCVETA+LLA IGAN+TVV+AGLLHDT+DD+F+ YD+IFR FGAGVADLVE
Sbjct: 230 RASGDPYLQHCVETAVLLAKIGANATVVSAGLLHDTIDDSFMDYDHIFRMFGAGVADLVE 289
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+TVEADRLHTMFLAMADARAVLIKLADRLHNM T++ALP
Sbjct: 290 GVSKLSHLSKLARDNNTASRTVEADRLHTMFLAMADARAVLIKLADRLHNMKTIEALPFV 349
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET+EIFVPLANRLGI++WK QLEN+CFKHLNP++H ELSSKLV FDEA++TS
Sbjct: 350 KQQRFAKETMEIFVPLANRLGIASWKEQLENICFKHLNPEEHKELSSKLVISFDEALLTS 409
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
++KL++ L+D+ IS+ + GRHKSLYSI+ KM+KK LTMD++HDI+GLRL+VE E+DCY
Sbjct: 410 TLDKLDKGLRDEGISYHSVSGRHKSLYSIYSKMIKKNLTMDDVHDIHGLRLVVETEKDCY 469
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 301
+AL +VH+LW V G+ KDYI PK NGY+SLHTV+ EG+ P EVQIRTKEMHLQAEFG
Sbjct: 470 RALDIVHKLWPGVSGRFKDYILHPKVNGYRSLHTVILCEGVHPFEVQIRTKEMHLQAEFG 529
Query: 302 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSHA 360
FAAHWRYKEG C+H +FVLQMVEWARWVLTWQCEAMSK+R S + + DS+K C FP H+
Sbjct: 530 FAAHWRYKEGGCRH-AFVLQMVEWARWVLTWQCEAMSKERPSGLVSSDSVKSSCPFPLHS 588
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
++CP+SY QC+HDGP+FVIM+E+DKMSVQE P +ST+++L+ER S RWSPY FPLK
Sbjct: 589 EECPYSYTRQCNHDGPIFVIMLEHDKMSVQELPANSTIVNLMERVSASSPRWSPYSFPLK 648
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERG---LAVSNTG 477
EELRPR+NH+ + DP L MGDVVELTPA+P KSLTEYREEIQRMYERG LA +
Sbjct: 649 EELRPRVNHQPISDPNRTLCMGDVVELTPALPHKSLTEYREEIQRMYERGGFALATTRGA 708
Query: 478 PA 479
PA
Sbjct: 709 PA 710
>gi|357158631|ref|XP_003578190.1| PREDICTED: GTP pyrophosphokinase-like [Brachypodium distachyon]
Length = 708
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/487 (71%), Positives = 418/487 (85%), Gaps = 8/487 (1%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDP+L HCVETA+LLA IGANSTVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVE
Sbjct: 224 RASGDPFLQHCVETAVLLAKIGANSTVVSAGLLHDTIDDSFVDYDHIFHMFGAGVADLVE 283
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+T EADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL
Sbjct: 284 GVSKLSHLSKLARDNNTASRTAEADRLHTMLLAMADARAVLIKLADRVHNMKTLEALPLV 343
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP+++TELSSKL E FDEA++TS
Sbjct: 344 KQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEYTELSSKLTETFDEALITS 403
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
A++ L++ L++ +S+ L GRHK+LYS++ KMLKK LTMDE+HDI+GLRL+V+ EEDCY
Sbjct: 404 AVDTLDEGLREAGVSYRNLSGRHKNLYSVYSKMLKKNLTMDEVHDIHGLRLVVDKEEDCY 463
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 301
QAL VVH+LW +V G+ KDYI+RPK NGY+SLHTVV EG+ P EVQIRTKEMHLQAE+G
Sbjct: 464 QALEVVHKLWPQVTGRFKDYISRPKLNGYRSLHTVVLSEGVHPFEVQIRTKEMHLQAEYG 523
Query: 302 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSHA 360
FAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAM+K+ SC N D+I+PPC FP H+
Sbjct: 524 FAAHWRYKEGSCRH-SFVLQMVEWARWVLTWQCEAMNKEHSSCQVNSDAIRPPCPFPLHS 582
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
++C +SY QC+H+GP+FVI++E+DKMSVQEFP STVMDL++R G S RWSPY P+K
Sbjct: 583 EECAYSYTRQCNHEGPLFVILLEHDKMSVQEFPAGSTVMDLMDRVGANSPRWSPYSVPMK 642
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
E+LRP++NH+ + + R L MGDVVELTPA+PDKSLTEYREEIQRMY+ G G A+
Sbjct: 643 EDLRPKVNHEPISNLRRPLGMGDVVELTPALPDKSLTEYREEIQRMYDCG------GFAL 696
Query: 481 TSMVGSR 487
+ GSR
Sbjct: 697 AATRGSR 703
>gi|242044820|ref|XP_002460281.1| hypothetical protein SORBIDRAFT_02g025940 [Sorghum bicolor]
gi|241923658|gb|EER96802.1| hypothetical protein SORBIDRAFT_02g025940 [Sorghum bicolor]
Length = 712
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/478 (73%), Positives = 415/478 (86%), Gaps = 3/478 (0%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PYL HCVETA+LLA IGAN+TVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVE
Sbjct: 230 RASGEPYLQHCVETAVLLAKIGANATVVSAGLLHDTIDDSFIDYDHIFHMFGAGVADLVE 289
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+TVEADRLHTM LAMADARAVLIKLADRLHNM TL+AL L
Sbjct: 290 GVSKLSHLSKLARDNNTASRTVEADRLHTMLLAMADARAVLIKLADRLHNMKTLEALSLV 349
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET EIFVPLANRLGI++WK QLENLCFK+LNP+++ ELSSKL E FDE ++TS
Sbjct: 350 KQQRFAKETKEIFVPLANRLGIASWKDQLENLCFKYLNPEEYKELSSKLTESFDEELITS 409
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
A+ KL++ L+D +S+ L GRHKSLYSIH KMLKK LTM+EIHDI+GLRL+V+ EDCY
Sbjct: 410 AVGKLDKGLRDAGVSYHNLSGRHKSLYSIHSKMLKKNLTMEEIHDIHGLRLVVDTVEDCY 469
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 301
+AL VVH+LW V G+ KDYI+RPK NGY+SLHTVV EG+ P EVQIRTKEMHLQAE+G
Sbjct: 470 EALCVVHKLWPRVTGRFKDYISRPKLNGYRSLHTVVMSEGVHPFEVQIRTKEMHLQAEYG 529
Query: 302 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSC-VGNGDSIKPPCTFPSHA 360
FAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAM+K+R+ +GN D+++PPC FP H+
Sbjct: 530 FAAHWRYKEGTCRH-SFVLQMVEWARWVLTWQCEAMNKERTASLGNDDTVRPPCPFPLHS 588
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
++CP+SY QC+HDGP+FVI++E+DKMSVQEFP +STVMDL++R G SSRWSPY P+K
Sbjct: 589 EECPYSYTRQCNHDGPLFVILLEHDKMSVQEFPANSTVMDLMDRVGANSSRWSPYSIPVK 648
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYER-GLAVSNTG 477
E+LRPR+NH+ + DP KL MGDVVELTPA+P KSL+ YREEIQRMY+R G A+S G
Sbjct: 649 EDLRPRVNHEPICDPNRKLSMGDVVELTPALPRKSLSGYREEIQRMYDRGGFALSTRG 706
>gi|115479395|ref|NP_001063291.1| Os09g0442600 [Oryza sativa Japonica Group]
gi|113631524|dbj|BAF25205.1| Os09g0442600, partial [Oryza sativa Japonica Group]
Length = 491
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/477 (72%), Positives = 412/477 (86%), Gaps = 3/477 (0%)
Query: 3 ASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 62
ASGDPYL HCVETA+LLA IGANSTVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVEG
Sbjct: 11 ASGDPYLQHCVETAVLLANIGANSTVVSAGLLHDTIDDSFIDYDHIFHMFGAGVADLVEG 70
Query: 63 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCK 122
VSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL K
Sbjct: 71 VSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADARAVLIKLADRVHNMKTLEALPLGK 130
Query: 123 RQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSA 182
+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H +LSSKL + FDE ++TSA
Sbjct: 131 QQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKDLSSKLTKSFDEVLITSA 190
Query: 183 IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQ 242
++KL++ L+D +S+ L GRHKSLYSIH KMLKK LTMDEIHDI+GLRL+ E EEDCY+
Sbjct: 191 VDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKNLTMDEIHDIHGLRLVFEKEEDCYR 250
Query: 243 ALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGF 302
AL VVH+LW +VPG+ KDYI+RPK NGY+SLHTVV E + P EVQIRTKEMHLQAE+GF
Sbjct: 251 ALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVMSENVHPFEVQIRTKEMHLQAEYGF 310
Query: 303 AAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSHAD 361
AAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAM+K+R + +G+ D+I+PPC FP H++
Sbjct: 311 AAHWRYKEGTCRH-SFVLQMVEWARWVLTWQCEAMNKERPASLGDSDAIRPPCPFPMHSE 369
Query: 362 DCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKE 421
DCP+SY QC HDGP+FVI++E+DKMSVQEF +STVM+L++R G + RWSPY P+KE
Sbjct: 370 DCPYSYTRQCDHDGPIFVILLEHDKMSVQEFQANSTVMNLMDRVGTNTPRWSPYRIPMKE 429
Query: 422 ELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYER-GLAVSNTG 477
+LRP++NH+ + D KL MGDVVELTPA+P +SL YREEIQRMY+R G A++ G
Sbjct: 430 DLRPKVNHEPISDLNRKLSMGDVVELTPALPHESLPNYREEIQRMYDRGGFALATRG 486
>gi|51535999|dbj|BAD38079.1| putative plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
Length = 708
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/478 (72%), Positives = 413/478 (86%), Gaps = 3/478 (0%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDPYL HCVETA+LLA IGANSTVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVE
Sbjct: 227 RASGDPYLQHCVETAVLLANIGANSTVVSAGLLHDTIDDSFIDYDHIFHMFGAGVADLVE 286
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL
Sbjct: 287 GVSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADARAVLIKLADRVHNMKTLEALPLG 346
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H +LSSKL + FDE ++TS
Sbjct: 347 KQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKDLSSKLTKSFDEVLITS 406
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
A++KL++ L+D +S+ L GRHKSLYSIH KMLKK LTMDEIHDI+GLRL+ E EEDCY
Sbjct: 407 AVDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKNLTMDEIHDIHGLRLVFEKEEDCY 466
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 301
+AL VVH+LW +VPG+ KDYI+RPK NGY+SLHTVV E + P EVQIRTKEMHLQAE+G
Sbjct: 467 RALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVMSENVHPFEVQIRTKEMHLQAEYG 526
Query: 302 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSHA 360
FAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAM+K+R + +G+ D+I+PPC FP H+
Sbjct: 527 FAAHWRYKEGTCRH-SFVLQMVEWARWVLTWQCEAMNKERPASLGDSDAIRPPCPFPMHS 585
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCP+SY QC HDGP+FVI++E+DKMSVQEF +STVM+L++R G + RWSPY P+K
Sbjct: 586 EDCPYSYTRQCDHDGPIFVILLEHDKMSVQEFQANSTVMNLMDRVGTNTPRWSPYRIPMK 645
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYER-GLAVSNTG 477
E+LRP++NH+ + D KL MGDVVELTPA+P +SL YREEIQRMY+R G A++ G
Sbjct: 646 EDLRPKVNHEPISDLNRKLSMGDVVELTPALPHESLPNYREEIQRMYDRGGFALATRG 703
>gi|414870236|tpg|DAA48793.1| TPA: hypothetical protein ZEAMMB73_708443 [Zea mays]
Length = 713
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/478 (72%), Positives = 410/478 (85%), Gaps = 2/478 (0%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDPYL HCVETA+ LA IGAN+TVV+AGLLHDT+DD+F+ YD+IFR FGAGVADLVE
Sbjct: 235 RASGDPYLQHCVETAVHLANIGANATVVSAGLLHDTIDDSFMDYDHIFRMFGAGVADLVE 294
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+TVEADRLHTMFLAMADARAVLIKLADRLHNM T++ALPL
Sbjct: 295 GVSKLSHLSKLARDNNTASRTVEADRLHTMFLAMADARAVLIKLADRLHNMNTIEALPLV 354
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET+EIFVPLANRLGI++WK LEN+CFKHLNP++H ELSSKL+ FDEA++TS
Sbjct: 355 KQQRFAKETMEIFVPLANRLGIASWKDHLENICFKHLNPEEHKELSSKLLMSFDEALLTS 414
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
+ L+++L+D+ IS+ L GRHKSLYSI+ KM+KK LTMD++HDI+GLRL+VE EEDCY
Sbjct: 415 TLHNLDKSLRDEGISYHSLSGRHKSLYSIYSKMIKKNLTMDDVHDIHGLRLVVETEEDCY 474
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 301
+AL +VH+LW V G+ KDYI PK NGY+SLHTV+ EG+ P E+QIRTKEMHLQAE+G
Sbjct: 475 RALDIVHKLWPRVTGRFKDYICHPKLNGYRSLHTVIMCEGVHPFEIQIRTKEMHLQAEYG 534
Query: 302 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSHA 360
FAAHWRYKEG C+H SFVLQMVEWARWVLTWQCE +SK+R S + + I+PPC FP H+
Sbjct: 535 FAAHWRYKEGGCRH-SFVLQMVEWARWVLTWQCETLSKERPSSLSSSVGIRPPCPFPLHS 593
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DC +SY QC+++GP+FVIM+E+DKMSVQE P +STV+DL+ER G S RWSP FPLK
Sbjct: 594 EDCSYSYSRQCNYEGPIFVIMLEHDKMSVQELPANSTVVDLMERVGANSPRWSPCSFPLK 653
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGP 478
EELRPR+NHK + DP KL MGDVVELTPA+PDKSL+EYREEIQRMYERG T P
Sbjct: 654 EELRPRVNHKPISDPNRKLSMGDVVELTPALPDKSLSEYREEIQRMYERGGFALATTP 711
>gi|33354143|dbj|BAC81141.1| plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
Length = 728
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/498 (69%), Positives = 413/498 (82%), Gaps = 23/498 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTV--------------------VAAGLLHDTLDDA 41
RASGDPYL HCVETA+LLA IGANSTV V+AGLLHDT+DD+
Sbjct: 227 RASGDPYLQHCVETAVLLANIGANSTVLQHCVETAVLLANIGANSTVVSAGLLHDTIDDS 286
Query: 42 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAV 101
F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADARAV
Sbjct: 287 FIDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADARAV 346
Query: 102 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 161
LIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP+
Sbjct: 347 LIKLADRVHNMKTLEALPLGKQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPE 406
Query: 162 QHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 221
+H +LSSKL + FDE ++TSA++KL++ L+D +S+ L GRHKSLYSIH KMLKK LTM
Sbjct: 407 EHKDLSSKLTKSFDEVLITSAVDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKNLTM 466
Query: 222 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 281
DEIHDI+GLRL+ E EEDCY+AL VVH+LW +VPG+ KDYI+RPK NGY+SLHTVV E
Sbjct: 467 DEIHDIHGLRLVFEKEEDCYRALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVMSEN 526
Query: 282 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR 341
+ P EVQIRTKEMHLQAE+GFAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAM+K+R
Sbjct: 527 VHPFEVQIRTKEMHLQAEYGFAAHWRYKEGTCRH-SFVLQMVEWARWVLTWQCEAMNKER 585
Query: 342 -SCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD 400
+ +G+ D+I+PPC FP H++DCP+SY QC HDGP+FVI++E+DKMSVQEF +STVM+
Sbjct: 586 PASLGDSDAIRPPCPFPMHSEDCPYSYTRQCDHDGPIFVILLEHDKMSVQEFQANSTVMN 645
Query: 401 LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYR 460
L++R G + RWSPY P+KE+LRP++NH+ + D KL MGDVVELTPA+P +SL YR
Sbjct: 646 LMDRVGTNTPRWSPYRIPMKEDLRPKVNHEPISDLNRKLSMGDVVELTPALPHESLPNYR 705
Query: 461 EEIQRMYER-GLAVSNTG 477
EEIQRMY+R G A++ G
Sbjct: 706 EEIQRMYDRGGFALATRG 723
>gi|326505464|dbj|BAJ95403.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/470 (71%), Positives = 403/470 (85%), Gaps = 2/470 (0%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDP+L HCVETA+LLA IGA++TVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVE
Sbjct: 235 RASGDPFLQHCVETAVLLAKIGASATVVSAGLLHDTIDDSFVDYDHIFHMFGAGVADLVE 294
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+T EADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL
Sbjct: 295 GVSKLSHLSKLARDNNTASRTAEADRLHTMLLAMADARAVLIKLADRVHNMRTLEALPLV 354
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H ELSSK E FDEA++TS
Sbjct: 355 KQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKELSSKFAETFDEALITS 414
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
A++ L++ L++ IS+ L GR+K+LYS++ KM KK LTMDE+HDI+GLRL+V+ EEDCY
Sbjct: 415 AVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCY 474
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 301
+AL VVH+LW +V G+ KDYI+ PK NGY+SLHTVV +G EVQIRTKEMHLQAE+G
Sbjct: 475 RALDVVHKLWPQVDGRFKDYISLPKLNGYRSLHTVVMSDGDHTFEVQIRTKEMHLQAEYG 534
Query: 302 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVG-NGDSIKPPCTFPSHA 360
FAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEA++K+ S D+IKPPC FP H+
Sbjct: 535 FAAHWRYKEGSCRH-SFVLQMVEWARWVLTWQCEALNKEHSSSQVKSDAIKPPCPFPLHS 593
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
++CP+SY QC+H+GP+FVI++E+DKMSVQEFP STVMDL+ R G S RWSPY P+K
Sbjct: 594 EECPYSYTRQCNHEGPLFVILLEHDKMSVQEFPAGSTVMDLMHRVGANSPRWSPYSIPMK 653
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERG 470
E+LRP++NH+ + D L MGDVVELTPA+PDKSLTEYREEIQRMY+RG
Sbjct: 654 EDLRPKVNHEPISDTGRALNMGDVVELTPALPDKSLTEYREEIQRMYDRG 703
>gi|326503772|dbj|BAJ86392.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/470 (71%), Positives = 403/470 (85%), Gaps = 2/470 (0%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDP+L HCVETA+LLA IGA++TVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVE
Sbjct: 235 RASGDPFLQHCVETAVLLAKIGASATVVSAGLLHDTIDDSFVDYDHIFHMFGAGVADLVE 294
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+T EADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL
Sbjct: 295 GVSKLSHLSKLARDNNTASRTAEADRLHTMLLAMADARAVLIKLADRVHNMRTLEALPLV 354
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H ELSSK E FDEA++TS
Sbjct: 355 KQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKELSSKFAETFDEALITS 414
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
A++ L++ L++ IS+ L GR+K+LYS++ KM KK LTMDE+HDI+GLRL+V+ EEDCY
Sbjct: 415 AVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCY 474
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 301
+AL VVH+LW +V G+ KDYI+ PK NGY+SLHTVV +G EVQIRTKEMHLQAE+G
Sbjct: 475 RALDVVHKLWPQVDGRFKDYISLPKLNGYRSLHTVVMSDGDHTFEVQIRTKEMHLQAEYG 534
Query: 302 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVG-NGDSIKPPCTFPSHA 360
FAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEA++K+ S D+IKPPC FP H+
Sbjct: 535 FAAHWRYKEGSCRH-SFVLQMVEWARWVLTWQCEALNKEHSSSQVKSDAIKPPCPFPLHS 593
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
++CP+SY QC+H+GP+FVI++E+DKMSVQEFP STVMDL+ R G S RWSPY P+K
Sbjct: 594 EECPYSYTRQCNHEGPLFVILLEHDKMSVQEFPAGSTVMDLMHRVGANSPRWSPYSIPMK 653
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERG 470
E+LRP++NH+ + D L MGDVVELTPA+PDKSLTEYREEIQRMY+RG
Sbjct: 654 EDLRPKVNHEPISDTGRALNMGDVVELTPALPDKSLTEYREEIQRMYDRG 703
>gi|15822693|gb|AAL03950.1| relA/spoT-like protein RSH2 [Nicotiana tabacum]
Length = 643
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/393 (82%), Positives = 359/393 (91%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F++YDYIFRT GAGVADLV
Sbjct: 234 VRASGDPYLQHCVETAVLLAMIGANSTVVAAGLLHDTLDDTFMTYDYIFRTLGAGVADLV 293
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLAR+ NTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL
Sbjct: 294 EGVSKLSQLSKLARDFNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 353
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHLNPDQH ELSSKLV+ FDEAM+T
Sbjct: 354 AKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPDQHNELSSKLVKSFDEAMIT 413
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
S++ KLEQALKD ++S+ VL GRHKSLYSI+CKMLKKKL MDE+HDI+GLRLIVEN+EDC
Sbjct: 414 SSVGKLEQALKDDSVSYHVLSGRHKSLYSIYCKMLKKKLNMDEVHDIHGLRLIVENKEDC 473
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+ALRVVHQLW+EVPG+ KDYI PKFNGYQSLHTVV GEG+VPLEVQIRTKEMHLQAE+
Sbjct: 474 YKALRVVHQLWSEVPGRYKDYIANPKFNGYQSLHTVVLGEGMVPLEVQIRTKEMHLQAEY 533
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEG C+HSSFV QMVEWARWV+TWQCE M++D+S VG+ +SI+PPC FP+H+
Sbjct: 534 GFAAHWRYKEGACKHSSFVNQMVEWARWVVTWQCETMNRDQSSVGHTESIQPPCKFPAHS 593
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFP 393
+DCPFS KP C DGPVF+IMI+NDK+ P
Sbjct: 594 EDCPFSCKPNCGTDGPVFIIMIDNDKIVCARIP 626
>gi|357514023|ref|XP_003627300.1| GTP pyrophosphokinase [Medicago truncatula]
gi|355521322|gb|AET01776.1| GTP pyrophosphokinase [Medicago truncatula]
Length = 682
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/387 (82%), Positives = 355/387 (91%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDT+DDAFL+YDYI+ FGAGVADLV
Sbjct: 238 MRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTVDDAFLTYDYIYGMFGAGVADLV 297
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP+
Sbjct: 298 EGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPV 357
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHLNP QH ELSSKLVE +D+AM+
Sbjct: 358 AKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHLNPVQHKELSSKLVESYDDAMIA 417
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIE+LEQALKD+ IS+ V+ GRHKSLYS++CK+LKKKLT+D+IHDIYGLRLIV+ EEDC
Sbjct: 418 SAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKKLTIDDIHDIYGLRLIVDKEEDC 477
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL+VVH+LW+EV GK+KDYI PKFNGYQSLHTVV GEG VPLEVQ+RTK+MHLQAEF
Sbjct: 478 YKALKVVHRLWSEVHGKLKDYIRFPKFNGYQSLHTVVMGEGKVPLEVQVRTKDMHLQAEF 537
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKE CQ SS+VLQMVEWARWV+TWQCEAMSKD + VG DSIKPPC FPSHA
Sbjct: 538 GFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGYVDSIKPPCKFPSHA 597
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKM 387
D+CP+SYKP C+ DGPVFVIMIENDK+
Sbjct: 598 DNCPYSYKPDCAQDGPVFVIMIENDKV 624
>gi|414885657|tpg|DAA61671.1| TPA: hypothetical protein ZEAMMB73_267567 [Zea mays]
Length = 404
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 270/386 (69%), Positives = 328/386 (84%), Gaps = 7/386 (1%)
Query: 91 MFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQL 150
M LAMADARAVLIKLADRLHNM TL ALP K++RFAKET+EIFVPLANRLG+++WK QL
Sbjct: 1 MLLAMADARAVLIKLADRLHNMETLKALPCAKQERFAKETMEIFVPLANRLGVASWKDQL 60
Query: 151 ENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSI 210
ENLCFK+LNP++H ELSSKL E FDE ++TSA++KL++ L+D +S+ L GRHKSLYSI
Sbjct: 61 ENLCFKYLNPEEHEELSSKLRESFDEELITSAVDKLDKGLRDAGVSYHSLSGRHKSLYSI 120
Query: 211 HCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 270
HCKMLKK LTM+EIHDI+GLRL+VE+EEDCY+AL VVH+LW V G+ KDYI+RPK NGY
Sbjct: 121 HCKMLKKNLTMEEIHDIHGLRLLVESEEDCYEALCVVHRLWPRVTGRFKDYISRPKLNGY 180
Query: 271 QSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVL 330
+SLHTVV EG+ P EVQIRT+EMHLQAE+GFAAHWRYKEG C+H SFVL+MVEWARWVL
Sbjct: 181 RSLHTVVMSEGVHPFEVQIRTREMHLQAEYGFAAHWRYKEGTCRH-SFVLRMVEWARWVL 239
Query: 331 TWQCEAMSKDRSC-VGNGD---SIKPP--CTFPSHADDCPFSYKPQCSHDGPVFVIMIEN 384
TWQCEAM ++R+ +G+ D S++PP C FP HA+DCP+SY QC+HDGP+FVI++E+
Sbjct: 240 TWQCEAMDRERTASLGSDDGTVSVRPPPACPFPQHAEDCPYSYTRQCNHDGPLFVILLEH 299
Query: 385 DKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDV 444
KMSVQEFP + TVMDL++R G SSRWSPY P+KE+LRPR+N + + DP +L MGDV
Sbjct: 300 GKMSVQEFPANLTVMDLMDRVGANSSRWSPYSIPMKEDLRPRVNGEPICDPDRRLNMGDV 359
Query: 445 VELTPAIPDKSLTEYREEIQRMYERG 470
VELTPA+P KSL+ YREEIQRMY+RG
Sbjct: 360 VELTPALPRKSLSGYREEIQRMYDRG 385
>gi|224111520|ref|XP_002332921.1| predicted protein [Populus trichocarpa]
gi|222872004|gb|EEF09135.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 264/321 (82%), Positives = 291/321 (90%), Gaps = 1/321 (0%)
Query: 67 SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRF 126
SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNM+TLDALPL K+QRF
Sbjct: 1 SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMITLDALPLVKQQRF 60
Query: 127 AKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKL 186
AKET++IF PLANRLGISTWK QLE LCFKHLNPDQH LS++LVE FDEAM+ SA EKL
Sbjct: 61 AKETMQIFAPLANRLGISTWKEQLETLCFKHLNPDQHRHLSARLVESFDEAMIASAKEKL 120
Query: 187 EQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRV 246
++AL D+ IS+ L GRHKSLYSIHCKM KKKL MD+IHDI+GLRLIVEN+EDCY+ALRV
Sbjct: 121 DKALTDEAISY-NLHGRHKSLYSIHCKMSKKKLNMDQIHDIHGLRLIVENKEDCYRALRV 179
Query: 247 VHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHW 306
VH LW+EVPG+ KDYIT PKFNGY+SLHTVV GEG VPLEVQIRTKEMHLQAEFGFAAHW
Sbjct: 180 VHCLWSEVPGQFKDYITNPKFNGYRSLHTVVMGEGTVPLEVQIRTKEMHLQAEFGFAAHW 239
Query: 307 RYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFS 366
RYKEGDC+HSSFVLQ+VEWARWV+TWQCE MSKDR +G DSIKPPCTFPSH+D CP+S
Sbjct: 240 RYKEGDCKHSSFVLQVVEWARWVITWQCETMSKDRPSIGCDDSIKPPCTFPSHSDGCPYS 299
Query: 367 YKPQCSHDGPVFVIMIENDKM 387
YKP C DGP+F+IMIENDK+
Sbjct: 300 YKPHCGQDGPIFIIMIENDKV 320
>gi|242050856|ref|XP_002463172.1| hypothetical protein SORBIDRAFT_02g039080 [Sorghum bicolor]
gi|241926549|gb|EER99693.1| hypothetical protein SORBIDRAFT_02g039080 [Sorghum bicolor]
Length = 583
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 282/478 (58%), Positives = 344/478 (71%), Gaps = 15/478 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASGDPYL HCVETA LLA IGA VVAAGLLHDT+DDA L Y +I FGAGVADLV
Sbjct: 119 VRASGDPYLQHCVETAALLAEIGAGPAVVAAGLLHDTVDDAGLGYGFISEHFGAGVADLV 178
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
+GVSKLS LSKLAR NNTAS+ EADRL +FLAM DARAVLIKLADRLHNM TLD+LP
Sbjct: 179 KGVSKLSHLSKLARRNNTASRIDEADRLRIVFLAMEDARAVLIKLADRLHNMRTLDSLPK 238
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+Q FAKETLEIF PLAN+LGI WK QLENLCFK+L PD+ ELS+ L E ++ M+
Sbjct: 239 NKQQSFAKETLEIFAPLANQLGILNWKEQLENLCFKYLCPDKFDELSTSLTEFYNRDMIA 298
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
+A +LEQAL+ + +S+ + GRHKSLYSI+ KM +KKL MDEI+DI+G+R+I+EN+ DC
Sbjct: 299 AATRRLEQALQVRGLSYYAIYGRHKSLYSIYSKMARKKLVMDEIYDIHGVRVILENKADC 358
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
+ AL ++H LW +PGK KDYI PK N YQSLHTVV E +PLE+QIRT++MHLQAEF
Sbjct: 359 FAALEIIHHLWPRIPGKFKDYINSPKPNRYQSLHTVVLTEETLPLEIQIRTRDMHLQAEF 418
Query: 301 GFAAHWRYKEGDCQH-SSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPS 358
G AAHWRYKE + + V +MVEW RWV+TW C+ ++ D S + S K T PS
Sbjct: 419 GIAAHWRYKEVAARSCCTSVSEMVEWVRWVITWHCQTLNTDHPSSLARDASSKETHTIPS 478
Query: 359 HADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFP 418
H+D C SY QC H GPV VI++EN+KMSVQE P T++DLL R S YG P
Sbjct: 479 HSDACLLSYSKQCDHKGPVLVILLENEKMSVQEIPQDWTILDLLNR--------SNYGMP 530
Query: 419 LKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNT 476
LR RLN V + +LKMGDV+EL P+ P KS Y E+ + ++ LA+S +
Sbjct: 531 ----LRLRLNCHVVHNWNQELKMGDVLELIPSTPCKS-RGYTRELHQKFDHRLAISQS 583
>gi|222637445|gb|EEE67577.1| hypothetical protein OsJ_25106 [Oryza sativa Japonica Group]
Length = 467
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/478 (58%), Positives = 347/478 (72%), Gaps = 13/478 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETA LLA +GA VVAAGLLHDT+DDA L Y + FGAGVADLV
Sbjct: 1 MRASGDPYLQHCVETAALLAELGAGPAVVAAGLLHDTVDDAGLGYGSLSVQFGAGVADLV 60
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
+GVS LS LSKLAR N+TAS+ EAD+L T+FLAM DARAVLIKLADRLHNM TLD+LP
Sbjct: 61 KGVSNLSHLSKLARRNDTASRVDEADKLRTVFLAMEDARAVLIKLADRLHNMRTLDSLPK 120
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+Q FAKETLEIF PLAN+LGI WK QLENLCFK+L P+ + ELSS L+E +++ M+
Sbjct: 121 VKQQCFAKETLEIFAPLANQLGILNWKEQLENLCFKYLYPELYEELSSNLLEFYNQDMIA 180
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
+AI +LEQAL+ + + + + GR+KS+YSI+ KM +KKL MDEI+DI+G+R+I++N+ DC
Sbjct: 181 AAIRRLEQALQVRGLCYHTISGRNKSMYSIYSKMARKKLDMDEIYDIHGVRVILDNKADC 240
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
+ L +VH LW +PGK KDYI PK NGYQSLHTVV E +PLE+QIRT++MHLQAEF
Sbjct: 241 FTTLEIVHHLWPRIPGKFKDYINSPKPNGYQSLHTVVLSEETLPLEIQIRTRDMHLQAEF 300
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSH 359
G AAHWRYKE S V +MVEW RWV+TWQCE + D S + +G + C+ S
Sbjct: 301 GIAAHWRYKEAVRNCCSSVPEMVEWVRWVVTWQCETLHIDHPSSLTHGAPPRAICSCSSQ 360
Query: 360 ADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPL 419
+DDCPFSY +C H GP+ VI++EN+KMSVQEFP +STV+DLL+R S Y
Sbjct: 361 SDDCPFSYSKRCDHSGPILVILLENEKMSVQEFPQNSTVLDLLKRT-------SSYDM-- 411
Query: 420 KEELRPRLNHKAVGDPRCKLKMGDVVELTP-AIPDKSLTEYREEIQRMYERGLAVSNT 476
+LR RLN V + +LKMGDVVEL P A + Y E +MY+ L VS +
Sbjct: 412 --QLRLRLNCHVVHNLNQELKMGDVVELIPLAQCNPGAGGYAREFHQMYDHRLTVSQS 467
>gi|24059853|dbj|BAC21321.1| putative RSH, disease resistance-related protein [Oryza sativa
Japonica Group]
Length = 589
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/478 (58%), Positives = 345/478 (72%), Gaps = 15/478 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HCVETA LLA +GA VVAAGLLHDT+DDA L Y + FGAGVADLV
Sbjct: 125 MRASGDPYLQHCVETAALLAELGAGPAVVAAGLLHDTVDDAGLGYGSLSVQFGAGVADLV 184
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
+GVS LS LSKLAR N+TAS+ EAD+L T+FLAM DARAVLIKLADRLHNM TLD+LP
Sbjct: 185 KGVSNLSHLSKLARRNDTASRVDEADKLRTVFLAMEDARAVLIKLADRLHNMRTLDSLPK 244
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+Q FAKETLEIF PLAN+LGI WK QLENLCFK+L P+ + ELSS L+E +++ M+
Sbjct: 245 VKQQCFAKETLEIFAPLANQLGILNWKEQLENLCFKYLYPELYEELSSNLLEFYNQDMIA 304
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
+AI +LEQAL+ + + + + GR+KS+YSI+ KM KKL MDEI+DI+G+R+I++N+ DC
Sbjct: 305 AAIRRLEQALQVRGLCYHTISGRNKSMYSIYSKM-AKKLDMDEIYDIHGVRVILDNKADC 363
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
+ L +VH LW +PGK KDYI PK N YQSLHTVV E +PLE+QIRT++MHLQAEF
Sbjct: 364 FTTLEIVHHLWPRIPGKFKDYINSPKPN-YQSLHTVVLSEETLPLEIQIRTRDMHLQAEF 422
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSH 359
G AAHWRYKE S V +MVEW RWV+TWQCE + D S + +G + C+ S
Sbjct: 423 GIAAHWRYKEAVRNCCSSVPEMVEWVRWVVTWQCETLHIDHPSSLTHGAPPRAICSCSSQ 482
Query: 360 ADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPL 419
+DDCPFSY +C H GP+ VI++EN+KMSVQEFP +STV+DLL+R S Y
Sbjct: 483 SDDCPFSYSKRCDHSGPILVILLENEKMSVQEFPQNSTVLDLLKRT-------SSYDM-- 533
Query: 420 KEELRPRLNHKAVGDPRCKLKMGDVVELTP-AIPDKSLTEYREEIQRMYERGLAVSNT 476
+LR RLN V + +LKMGDVVEL P A + Y E +MY+ L VS +
Sbjct: 534 --QLRLRLNCHVVHNLNQELKMGDVVELIPLAQCNPGAGGYAREFHQMYDHRLTVSQS 589
>gi|414887563|tpg|DAA63577.1| TPA: hypothetical protein ZEAMMB73_929416 [Zea mays]
Length = 614
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 275/477 (57%), Positives = 344/477 (72%), Gaps = 14/477 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASGDPYL HCVETA LLA +GA VVAAGLLHDT+DDA L Y +I FGAGVADLV
Sbjct: 151 VRASGDPYLQHCVETAALLAELGAGPAVVAAGLLHDTVDDAGLGYGFISEHFGAGVADLV 210
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
+GVS LS LSKLAR N+TAS+ EADRL +FLAM DARAVLIKLADRLHNM TLD+L
Sbjct: 211 KGVSNLSHLSKLARRNDTASRIDEADRLRIVFLAMEDARAVLIKLADRLHNMRTLDSLSK 270
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+Q AKETLEIF PLAN+LGI WK QLENLCFK+L P+ ELS+KL+E ++ M+
Sbjct: 271 TKQQSVAKETLEIFAPLANQLGILNWKEQLENLCFKYLYPENFDELSTKLIEIYNIDMIA 330
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
+A +LEQAL+ + +S+ + GRHKS+YSI+ KM +KKL MD+I+DI+G+R+I+EN+ DC
Sbjct: 331 AATRRLEQALQVRGLSYYAIYGRHKSMYSIYRKMARKKLVMDKIYDIHGVRVILENKADC 390
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
+ L ++H LW +PGK KDYI PK N YQSLHTVV E +PLE+QIRT++MHLQAEF
Sbjct: 391 FATLEIIHHLWPRIPGKFKDYINSPKPNRYQSLHTVVLTEQTLPLEIQIRTRDMHLQAEF 450
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSH 359
G AAHWRYKEG+ + V ++VEW RWV TW C+ ++ S + S K T PSH
Sbjct: 451 GIAAHWRYKEGERSCCTSVSEIVEWVRWV-TWHCQTLNTGYPSSLACDASSKETHTIPSH 509
Query: 360 ADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPL 419
+D C SY QC H GPV VI++EN+KMSVQE P + T++DLL+R+ S YG P
Sbjct: 510 SDACLLSYSKQCDHKGPVLVILLENEKMSVQEIPQNWTILDLLKRS-------SNYGMP- 561
Query: 420 KEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNT 476
LR RLN AV + +LKMGDV+EL P+ P KS R E+ + ++ LAVS +
Sbjct: 562 ---LRLRLNCHAVHNWNQELKMGDVLELIPSTPCKSRGHTR-ELHQKFDHRLAVSQS 614
>gi|302784096|ref|XP_002973820.1| hypothetical protein SELMODRAFT_100367 [Selaginella moellendorffii]
gi|300158152|gb|EFJ24775.1| hypothetical protein SELMODRAFT_100367 [Selaginella moellendorffii]
Length = 542
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 271/487 (55%), Positives = 340/487 (69%), Gaps = 24/487 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+ YL HCVETA+LLA+ GA +TVVAAGLLHDTLDD+ + I FG VADLV
Sbjct: 33 FRRSGELYLTHCVETAILLASAGAEATVVAAGLLHDTLDDSSIDEAQIRAIFGDDVADLV 92
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
GVSK+SQLS+LAR+NN ASKT+EADRL TMFLAM D R VLIKLADRLHNM TL+AL
Sbjct: 93 VGVSKISQLSQLARDNNIASKTLEADRLRTMFLAMVDVRVVLIKLADRLHNMRTLEALAA 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ R A ETLEI VP+ANRLGI +WK ++E+LCFK+LNP ++ EL++KL+EC +V
Sbjct: 153 EKQNRIASETLEILVPIANRLGIWSWKAEMEDLCFKYLNPTEYQELAAKLIECCRGGVVL 212
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIE+L++AL+ I LCGR K+L+SI+ KM KK ++DEI+D+ GLRLIV++E DC
Sbjct: 213 SAIEQLDKALRKSKIKIEDLCGRSKTLFSIYTKMKKKGRSIDEIYDVRGLRLIVKDEADC 272
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VH+LW +PGK+KDYI +PK NGYQSLHTVV+G+ +PLEVQIRTKEMH AEF
Sbjct: 273 YKALEFVHKLWDHIPGKLKDYIKQPKANGYQSLHTVVSGKDGLPLEVQIRTKEMHSHAEF 332
Query: 301 GFAAHWRYKEG-DCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSH 359
G AAHWRYKEG D +HS+F+LQ VEWARW+LTW E M + +K C FP H
Sbjct: 333 GMAAHWRYKEGNDTKHSAFLLQRVEWARWILTWHSEIMDNKLRVSPSHMDLKSSCPFPFH 392
Query: 360 ADDC----PFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPY 415
DDC PFS P+ S D P+FVIM++++ M VQE P T DL+ G P
Sbjct: 393 KDDCRHAHPFSGPPE-SEDDPLFVIMLKDETMIVQELPPGCTAADLVTERGADHFLLDP- 450
Query: 416 GFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL---------------TPAIPDKSLTEYR 460
+ E+ PR+NH+ V + KL+MGDVVE+ PA ++ YR
Sbjct: 451 --GVLSEMTPRVNHQEVENFHQKLRMGDVVEIVDKEERSKVLVTMARVPAKASNEISVYR 508
Query: 461 EEIQRMY 467
E+I+RMY
Sbjct: 509 EQIRRMY 515
>gi|302803634|ref|XP_002983570.1| hypothetical protein SELMODRAFT_118606 [Selaginella moellendorffii]
gi|300148813|gb|EFJ15471.1| hypothetical protein SELMODRAFT_118606 [Selaginella moellendorffii]
Length = 540
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/484 (55%), Positives = 338/484 (69%), Gaps = 20/484 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+ YL HCVETA+LLA+ GA +TVVAAGLLHDTLDD+ + I FG VADLV
Sbjct: 33 FRRSGELYLTHCVETAILLASAGAEATVVAAGLLHDTLDDSSIDEAQIRAIFGDDVADLV 92
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
GVSK+SQLS+LAR+NN ASKT+EA RL TMFLAM D R VLIKLADRLHNM TL+AL
Sbjct: 93 VGVSKISQLSQLARDNNIASKTLEAGRLRTMFLAMVDVRVVLIKLADRLHNMRTLEALAT 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ R A ETLEI VP+ANRLGI +WK ++E+LCFK+LNP ++ EL++KL+EC +V
Sbjct: 153 EKQNRIASETLEILVPIANRLGIWSWKAEMEDLCFKYLNPTEYQELAAKLIECCRGGVVL 212
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIE+L++AL+ I LCGR K+L+SI+ KM KK ++DEI+D+ GLRLIV++E DC
Sbjct: 213 SAIEQLDKALRKSKIKIEDLCGRSKTLFSIYTKMKKKGRSIDEIYDVRGLRLIVKDEADC 272
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VH+LW +PGK+KDYI +PK NGYQSLHTVV+G+ +PLEVQIRTKEMH AEF
Sbjct: 273 YKALEFVHKLWDHIPGKLKDYIKQPKANGYQSLHTVVSGKDGLPLEVQIRTKEMHSHAEF 332
Query: 301 GFAAHWRYKEG-DCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSH 359
G AAHWRYKEG D +HS+F+LQ VEWARW+LTW E M + +K C FP H
Sbjct: 333 GMAAHWRYKEGNDTKHSAFLLQRVEWARWILTWHSEIMDNKLRVSPSHMDLKSSCPFPFH 392
Query: 360 ADDCPFSYK-PQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFP 418
DDC ++ P S D P+FVIM++++KM VQE P T DL+ G P
Sbjct: 393 KDDCRHAFSGPPESEDDPLFVIMLKDEKMIVQELPPGCTAADLVTERGEDHFLLDP---G 449
Query: 419 LKEELRPRLNHKAVGDPRCKLKMGDVVEL---------------TPAIPDKSLTEYREEI 463
+ E+ PR+NH+ V + KL+MGDVVE+ PA ++ YRE+I
Sbjct: 450 VLSEMTPRVNHQEVENFHQKLRMGDVVEIVEKEERSKVLVTMARVPAKASNEISVYREQI 509
Query: 464 QRMY 467
+RMY
Sbjct: 510 RRMY 513
>gi|62319609|dbj|BAD95087.1| RSH3 [Arabidopsis thaliana]
Length = 321
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/321 (75%), Positives = 275/321 (85%), Gaps = 4/321 (1%)
Query: 166 LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 225
+S L + FDEAM+TSAIEKLEQALK + IS+ V+ GRHKSLYSI+CKMLKKKLTMDEIH
Sbjct: 1 MSDMLEDSFDEAMITSAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTMDEIH 60
Query: 226 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 285
DI+GLRLIV+NE+DCY+AL VVH+LW+EVPGK+KDYI+ PKFNGYQSLHTVV G+G +PL
Sbjct: 61 DIHGLRLIVDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPL 120
Query: 286 EVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVG 345
EVQIRTKEMHLQAEFGFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKD S +
Sbjct: 121 EVQIRTKEMHLQAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDGSSIC 180
Query: 346 NGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERA 405
+ + P C+FPSHA+DCPFSYKP + +GPV+VI+IEN+KM+VQEFP +STV DLL RA
Sbjct: 181 SSE---PLCSFPSHAEDCPFSYKPSGNQEGPVYVIVIENEKMTVQEFPENSTVSDLLRRA 237
Query: 406 GRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQR 465
G GSSRWS Y P KEELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQR
Sbjct: 238 GPGSSRWSMYSIPAKEELRPRLNQTPVSDLKCKLKMGDVVELTPAIPDKSLTEYREEIQR 297
Query: 466 MYERGLAVSNTGPAVT-SMVG 485
MY+RGLA S A T +MVG
Sbjct: 298 MYDRGLAFSRPHRAATGTMVG 318
>gi|125563887|gb|EAZ09267.1| hypothetical protein OsI_31540 [Oryza sativa Indica Group]
Length = 533
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/305 (77%), Positives = 271/305 (88%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDPYL HCVETA+LLA IGANSTVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVE
Sbjct: 227 RASGDPYLQHCVETAVLLANIGANSTVVSAGLLHDTIDDSFIDYDHIFHMFGAGVADLVE 286
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL
Sbjct: 287 GVSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADARAVLIKLADRVHNMKTLEALPLG 346
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET+EIFVPLANRLGIS+WK QLENLCFKHLNP++H +LSSKL + FDE ++TS
Sbjct: 347 KQQRFAKETMEIFVPLANRLGISSWKDQLENLCFKHLNPEEHKDLSSKLTKSFDEVLITS 406
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
A++KL++ L+D +S+ L GRHKSLYSIH KMLKK LTMDEIHDI+GLRL+ E EEDCY
Sbjct: 407 AVDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKNLTMDEIHDIHGLRLVFEKEEDCY 466
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 301
+AL VVH+LW +VPG+ KDYI+RPK NGY+SLHTVV E + P EVQIRTKEMHLQAE+G
Sbjct: 467 RALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVMSENVHPFEVQIRTKEMHLQAEYG 526
Query: 302 FAAHW 306
FAAHW
Sbjct: 527 FAAHW 531
>gi|168004491|ref|XP_001754945.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694049|gb|EDQ80399.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 573
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/455 (53%), Positives = 309/455 (67%), Gaps = 4/455 (0%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R +GD +L HCVETA++LAA G +TVVAAGLLHD +DD+ LS + G VA LV
Sbjct: 63 FRRNGDTFLSHCVETALILAATGVGNTVVAAGLLHDAIDDSNLSLQLLRGALGEDVASLV 122
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
GVSKLS+ S+LAR++NT EAD L TM LAM D R VLIK+ADRLHN+ TL ALP
Sbjct: 123 SGVSKLSEFSQLARDSNTVRDPTEADSLRTMILAMVDVRVVLIKIADRLHNLRTLGALPY 182
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ A ETLEIF PLANRLGI +WK +LE+LCFK L P +H +LS++L E E +V
Sbjct: 183 LKQIGIANETLEIFAPLANRLGIWSWKAELEDLCFKCLKPVEHQDLSARLSERCREGLVM 242
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
S+I L+ AL+++ + F+ L GR K+LYSI+ KM+KKK T +EI D+ GLRLIV +E +C
Sbjct: 243 SSIRDLDDALRNEGVQFVDLSGRPKNLYSIYKKMMKKKRTPEEILDVRGLRLIVSDENNC 302
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL++VH+LW +VPGK KDYI K NGY+SLHTVV G PLEVQIRT +MH QAE+
Sbjct: 303 YEALQIVHKLWKQVPGKSKDYIAHSKPNGYKSLHTVVIGSDGYPLEVQIRTMKMHHQAEY 362
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
G AAHWRYKE + QHS+F + VEWARWVLTW E M G+ +KPPC FP H
Sbjct: 363 GLAAHWRYKEDNTQHSAFSSERVEWARWVLTWHSEIMDTKLRVSPLGEDLKPPCPFPVHN 422
Query: 361 DDCPFSYK---PQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLE-RAGRGSSRWSPYG 416
DCP++ P D PVFVI +EN+++ V E P STV DL+ R S
Sbjct: 423 KDCPYASTCCGPLFREDDPVFVIKMENERIVVLEMPPGSTVGDLVSMRKSDMDSFAVNSN 482
Query: 417 FPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAI 451
+ ++ELR ++NH+ V + KLKMGD VE+ +
Sbjct: 483 YGHQKELRVQVNHQFVENLEQKLKMGDFVEVLSTV 517
>gi|168052096|ref|XP_001778487.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670085|gb|EDQ56660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/478 (51%), Positives = 315/478 (65%), Gaps = 8/478 (1%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R +GD +L HCVETA++LAA G + VVAAGLLHD +DD+ LS + + + G VA LV
Sbjct: 48 FRRNGDMFLAHCVETALILAATGVGNIVVAAGLLHDAIDDSNLSLELLRCSLGENVASLV 107
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
GVSKLS+ S+LAR+ NT T+EADRL TM LAM D R VLIK+ADRLHN+ TL+ALP
Sbjct: 108 IGVSKLSEFSQLARDCNTVCDTLEADRLRTMILAMVDVRVVLIKIADRLHNLRTLEALPS 167
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ AKETLEIF PLANRLGI +WK ++E+LCFK L P H LS +L E E +V
Sbjct: 168 HKQIGIAKETLEIFAPLANRLGIWSWKAEMEDLCFKCLKPVDHENLSIRLSERCREGLVM 227
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
S+I L++AL+ + F+ LCGR K+LYS++ KM+KKK + DEI D+ GLRLIV +EE C
Sbjct: 228 SSIRDLDEALRVGGVQFIDLCGRPKNLYSVYKKMMKKKRSPDEILDVRGLRLIVTDEESC 287
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
YQAL VVHQLW +PGK KDYI K NGY+SLHTVV G PLEVQIRT +MH QAE+
Sbjct: 288 YQALEVVHQLWRCIPGKTKDYIVDSKPNGYKSLHTVVIGSDGYPLEVQIRTMKMHHQAEY 347
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
G AAHWRYKE + +HS+F + VEWARWVLTWQ E M +KPPC FP H
Sbjct: 348 GLAAHWRYKEDNSEHSAFSSERVEWARWVLTWQSEIMDTKLRVSPLAADLKPPCPFPVHI 407
Query: 361 DDCPFS---YKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGF 417
+CP++ +P + PV+VI +EN+ + V+E P STV DL+ +
Sbjct: 408 KECPYAGSCCEPVMRENDPVYVIKMENEHILVRELPPGSTVGDLVRSKHSDMNSLVVDSR 467
Query: 418 PLKEE-LRPRLNHKAVGDPRCKLKMGDVVELTPAIPDK----SLTEYREEIQRMYERG 470
+ LR ++NH+ V KLKMGD VE+ + +L RE+++R+Y G
Sbjct: 468 SANDNGLRVKVNHEFVDTMEQKLKMGDFVEVMSTVKKPCGKVALEFQREQLKRLYLDG 525
>gi|168066267|ref|XP_001785062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663355|gb|EDQ50123.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 627
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/478 (48%), Positives = 317/478 (66%), Gaps = 10/478 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R +GD +L HCVETA+ LAAIG ++TV+AAGLLHD +DD+ + T G VA+LV
Sbjct: 131 VRRNGDMFLSHCVETALTLAAIGVSNTVIAAGLLHDAIDDSNFCLKRLRDTLGEDVANLV 190
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
GVSKLS+ S+LAR++NT +EADRL TM LA+ D R VL+K+ADRLHN+ TL+ALP
Sbjct: 191 IGVSKLSEFSQLARDSNTVGNPMEADRLRTMILALVDVRVVLVKIADRLHNLRTLEALPS 250
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ A ETL IF PLANRLGI WK +LE+LCFK+L P+ H +LS +L E E +V
Sbjct: 251 HKQIGIATETLGIFAPLANRLGIWRWKAELEDLCFKYLKPEDHQDLSMRLSERCREGLVM 310
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
S+I+ L++AL+ + + F+ LCGR K+LYS++ KM+KKK +++EI D+ GLRLIV +E C
Sbjct: 311 SSIKNLDEALRIRGVEFIDLCGRPKNLYSVYKKMMKKKRSLEEILDVIGLRLIVSDENSC 370
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL +VHQL +PGK KDYI K NGY+SLHTVV G PLEVQIRT +MH QAE+
Sbjct: 371 YEALEIVHQLC--MPGKSKDYIVDSKPNGYKSLHTVVIGSDGYPLEVQIRTMKMHHQAEY 428
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
G AAHWRYKE + +HS+F + +EWARWVLTW E M G +KPPC FP H
Sbjct: 429 GLAAHWRYKEDNSEHSAFSFERIEWARWVLTWHSEIMDTKLRVSPLGADLKPPCPFPVHN 488
Query: 361 DDCPFSY---KPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLL-ERAGRGSSRWSPYG 416
CP+ +P + PVFV+ +E++ + V+E P ST+ DL+ A +
Sbjct: 489 KGCPYEAHCCEPTVKENDPVFVVKMEDEHIFVREMPPGSTIGDLVCATASHVDFLAADST 548
Query: 417 FPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDK----SLTEYREEIQRMYERG 470
+ LR ++NH+ V + KL+MGD VE+ + +L RE+++R+Y G
Sbjct: 549 SANQNGLRVKVNHEFVNNLEQKLRMGDFVEVVTTVEKPCGKIALEFQREQLKRLYLDG 606
>gi|154269268|gb|ABS72194.1| RSH2, partial [Corchorus olitorius]
Length = 239
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/239 (82%), Positives = 218/239 (91%)
Query: 123 RQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSA 182
+QRFAKETLEIF PLANRLGIS+WK QLENLCFKHLNPDQH ELSS+LV FDEAM+TSA
Sbjct: 1 QQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPDQHKELSSRLVNSFDEAMITSA 60
Query: 183 IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQ 242
IEKLE+ALKDK I + VL GRHKSLY I+ KMLKKKL MDEIHDI+GLR+IVENEEDCY+
Sbjct: 61 IEKLERALKDKEIPYHVLSGRHKSLYGIYSKMLKKKLAMDEIHDIHGLRIIVENEEDCYE 120
Query: 243 ALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGF 302
ALRVVHQLW+EVPGK+KDYI+ PKFNGYQSLHTVV GEG VPLEVQIRTKEMHLQAEFGF
Sbjct: 121 ALRVVHQLWSEVPGKLKDYISHPKFNGYQSLHTVVKGEGTVPLEVQIRTKEMHLQAEFGF 180
Query: 303 AAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHAD 361
AAHWRYKEGDC+HSSF+LQMVEWARWV+TW CE MSKDRS +G DS+KPPC FP+H++
Sbjct: 181 AAHWRYKEGDCKHSSFILQMVEWARWVVTWHCETMSKDRSSIGYNDSVKPPCAFPTHSE 239
>gi|326506174|dbj|BAJ86405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/271 (72%), Positives = 238/271 (87%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDP+L HCVETA+LLA IGA++TVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVE
Sbjct: 235 RASGDPFLQHCVETAVLLAKIGASATVVSAGLLHDTIDDSFVDYDHIFHMFGAGVADLVE 294
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLC 121
GVSKLS LSKLAR+NNTAS+T EADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL
Sbjct: 295 GVSKLSHLSKLARDNNTASRTAEADRLHTMLLAMADARAVLIKLADRVHNMRTLEALPLV 354
Query: 122 KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTS 181
K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H ELSSK E FDEA++TS
Sbjct: 355 KQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKELSSKFAETFDEALITS 414
Query: 182 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 241
A++ L++ L++ IS+ L GR+K+LYS++ KM KK LTMDE+HDI+GLRL+V+ EEDCY
Sbjct: 415 AVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCY 474
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQS 272
+AL VVH+LW +V G+ KDYI+ PK NGY +
Sbjct: 475 RALDVVHKLWPQVDGRFKDYISLPKLNGYAA 505
>gi|168052100|ref|XP_001778489.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670087|gb|EDQ56662.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 389
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/378 (51%), Positives = 246/378 (65%), Gaps = 4/378 (1%)
Query: 78 TASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPL 137
T T EADRL TM LAM D R VLIK+ADRLHN+ TL+ALP K+ AKETLEIF PL
Sbjct: 1 TVCDTTEADRLRTMILAMVDVRVVLIKIADRLHNLRTLEALPSHKQIGIAKETLEIFAPL 60
Query: 138 ANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISF 197
ANRLGI +WK ++E+LCFK L P H LS +L E E +V S+I L++AL+ + F
Sbjct: 61 ANRLGIWSWKAEMEDLCFKCLKPVDHENLSIRLSERCREGLVMSSIRYLDEALRVGGVQF 120
Query: 198 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 257
+ LCGR K+LYS++ KM+KKK + DEI D+ GLRLIV +EE CYQAL VVHQLW +PGK
Sbjct: 121 IDLCGRPKNLYSVYKKMMKKKRSPDEILDVRGLRLIVTDEESCYQALEVVHQLWRCIPGK 180
Query: 258 MKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS 317
KDYI K NG +SLHTVV G PLEVQIRT +MH QAE+G AAHWRYKE + +HS+
Sbjct: 181 TKDYIVDSKPNGCKSLHTVVIGSDGYPLEVQIRTMKMHHQAEYGLAAHWRYKEDNSEHSA 240
Query: 318 FVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFS---YKPQCSHD 374
F + VEWARWVLTWQ E M +KPPC FP H +CP++ +P +
Sbjct: 241 FSSERVEWARWVLTWQSEIMDTKLRVSPLAADLKPPCPFPVHNKECPYAGSCCEPVMREN 300
Query: 375 GPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEE-LRPRLNHKAVG 433
PV+VI +EN+ + V+E P STV DL+ + + LR ++NH+ V
Sbjct: 301 DPVYVIKMENEHILVRELPPGSTVGDLVRSKHSDMNSLVVDSRSANDNGLRVKVNHEFVD 360
Query: 434 DPRCKLKMGDVVELTPAI 451
KLKMGD VE+ +
Sbjct: 361 TMEPKLKMGDFVEVMSTV 378
>gi|357514021|ref|XP_003627299.1| GTP pyrophosphokinase [Medicago truncatula]
gi|355521321|gb|AET01775.1| GTP pyrophosphokinase [Medicago truncatula]
Length = 467
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/219 (82%), Positives = 201/219 (91%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDT+DDAFL+YDYI+ FGAGVADLV
Sbjct: 238 MRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTVDDAFLTYDYIYGMFGAGVADLV 297
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP+
Sbjct: 298 EGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPV 357
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHLNP QH ELSSKLVE +D+AM+
Sbjct: 358 AKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHLNPVQHKELSSKLVESYDDAMIA 417
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 219
SAIE+LEQALKD+ IS+ V+ GRHKSLYS++CK+LK L
Sbjct: 418 SAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKYVL 456
>gi|110737342|dbj|BAF00616.1| putative GTP pyrophosphokinase [Arabidopsis thaliana]
Length = 216
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 193/216 (89%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD+F+SYDYI R FGAGVADLV
Sbjct: 1 MRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTIDDSFMSYDYILRNFGAGVADLV 60
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM TL AL
Sbjct: 61 EGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMKTLYALSP 120
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P+QH E+S+ L + FDEAM+T
Sbjct: 121 VKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDSFDEAMIT 180
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 216
SAIEKLEQALK IS+ VLCGRHKSLYSI+ KMLK
Sbjct: 181 SAIEKLEQALKKAGISYHVLCGRHKSLYSIYSKMLK 216
>gi|255085290|ref|XP_002505076.1| predicted protein [Micromonas sp. RCC299]
gi|226520345|gb|ACO66334.1| predicted protein [Micromonas sp. RCC299]
Length = 736
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 187/508 (36%), Positives = 272/508 (53%), Gaps = 64/508 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGD L V TA+++A +G +S VVA LLHD LDD ++ + T + +V
Sbjct: 166 LRKSGDSVLSAQVGTALIVAELGMDSKVVATALLHDVLDDTPVTERELRNTTPDSIVTMV 225
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
GVSKLS +S+L R + + E +L + +AM D R V++KLADRL + T+ AL
Sbjct: 226 TGVSKLSLVSQLQRSSGRSLAREERLKLRALLVAMTDVRVVIVKLADRLQCLETIHALGE 285
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
R A+ETL I+VPLA+RLGI + K +LE+ CF +L+P+ H LS++L +A V
Sbjct: 286 DTATRIAQETLSIYVPLASRLGIWSLKTRLEDACFAYLHPEAHASLSAELARDEQKAAVQ 345
Query: 181 SAIEKLEQAL-KDKNISFL-VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
A+E + L D IS + + GR KSL+S+H KML+K + + ++HD+ +R+IV++E+
Sbjct: 346 RAVEDITSTLVADAGISDVHDIYGRAKSLFSVHRKMLRKGIALGDVHDLRAVRVIVDSED 405
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL +H +A VPGK KDY+ K NGYQSLHTVV P+EVQIRT EMH A
Sbjct: 406 DCYAALEAIHGKFAPVPGKTKDYVRNAKVNGYQSLHTVVVAADGAPVEVQIRTAEMHRAA 465
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ-------CEAMS-KDRSCVGNG--- 347
E G AAHWRYKE H + +Q V WAR++L+WQ C A + + +G G
Sbjct: 466 ESGMAAHWRYKESVVNHRAIDVQ-VAWARFMLSWQGQLVDDKCRAAGVRIATAMGAGGGS 524
Query: 348 ---DSIKP----PCTFPSHADDCP-------FSYKPQCSH-------------------- 373
++++P C FP+H DDCP F C
Sbjct: 525 VELEALQPCVPCECPFPAHCDDCPNHEDAILFGACGACGGAESSVSSLVSADSASMSKQR 584
Query: 374 ---------DGPVFVIMIENDKMSVQEFPTSSTV--MDLLERAGRGSSRWSPYGFPLKEE 422
P+FV+++ + M+V E + + +D G F E
Sbjct: 585 RPASSPLEVSAPIFVVVVVDGDMAVVELAKGARLSDVDFASVCGDEPGAVRTAEFTAVES 644
Query: 423 LRPRLNHKAV---GDPRCKLKMGDVVEL 447
+ +N ++V +P L+MGD+VE+
Sbjct: 645 I--AVNRESVPPGAEPAVTLRMGDLVEV 670
>gi|110739789|dbj|BAF01801.1| RSH3 [Arabidopsis thaliana]
Length = 197
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/197 (74%), Positives = 163/197 (82%), Gaps = 4/197 (2%)
Query: 290 RTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDS 349
RTKEMHLQAEFGFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKD S + S
Sbjct: 1 RTKEMHLQAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDGSSIC---S 57
Query: 350 IKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGS 409
+P C+FPSHA+DCPFSYKP + +GPV+VI+IEN+KM+VQEFP +STV DLL RAG GS
Sbjct: 58 SEPLCSFPSHAEDCPFSYKPSGNQEGPVYVIVIENEKMTVQEFPENSTVSDLLRRAGPGS 117
Query: 410 SRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYER 469
SRWS Y P KEELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQRMY+R
Sbjct: 118 SRWSMYSIPAKEELRPRLNQTPVSDLKCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDR 177
Query: 470 GLAVSNTGPAVT-SMVG 485
GLA S A T +MVG
Sbjct: 178 GLAFSRPHRAATGTMVG 194
>gi|145341928|ref|XP_001416051.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576275|gb|ABO94343.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 557
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 182/481 (37%), Positives = 270/481 (56%), Gaps = 37/481 (7%)
Query: 7 PYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKL 66
P+ CV+TA+ LA +G ++ VA GLLHDTLD + + + + F V LVE V+++
Sbjct: 54 PHFDRCVDTAITLAKLGMDAKTVAVGLLHDTLDVTSSTKEDLRKRFSDEVVALVEDVTRV 113
Query: 67 SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRF 126
++SKL R + E + M LAM DAR V++KLA RL M L + P ++Q F
Sbjct: 114 HRVSKLHRASGRVLDFNERAQFRAMLLAMTDARVVIVKLAARLIKMRNLASAPQSQQQAF 173
Query: 127 AKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKL 186
A ETL I+ PLA RLGI + K +LE+L FK +NP + ELS L + + +A+ KL
Sbjct: 174 ADETLTIYAPLAARLGIFSVKNELEDLTFKWMNPQAYAELSQTLDQ---RESIVAALNKL 230
Query: 187 EQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV-------ENEED 239
++ L + + LCGR KS+YS++ KML K +++I D+ +R+IV E+E+
Sbjct: 231 DEELSSRRAQVVDLCGRQKSVYSVYKKMLSKNQKLEDIMDLRAIRIIVADGDNDAESEQT 290
Query: 240 CYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAE 299
C + L + + V G+ KDYI PK NGYQSLH VV E E+QIR+ MH AE
Sbjct: 291 CRETLEIALSTFQSVEGRSKDYIANPKANGYQSLHAVVRDENETTFEIQIRSASMHRTAE 350
Query: 300 FGFAAHWRYKEGD-CQHSSFVLQMVEWARWVLTWQCEAMSKDR-------SCVGNGDSIK 351
FG AAHWRYKE + S+ V Q ++WAR++LTWQ E + + V G +++
Sbjct: 351 FGVAAHWRYKEHEKSATSAKVDQQIQWARFMLTWQNELDDQQKIRPARVAHAVDCGAALR 410
Query: 352 PPCTFPSHADDCPFSYKP------QCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL-LER 404
PC FP+H+ DC +S + + D P ++I + + ++V+E +ST+ DL LE
Sbjct: 411 -PCMFPTHSADCAYSREEGFCQSCEVEDDSPNYIITVVDGAVAVREIAQNSTLADLKLED 469
Query: 405 AGR-GSSRWSPYGFPLKEELRPRLNHKAVGDPRCK---LKMGDVVELTPA---IPDKSLT 457
A G +R S + + + R+N K++ LKMGDV+E+ P+KS
Sbjct: 470 AHVPGGARSSEF-YRVSS---VRVNKKSIATANASSTTLKMGDVIEVNRTRILSPNKSWD 525
Query: 458 E 458
E
Sbjct: 526 E 526
>gi|435854533|ref|YP_007315852.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
5150]
gi|433670944|gb|AGB41759.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
5150]
Length = 722
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 157/336 (46%), Positives = 220/336 (65%), Gaps = 11/336 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+P+L H + A +LA + + + A LLHD ++D ++ D I FGA + LV
Sbjct: 37 MRVSGEPFLSHPLRVAQILAELELDVVSITAALLHDVVEDTEITADEIEEEFGAEIRLLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL+++ RE + A+ L MFLAMA D R VLIKLADRLHNM TL+ L
Sbjct: 97 NGVTKLNKIDFKTREEHQAAS------LRKMFLAMAEDIRVVLIKLADRLHNMRTLNYLS 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
KR+R A ETLEI+ PLA+RLG+S K +LE+L F++L PD++ EL++KL + EA
Sbjct: 151 EEKRKRKANETLEIYAPLAHRLGMSRLKWELEDLSFRYLEPDKYHELANKLAKNRAEREA 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ LE L+D +I + GR K LYSI+ K++ K + DEI+D+ LR+IV++
Sbjct: 211 YIEDVIDTLEGKLEDVDIQGKI-YGRPKHLYSINQKIINKNKSFDEIYDLTALRVIVDSV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CYQ L ++H++W +PG++KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 270 KECYQVLGILHEIWNPMPGRIKDYIAMPKSNMYQSLHTTVIGPKGEPLEIQIRTWEMHRT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHWRYK+G+ + F + + W R +L WQ
Sbjct: 330 AEYGIAAHWRYKDGNPEDDDFE-KKISWLRQLLEWQ 364
>gi|254479350|ref|ZP_05092687.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
gi|214034716|gb|EEB75453.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
Length = 720
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/471 (38%), Positives = 258/471 (54%), Gaps = 55/471 (11%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H VE A +LA + + T +AAGLLHD ++D ++YD + FG +ADLV
Sbjct: 39 VRNSGEPYIVHPVEVAYILADLELDLTTIAAGLLHDVIEDTGVTYDQLMEEFGKEIADLV 98
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ +A+ + M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 99 DGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLP 152
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P+++ +L K+ E
Sbjct: 153 PDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKEREE 212
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I ++Q L + I V GR K YSI+ KM + T +EI+D+ +R+IV
Sbjct: 213 FIQNIIATIKQKLDEMGIPAEV-DGRPKHFYSIYKKMKTQNKTFEEIYDLLAIRIIVNTV 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P EVQIRT EMH
Sbjct: 272 KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEVQIRTWEMHKT 331
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFP 357
AE+G AAHWRYKEG F ++V W R +L WQ E +K P F
Sbjct: 332 AEYGIAAHWRYKEGKTTEDEFDKKLV-WLRQLLEWQKE--------------LKDPKEFM 376
Query: 358 SHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGF 417
F+ VFV + D +S P ST +D + +
Sbjct: 377 ETLKIDLFT--------DEVFVFTPKGDVIS---LPAGSTPID--------------FAY 411
Query: 418 PLKEELRPRLNHKAVGDP----RCKLKMGDVVELTPAIPDKSLTEYREEIQ 464
+ E+ R+N V +LK GD+VE+ + P+K R+ +Q
Sbjct: 412 SIHTEIGHRMNGAKVNGRIVPINYQLKTGDIVEILVS-PNKDRGPSRDWLQ 461
>gi|345017525|ref|YP_004819878.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032868|gb|AEM78594.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 719
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/338 (44%), Positives = 215/338 (63%), Gaps = 11/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY++H +E A +LA + + T +AAGLLHD ++D ++YD + FG +ADLV
Sbjct: 37 MRNSGEPYIVHPIEVAFILADLELDITTIAAGLLHDVIEDTDVTYDQLMENFGKEIADLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ +A+ + M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 97 DGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
L K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P+++ +L K+ E
Sbjct: 151 LDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKEREE 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I +++ LK+ I V GR K YSI+ KM + T ++I+D+ +R+IV
Sbjct: 211 FIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRIIVNTV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT EMH
Sbjct: 270 KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWEMHKT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 330 AEYGIAAHWKYKEGKTTEDEFD-QKLSWLRQLLEWQKE 366
>gi|20807650|ref|NP_622821.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Thermoanaerobacter tengcongensis MB4]
gi|20516195|gb|AAM24425.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Thermoanaerobacter tengcongensis MB4]
Length = 718
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/471 (38%), Positives = 258/471 (54%), Gaps = 55/471 (11%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H VE A +LA + + T +AAGLLHD ++D ++YD + FG +ADLV
Sbjct: 37 VRNSGEPYIVHPVEVAYILADLELDLTTIAAGLLHDVIEDTGVTYDQLMEEFGKEIADLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ +A+ + M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 97 DGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P+++ +L K+ E
Sbjct: 151 PDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKEREE 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I ++Q L + I V GR K YSI+ KM + T +EI+D+ +R+IV
Sbjct: 211 FIQNIIATIKQKLDEMGIPAEV-DGRPKHFYSIYKKMKTQNKTFEEIYDLLAIRIIVNTV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P EVQIRT EMH
Sbjct: 270 KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEVQIRTWEMHKT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFP 357
AE+G AAHWRYKEG F ++V W R +L WQ E +K P F
Sbjct: 330 AEYGIAAHWRYKEGKTTEDEFDKKLV-WLRQLLEWQKE--------------LKDPKEFM 374
Query: 358 SHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGF 417
F+ VFV + D +S P ST +D + +
Sbjct: 375 ETLKIDLFT--------DEVFVFTPKGDVIS---LPAGSTPID--------------FAY 409
Query: 418 PLKEELRPRLNHKAVGDP----RCKLKMGDVVELTPAIPDKSLTEYREEIQ 464
+ E+ R+N V +LK GD+VE+ + P+K R+ +Q
Sbjct: 410 SIHTEIGHRMNGAKVNGRIVPINYQLKTGDIVEILVS-PNKDRGPSRDWLQ 459
>gi|167037441|ref|YP_001665019.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115854|ref|YP_004186013.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856275|gb|ABY94683.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928945|gb|ADV79630.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 719
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/338 (44%), Positives = 215/338 (63%), Gaps = 11/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY++H +E A +LA + + T +AAGLLHD ++D ++YD + FG +ADLV
Sbjct: 37 MRNSGEPYIVHPIEVAFILADLELDITTIAAGLLHDVIEDTDVTYDQLMENFGKEIADLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ +A+ + M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 97 DGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
L K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P+++ +L K+ E
Sbjct: 151 LDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKEREE 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I +++ LK+ I V GR K YSI+ KM + T ++I+D+ +R+IV
Sbjct: 211 FIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRIIVNTV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT EMH
Sbjct: 270 KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWEMHKT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 330 AEYGIAAHWKYKEGKTTEDEFD-QKLSWLRQLLEWQKE 366
>gi|428208449|ref|YP_007092802.1| (p)ppGpp synthetase I SpoT/RelA [Chroococcidiopsis thermalis PCC
7203]
gi|428010370|gb|AFY88933.1| (p)ppGpp synthetase I, SpoT/RelA [Chroococcidiopsis thermalis PCC
7203]
Length = 763
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/338 (47%), Positives = 216/338 (63%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G S ++AAG LHD ++D ++ + I + FGA V LVE
Sbjct: 61 RKSGEPYICHPVAVAGLLRDLGGGSAMIAAGFLHDVVEDTDVTLEDIEQQFGAEVKHLVE 120
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+ S E ++ +A+ MFLAMA D R +++KLADRLHNM TL+ LP
Sbjct: 121 GVTKLSKFS----ETFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEHLPD 176
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
KR+R A ET EIF PLANRLGI T+K +LE+L FK+L P+ + ++ + E EA
Sbjct: 177 EKRRRIALETREIFAPLANRLGIGTFKWELEDLTFKYLEPEAYRQIQDLVAEKRTDREAR 236
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+T IE L+Q + +I + + GR K LY I+ KM +++ EI+D+ +R+IV+ E
Sbjct: 237 LTRVIEVLQQGMAQSHIQCIDISGRPKHLYGIYQKMQRQQKEFHEIYDLAAIRIIVKTNE 296
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH A
Sbjct: 297 ECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTTVVGFTGRPLEVQIRTIDMHHIA 356
Query: 299 EFGFAAHWRYKE-GDCQHSSF--VLQMVEWARWVLTWQ 333
E+G AAHW+YKE G H+ F V + W R +L WQ
Sbjct: 357 EYGIAAHWKYKETGGSSHTKFTPVDEKFTWLRQLLEWQ 394
>gi|326390128|ref|ZP_08211689.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
gi|325993776|gb|EGD52207.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
Length = 719
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/338 (44%), Positives = 215/338 (63%), Gaps = 11/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY++H +E A +LA + + T +AAGLLHD ++D ++YD + FG +ADLV
Sbjct: 37 MRNSGEPYIVHPIEVAYILADLELDITTIAAGLLHDVIEDTDVTYDQLMENFGKEIADLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ +A+ + M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 97 DGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
L K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P+++ +L K+ E
Sbjct: 151 LDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKEREE 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I +++ LK+ I V GR K YSI+ KM + T ++I+D+ +R+IV
Sbjct: 211 FIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRIIVNTV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT EMH
Sbjct: 270 KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWEMHKT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 330 AEYGIAAHWKYKEGKTTEDEFD-QKLSWLRQLLEWQKE 366
>gi|392941128|ref|ZP_10306772.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
gi|392292878|gb|EIW01322.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
Length = 719
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/338 (44%), Positives = 215/338 (63%), Gaps = 11/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY++H +E A +LA + + T +AAGLLHD ++D ++YD + FG +ADLV
Sbjct: 37 MRNSGEPYIVHPIEVAYILADLELDITTIAAGLLHDVIEDTDVTYDQLMENFGKEIADLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ +A+ + M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 97 DGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
L K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P+++ +L K+ E
Sbjct: 151 LDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKEREE 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I +++ LK+ I V GR K YSI+ KM + T ++I+D+ +R+IV
Sbjct: 211 FIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRIIVNTV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT EMH
Sbjct: 270 KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWEMHKT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 330 AEYGIAAHWKYKEGKTTEDEFD-QKLSWLRQLLEWQKE 366
>gi|159902750|ref|YP_001550094.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. MIT 9211]
gi|159887926|gb|ABX08140.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9211]
Length = 776
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 166/343 (48%), Positives = 210/343 (61%), Gaps = 11/343 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA TV+AAGLLHD ++D L+ + + FG VA LV
Sbjct: 84 FRASGDPYIVHPVAVADLLQEIGAGPTVIAAGLLHDAIEDTDLTLEQLQSFFGNEVAGLV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + + T +A+ L MFLAMA D R VL+KLADRLHNM TLD+L
Sbjct: 144 EGVTKLGGI------HVTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTLDSLQ 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+QR A ET EI+ PLANRLGI +K +LE+L FK L PD + E+ ++V E
Sbjct: 198 SDKQQRIALETREIYAPLANRLGIGRFKWELEDLAFKLLEPDSYREIQQEVVTKRSEREK 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ IE L L ++ + GR K L+ I KM +++ EI+DI LR+IV N
Sbjct: 258 RLDKTIELLRTKLLAAGLTEYEINGRPKHLFGIWGKMERQQKEFHEIYDIAALRIIVPNL 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 318 ETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTPEMHQV 376
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
AEFG AAHW+YKEG S + W R ++ WQ E + D
Sbjct: 377 AEFGIAAHWKYKEGGSPASGNT-ERFNWLRQLVEWQQEGGNDD 418
>gi|28211806|ref|NP_782750.1| GTP pyrophosphokinase [Clostridium tetani E88]
gi|28204248|gb|AAO36687.1| putative GTP pyrophosphokinase [Clostridium tetani E88]
Length = 731
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 218/338 (64%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A +LA +G ++ + AGLLHD ++D +Y+ + R F VADLVE
Sbjct: 37 RESGEPYIVHPVEVACILADMGMDADTIVAGLLHDVIEDTEYTYEDVEREFNKQVADLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +AD + M LAMA D R +LIKLADRLHNM TL +P+
Sbjct: 97 GVTKLGKIKYKSKEEQ------QADNVRKMLLAMAQDVRVILIKLADRLHNMRTLKYMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKET +I+ PLA+RLGIS K +LE+L F+++NP+++ ++ E E A
Sbjct: 151 EKQKEKAKETFDIYAPLAHRLGISKIKWELEDLAFRYINPNEYYSFVKEIAERRVERIAY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + +L ++L+ I + GR K YSI+ KM+ K T+D+I D+ +R++V+ +
Sbjct: 211 IELIVNELTKSLEGSGIKSDI-EGRPKHFYSIYRKMINKNKTLDQIFDLTAIRILVDTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL +VH ++ +PG+ KDYI PK N YQSLH+ V G P E+QIRT EMH A
Sbjct: 270 DCYAALGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPFEIQIRTFEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG + ++ L++ W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEGITEENNMELKLT-WLREILEWQRET 366
>gi|300914191|ref|ZP_07131507.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307724574|ref|YP_003904325.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter sp. X513]
gi|300889126|gb|EFK84272.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307581635|gb|ADN55034.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X513]
Length = 719
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/338 (44%), Positives = 214/338 (63%), Gaps = 11/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H +E A +LA + + T +AAGLLHD ++D ++Y + FG +ADLV
Sbjct: 37 IRNSGEPYIIHPIEVAYILAELELDITTIAAGLLHDVIEDTDVTYGQLLEYFGKEIADLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ +A+ + M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 97 DGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
L K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+PD++ +L K+ E
Sbjct: 151 LDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPDEYYDLVEKVAAKRKEREE 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I +++ LK+ I V GR K YSI+ KM + T ++I+D+ +R+IV
Sbjct: 211 FIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRIIVNTV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT EMH
Sbjct: 270 KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWEMHKT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 330 AEYGIAAHWKYKEGKTSEDEFD-QKLSWLRQLLEWQKE 366
>gi|297544507|ref|YP_003676809.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842282|gb|ADH60798.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 719
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/338 (44%), Positives = 215/338 (63%), Gaps = 11/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY++H +E + +LA + + T +AAGLLHD ++D ++Y+ + FG +ADLV
Sbjct: 37 MRNSGEPYIVHPIEVSYILADLELDITTIAAGLLHDVIEDTDVTYEQLLEKFGKEIADLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ +A+ + M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 97 DGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+PD++ +L K+ E
Sbjct: 151 PDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPDEYYDLVEKVAAKRKEREE 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ + I +++ LK+ I V GR K YSI+ KM + + D+I+D+ +R+IV
Sbjct: 211 LIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKSFDQIYDLLAVRIIVNTV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT EMH
Sbjct: 270 KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWEMHKT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 330 AEYGIAAHWKYKEGKTTEDKFD-QKLSWLRQLLEWQKE 366
>gi|289578226|ref|YP_003476853.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter italicus Ab9]
gi|289527939|gb|ADD02291.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter italicus Ab9]
Length = 719
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 215/338 (63%), Gaps = 11/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY++H +E + +LA + + T +AAGLLHD ++D ++Y+ + FG +ADLV
Sbjct: 37 MRNSGEPYIVHPIEVSYILADLELDITTIAAGLLHDVIEDTDVTYEQLLEKFGKEIADLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ +A+ + M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 97 DGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+PD++ +L K+ E
Sbjct: 151 PDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPDEYYDLVEKVAAKRKEREE 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ + I +++ LK+ I V GR K YSI+ KM + + D+I+D+ +R+IV
Sbjct: 211 LIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKSFDQIYDLLAVRIIVNTV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY L +VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT EMH
Sbjct: 270 KECYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWEMHKT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 330 AEYGIAAHWKYKEGKTTEDKFD-QKLSWLRQLLEWQKE 366
>gi|254424339|ref|ZP_05038057.1| RelA/SpoT family protein [Synechococcus sp. PCC 7335]
gi|196191828|gb|EDX86792.1| RelA/SpoT family protein [Synechococcus sp. PCC 7335]
Length = 771
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 213/340 (62%), Gaps = 11/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASG+PY+ H V A LL ++G +S ++AAG LHD ++D ++ D I FGA V LV
Sbjct: 77 MRASGEPYIAHPVAVAGLLRSLGGDSAMIAAGFLHDVVEDTEVTADEIGAIFGAEVRHLV 136
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KLS+ ++ +A+ MFLAMA D R +++KLADRLHNM TL L
Sbjct: 137 EGVTKLSKFEFDSKTEQ------QAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLQHLR 190
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLEIF PLANRLGI +K +LE+LCFK+L P+ + EL+ +V+ EA
Sbjct: 191 PDKQVRIARETLEIFAPLANRLGIGRFKWELEDLCFKYLEPEAYKELTQLIVDKRTDREA 250
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ L++ + I + R K LYSI+ KM +++ EI+DI +RL+V +
Sbjct: 251 RLQQVSHVLKEGISKLGIKCKDVSSRPKHLYSIYKKMQRQQKEFQEIYDIAAIRLLVNTK 310
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+AL V H L+ +PG+ KDYI PK N YQSLHTVV G P+EVQIRT EMH
Sbjct: 311 DECYRALAVAHDLYRPIPGRFKDYIGLPKPNRYQSLHTVVMGPHGRPIEVQIRTVEMHHI 370
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
AE+G AAHW+YKE H++ + W R +L WQ E
Sbjct: 371 AEYGIAAHWKYKESGNSHTTITQDDEKFTWLRQLLDWQNE 410
>gi|256752957|ref|ZP_05493784.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748165|gb|EEU61242.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 493
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 149/338 (44%), Positives = 214/338 (63%), Gaps = 11/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H +E A +LA + + T +AAGLLHD ++D ++Y + FG +ADLV
Sbjct: 37 IRNSGEPYIIHPIEVAYILAELELDITTIAAGLLHDVIEDTDVTYGQLLEYFGKEIADLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ +A+ + M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 97 DGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
L K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P+++ +L K+ E
Sbjct: 151 LDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKEREE 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I +++ LK+ I V GR K YSI+ KM + T ++I+D+ +R+IV
Sbjct: 211 FIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRIIVNTV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT EMH
Sbjct: 270 KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWEMHKT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 330 AEYGIAAHWKYKEGKTTEDEFD-QKLSWLRQLLEWQKE 366
>gi|221633684|ref|YP_002522910.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
gi|221157017|gb|ACM06144.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
Length = 720
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/346 (45%), Positives = 218/346 (63%), Gaps = 13/346 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL H + A++LA + + +AA LLHD L+D ++ + + FG VA LV+
Sbjct: 33 RRSGEPYLSHPLAVALILADLQLDQETIAAALLHDVLEDTDVTIEQLRERFGPRVARLVD 92
Query: 62 GVSKLSQLSKLARENNTAS----KTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLD 116
GV+KL ++ +L+ EN S K +A+ L M LAMA D VLIKLADRLHNM TLD
Sbjct: 93 GVTKLGKI-RLSPENEPVSLEREKIRQAESLRKMLLAMAEDVGVVLIKLADRLHNMRTLD 151
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD 175
LP K++R A+ET+EI+ PLANRLGI K +LE+L FK+L P + ++ L D
Sbjct: 152 HLPPEKQRRIARETMEIYAPLANRLGIGQLKAELEDLAFKYLEPQTYETIARALESRGHD 211
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + IE++++AL D I V+ GR K + SI KM +K+ DEI+D+ G+R+IV
Sbjct: 212 REQYLQEVIEQVKRALADAGIR-AVVTGREKHIASIARKMREKQRNFDEIYDVLGIRVIV 270
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ + DCY AL ++H +W +PG+ DYI PK N Y+SLHT V G +PLEVQIRT EM
Sbjct: 271 DEQRDCYAALAIIHGMWHPIPGQFDDYIANPKENLYRSLHTAVIGPRGIPLEVQIRTHEM 330
Query: 295 HLQAEFGFAAHWRYKEG---DCQHSSFVLQMVEWARWVLTWQCEAM 337
H +AE+G AAHWRYKE D S + + W R +L W+ E +
Sbjct: 331 HREAEYGIAAHWRYKEQLKPDSGDRSIEAK-IAWFRQILEWRDELL 375
>gi|126653971|ref|ZP_01725808.1| GTP pyrophosphokinase [Bacillus sp. B14905]
gi|126589528|gb|EAZ83670.1| GTP pyrophosphokinase [Bacillus sp. B14905]
Length = 731
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 221/342 (64%), Gaps = 14/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R+SG+PY++H V+ A +LA + + VAAG LHD ++D + D + R FG VA LV
Sbjct: 43 FRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTDFTRDDLVREFGEEVAVLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ L++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYLSKEAQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R +KETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + S + + DE A
Sbjct: 157 AEKQRRISKETLEIFAPLAHRLGISTVKWELEDTALRYLNPQQYYRIVSLMKKKRDEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + +++ L + I V GR K +YSI+ KM+ +K +EI+D+ +R++V++
Sbjct: 217 YLDNVMAEMKSQLNEVEIDADVY-GRPKHIYSIYRKMVLQKKQFNEIYDLLAIRVLVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH
Sbjct: 276 KDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDPLEVQIRTKEMHKI 335
Query: 298 AEFGFAAHWRYKEG---DCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG D Q + V Q + W R +L +Q E+
Sbjct: 336 AEYGIAAHWAYKEGRKVDHQKQN-VDQKLTWFREILEFQNES 376
>gi|169829352|ref|YP_001699510.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
gi|168993840|gb|ACA41380.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
Length = 731
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 221/342 (64%), Gaps = 14/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R+SG+PY++H V+ A +LA + + VAAG LHD ++D + D + R FG VA LV
Sbjct: 43 FRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTDFTRDDLVREFGEEVAVLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ L++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYLSKEAQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R +KETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + S + + DE A
Sbjct: 157 AEKQRRISKETLEIFAPLAHRLGISTVKWELEDTALRYLNPQQYYRIVSLMKKKRDEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + +++ L + I V GR K +YSI+ KM+ +K +EI+D+ +R++V++
Sbjct: 217 YLDNVMAEMKSQLNEVEIDADVY-GRPKHIYSIYRKMVLQKKQFNEIYDLLAIRVLVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH
Sbjct: 276 KDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDPLEVQIRTKEMHKI 335
Query: 298 AEFGFAAHWRYKEG---DCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG D Q + V Q + W R +L +Q E+
Sbjct: 336 AEYGIAAHWAYKEGKKADHQKQN-VDQKLTWFREILEFQNES 376
>gi|206901091|ref|YP_002250691.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
gi|206740194|gb|ACI19252.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
Length = 727
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 213/338 (63%), Gaps = 11/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY+ H VE A +L +G TV+ AGLLHD L+D + + I + FG V LV
Sbjct: 39 MRKSGEPYITHPVEVAKILMDLGMEETVIIAGLLHDVLEDTKVPKEEIEKEFGKDVLSLV 98
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
E ++KL +LS E A L MF+AMA D R ++IKLADRLHNM TL
Sbjct: 99 EAITKLEKLSFYPTE------AYRAQNLRKMFIAMAKDIRVIIIKLADRLHNMQTLQYHD 152
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R AKETLEI+ PLA+RLG+ K +LE+L F++L P+++ ++ K+ E E
Sbjct: 153 EEKQKRIAKETLEIYAPLAHRLGVWDIKWRLEDLAFRYLEPEKYHYVAKKVAETRKEREK 212
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ AIE +++ LK I+ V GR K LYSI+ KML++ + ++E++D+ G+R+IV +E
Sbjct: 213 FIEKAIEIIKEELKKTGINAEV-TGRAKHLYSIYQKMLRRGIEIEEMYDLLGVRVIVNSE 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+ L ++H LW VPG+ KDYI K N YQSLHT V PLEVQIRT EMH
Sbjct: 272 KECYEVLGIIHNLWKPVPGRFKDYIANKKSNNYQSLHTTVIAMDGKPLEVQIRTWEMHRV 331
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW YKE + + + + + W R +L WQ E
Sbjct: 332 AEYGIAAHWLYKE-EIKKPDYFEEKLSWLRQLLEWQKE 368
>gi|299535673|ref|ZP_07048994.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|424739057|ref|ZP_18167479.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
gi|298728873|gb|EFI69427.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|422946922|gb|EKU41324.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
Length = 731
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 221/342 (64%), Gaps = 14/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R+SG+PY++H V+ A +LA + + VAAG LHD ++D + D + R FG VA LV
Sbjct: 43 FRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTDFTRDDLVREFGEEVAVLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ L++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYLSKEAQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R +KETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + S + + DE A
Sbjct: 157 AEKQRRISKETLEIFAPLAHRLGISTVKWELEDTALRYLNPQQYYRIVSLMKKKRDEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + +++ L + I + GR K +YSI+ KM+ +K +EI+D+ +R++V++
Sbjct: 217 YLENVMAEMKSQLNEVEIDADIY-GRPKHIYSIYRKMVLQKKQFNEIYDLLAIRVLVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH
Sbjct: 276 KDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDPLEVQIRTKEMHKI 335
Query: 298 AEFGFAAHWRYKEG---DCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG D Q + V Q + W R +L +Q E+
Sbjct: 336 AEYGIAAHWAYKEGKNVDHQKQN-VDQKLTWFREILEFQNES 376
>gi|217967359|ref|YP_002352865.1| (p)ppGpp synthetase I SpoT/RelA [Dictyoglomus turgidum DSM 6724]
gi|217336458|gb|ACK42251.1| (p)ppGpp synthetase I, SpoT/RelA [Dictyoglomus turgidum DSM 6724]
Length = 727
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/338 (45%), Positives = 214/338 (63%), Gaps = 11/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H VE A +L +G TVV AGLLHD L+D ++ + I + FG V LV
Sbjct: 39 VRKSGEPYITHPVEVAKILMNLGMEETVVIAGLLHDVLEDTNVTKEEIEKEFGKDVLSLV 98
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
E ++KL +LS E A L MF+AMA D R ++IKLADRLHNM TL
Sbjct: 99 EAITKLEKLSFYPTE------AYRAQNLRKMFIAMAKDIRVIIIKLADRLHNMQTLQYHE 152
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R AKETLEI+ PLA+RLG+ K +LE+L F++L P+++ ++ K+ E E
Sbjct: 153 EEKQKRIAKETLEIYAPLAHRLGVWDIKWRLEDLAFRYLEPEKYHYVAKKVAETRKEREK 212
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ AIE +++ LK I+ V GR K LYSI+ KML++ + ++E++D+ G+R+IV +E
Sbjct: 213 FIEKAIEIIKEELKKAGINAEV-TGRAKHLYSIYQKMLRRGIEIEEMYDLLGVRVIVNSE 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+ L ++H LW VPG+ KDYI K N YQSLHT V PLEVQIRT EMH
Sbjct: 272 KECYEVLGIIHNLWKPVPGRFKDYIANKKSNNYQSLHTTVIAMDGKPLEVQIRTWEMHRI 331
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW YKE + SF + + W R +L WQ E
Sbjct: 332 AEYGIAAHWLYKEEIKKPDSFE-EKLSWLRQLLEWQKE 368
>gi|428223952|ref|YP_007108049.1| (p)ppGpp synthetase I SpoT/RelA [Geitlerinema sp. PCC 7407]
gi|427983853|gb|AFY64997.1| (p)ppGpp synthetase I, SpoT/RelA [Geitlerinema sp. PCC 7407]
Length = 763
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/339 (46%), Positives = 207/339 (61%), Gaps = 13/339 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY+ H V A LL +G + ++AAG LHD ++D ++ D I FG V +V
Sbjct: 65 FRASGEPYIAHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVTADEIEERFGPEVRQMV 124
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
EGV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 125 EGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHL 177
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
P KR+R A ET EIF PLANRLGI K +LE+L FK+L PD + ++ S + E E
Sbjct: 178 PDVKRRRIAMETREIFAPLANRLGIGRVKWELEDLAFKYLEPDAYRQMQSLVSEKRGSRE 237
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ + L + I + + GR K LYSI+ KM ++ EI DI +R+IVE+
Sbjct: 238 DRIAQVTDVLRDRMAQSGIRCVDISGRPKHLYSIYQKMQRQHKEFHEIFDIAAIRIIVES 297
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
E+CY+AL +VH + +PG+ KDYI PK N YQSLHTVV G PLEVQIRT EMH
Sbjct: 298 NEECYRALAIVHDAFKPIPGRFKDYIGLPKPNRYQSLHTVVVGNMGRPLEVQIRTLEMHQ 357
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE S F + W R +L WQ
Sbjct: 358 IAEYGIAAHWKYKESGHSSSKFTASDEKFTWLRQLLEWQ 396
>gi|411116988|ref|ZP_11389475.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoriales
cyanobacterium JSC-12]
gi|410713091|gb|EKQ70592.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoriales
cyanobacterium JSC-12]
Length = 751
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/342 (45%), Positives = 217/342 (63%), Gaps = 17/342 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY++H V A LL +G S ++AAG LHD ++D ++ D + FG V LVE
Sbjct: 60 RASGEPYIIHPVAVAGLLRDLGGGSVMIAAGFLHDVVEDTDVTADELETLFGKEVRTLVE 119
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ LP
Sbjct: 120 GVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEHLP 172
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
KR++ A ET EIF PLANRLGI +K +LE+L FK+L PD + + + E EA
Sbjct: 173 DAKRRQIALETREIFAPLANRLGIGRFKWELEDLAFKYLEPDAYRNVQELVAEKRTDREA 232
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+++ + L + L I + GR K LY I+ KM +++ +EI+D+ +R+IV++
Sbjct: 233 RLSNIVSALRERLTQVGIRVFDISGRPKHLYGIYQKMQRQQKGYEEIYDVAAVRIIVDSN 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY++L +VH ++ +PG+ KDYI PK N YQSLHTVV G PLEVQIRT EMH
Sbjct: 293 EECYRSLAIVHDMFRPIPGRFKDYIGLPKPNRYQSLHTVVIGNTGRPLEVQIRTLEMHHV 352
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQCE 335
AE+G AAHW+YKE +SS L ++ W R +L WQ +
Sbjct: 353 AEYGIAAHWKYKE--TGNSSTPLTGMDEKFTWLRQLLDWQSD 392
>gi|87123541|ref|ZP_01079392.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9917]
gi|86169261|gb|EAQ70517.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9917]
Length = 777
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/343 (46%), Positives = 206/343 (60%), Gaps = 10/343 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA++ V+AAG LHD ++D L+ + FGA V +LV
Sbjct: 84 FRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTDLTPAQLESHFGAEVRELV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 144 EGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTLGALK 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
KRQR A+ET EI+ PLANRLGI +K +LE+L FK L PD E+ ++ E
Sbjct: 198 EEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPDAFREIQQEVATKRSEREE 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L L + + GR K LY I KM +++ EI+D+ LR++ N
Sbjct: 258 RLGVTVKLLSDRLAAVGLDSCEVSGRPKHLYGIWSKMQRQQKAFHEIYDVAALRILTPNV 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 318 ESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTLEMHQV 376
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
AEFG AAHW+YKEG + + W R ++ WQ E + D
Sbjct: 377 AEFGIAAHWKYKEGGSPAAGGDTERFNWLRQLVDWQQEGGADD 419
>gi|397906545|ref|ZP_10507345.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
australicus RC3]
gi|397160502|emb|CCJ34682.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
australicus RC3]
Length = 722
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 214/343 (62%), Gaps = 18/343 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+LH VE A++L +G ++ + A LLHD ++D LSY+ + R F +ADLV
Sbjct: 36 LRESGDPYILHPVEVAIILVEMGLDTDAICAALLHDVVEDTHLSYEDVKREFNESIADLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ + + +AMA D R +LIKLADRLHNM TL LP
Sbjct: 96 DGVTKLGKIEYKSKEEQ------QAENIRKVLIAMAKDIRVILIKLADRLHNMRTLKYLP 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL----VECFD 175
K++ A+ETL+I+ PLA+RLGIS K +LE+L ++L+PD++ EL SK+ E
Sbjct: 150 PEKQKAKAEETLDIYAPLAHRLGISKIKWELEDLSLRYLHPDEYYELVSKVQKKRAEREK 209
Query: 176 EAMVTSAI--EKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
E I EKLEQA +I GR K YSI+ KM K T D+I D+ +R+I
Sbjct: 210 EINEIKNILQEKLEQAGIKADID-----GRPKHFYSIYRKMHYKNKTFDQIFDLLAVRVI 264
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V+ +DCY AL +VH LW +PG+ KDYI PK N YQSLH+ V G P E+QIRT E
Sbjct: 265 VDTVKDCYAALGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHSTVIGPNGQPFEIQIRTWE 324
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
MH AE+G AAHW+YKEG + + + W R +L Q EA
Sbjct: 325 MHRTAEYGIAAHWKYKEGINNKELDIDEKLHWLRQILELQKEA 367
>gi|428305760|ref|YP_007142585.1| (p)ppGpp synthetase I SpoT/RelA [Crinalium epipsammum PCC 9333]
gi|428247295|gb|AFZ13075.1| (p)ppGpp synthetase I, SpoT/RelA [Crinalium epipsammum PCC 9333]
Length = 761
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 213/340 (62%), Gaps = 12/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ H V A LL +G + ++AAG LHD ++D ++ D + + FG V LVE
Sbjct: 70 RASGEPYICHPVAVAGLLRDLGGSGAMIAAGFLHDIVEDTDVTSDDLEKMFGKEVRQLVE 129
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+L N ++ K +A+ MF+AMA D R +++KLADRLHNM TL+ LP
Sbjct: 130 GVTKLSKL------NFSSKKERQAENFRRMFIAMAHDIRVIVVKLADRLHNMRTLEHLPD 183
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
KR+R A ET EIF PLANRLGI +K +LE+L FK+L P+ + ++ + E EA
Sbjct: 184 EKRRRIALETREIFAPLANRLGIGRFKWELEDLAFKYLEPEAYRKIQLLVAEKRTDREAR 243
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+T+ E L+Q L I L L GR K LY I+ KM +++ EI D+ +R++V+ E
Sbjct: 244 LTNVTEILQQGLTASGIECLELSGRPKHLYGIYQKMQRQQKEFSEIFDLAAIRILVKTNE 303
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL VVH + +PG+ KDYI PK N YQSLHT V PLE+QIRT++MH A
Sbjct: 304 ECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTTVVSLNGRPLEIQIRTQQMHHIA 363
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
E+G AAHW+YKE + S V E W R +L WQ E
Sbjct: 364 EYGIAAHWKYKETGNSNRSKVTGTDEKFTWLRQLLDWQNE 403
>gi|123965455|ref|YP_001010536.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9515]
gi|123199821|gb|ABM71429.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9515]
Length = 769
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 214/345 (62%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASG+PY++H + A LL IGA+S+V+AAGLLHD ++D ++ I FG V LV
Sbjct: 78 LRASGEPYIIHPIAVADLLKEIGASSSVIAAGLLHDVVEDTGIALSEIEINFGLEVKVLV 137
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + NN +A+ L MFLAMA D R VL+KLADRLHNM T+ L
Sbjct: 138 EGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVVLVKLADRLHNMRTIQWLN 191
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
+++R A+ET EI+ PLANRLGI+ +K +LE+L FK L PD++ L ++V E
Sbjct: 192 EERKERIARETREIYAPLANRLGINRFKWELEDLAFKFLEPDEYKNLKDQIVVKRSDREK 251
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + +++ L + + GR K LY I KM +++ EI+D+ LR+IV N
Sbjct: 252 RLDNTLNLMKENLVSSGLKNFEITGRPKHLYGIWSKMERQQKQFSEIYDVAALRIIVSNL 311
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G+ P+EVQIRT MH
Sbjct: 312 DSCYKALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTSVIGKHR-PIEVQIRTTSMHQI 370
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
AEFG AAHW+YKEG SS + W R ++ WQ E KD +
Sbjct: 371 AEFGIAAHWQYKEGGSPASSNA-ERFNWLRQLVEWQQEGNEKDHN 414
>gi|352095563|ref|ZP_08956577.1| (p)ppGpp synthetase I, SpoT/RelA [Synechococcus sp. WH 8016]
gi|351678705|gb|EHA61850.1| (p)ppGpp synthetase I, SpoT/RelA [Synechococcus sp. WH 8016]
Length = 778
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 163/345 (47%), Positives = 210/345 (60%), Gaps = 14/345 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ D + FG V +LV
Sbjct: 84 FRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPDQLESHFGPEVRELV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 144 EGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTLGALK 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD----QHTELSSKLVECFD 175
KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+S+K E D
Sbjct: 198 EEKRQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVSTKRSERED 257
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
VT ++ L L + + GR K LY I KM +++ EI+D+ LR++
Sbjct: 258 RLSVT--VQLLCDRLAAVGLDSCEVSGRPKHLYGIWTKMQRQQKEFHEIYDVAALRILAP 315
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 316 NVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTWEMH 374
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
+EFG AAHW+YKEG + + W R ++ WQ E S D
Sbjct: 375 QVSEFGIAAHWKYKEGGSPATGGDTERFNWLRQLVDWQQEGGSDD 419
>gi|16330670|ref|NP_441398.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|383322412|ref|YP_005383265.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325581|ref|YP_005386434.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491465|ref|YP_005409141.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436732|ref|YP_005651456.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|451814828|ref|YP_007451280.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|6647853|sp|P74007.1|SPOT_SYNY3 RecName: Full=Probable guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|1653162|dbj|BAA18078.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|339273764|dbj|BAK50251.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|359271731|dbj|BAL29250.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274901|dbj|BAL32419.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278071|dbj|BAL35588.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958589|dbj|BAM51829.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|451780797|gb|AGF51766.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
Length = 760
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 215/340 (63%), Gaps = 12/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G + ++AAG LHD ++D +S + I FG A LVE
Sbjct: 70 RKSGEPYIAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDISIEQIEALFGEETASLVE 129
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+ N +++ +A+ MFLAMA D R +++KLADRLHNM TLDAL
Sbjct: 130 GVTKLSKF------NFSSTTEHQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLDALSP 183
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++R A+ET +IF PLANRLGI +K +LE+L FK+L PD + ++ S +VE E+
Sbjct: 184 EKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPDSYRKIQSLVVEKRGDRESR 243
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + + L L+D+ I L GR K LY I+ KM + +EI+DI LR+IVE++
Sbjct: 244 LETVKDMLRFRLRDEGIEHFELQGRPKHLYGIYYKMTSQDKAFEEIYDIAALRIIVESKG 303
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL VVH ++ +PG+ KDYI PK N YQSLHT V G PLE+QIRT+EMH A
Sbjct: 304 ECYRALSVVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTVLGLTSRPLEIQIRTEEMHHVA 363
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
E+G AAHW+YKE ++ + E W R +L WQ +
Sbjct: 364 EYGIAAHWKYKESGGSENATLTSTDEKFTWLRQLLDWQSD 403
>gi|308801048|ref|XP_003075305.1| putative plastid (ISS) [Ostreococcus tauri]
gi|116061859|emb|CAL52577.1| putative plastid (ISS), partial [Ostreococcus tauri]
Length = 529
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 161/416 (38%), Positives = 236/416 (56%), Gaps = 25/416 (6%)
Query: 7 PYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKL 66
P+ CVETA+ LA +G ++ VA GLLHDTLD D + F + LV +S++
Sbjct: 94 PHFDRCVETAVTLAKLGMDTKTVAVGLLHDTLDVTSCEVDELRERFSDEIVSLVVDLSRV 153
Query: 67 SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRF 126
++SKL R + + E + M LAM DAR V++KL RL M L + ++Q+F
Sbjct: 154 HRVSKLHRASGRRLEVEERAQFRAMLLAMTDARVVIVKLTARLIKMRNLQSTSASQQQKF 213
Query: 127 AKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKL 186
A+ETL I+ PLA RLGI K +LE+L FK +NP + E+S L + M+ SA+ KL
Sbjct: 214 AEETLNIYAPLAARLGIFAVKNELEDLTFKWMNPAAYAEISQVLDQ---REMIVSALTKL 270
Query: 187 EQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG-------LRLIVENEED 239
++ L +N + LCGR KS+YS++ KM+ K +DEI D+ E+E
Sbjct: 271 DEGLASRNAQVVDLCGRQKSVYSVYKKMMDKGHKLDEIMDLRAIRIIIADGDDDDESERT 330
Query: 240 CYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAE 299
C + L VH ++ V G++KDYI PK NGYQSLH+ V E E+QIR+ MH AE
Sbjct: 331 CREVLESVHSIFTPVKGRLKDYIANPKENGYQSLHSCVRDEAGTTFEIQIRSASMHRTAE 390
Query: 300 FGFAAHWRYKEGDCQHSS-FVLQMVEWARWVLTWQCEAMSKDR-------SCVGNGDSIK 351
+G AAHWRYKE + +S V Q ++WAR++L+WQ E + + + V G S+
Sbjct: 391 YGVAAHWRYKENEKSTTSPKVDQQIQWARFMLSWQNELDDQQKIRPLRTAAAVDCGASLM 450
Query: 352 PPCTFPSHADDCPFS----YKPQCSHD--GPVFVIMIENDKMSVQEFPTSSTVMDL 401
PC FP+HA DC F+ + C + P +VI++ + +S++E +T+ DL
Sbjct: 451 -PCMFPTHAHDCMFNTAEGFCQTCDAEDASPHYVIVVVDGAVSIREVKPENTLADL 505
>gi|393200222|ref|YP_006462064.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
gi|406667432|ref|ZP_11075190.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
gi|327439553|dbj|BAK15918.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
gi|405384800|gb|EKB44241.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
Length = 731
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/341 (43%), Positives = 220/341 (64%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R+SG+PY++H V+ A +LA + + VAAG LHD ++D ++ + + F VA LV
Sbjct: 43 FRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTEVTREDLVNEFSEEVAKLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYMSKEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R ++ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + S + + DE A
Sbjct: 157 AEKQRRISQETLEIFAPLAHRLGISKVKWELEDTALRYLNPQQYYRIVSLMKKKRDEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + ++++ LK+ I + GR K LYSI+ KM+ +K +EI+D+ +R++V++
Sbjct: 217 YLDNVMDEINSQLKEVEIEADIF-GRPKHLYSIYRKMVLQKKQFNEIYDLLAVRILVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY + ++H LW +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH
Sbjct: 276 KDCYAVIGIIHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDPLEVQIRTKEMHKI 335
Query: 298 AEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG Q++ + Q + W R +L +Q E+
Sbjct: 336 AEFGIAAHWAYKEGKTVEQNAETIDQKLTWFREILEFQNES 376
>gi|313672627|ref|YP_004050738.1| (p)ppGpp synthetase I SpoT/RelA [Calditerrivibrio nitroreducens DSM
19672]
gi|312939383|gb|ADR18575.1| (p)ppGpp synthetase I, SpoT/RelA [Calditerrivibrio nitroreducens
DSM 19672]
Length = 710
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 212/337 (62%), Gaps = 19/337 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H + A++LA + + V AG+LHDTL+D +Y+ + FG VA LV
Sbjct: 42 LRKSGEPYLSHPLNVALILANMNMDLDTVTAGILHDTLEDTDATYEELAELFGEDVAFLV 101
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GVSK+ ++S + E A + M ++M+ D R ++IKLADRLHNM TLD L
Sbjct: 102 DGVSKIGKISFKSSEEKMA------ENFRKMLISMSKDVRVIVIKLADRLHNMRTLDYLS 155
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K+QR AKET+EI+ PLA+RLGI+ K +LE+L F+ LNPD++ E+ + KL EA
Sbjct: 156 EEKKQRIAKETMEIYAPLAHRLGIAWIKWELEDLSFRILNPDKYYEIYNLVKLKRSEREA 215
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I L+ LK+ NI V GR K YSI+ KM+KKK + DEI+D+ +R+IV+
Sbjct: 216 YLNQVINLLDAHLKNVNIQAEV-TGRPKHFYSIYSKMIKKKTSFDEIYDLLAVRVIVKTV 274
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L ++H LW +PG+ KDYI PK N YQSLHT V G + +E+QIRT+EMH
Sbjct: 275 SDCYATLGIIHNLWKPIPGRFKDYIAMPKANMYQSLHTTVVGPNGLNVEIQIRTEEMHRI 334
Query: 298 AEFGFAAHWRYKEGDC----QHSSFVLQMVEWARWVL 330
AE G AAHW+YKEG ++FV W R +L
Sbjct: 335 AEEGIAAHWKYKEGKVFNPKDDTTFV-----WLRQLL 366
>gi|296187176|ref|ZP_06855573.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
gi|296048211|gb|EFG87648.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
Length = 724
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 216/338 (63%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A +LA +G +++ + AGLLHD ++D +Y+ I F VA+LV+
Sbjct: 37 RESGEPYIMHPVEVACILAEMGMDTSTITAGLLHDVIEDTEYTYEDICSEFSVEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAMA D R +LIKLADR+HNM TL +P+
Sbjct: 97 GVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVILIKLADRMHNMRTLKYMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKET +I+ PLA+RLG+S K +LE+L F+++NP+++ + K+ E +E
Sbjct: 151 EKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINPNEYYFIVRKISEKREEREEY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I++LE L IS + GR K YSI+ KM+ K T+D+I D+ +R++VE +
Sbjct: 211 IGEVIQQLENNLDRAGISSEI-DGRPKHFYSIYRKMVNKNKTIDQIFDLTAVRILVETVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL +VH ++ +PG+ KDYI PK N YQSLH+ V G P E+QIRT MH A
Sbjct: 270 DCYAALGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPFEIQIRTFAMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG + + + + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEG-VETADDIDKKLTWLREILEWQRET 366
>gi|255526671|ref|ZP_05393576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
gi|255509651|gb|EET85986.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
Length = 724
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 216/338 (63%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A +LA +G +++ + AGLLHD ++D +Y+ I F VA+LV+
Sbjct: 37 RESGEPYIMHPVEVACILAEMGMDTSTITAGLLHDVIEDTEYTYEDICSEFSVEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAMA D R +LIKLADR+HNM TL +P+
Sbjct: 97 GVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVILIKLADRMHNMRTLKYMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKET +I+ PLA+RLG+S K +LE+L F+++NP+++ + K+ E +E
Sbjct: 151 EKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINPNEYYFIVRKISEKREEREEY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I++LE L IS + GR K YSI+ KM+ K T+D+I D+ +R++VE +
Sbjct: 211 IGEVIQQLENNLDRAGISSEI-DGRPKHFYSIYRKMVNKNKTIDQIFDLTAVRILVETVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL +VH ++ +PG+ KDYI PK N YQSLH+ V G P E+QIRT MH A
Sbjct: 270 DCYAALGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPFEIQIRTFAMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG + + + + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEG-VETADDIDKKLTWLREILEWQRET 366
>gi|291545648|emb|CBL18756.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus sp. SR1/5]
Length = 774
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 224/345 (64%), Gaps = 12/345 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D +++Y+ + + FG+ VA LV+
Sbjct: 79 RKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDAVEDTWMTYEEVEKEFGSEVALLVD 138
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS + V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 139 GVTKLGQLS-----YSKDKVEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRP 193
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAM 178
K+Q A+ET++I+ P+A RLGIS KV+L++L K+L PD + +L K L + E
Sbjct: 194 EKQQEKARETMDIYAPIAMRLGISKIKVELDDLSLKYLKPDVYYDLVEKVALRKSAREEF 253
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V S +++++Q ++D NI V GR K +SI+ KM+ + T+D+I+D++ +R+IV+ +
Sbjct: 254 VNSIVKQVKQHMEDANIRAQV-DGRVKHFFSIYKKMVNQDKTIDQIYDLFAVRIIVDTVK 312
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 313 DCYAALGVIHEMYKPIPGRFKDYIAMPKANMYQSLHTTLIGPNGQPFEIQIRTFEMHKTA 372
Query: 299 EFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEAMSKDR 341
E+G AAHW+YKE + + + W R +L WQ + MS +R
Sbjct: 373 EYGIAAHWKYKETSDGKKPGKSEEEKLNWLRQILEWQRD-MSDNR 416
>gi|218246275|ref|YP_002371646.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8801]
gi|257059322|ref|YP_003137210.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8802]
gi|218166753|gb|ACK65490.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8801]
gi|256589488|gb|ACV00375.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8802]
Length = 743
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 213/339 (62%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG+ V LVE
Sbjct: 55 RKSGEPYIAHPIAVAGLLRDLGGDKAMIAAGFLHDVVEDTDVTVEQIEENFGSEVRQLVE 114
Query: 62 GVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 115 GVTKLSKF-------NFSSKTEHQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLK 167
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A+ET EIF PLANRLGI +K +LE+L FK+L P+ + E+ S + E E
Sbjct: 168 PEKQERIARETKEIFAPLANRLGIWRFKWELEDLSFKYLEPEAYREIQSLVAEKRSDRET 227
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + E L Q L+ + + L GR K LY I+ KM +++ ++I+DI LR+IV+N
Sbjct: 228 RLETIKEMLRQRLQKIGVQVVELQGRPKHLYGIYHKMQRQQKGFNQIYDIAALRIIVKNN 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
EDCY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 288 EDCYRALAVVHDAFKPIPGRFKDYIGLPKPNRYQSLHTTVVGLTGRPLEVQIRTLEMHHI 347
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE G H+ + W R +L WQ
Sbjct: 348 AEYGIAAHWKYKETGGSDHTELSEEDEKFTWLRQLLEWQ 386
>gi|260892286|ref|YP_003238383.1| (p)ppGpp synthetase I SpoT/RelA [Ammonifex degensii KC4]
gi|260864427|gb|ACX51533.1| (p)ppGpp synthetase I, SpoT/RelA [Ammonifex degensii KC4]
Length = 710
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/337 (46%), Positives = 209/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P+L H V A +LA + ++ + AGLLHD ++D + + I FGA +A LV+
Sbjct: 39 RFSGEPFLSHPVAVARILAELELDTETIVAGLLHDVVEDTGTTLEEIEHEFGAEIAALVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+L ++E +A+ L MF+AMA D R VLIKLADRLHN+ TL LP
Sbjct: 99 GVTKLSRLQFRSQEEQ------QAENLRKMFVAMAKDVRVVLIKLADRLHNLRTLQYLPP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ AKETLEIF PLA+RLGI K +LE+L F++L P+++ EL++K+ + E
Sbjct: 153 EKQRAIAKETLEIFAPLAHRLGIYRLKWELEDLAFRYLEPERYRELAAKVAKTRAAREEY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
I L++ L++ I L GR K+LYSI+ KML+ EI+D G+R +VE
Sbjct: 213 TRELIAILQKRLEEAGIK-AELMGRPKNLYSIYQKMLRDGKEYSEIYDRTGIRALVETVR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VVH LW VPG+ KDYI PK N YQSLHT V G P+EVQIRT EMH A
Sbjct: 272 DCYAVLGVVHTLWKPVPGRFKDYIAMPKENMYQSLHTTVIGPQGEPVEVQIRTYEMHRTA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEG + + W R +L W E
Sbjct: 332 EYGIAAHWRYKEGQTRDKQLEAKFA-WLRELLEWVQE 367
>gi|443322004|ref|ZP_21051040.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
gi|442788304|gb|ELR98001.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
Length = 754
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/341 (47%), Positives = 212/341 (62%), Gaps = 18/341 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H V A LL +G +S ++AAG LHD ++D +S + I FG V LVE
Sbjct: 58 RKSGEPYIVHPVAVAGLLRDLGGDSAMIAAGFLHDVVEDTEVSLEEIESRFGEQVRQLVE 117
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ +SKT +A+ MFLAMA D R +++KLADRLHNM TL L
Sbjct: 118 GVTKLSKFE-------FSSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLQHLS 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
L K+Q A ET EIF PLANRLGI K +LE+L FK+L P+ + + + + E +
Sbjct: 171 LEKQQAIALETKEIFAPLANRLGIGRLKWELEDLSFKYLEPEAYRTMQNHIAEKRTDR-- 228
Query: 180 TSAIEKLEQALKDK----NISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
+ IEK+ Q LKD+ I + + GR K LY I+ KM ++ +EI+DI GLRLIV+
Sbjct: 229 EARIEKVTQLLKDRLQTIGIKIIEIQGRPKHLYGIYQKMCLQQKQFNEIYDIAGLRLIVD 288
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
N+E+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 289 NKEECYRALAIVHDTFRPIPGRFKDYIGLPKSNRYQSLHTSVVGLNGRPLEVQIRTLEMH 348
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQ 333
AE+G AAHW+YKE + V E W R +L WQ
Sbjct: 349 QVAEYGIAAHWKYKESGGSNQVQVSSGDEKFTWLRQLLEWQ 389
>gi|373468555|ref|ZP_09559802.1| putative GTP diphosphokinase [Lachnospiraceae bacterium oral taxon
082 str. F0431]
gi|371766018|gb|EHO54298.1| putative GTP diphosphokinase [Lachnospiraceae bacterium oral taxon
082 str. F0431]
Length = 762
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/338 (44%), Positives = 218/338 (64%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D ++YD + FG VA+LV+
Sbjct: 65 RKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAITYDELADMFGVDVANLVD 124
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QLS +N+ ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 125 GVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKP 179
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD + +LS KL + +
Sbjct: 180 EKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQF 239
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I+K Q L + F + GR K L+SI+ KM+ + T+D+I+D++ +R+IVE+
Sbjct: 240 VDDIIKKFSQHLSATGMKF-TINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVESVT 298
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL H+++ +PG+ KDYI PK N YQSLHT + + P EVQIRT EMH A
Sbjct: 299 DCYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLISDTGQPFEVQIRTVEMHKTA 358
Query: 299 EFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
EFG AAHW+YKE G + +M W R +L WQ
Sbjct: 359 EFGIAAHWKYKESGSGSVAKGAEDAKM-NWLRQILEWQ 395
>gi|78044718|ref|YP_361036.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996833|gb|ABB15732.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
Length = 716
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/337 (45%), Positives = 208/337 (61%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+ Y+ H + A +LA + + +AAGLLHD ++D + + I R FG VA+LV+
Sbjct: 39 RASGEDYITHPLAVAFILAGLQMDDETIAAGLLHDVVEDTAYTIEDIAREFGEEVANLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ +E + + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 99 GVTKLSRIEFKNKEEQ------QVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHNP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETLEIF PLA+RLGI K +LE+L F++L+PD + ++ K+ + E
Sbjct: 153 EKQKEIARETLEIFAPLAHRLGIYRIKWELEDLAFRYLDPDNYYDIVEKIAKTRAKREQY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I LE+ LK NI + GR K LYSI KM +++ E++D+ +R+IVE+
Sbjct: 213 IQQVISILEEKLKSYNIKAKI-EGRPKHLYSIFQKMREQQKDFSEVYDVMAVRVIVESVR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H +W VPG+ KDYI PK N YQSLHT V G PLE+QIRT EMH A
Sbjct: 272 DCYTVLGIIHTMWIPVPGRFKDYIAMPKSNMYQSLHTTVIGPFGEPLEIQIRTFEMHRTA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEG F + + W R +L WQ E
Sbjct: 332 EYGIAAHWRYKEGGKGDKKFD-EKLSWLRQILEWQRE 367
>gi|451336886|ref|ZP_21907438.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Amycolatopsis azurea
DSM 43854]
gi|449420535|gb|EMD26011.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Amycolatopsis azurea
DSM 43854]
Length = 776
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 215/340 (63%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG V +LV+
Sbjct: 90 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLESLKADFGEKVGELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 150 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 201
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 202 EKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDTY 261
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ S I +L L+ I+ V GR K YSIH KM+ + +D+IHD+ G+R++VE+
Sbjct: 262 LRSVITELTGNLEGSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEDVR 320
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW VPG+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 321 DCYAAMGVVHALWQPVPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTYEMHRTA 380
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H+ + + E W R +L WQ EA
Sbjct: 381 EYGIAAHWRYKETKGTHNGNAMDVDEMAWMRQLLDWQREA 420
>gi|291297171|ref|YP_003508569.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus ruber DSM 1279]
gi|290472130|gb|ADD29549.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus ruber DSM 1279]
Length = 750
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/360 (43%), Positives = 224/360 (62%), Gaps = 24/360 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H V A +LA +G + + AGLLHDT++D + + I FGA V +VE
Sbjct: 58 RKSGEPYIVHPVAVAQILAELGLDVETLLAGLLHDTIEDTEVRPEDIEERFGAAVRKIVE 117
Query: 62 GVSKLSQLSKLAR--ENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
G +K+S+L KLA + + ++ A+ L MF+AMA D R +++KLADRLHN+ TL+ +
Sbjct: 118 GETKVSKLYKLAHAAQEDKHAEGKHAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFM 177
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDE 176
P K+QR A+ETLEI+ PLA+RLGI K++LE+L F++L+P+ + L +L E
Sbjct: 178 PPHKQQRIARETLEIYAPLAHRLGIGQVKLELEDLSFRYLDPENYQALERRLKSHRAERE 237
Query: 177 AMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 231
A V +A EKLEQAL ++I + GR K L+SI KM ++ T+++I+D+ LR
Sbjct: 238 AAVQAAKEKLEQALARDFILKQSIKKFEVTGRTKHLFSIWKKMEREGKTIEQIYDLLALR 297
Query: 232 LIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 278
+I++ ++ CY L +VH LW +PG++KDYI PK NGYQSLHT V
Sbjct: 298 VILDPRQGPDPEENSLREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVI 357
Query: 279 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
+PLEVQIRT+EMH AEFG AAHW YKEG + + V W + + WQ E S
Sbjct: 358 AVNGLPLEVQIRTREMHRVAEFGVAAHWLYKEG-VTDPEDLRRRVGWLKSIQDWQQEYSS 416
>gi|452946137|gb|EME51637.1| GTP pyrophosphokinase [Amycolatopsis decaplanina DSM 44594]
Length = 776
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 215/340 (63%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG V +LV+
Sbjct: 90 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLESLKADFGEKVGELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 150 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 201
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 202 EKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDTY 261
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ S I +L L+ I+ V GR K YSIH KM+ + +D+IHD+ G+R++VE+
Sbjct: 262 LRSVITELTGNLEGSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEDVR 320
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW VPG+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 321 DCYAAMGVVHALWQPVPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTYEMHRTA 380
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H+ + + E W R +L WQ EA
Sbjct: 381 EYGIAAHWRYKETKGTHNGNAMDVDEMAWMRQLLDWQREA 420
>gi|113953676|ref|YP_731890.1| RelA/SpoT family protein [Synechococcus sp. CC9311]
gi|113881027|gb|ABI45985.1| RelA/SpoT family protein [Synechococcus sp. CC9311]
Length = 778
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 160/345 (46%), Positives = 210/345 (60%), Gaps = 14/345 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ D I FG V +LV
Sbjct: 84 FRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPDQIESHFGPEVRELV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM T+ AL
Sbjct: 144 EGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTIGALK 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD----QHTELSSKLVECFD 175
K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+S+K E D
Sbjct: 198 EEKQQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVSTKRSERED 257
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
VT ++ L L + + GR K LY I KM +++ EI+D+ LR++
Sbjct: 258 RLSVT--VQLLCDRLAAVGLDSCEVSGRPKHLYGIWTKMQRQQKEFHEIYDVAALRILTP 315
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT +MH
Sbjct: 316 NVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTWDMH 374
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
+EFG AAHW+YKEG + + W R ++ WQ E + D
Sbjct: 375 QVSEFGIAAHWKYKEGGSPATGGDTERFNWLRQLVDWQQEGAADD 419
>gi|283795474|ref|ZP_06344627.1| GTP diphosphokinase [Clostridium sp. M62/1]
gi|291077138|gb|EFE14502.1| RelA/SpoT family protein [Clostridium sp. M62/1]
Length = 761
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/405 (38%), Positives = 240/405 (59%), Gaps = 34/405 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AG+LHD ++D ++ D + R FGA VA LV+
Sbjct: 62 RKSGEPYIIHPLCVAIILADLELDKETIVAGILHDVVEDTVMTTDGLAREFGAEVALLVD 121
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+ +S + ++A+ L MFLAMA D R +L+KLADRLHNM TL +
Sbjct: 122 GVTKLTNISW-----DKDKVEMQAENLRKMFLAMAKDIRVILVKLADRLHNMRTLQYMKP 176
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A+ET++I+ P+A+RLGIS K +L++L K+L P+ + ELS K+ D EA
Sbjct: 177 EKQREKARETMDIYAPIADRLGISRIKTELDDLALKYLEPEVYYELSEKISLRKDAREAF 236
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +++++ + D I V GR K +SI+ KM+K+ T+D+I+D++ +R+IV+ +
Sbjct: 237 VKGIVDEVKSHMDDAGIECKV-DGRVKHFFSIYKKMVKQNKTLDQIYDLFAVRIIVDTVK 295
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+L+ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 296 DCYAALGVIHELYKPIPGRFKDYIAMPKINNYQSLHTTLIGSSGQPFEIQIRTYEMHRVA 355
Query: 299 EFGFAAHWRYKEGDCQHSSF--VLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF 356
E+G AAHW+YKE ++ + + W R +L WQ + MS ++ + DS+K
Sbjct: 356 EYGIAAHWKYKESGSTKAAMDSAEEKLSWLRQILEWQKD-MSDNKEFL---DSLKSDLDL 411
Query: 357 PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
S D F + P V+ P+ ST +D
Sbjct: 412 FS---DSVFCFTPSG----------------DVKNLPSGSTPIDF 437
>gi|257055543|ref|YP_003133375.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora viridis
DSM 43017]
gi|256585415|gb|ACU96548.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora viridis
DSM 43017]
Length = 812
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 216/340 (63%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 126 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQLTEDFGEKVAQLVD 185
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 186 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 237
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R AKETLE+ PLA+RLG+ST K +LE+L F L P ++ E+ + + +
Sbjct: 238 EKQARKAKETLEVLAPLAHRLGMSTVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDTY 297
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L + L++ I+ V GR K YSIH KM+ + +D+IHD+ G+R++VE+
Sbjct: 298 LRWVIGELTRQLEESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEDVR 356
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDYI +P++ YQSLHT V G PLEVQIRT EMH A
Sbjct: 357 DCYAAMGVVHALWQPMPGRFKDYIAQPRYGVYQSLHTTVIGPDGKPLEVQIRTHEMHRTA 416
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H +++ E W R +L WQ EA
Sbjct: 417 EYGIAAHWRYKETKGTHKGNAVEIDEMAWMRQLLDWQREA 456
>gi|295091158|emb|CBK77265.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium cf.
saccharolyticum K10]
Length = 761
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 157/405 (38%), Positives = 240/405 (59%), Gaps = 34/405 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AG+LHD ++D ++ D + R FGA VA LV+
Sbjct: 62 RKSGEPYIIHPLCVAIILADLELDKETIVAGILHDVVEDTVMTTDGLAREFGAEVALLVD 121
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+ +S + ++A+ L MFLAMA D R +L+KLADRLHNM TL +
Sbjct: 122 GVTKLTNISW-----DKDKVEMQAENLRKMFLAMAKDIRVILVKLADRLHNMRTLQYMKP 176
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A+ET++I+ P+A+RLGIS K +L++L K+L P+ + ELS K+ D EA
Sbjct: 177 EKQREKARETMDIYAPIADRLGISRIKTELDDLALKYLEPEVYYELSEKISLRKDAREAF 236
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +++++ + D I V GR K +SI+ KM+K+ T+D+I+D++ +R+IV+ +
Sbjct: 237 VKGIVDEVKSHMDDAGIECKV-DGRVKHFFSIYKKMVKQNKTLDQIYDLFAVRIIVDTVK 295
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+L+ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 296 DCYAALGVIHELYKPIPGRFKDYIAMPKINNYQSLHTTLIGSSGQPFEIQIRTYEMHRVA 355
Query: 299 EFGFAAHWRYKEGDCQHSSF--VLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF 356
E+G AAHW+YKE ++ + + W R +L WQ + MS ++ + DS+K
Sbjct: 356 EYGIAAHWKYKESGSTKAAMDSAEEKLSWLRQILEWQKD-MSDNKEFL---DSLKSDLDL 411
Query: 357 PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
S D F + P V+ P+ ST +D
Sbjct: 412 FS---DSVFCFTPSG----------------DVKNLPSGSTPIDF 437
>gi|153955745|ref|YP_001396510.1| RelA protein [Clostridium kluyveri DSM 555]
gi|146348603|gb|EDK35139.1| RelA [Clostridium kluyveri DSM 555]
Length = 726
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 215/340 (63%), Gaps = 15/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A +LA +G +++ + AGLLHD ++D S + + R F VA+LVE
Sbjct: 37 RESGEPYIMHPVEVACILAEMGMDTSTIVAGLLHDIVEDTEFSREDVSREFSVEVANLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM+D R +LIKLADRLHNM TL LP+
Sbjct: 97 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMSDDIRVILIKLADRLHNMRTLKFLPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH----TELSSKLVECFDE 176
K++ AKET +I+ PLA RLG+S K +LE+L F+++N +++ ++S K VE E
Sbjct: 151 KKQKEKAKETFDIYAPLAYRLGMSKIKWELEDLAFRYINQNEYYFIVRKISEKRVE--RE 208
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I+KL + ++ I+ + GR K YSI+ KM+KK T+D+I D+ +R++V
Sbjct: 209 KYIEQIIKKLRENMQKAGIN-TDIEGRPKHFYSIYRKMVKKNKTIDQIFDLTAVRILVST 267
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL + H ++ VPG+ KDYI PK N YQSLHT V G P E+QIRT EMH
Sbjct: 268 MKDCYAALGIAHTIYKPVPGRFKDYIAMPKANMYQSLHTTVIGPQGKPFEIQIRTFEMHK 327
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YKEG + + + + W R +L WQ E
Sbjct: 328 TAEYGIAAHWKYKEG-ADTAEDIDKKLTWLREMLEWQRET 366
>gi|374313164|ref|YP_005059594.1| (p)ppGpp synthetase I SpoT/RelA [Granulicella mallensis MP5ACTX8]
gi|358755174|gb|AEU38564.1| (p)ppGpp synthetase I, SpoT/RelA [Granulicella mallensis MP5ACTX8]
Length = 832
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 220/337 (65%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY++H +E A +LA + +ST +AAGLLHD ++D ++ + I + FG VA +VE
Sbjct: 133 RASGEPYVIHPLEVAQVLAELKMDSTAIAAGLLHDAVEDTDVTPEEIAKRFGEQVAHIVE 192
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ RE++ +A+ + M LAM D R V+IKLADRLHNM TL+ L
Sbjct: 193 GVTKLDKIKFANREDH------QAENIRKMLLAMVTDVRVVIIKLADRLHNMRTLEHLKP 246
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K+QR A+ETLEI+ PLA+RLG+ + +LE+L F++ +P Q+T+L++++ + EA
Sbjct: 247 EKQQRIARETLEIYAPLAHRLGMGKLRGELEDLAFRYTDPFQYTQLTTEVDSLRGEGEAF 306
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + LE L++ NI+ V R K LYSI K+ ++ +D+++D++ +R+I + E+
Sbjct: 307 LHRIVSTLEAKLREANINARVES-RIKRLYSIQQKLTAHQIPVDQVYDLFAIRVITQTEQ 365
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL ++H W VPG+ KD+I P+ N YQSLHT + EG EVQIRT++MH A
Sbjct: 366 DCYAALGLLHSTWRPVPGRFKDFIAMPRPNMYQSLHTTLIAEGAHQFEVQIRTEDMHQVA 425
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E G AAHW+YK D S+ Q + W R ++ WQ E
Sbjct: 426 EEGIAAHWKYKASD-NVSAADEQRLAWVRQLMEWQRE 461
>gi|402837012|ref|ZP_10885543.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
gi|402270028|gb|EJU19297.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
Length = 732
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 215/341 (63%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + + +LA G ++ + AGL+HD ++D + + + FG +A LV
Sbjct: 44 LRKSGEPYIIHPIAVSFILATFGMDTETIIAGLMHDVVEDTPYTREQLVEDFGEEIALLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL + ++E ++A+ MFLAM+ D R ++IKLADRLHNM TL+ +P
Sbjct: 104 DGVTKLGNIKYDSKEE------LQAENFRKMFLAMSKDIRVLIIKLADRLHNMRTLEYMP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
KR+ A ETLEI+ PLA RLGI + K +LE+L +L+P ++ ELS+K+ + EA
Sbjct: 158 TTKREEKALETLEIYAPLAGRLGIYSIKFELEDLALMYLHPTEYRELSNKVNKRRQSREA 217
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V I +++ L NI + V GR K LYSI+ KM+ +K +DEI D+ +R+IV+N
Sbjct: 218 VVQQLITEIKAGLDKANIEYEV-TGRSKHLYSIYKKMVIQKKQLDEIFDLTAIRVIVDNI 276
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH W +PG+ KDYI PK N YQS+HT V + P E+QIRTKEMH
Sbjct: 277 KDCYATLGLVHTRWTPIPGRFKDYIAMPKPNMYQSIHTTVLDDEGNPFEIQIRTKEMHRI 336
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YKEG D + + ++ W R L WQ E
Sbjct: 337 AEYGIAAHWKYKEGKSDSKQNEDEKKLA-WLRQALEWQKET 376
>gi|33860751|ref|NP_892312.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633693|emb|CAE18650.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 769
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/345 (45%), Positives = 214/345 (62%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASG+PY++H + A LL IGA+S+VVAAGLLHD ++D ++ I FG V LV
Sbjct: 78 LRASGEPYIIHPLAVADLLKEIGASSSVVAAGLLHDVVEDTGIALSEIEVNFGLEVKVLV 137
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + NN +A+ L MFLAMA D R VL+KLADRLHNM T+ L
Sbjct: 138 EGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVVLVKLADRLHNMRTIQWLN 191
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EA 177
+++R A+ET EI+ PLANRLGI+ +K +LE+L FK L P+++ L ++ V+ D E
Sbjct: 192 EERKERIARETREIYAPLANRLGINRFKWELEDLAFKFLEPEEYKNLKDQIAVKRSDREK 251
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +++ L + + GR K LY I KM +++ EI+D+ LR+IV N
Sbjct: 252 RLNVTLNLMKENLVSSGLVNFEITGRPKHLYGIWSKMERQQKQFGEIYDVAALRIIVSNT 311
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT MH
Sbjct: 312 DSCYKALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTSVIGRHR-PIEVQIRTSSMHQI 370
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
AEFG AAHW+YKEG SS + W R ++ WQ E KD +
Sbjct: 371 AEFGIAAHWQYKEGGSPASSNA-ERFNWLRQLVEWQQEGNEKDHN 414
>gi|302391503|ref|YP_003827323.1| (p)ppGpp synthetase I SpoT/RelA [Acetohalobium arabaticum DSM 5501]
gi|302203580|gb|ADL12258.1| (p)ppGpp synthetase I, SpoT/RelA [Acetohalobium arabaticum DSM
5501]
Length = 734
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 218/335 (65%), Gaps = 11/335 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H + A+++A + + + LLHD ++D +S+ + FG + LV
Sbjct: 51 RVSGEPFVEHPLGVALIMAELELDIISITGALLHDVVEDTEVSFAQLRNEFGEEITLLVN 110
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+++ +RE +A+ L MFLAM+ D R +LIKL+DRLHNM TL+ L
Sbjct: 111 GVTKLSKIAFKSREEQ------QAESLRKMFLAMSKDIRVILIKLSDRLHNMRTLEYLSQ 164
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++R A+ET+EI+ PLA+RLGIST K +LE+L FKHL P+++ ELS+K+ + DE
Sbjct: 165 QKQERIARETIEIYAPLAHRLGISTLKWELEDLSFKHLEPNKYYELSNKVSKNRDEREEY 224
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I K+E+ L + I + GR K LYSI+ KM +K + EI+D+ LR+IV + +
Sbjct: 225 IDRCISKVEKRLNLEGIDAHIY-GRPKHLYSIYQKMKRKNKELSEIYDLVALRVIVNDVQ 283
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CYQ L +H++W +PG++KDYI PK N YQSLHT V G PLE+QIRT +MH A
Sbjct: 284 ECYQVLGNIHEIWNPIPGRIKDYIAMPKSNMYQSLHTTVIGPKGEPLEIQIRTWDMHRTA 343
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG +++ + + W R +L WQ
Sbjct: 344 EYGVAAHWRYKEG-KKNNEKAAKKISWLRQLLEWQ 377
>gi|219856114|ref|YP_002473236.1| hypothetical protein CKR_2771 [Clostridium kluyveri NBRC 12016]
gi|219569838|dbj|BAH07822.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 733
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 215/340 (63%), Gaps = 15/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A +LA +G +++ + AGLLHD ++D S + + R F VA+LVE
Sbjct: 44 RESGEPYIMHPVEVACILAEMGMDTSTIVAGLLHDIVEDTEFSREDVSREFSVEVANLVE 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM+D R +LIKLADRLHNM TL LP+
Sbjct: 104 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMSDDIRVILIKLADRLHNMRTLKFLPV 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH----TELSSKLVECFDE 176
K++ AKET +I+ PLA RLG+S K +LE+L F+++N +++ ++S K VE E
Sbjct: 158 KKQKEKAKETFDIYAPLAYRLGMSKIKWELEDLAFRYINQNEYYFIVRKISEKRVE--RE 215
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I+KL + ++ I+ + GR K YSI+ KM+KK T+D+I D+ +R++V
Sbjct: 216 KYIEQIIKKLRENMQKAGIN-TDIEGRPKHFYSIYRKMVKKNKTIDQIFDLTAVRILVST 274
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL + H ++ VPG+ KDYI PK N YQSLHT V G P E+QIRT EMH
Sbjct: 275 MKDCYAALGIAHTIYKPVPGRFKDYIAMPKANMYQSLHTTVIGPQGKPFEIQIRTFEMHK 334
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YKEG + + + + W R +L WQ E
Sbjct: 335 TAEYGIAAHWKYKEG-ADTAEDIDKKLTWLREMLEWQRET 373
>gi|307155133|ref|YP_003890517.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7822]
gi|306985361|gb|ADN17242.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7822]
Length = 750
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/338 (44%), Positives = 212/338 (62%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G +ST++AAG LHD ++D ++ + I + FG V LVE
Sbjct: 59 RKSGEPYIAHPIAVAGLLRDLGGDSTMIAAGFLHDVVEDTEVTLEDIEQRFGDEVRQLVE 118
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 119 GVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLA 171
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++ A ET EIF PLANRLGI +K +LE+LCFK+L P+ + E+ + + E E
Sbjct: 172 TEKQRSIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPEAYREIQALVAEKRIDRET 231
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E + + L ++ L + GR K LY I+ KM +++ EI+DI LR+IVE +
Sbjct: 232 RIEQITETIREGLHQIGVNVLEIQGRPKHLYGIYHKMQRQRKEFHEIYDIAALRIIVETK 291
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+AL +VH ++ +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 292 DECYRALAIVHDVFKPIPGRFKDYIGLPKSNRYQSLHTTVVGFTGRPLEVQIRTLEMHHI 351
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE + + + W R ++ WQ
Sbjct: 352 AEYGIAAHWKYKESGGSNYNLTSEDEKFTWLRQLIEWQ 389
>gi|443325885|ref|ZP_21054559.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
gi|442794512|gb|ELS03925.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
Length = 750
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/337 (45%), Positives = 208/337 (61%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G + +AAG LHD ++D ++ + I FG V LVE
Sbjct: 55 RKSGEPYIAHPVAVAGLLRDLGGDCVTIAAGFLHDIVEDTDITPEQIEEMFGFEVRCLVE 114
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+ N +++K +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 115 GVTKLSKF------NFSSTKERQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEHLKP 168
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++R A ET EIF PLANRLGI +K +LE+LCFK+L P+ + E+ S + E EA
Sbjct: 169 EKQRRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPEAYREIQSLISERRSDREAR 228
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ L +++ I L L GR K LY I+ KM +++ +EI+DI +R+IVE E
Sbjct: 229 IEKVLDTLRSQMENLGIKILELKGRPKHLYGIYQKMQRQQKKFEEIYDIAAIRIIVEANE 288
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY++L VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 289 QCYRSLAVVHDAFKPIPGRFKDYIGLPKPNRYQSLHTTVVGSNGRPLEVQIRTLEMHHIA 348
Query: 299 EFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
E+G AAHW+YKE + + W R +L WQ
Sbjct: 349 EYGIAAHWKYKETGSSEAPVNSDDEKFTWLRQLLEWQ 385
>gi|333979510|ref|YP_004517455.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822991|gb|AEG15654.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum kuznetsovii DSM
6115]
Length = 724
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/337 (45%), Positives = 212/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H V A +LA + + + AGLLHD ++D ++ + I FG VA LV+
Sbjct: 46 RISGEPFITHPVAVAHILANLQMDLQTLVAGLLHDVVEDTGVTLEEIKTAFGDEVALLVD 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+L ++E + +A+ L MFLAMA D R +LIKLADRLHN+ TL
Sbjct: 106 GVTKLSRLEYRSKEEH------QAENLRKMFLAMAQDIRVILIKLADRLHNLRTLKYHTE 159
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A+ETLEI+ PLA+RLGI K +LE+L F++L P+++ EL+ ++ E
Sbjct: 160 TKQKEIARETLEIYAPLAHRLGIYHLKWELEDLSFRYLEPEKYYELAERVSRTRRKREEY 219
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +AI+ L + L + I F + GR K LYSI+ KM K++ + EI+D+ +R+IVE+
Sbjct: 220 IRTAIQILRRKLAEAGI-FADIQGRPKHLYSIYTKMEKQQKDLSEIYDVMAVRVIVESIR 278
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH LW +PG+ KDYI PK N YQSLHT V G PLE+QIRT+EMH A
Sbjct: 279 DCYAVLGTVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVVGPQGEPLEIQIRTREMHRTA 338
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEG Q + W R +L WQ E
Sbjct: 339 EYGIAAHWRYKEGGKTDRDLD-QKLAWLRQILEWQRE 374
>gi|300856534|ref|YP_003781518.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
gi|300436649|gb|ADK16416.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
Length = 725
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 212/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H VE A +L +G +++ + AGLLHD ++D SY+ I R F VA+LVE
Sbjct: 37 RESGEPYISHPVEVAYILVEMGLDTSTIVAGLLHDVIEDTQFSYEDIKREFSVEVANLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAMAD R +LIKLADRLHNM TL +P+
Sbjct: 97 GVTKLGKIECKTKEEQ------QADNVRKMLLAMADDIRVILIKLADRLHNMRTLKYMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ AKET +I+ PLA+RLG+S K +LE+L F+++N +++ + K+ E E
Sbjct: 151 KKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINQNEYYFIVRKIAEKRVEREKY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L+ LK I + GR K YSI+ KM+KK T+D+I D+ +R++V +
Sbjct: 211 IDEIISQLKDNLKKSGIDSDI-EGRPKHFYSIYRKMVKKNKTIDQIFDLTAVRILVNTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G P E+QIRT EMH A
Sbjct: 270 DCYAALGIAHTIYKPMPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPFEIQIRTFEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG ++ + + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEG-VDTANDIDKKLTWLREILEWQRET 366
>gi|385676940|ref|ZP_10050868.1| GTP pyrophosphokinase [Amycolatopsis sp. ATCC 39116]
Length = 776
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 214/340 (62%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 90 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQLTADFGDKVAQLVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 150 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 201
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 202 EKQVRKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDIY 261
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I++L AL I+ V GR K YSIH KM+ + +D+IHD+ G+R++VE+
Sbjct: 262 LRKVIDELTGALGGSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEDVR 320
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 321 DCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTYEMHHTA 380
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 381 EYGIAAHWRYKETKGTHHGTAVDIDEMAWMRQLLDWQREA 420
>gi|419718385|ref|ZP_14245704.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum F0468]
gi|383305419|gb|EIC96785.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum F0468]
Length = 762
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 217/337 (64%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H + A++LA + + +AAGLLHD ++D ++Y+ + FG VA+LV+
Sbjct: 65 RKSGEPYLIHPICVAIILAELELDKETIAAGLLHDVIEDTVITYNELADMFGIDVANLVD 124
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QLS +N+ ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 125 GVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKP 179
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD + +LS KL + +
Sbjct: 180 EKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQF 239
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I+K Q L + + + GR K L+SI+ KM+ + T+D+I+D++ +R+IVE+
Sbjct: 240 VDEIIKKFSQHLSATGMKY-TINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVESVT 298
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL H+++ +PG+ KDYI PK N YQSLHT + + P EVQIRT EMH A
Sbjct: 299 DCYLALGTAHEIYKPIPGRFKDYIAMPKTNMYQSLHTTLISDTGQPFEVQIRTYEMHKTA 358
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQ 333
EFG AAHW+YKE + + + W R +L WQ
Sbjct: 359 EFGIAAHWKYKESGSGSEAKGAEDAKMNWLRQILEWQ 395
>gi|385799597|ref|YP_005836001.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium praevalens DSM 2228]
gi|309388961|gb|ADO76841.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium praevalens DSM
2228]
Length = 715
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 215/335 (64%), Gaps = 11/335 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H + +++LA + + + + LLHD ++D +S I + FGA VA +V+
Sbjct: 38 RVSGEPFVEHPLGVSIILAELELDIVSIVSSLLHDVVEDTSVSSQEIEKEFGAEVAHIVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+++ + + +A+ L MF+AMA D R VLIKLADRLHNM TL+ L
Sbjct: 98 GVTKLTRMQFKTKADQ------QAESLRKMFVAMAEDIRVVLIKLADRLHNMRTLNYLKK 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
KR+ ++ET+EI+ PLA+RLG+S K +LE+L F++L PD + E+S K+ E
Sbjct: 152 AKRKEKSRETIEIYAPLAHRLGMSKIKWELEDLSFRYLKPDMYYEISHKVQANRKQREKD 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AIEKL L+ +I + GR K LYSI+ KM +K++ DEI+D+ +R++VEN +
Sbjct: 212 IKEAIEKLNLTLESHSIEADIY-GRPKHLYSIYNKMKRKEVEFDEIYDLTAVRVLVENVK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L V+H++W +PG+ KDYI PK N YQSLHT V PLEVQIRT EMH A
Sbjct: 271 ECYEVLGVLHEIWKPMPGRFKDYIAMPKSNMYQSLHTTVIAPNGDPLEVQIRTYEMHKTA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG F + + W R +L WQ
Sbjct: 331 EYGIAAHWRYKEGKVGDEKFE-EKLSWLRRLLEWQ 364
>gi|300787167|ref|YP_003767458.1| GTP pyrophosphokinase [Amycolatopsis mediterranei U32]
gi|384150512|ref|YP_005533328.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|399539049|ref|YP_006551712.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|299796681|gb|ADJ47056.1| GTP pyrophosphokinase [Amycolatopsis mediterranei U32]
gi|340528666|gb|AEK43871.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|398319819|gb|AFO78766.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
Length = 784
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 210/340 (61%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FG VA+LV+
Sbjct: 98 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYAVESLKADFGDKVAELVD 157
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 158 GVTKLDKVQ--------LGSSAEAETIRKMVIAMAKDPRVLVIKLADRLHNMRTMRFLPP 209
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 210 EKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDIY 269
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ S I L L I+ V GR K YSIH KM+ + +D+IHD+ G+R++VE+
Sbjct: 270 LRSVITDLTSNLVSSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEDVR 328
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW VPG+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 329 DCYAAMGVVHALWQPVPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTYEMHRTA 388
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H+ + + E W R +L WQ EA
Sbjct: 389 EYGIAAHWRYKETKGTHTGNAVDVDEMAWMRQLLDWQREA 428
>gi|338814984|ref|ZP_08626943.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
gi|337273028|gb|EGO61706.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
Length = 736
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 211/336 (62%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H V A +LA + ++T ++A +LHD ++D F++ + I + FG VA LV
Sbjct: 45 LRVSGEEYIIHPVGVAKILADLQIDATTISAAILHDVVEDTFITLEDIEKKFGKEVAMLV 104
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ ++E + + M LAMA D R VLIKLADRLHNM TL +P
Sbjct: 105 DGVTKLSRIEYKSKEEQ------QLENYRKMLLAMAKDLRVVLIKLADRLHNMRTLKFMP 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA-- 177
K++R A+ETLEI+ PLA+RLG+S K ++E+L F++L P+++ EL K+ + E
Sbjct: 159 EVKQKRIARETLEIYAPLAHRLGMSNIKWEMEDLSFRYLEPERYYELVEKVKQKRQERQD 218
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ AI L L D I + GR K YSI+ KM K ++EI+D+ +R++VE
Sbjct: 219 IIDEAIRILSDRLADMGIKAEI-QGRPKHFYSIYKKMQKDHKDINEIYDLSAVRVLVETV 277
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL +VH LW +P + KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 278 KDCYGALGIVHTLWKPIPLRFKDYIAMPKSNMYQSLHTTVIGTRGQPLEIQIRTWEMHRT 337
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG Q + W R +L WQ
Sbjct: 338 SEYGIAAHWRYKEGTKNSGKDFDQKLSWLRQLLEWQ 373
>gi|116074036|ref|ZP_01471298.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9916]
gi|116069341|gb|EAU75093.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9916]
Length = 778
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 206/343 (60%), Gaps = 10/343 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA++ V+AAG LHD ++D L+ D + FG V LV
Sbjct: 84 FRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTDLTADQLEEHFGPEVRALV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL +L
Sbjct: 144 EGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTLGSLK 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K++R A+ET EI+ PLANRLGI +K +LE+L FK L P+ E++ ++ E
Sbjct: 198 REKQERIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREITEEVATKRSEREE 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L L + + GR K LY I KM +++ EI+D+ +R+I N
Sbjct: 258 RLGVTLKLLGDRLAAVGLESCEVNGRPKHLYGIWSKMQRQQKAFHEIYDVAAVRIITPNL 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 318 ETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTAEMHQV 376
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
+EFG AAHW+YKEG + + W R ++ WQ E S D
Sbjct: 377 SEFGIAAHWKYKEGGSPAAGGDTERFNWLRQLVDWQQEGGSDD 419
>gi|336424063|ref|ZP_08604110.1| hypothetical protein HMPREF0994_00116 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336012840|gb|EGN42733.1| hypothetical protein HMPREF0994_00116 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 809
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 219/343 (63%), Gaps = 11/343 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A++LA + + + AGLLHD ++D ++ I + FG VA LV
Sbjct: 101 VRKSGEPYIIHPLCVAIILADLELDKETIEAGLLHDVVEDTIMTEAEIEKEFGPDVALLV 160
Query: 61 EGVSKLSQLSKLARENNTASKT-----VEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 114
+GV+KL Q+ + + N +KT ++A+ L MFLAMA D R ++IKLADRLHNM T
Sbjct: 161 DGVTKLQQIDFPSDKGNGENKTADQQEMQAENLRKMFLAMAKDIRVIMIKLADRLHNMRT 220
Query: 115 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--E 172
L P K+Q+ A+ET+EI+ P+A RLGIS KV+L++L K+L P+ + +L K+
Sbjct: 221 LKYQPPAKQQKIARETMEIYAPIAQRLGISKIKVELDDLSLKYLEPEVYYDLVDKIAVRR 280
Query: 173 CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
E + ++++ + +K+ I + GR K +SI+ KM + T+D+I+D++ +R+
Sbjct: 281 SEREEYIQQIVDEVSEHMKNAGIKSQI-DGRVKHFFSIYKKMKNQSKTLDQIYDLFAVRI 339
Query: 233 IVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTK 292
IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT V G P E+QIRT
Sbjct: 340 IVDSVKDCYAALGVIHEMYKPIPGRFKDYIAMPKANMYQSLHTTVIGSSGQPFEIQIRTM 399
Query: 293 EMHLQAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQ 333
EMH AEFG AAHW+YKE + ++ + + W R +L WQ
Sbjct: 400 EMHKAAEFGIAAHWKYKEASDGKKVAAQEEEKLAWLRQILEWQ 442
>gi|269792823|ref|YP_003317727.1| (p)ppGpp synthetase I SpoT/RelA [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100458|gb|ACZ19445.1| (p)ppGpp synthetase I, SpoT/RelA [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 756
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/338 (45%), Positives = 211/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +LA +G + ++A LLHD L+D + + + FG GV +V+
Sbjct: 75 RHSGEPYIVHSISVAAILADMGLDVETLSAALLHDVLEDTEVGKEEMLSRFGEGVLTMVD 134
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L+ + E+ +A+ L MFL MA D R VLIKLADRLHNM TL A
Sbjct: 135 GVTKLGKLAFKSMED------YQAENLRKMFLVMAKDIRVVLIKLADRLHNMRTLQAHRR 188
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 178
K+ AKETLEI+ PLA+RLGI K +LE+LCFK L PD + E+ ++ + EA+
Sbjct: 189 DKQITIAKETLEIYAPLAHRLGIYNVKRELEDLCFKILEPDIYYEIRRRVRKKLPEREAI 248
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A++ L+ LK++ I L GR K YSI+ KM +K L++D+++D+ LR+IV
Sbjct: 249 IKQALDVLQGKLKEEGIEAY-LSGRPKHFYSIYEKMRRKNLSLDQLYDLLALRVIVGTVA 307
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CYQ L +VH +W +PG+ DYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 308 ECYQVLGLVHTIWKPIPGQFDDYIANPKSNMYQSLHTTVLGPSGEPLEVQIRTWEMHWLA 367
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW YKEG + + Q + W R VL Q E
Sbjct: 368 EYGVAAHWHYKEGK-RRVDQIDQKLSWIRQVLETQQEG 404
>gi|148240678|ref|YP_001226065.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. WH 7803]
gi|147849217|emb|CAK24768.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. WH 7803]
Length = 797
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 207/343 (60%), Gaps = 10/343 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ + + FG V +LV
Sbjct: 104 FRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPEQLESHFGPEVRELV 163
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 164 EGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTLGALR 217
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++ E
Sbjct: 218 EEKRQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVATKRSEREE 277
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L L + + GR K LY I KM +++ EI+D+ LR++ +
Sbjct: 278 RLGVTVQLLSDRLAAAGLENCEVNGRPKHLYGIWTKMQRQQKAFHEIYDVAALRILTPSV 337
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 338 EACYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTLEMHQV 396
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
+EFG AAHW+YKEG + + W R ++ WQ E S D
Sbjct: 397 SEFGIAAHWKYKEGGSPAAGGDTERFNWLRQLVDWQQEGGSDD 439
>gi|218441725|ref|YP_002380054.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7424]
gi|218174453|gb|ACK73186.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7424]
Length = 749
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/338 (45%), Positives = 210/338 (62%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G +ST++AAG LHD ++D ++ + I FG V LVE
Sbjct: 59 RKSGEPYIAHPVAVAGLLRDLGGDSTMIAAGFLHDVVEDTEVTLEEIEERFGLEVRQLVE 118
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 119 GVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLA 171
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A ET EIF PLANRLGI +K +LE+LCFK+L P+ + E+ + + E E
Sbjct: 172 PEKQCRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPEAYREIQTLVAEKRVDRET 231
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E L + L + L + GR K LY I+ KM ++ EI+DI LR++VE +
Sbjct: 232 RIDKISETLRERLYQIGVKVLEIQGRPKHLYGIYDKMQRQHKEFHEIYDIAALRILVETK 291
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL +VH ++ +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 292 EECYRALAIVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTVVGLNCRPLEVQIRTLEMHHI 351
Query: 298 AEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHW+YKE G + + + W R ++ WQ
Sbjct: 352 AEYGIAAHWKYKETGGSTYNITSEDEKFTWLRQLIEWQ 389
>gi|78213963|ref|YP_382742.1| metal dependent phosphohydrolase [Synechococcus sp. CC9605]
gi|78198422|gb|ABB36187.1| metal dependent phosphohydrolase [Synechococcus sp. CC9605]
Length = 758
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/344 (46%), Positives = 208/344 (60%), Gaps = 11/344 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA++ V+AAG LHD ++D ++ D I FG+ V +LV
Sbjct: 65 FRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTDVTPDQIELHFGSEVRELV 124
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + R +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 125 EGVTKLGGIHFNDR------TEAQAENLRRMFLAMASDIRVVLVKLADRLHNMRTLGALK 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++ E
Sbjct: 179 EEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQEEVATKRSEREQ 238
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + L + L+ + + GR K L+ I KM +++ EI+D+ LR++ N
Sbjct: 239 RLGVTVGLLNERLERAGLDHCEVSGRPKHLFGIWSKMQRQQKEFHEIYDVAALRILTPNV 298
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 299 ESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTLEMHHV 357
Query: 298 AEFGFAAHWRYKEGDCQHSSFV-LQMVEWARWVLTWQCEAMSKD 340
AEFG AAHW+YKEG SS + W R ++ WQ E + D
Sbjct: 358 AEFGIAAHWKYKEGGSPASSSSDAERFNWLRQLVDWQQEGGNDD 401
>gi|114566344|ref|YP_753498.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337279|gb|ABI68127.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 734
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 214/338 (63%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H E A++LA I ++ + A LLHD ++D +SY I + FG +A LV+
Sbjct: 38 RISGEPYIIHPCEVALILADIEMDTPTICAALLHDVIEDTPVSYLDILKEFGEEIALLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+++ +RE+ +A+ L MF+AMA D R ++IKLADRLHNM TL
Sbjct: 98 GVTKLTRIDFKSRED------AQAENLRRMFIAMARDIRVIIIKLADRLHNMRTLSYHAE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ A+ET+EIF PLA+RLGI +K +LE+L F ++ P+ + E++ +L + E
Sbjct: 152 AKQKVIARETMEIFAPLAHRLGIFRFKWELEDLAFYYMEPEMYYEVAKRLKQKRRERENY 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E+++ L +I + GR K+++SI+ KM+K+ +DEI+D +R++VE+
Sbjct: 212 VNDLVEQIKVGLHQIDIDADI-KGRPKNIFSIYKKMIKQGKDVDEIYDKIAIRVLVEDVR 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H +W +PG+ KDYI PK N YQSLHT + G G P EVQIRT EMH A
Sbjct: 271 DCYGVLGIIHTMWKPLPGRFKDYIATPKANMYQSLHTTLIGRGGEPFEVQIRTAEMHRTA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKEG + + W R +L WQ E
Sbjct: 331 EYGIAAHWRYKEGYNPRERKFDEKLSWLRQILEWQQEV 368
>gi|266623547|ref|ZP_06116482.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
gi|288864647|gb|EFC96945.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
Length = 779
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 225/337 (66%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAG+LHD ++D ++ D + + FG VA LV+
Sbjct: 82 RKSGEPYIIHPLCVAIILADLEMDKETIAAGILHDVVEDTVMTLDELGKEFGEEVALLVD 141
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QLS + ++A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 142 GVTKLTQLSW-----SMDKMELQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMKP 196
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A+ET+EI+ P+A+RLGIS K++L++L K+L PD + +L+ K+ D E+
Sbjct: 197 EKQKEKARETMEIYAPIAHRLGISKIKIELDDLSLKYLQPDVYYDLAEKISLKKDARESF 256
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V S ++++++ LK+ +I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +
Sbjct: 257 VKSIVDEVQEHLKEASIVAKV-DGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIIVDSVK 315
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+L+ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 316 DCYAALGVIHELYKPIPGRFKDYIAMPKPNMYQSLHTTLIGSNGQPFEIQIRTYEMHRTA 375
Query: 299 EFGFAAHWRYKE-GDCQHSSFV-LQMVEWARWVLTWQ 333
E+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 376 EYGIAAHWKYKESGSGQVAAGKEEEKLSWLRQILEWQ 412
>gi|428212424|ref|YP_007085568.1| RelA/SpoT family (p)ppGpp synthetase [Oscillatoria acuminata PCC
6304]
gi|428000805|gb|AFY81648.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoria acuminata PCC
6304]
Length = 754
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 209/340 (61%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A LL +G +S ++AAG LHD ++D ++ D I FG V LVE
Sbjct: 62 RKSGEPYIIHPIAVAGLLRELGGSSAMIAAGFLHDVVEDTEVTPDEIQERFGEEVRQLVE 121
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL++L
Sbjct: 122 GVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLESLA 174
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
KRQR A ET EIF PLANRLGI +K +LE+L FK+L PD + ++ + E E
Sbjct: 175 DVKRQRIALETREIFAPLANRLGIGRFKWELEDLSFKYLEPDSYRQMQDLVAEKRIDREN 234
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E L L++ I + GR K LY I+ KM ++ +EI+D+ +R++V+
Sbjct: 235 RLNKVTETLRLRLEELGIGCTEVSGRPKHLYGIYQKMQRQNKKFEEIYDVAAVRILVQKS 294
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL + H + +PG+ KDYI PK N YQSLHTVV G P+EVQIRT EMH
Sbjct: 295 EECYRALAIAHDAFRPLPGRFKDYIGLPKPNRYQSLHTVVLGPTGRPIEVQIRTVEMHHV 354
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
AE+G AAHW+YKE +S + W R +L WQ +
Sbjct: 355 AEYGIAAHWKYKEAGSSYSKLNNDDEKFTWLRQLLEWQSD 394
>gi|404482346|ref|ZP_11017573.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
gi|404344507|gb|EJZ70864.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
Length = 761
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/338 (44%), Positives = 218/338 (64%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D +S++ + FG VA+LV+
Sbjct: 65 RKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAISFEELSNIFGVDVANLVD 124
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QLS +N+ ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 125 GVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKP 179
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD + +LS KL + +
Sbjct: 180 EKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQF 239
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I+K + L D + + + GR K L+SI+ KM+ + T+D+I+D++ +R+IVE+
Sbjct: 240 VDEIIKKFNEHLSDTGMKYQI-SGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVA 298
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY AL H+++ +PG+ KDYI PK N YQSLHT + + P EVQIRT EMH A
Sbjct: 299 ACYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLISDTGQPFEVQIRTFEMHKTA 358
Query: 299 EFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
EFG AAHW+YKE G S +M W R +L WQ
Sbjct: 359 EFGIAAHWKYKESGSGTSAQGSEDAKM-NWLRQILEWQ 395
>gi|312898881|ref|ZP_07758269.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
gi|310620043|gb|EFQ03615.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
Length = 732
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 215/336 (63%), Gaps = 11/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R +GDPY+LH + A +LA + ++T + A LLHD ++D + I R FG VA LV+
Sbjct: 45 RVNGDPYILHPLAVAEILADMEIDTTTITASLLHDVVEDTEYMLEDIERIFGKEVAFLVD 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L +E+ + + + MFLAMA D R V+IKLADRLHNM TL +
Sbjct: 105 GVTKLNRLDYRTKEDQ------QVNSMRKMFLAMAKDIRVVVIKLADRLHNMRTLKYMRS 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDEAM 178
K++R A+ETLEI+ PLA+RLGI K +LE+L F+++ PD++ +L ++ E E +
Sbjct: 159 EKQKRIAQETLEIYAPLAHRLGIFNIKWELEDLSFRYMEPDKYYDLVDQMKEKRKVREEI 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V AI+ L++ L + +ISF + GR K YSI+ KM K + +I+D+Y +R+IV+ +
Sbjct: 219 VNEAIDVLKKTLTESSISFEI-NGRPKHFYSIYKKMKKDNRDLSQIYDLYAIRVIVDTVQ 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW +P + KDYI PK N YQSLHT V G P+E+QIRT +MH A
Sbjct: 278 DCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQPVEIQIRTWDMHHIA 337
Query: 299 EFGFAAHWRYKEGDC-QHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG Q ++ + + W R +L WQ
Sbjct: 338 EYGVAAHWRYKEGRASQKATGFDEKMGWLRNMLEWQ 373
>gi|121535597|ref|ZP_01667404.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
gi|121305837|gb|EAX46772.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
Length = 735
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 209/337 (62%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H + A +LA + ++ ++AGLLHD ++D ++ + I + FG +A LV+
Sbjct: 44 RVSGEEYITHPLGVAKILADLQIDALTISAGLLHDVVEDTPVTLEEIEKQFGKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ ++E + + MFLAMA D R VLIKLADRLHNM TL +P
Sbjct: 104 GVTKLSRMEYKSKEEQ------QLESYRKMFLAMAKDIRVVLIKLADRLHNMRTLKYMPP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ A+ETLEIF PLANRLGI + K +LE+L F+ L P+++ EL K+ + E A+
Sbjct: 158 AKQKEIARETLEIFAPLANRLGIFSIKWELEDLAFRFLEPEKYYELVEKVKQKRQEREAL 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AI+ L + L I + GR K YSI+ KM K + EI+D+ +R+IV+ +
Sbjct: 218 INEAIKILSERLTAMGIKAEI-QGRPKHFYSIYKKMQKDNKDLSEIYDLSAVRVIVDTIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL +VH LW +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH +
Sbjct: 277 DCYAALGIVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGLQGQPLEIQIRTVEMHRTS 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEG Q + W R +L W E
Sbjct: 337 EYGIAAHWRYKEGGKGTDRDFEQKLSWLRQLLEWHQE 373
>gi|315651813|ref|ZP_07904817.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485943|gb|EFU76321.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 762
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 217/337 (64%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D ++Y+ + FG VA+LV+
Sbjct: 65 RKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTVITYNELADMFGIDVANLVD 124
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QLS +N+ ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 125 GVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKP 179
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD + +LS KL + +
Sbjct: 180 EKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQF 239
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I+K Q L + + + GR K L+SI+ KM+ + T+D+I+D++ +R+IVE+
Sbjct: 240 VDEIIKKFSQHLSATGMKY-TINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVESVT 298
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL H+++ +PG+ KDYI PK N YQSLHT + + P EVQIRT EMH A
Sbjct: 299 DCYLALGTAHEIYKPIPGRFKDYIAMPKTNMYQSLHTTLISDTGQPFEVQIRTYEMHKTA 358
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQ 333
EFG AAHW+YKE + + + W R +L WQ
Sbjct: 359 EFGIAAHWKYKESGSGSEAKGAEDAKMNWLRQILEWQ 395
>gi|434402920|ref|YP_007145805.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
7417]
gi|428257175|gb|AFZ23125.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
7417]
Length = 756
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 212/341 (62%), Gaps = 14/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G + ++AAG LHD ++D ++ D I FG V LVE
Sbjct: 60 RKSGEPYIGHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTEVTIDQIEERFGPEVRQLVE 119
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS++ N SKT +A+ MFLAMA D R +++KLADRLHNM TL +P
Sbjct: 120 GVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQFMP 172
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
KR+R A+ET +IF PLANRLGI +K +LE+L FK+L P+ ++ + + E E
Sbjct: 173 DEKRRRIAQETRDIFAPLANRLGIWQFKWELEDLAFKYLEPEAFRQIQTYVSEKRAAREE 232
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+T + L Q L+ + + + GR K LY I+ KM +++ EI+D+ LR+IV+
Sbjct: 233 KLTKVTDILRQRLQQAGVRCVDVSGRTKHLYGIYQKMHRQQKEFHEIYDLAALRIIVQTN 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT+EMH
Sbjct: 293 EECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVMGLTGRPLEVQIRTQEMHHV 352
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
AE+G AAHW+YKE ++S V E W R +L WQ +
Sbjct: 353 AEYGIAAHWKYKESGGSNNSQVTGTDEKFTWLRQLLDWQSD 393
>gi|427717556|ref|YP_007065550.1| (p)ppGpp synthetase I SpoT/RelA [Calothrix sp. PCC 7507]
gi|427349992|gb|AFY32716.1| (p)ppGpp synthetase I, SpoT/RelA [Calothrix sp. PCC 7507]
Length = 756
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/341 (45%), Positives = 211/341 (61%), Gaps = 14/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G ++ ++AAG LHD ++D ++ + I FG V LVE
Sbjct: 60 RKSGEPYICHPVAVAGLLRDLGGSAAMIAAGFLHDVVEDTDVTIEQIGELFGPEVRQLVE 119
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS++ N SKT +A+ MFL+MA D R +++KLADRLHNM TL +P
Sbjct: 120 GVTKLSKI-------NFKSKTESQAENFRRMFLSMAQDIRVIVVKLADRLHNMRTLQVMP 172
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
KR+R A+ET +IF PLANRLGI +K +LE+L FK+L P+ E+ + E E
Sbjct: 173 DDKRRRIAQETRDIFAPLANRLGIWHFKWELEDLSFKYLEPESFREIQQHVAEKRTSREE 232
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ A L++ LK I L + GR K LYSI+ KM +++ EI+D+ LR+IV
Sbjct: 233 KLARATTILQERLKQAGIECLDVSGRPKHLYSIYQKMQRQQKEFHEIYDLAALRIIVRTN 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT+EMH
Sbjct: 293 EECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRPLEVQIRTQEMHHI 352
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
AE+G AAHW+YKE + S + E W R +L WQ +
Sbjct: 353 AEYGIAAHWKYKETGGSNVSNLTTSDEKFTWLRQLLEWQSD 393
>gi|253578285|ref|ZP_04855557.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850603|gb|EES78561.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 776
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 220/339 (64%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D +++Y+ + + FG+ VA LV+
Sbjct: 80 RKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDAVEDTWMTYEEVEKEFGSEVALLVD 139
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL QLS +A K V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 140 GVTKLGQLS------YSADKVEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMR 193
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEA 177
K+Q A+ET++I+ P+A RLGIS KV+L++L K+L PD + +L K L + E
Sbjct: 194 PEKQQEKARETMDIYAPIAMRLGISKIKVELDDLSLKYLKPDVYYDLVHKVALRKSEREQ 253
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V + ++++++ + D NI V GR K +SI+ KM+ + T+D+I+D++ +R++V+
Sbjct: 254 FVGAIVKEVKKHMDDANIKAQV-DGRVKHFFSIYKKMVNQDKTIDQIYDLFAVRILVDTV 312
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 313 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPFEIQIRTYEMHRT 372
Query: 298 AEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHW+YKE G + + W R +L WQ
Sbjct: 373 AEYGIAAHWKYKESSDGKAPVGKSEEEKLNWLRQILEWQ 411
>gi|126660186|ref|ZP_01731304.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
gi|126618551|gb|EAZ89302.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
Length = 744
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/352 (45%), Positives = 218/352 (61%), Gaps = 15/352 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +L +G + ++AAG LHD ++D ++ + I FG VA LVE
Sbjct: 55 RKSGEPYIAHPVAVAGILRDLGGDKAMIAAGFLHDVVEDTDVTVEEIEEMFGHEVALLVE 114
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N ++KT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 115 GVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEPLR 167
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A+ET EIF PLANRLGI K +LE+L FK+L P+ + E+ + + E E
Sbjct: 168 PEKQRRIARETKEIFAPLANRLGIWRVKWELEDLSFKYLEPEDYREIQNLISEKRIDRET 227
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + L++ L D IS L L GR K LY I+ KM ++ EI+D+ LR+IV+
Sbjct: 228 RIETVKNTLQKRLDDMGISILELQGRPKHLYGIYFKMQRQNKGFHEIYDLAALRIIVKTN 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH ++ +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 288 EECYRALAVVHDVFKPMPGRFKDYIGLPKPNRYQSLHTTVVGLNGRPLEIQIRTLEMHHI 347
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQCEAMSKDRSCVGN 346
AE+G AAHW+YKE G H+ F + W R +L WQ + + D+ V N
Sbjct: 348 AEYGIAAHWKYKETGGSNHTHFSNEDEKFTWLRQLLDWQND-LKDDQEYVDN 398
>gi|402313175|ref|ZP_10832096.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
gi|400366935|gb|EJP19955.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
Length = 761
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/338 (44%), Positives = 218/338 (64%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D +S++ + FG VA+LV+
Sbjct: 65 RKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAISFEELSDIFGVDVANLVD 124
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QLS +N+ ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 125 GVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKP 179
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD + +LS KL + +
Sbjct: 180 EKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQF 239
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I+K + L D + + + GR K L+SI+ KM+ + T+D+I+D++ +R+IVE+
Sbjct: 240 VDEIIKKFNEHLSDTGMKYQI-SGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVA 298
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY AL H+++ +PG+ KDYI PK N YQSLHT + + P EVQIRT EMH A
Sbjct: 299 ACYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLISDTGQPFEVQIRTFEMHKTA 358
Query: 299 EFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
EFG AAHW+YKE G S +M W R +L WQ
Sbjct: 359 EFGIAAHWKYKESGSGTSAQGSEDAKM-NWLRQILEWQ 395
>gi|33864375|ref|NP_895935.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Prochlorococcus
marinus str. MIT 9313]
gi|33641155|emb|CAE22285.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9313]
Length = 776
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 156/345 (45%), Positives = 210/345 (60%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA+++V+AAG LHD ++D L+ + + FGA V +LV
Sbjct: 84 FRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDLTPEQLEDYFGAEVRELV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + N T +A+ L MFLAMA D R VL+KLADRLHNM TL +L
Sbjct: 144 EGVTKLGGI------NFTNHTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTLGSLQ 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++ E
Sbjct: 198 ADKQQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQQEVATKRSEREN 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +E L + L + + GR K LY I KM +++ EI D+ LR+I +
Sbjct: 258 RLANTVELLTERLASAGLDTCEVSGRPKHLYGIWSKMQRQQKAFHEIFDVAALRIIAPSV 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G+ P+EVQIRT MH
Sbjct: 318 ETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGKHR-PIEVQIRTPGMHRV 376
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
+EFG AAHW YKEG ++ + W R ++ WQ E + D +
Sbjct: 377 SEFGIAAHWEYKEGGSPAAANK-ERFNWLRQLVEWQQEGGNDDHN 420
>gi|399887294|ref|ZP_10773171.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
arbusti SL206]
Length = 736
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 153/351 (43%), Positives = 216/351 (61%), Gaps = 23/351 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H E A +LA +G + +AAGLLHD ++D SY+ + R F + VADLVE
Sbjct: 37 RESGEPYIIHPEEVACILAEMGMDQNTIAAGLLHDVIEDTEYSYEDVTREFNSEVADLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++S +E +AD + M LAMA D R +LIKL+DRLHNM TL + +
Sbjct: 97 GVTKLGKISYKTKEEQ------QADNVRKMLLAMAKDIRVILIKLSDRLHNMRTLRYMSV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFDE 176
K++ AKETL+IF PLA+RLGIS K +LE+L F+++ P+++ EL S K VE E
Sbjct: 151 KKQKEKAKETLDIFAPLAHRLGISKIKWELEDLAFRYMKPNEYYELVDDISEKRVE--RE 208
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ + L + L++ NI + GR K YSI+ KM+ K T+D+I D+ +R++V +
Sbjct: 209 EYIKDIVVDLHKNLEEANI-LADIDGRPKHFYSIYRKMVNKNKTLDQIFDLTAIRILVND 267
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+CY L +VH ++ +PG+ KDYI PK N YQSLH+ V G E+QIRT EMH
Sbjct: 268 IRECYTVLGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKSFEIQIRTYEMHK 327
Query: 297 QAEFGFAAHWRYKEG-----DCQHSSFVL----QMVEWARWVLTWQCEAMS 338
AE+G AAHW+YKEG D + S V + W R +L WQ E +
Sbjct: 328 TAEYGIAAHWKYKEGITEEADSKDSEPVKADFNTKLTWVREMLDWQKETTN 378
>gi|354616924|ref|ZP_09034463.1| (p)ppGpp synthetase I, SpoT/RelA [Saccharomonospora paurometabolica
YIM 90007]
gi|353218722|gb|EHB83422.1| (p)ppGpp synthetase I, SpoT/RelA [Saccharomonospora paurometabolica
YIM 90007]
Length = 778
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 154/345 (44%), Positives = 217/345 (62%), Gaps = 24/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG V+ LV+
Sbjct: 91 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLEQLGEDFGEKVSQLVD 150
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 151 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 202
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV-------EC 173
K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+ +LV +
Sbjct: 203 EKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIV-RLVADRAPSRDT 261
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
+ ++ ++LE++ D + GR K YSIH KM+ ++ +D+IHD+ G+R++
Sbjct: 262 YLRWVIGELTKQLEESRVDAKVE-----GRPKHYYSIHQKMIVRERELDDIHDLVGVRIL 316
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
VE+ DCY A+ VVH LW +PG+ KDY+ +P+F YQSLHT V G PLEVQIRT E
Sbjct: 317 VEDVRDCYAAMGVVHALWQPMPGRFKDYVAQPRFGVYQSLHTTVIGPDGKPLEVQIRTYE 376
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
MH AE+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 377 MHRTAEYGIAAHWRYKETKGTHRGNAVDVDEMAWMRQLLDWQREA 421
>gi|302527845|ref|ZP_07280187.1| GTP pyrophosphokinase [Streptomyces sp. AA4]
gi|302436740|gb|EFL08556.1| GTP pyrophosphokinase [Streptomyces sp. AA4]
Length = 777
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 153/341 (44%), Positives = 210/341 (61%), Gaps = 15/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG V +LV+
Sbjct: 90 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLEQLKADFGDKVGELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL + EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 150 GVTKLDKV-KLG-------TSAEAETIRKMVIAMAKDPRVLVIKLADRLHNMRTMRFLPP 201
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 202 EKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDTY 261
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L L I+ V GR K YSIH KM+ + +D+IHD+ G+R++VE+
Sbjct: 262 LRKVIADLTNNLVSSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEDVR 320
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW VPG+ KDYI +P+F YQSLHT V G PLEVQIRT +MH A
Sbjct: 321 DCYAAMGVVHALWQPVPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTYDMHRTA 380
Query: 299 EFGFAAHWRYKEGDCQHSS---FVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKE H+S L + W R +L WQ EA
Sbjct: 381 EYGIAAHWRYKETKGTHASNNAMELDEIAWMRQLLDWQREA 421
>gi|153941234|ref|YP_001392337.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
gi|170754462|ref|YP_001782694.1| GTP pyrophosphokinase [Clostridium botulinum B1 str. Okra]
gi|384463312|ref|YP_005675907.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
gi|429246540|ref|ZP_19209858.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
gi|152937130|gb|ABS42628.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
gi|169119674|gb|ACA43510.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum B1 str.
Okra]
gi|295320329|gb|ADG00707.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
gi|428756456|gb|EKX79010.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
Length = 723
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 211/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H E A++L +G + + AGL+HD ++D +Y+ + + FG VADLV
Sbjct: 37 RISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQYTYEDVAKEFGNEVADLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM D R +LIKLADRLHNM TL +P+
Sbjct: 97 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP+++ L K+ E E
Sbjct: 151 EKQKEKAQETLDIYAPLAHRLGISKIKWELEDLAFRYINPNEYYFLVRKIAEKRAEREEH 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L+Q LK I + GR K YSI+ KM K +D+I D+ +R++V+ +
Sbjct: 211 IKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRILVDTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G G P E+QIRT EMH A
Sbjct: 270 DCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPFEIQIRTYEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG ++S+ + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEG-VENSNNIDLKLTWLREMLDWQKET 366
>gi|78185706|ref|YP_378140.1| metal dependent phosphohydrolase [Synechococcus sp. CC9902]
gi|78170000|gb|ABB27097.1| metal dependent phosphohydrolase [Synechococcus sp. CC9902]
Length = 776
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 158/344 (45%), Positives = 208/344 (60%), Gaps = 11/344 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA++ V+AAG LHD ++D +S D I FG+ V +LV
Sbjct: 84 FRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTDVSLDEIQEHFGSEVRELV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + R +A+ L MF+AMA D R VL+KLADR+HNM TL AL
Sbjct: 144 EGVTKLGGIHFNDRTE------AQAENLRRMFMAMASDIRVVLVKLADRVHNMRTLGALK 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++ E
Sbjct: 198 EEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQQEVATKRSEREQ 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + L + L+ + + GR K LY I KM +++ EI+D+ LR+I +
Sbjct: 258 RLGVTVGLLNERLQRAGLEGCEVSGRPKHLYGIWSKMERQQKAFHEIYDVAALRIITPSV 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 318 ETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTLEMHQV 376
Query: 298 AEFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQCEAMSKD 340
AEFG AAHW+YKEG S S + W R ++ WQ + + D
Sbjct: 377 AEFGIAAHWKYKEGGSPASCSSDAERFNWLRQLVDWQQKGGNDD 420
>gi|168187498|ref|ZP_02622133.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
botulinum C str. Eklund]
gi|169294579|gb|EDS76712.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
botulinum C str. Eklund]
Length = 729
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 212/338 (62%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A +LA +G + +AA LLHD ++D +Y+ + R F + VA+LVE
Sbjct: 37 RISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTDYTYEDVERDFNSEVANLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +++ + M LAM D R +LIKLADRLHNM TL + +
Sbjct: 97 GVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVILIKLADRLHNMRTLKYMTV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+++ +L K+ E E
Sbjct: 151 EKQKEKAKETLDIYAPLAHRLGISKVKWELEDLALRYLNPNEYYDLVRKVAEKRKEREEY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L++ L + I + GR K YSI+ KM+ K T+D+I D+ +R++VE+ +
Sbjct: 211 IERIIHELKEKLDEAGIKSEI-EGRPKHFYSIYRKMVIKNKTIDQIFDLTAVRILVEDVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLH+ V G P E+QIRT EMH +
Sbjct: 270 DCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPFEIQIRTYEMHYTS 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG+ + W R VL WQ E
Sbjct: 330 EYGIAAHWKYKEGEKNSDKDFEAKLAWLREVLEWQRET 367
>gi|87300813|ref|ZP_01083655.1| metal dependent phosphohydrolase [Synechococcus sp. WH 5701]
gi|87284684|gb|EAQ76636.1| metal dependent phosphohydrolase [Synechococcus sp. WH 5701]
Length = 779
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 210/345 (60%), Gaps = 10/345 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RA+G+PY++H V A LL IGA++ V+AAG LHD ++D ++ + + FGA V LV
Sbjct: 86 VRATGEPYIIHPVAVADLLRDIGASAGVIAAGFLHDVVEDTDVTPEELEVHFGAEVRALV 145
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + + T +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 146 EGVTKLGGI------HFTNHTEAQAENLRRMFLAMASDIRVVLVKLADRLHNMRTLGALK 199
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+ + E+ ++ E
Sbjct: 200 PEKQQRIARETREIYAPLANRLGIGRFKWELEDLAFKILEPEAYGEIKQQVASKRSDREE 259
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + L Q L+ + + GR K LY I KM ++ EI D+ LR++ N
Sbjct: 260 RLAATVALLMQRLQGAGLHDCEVTGRPKHLYGIWSKMQMQQKAFHEIFDVAALRILTPNL 319
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 320 EGCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTTEMHQV 378
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
AE+G AAHW+YKEG S+ + W R ++ WQ + +D S
Sbjct: 379 AEYGIAAHWKYKEGGSPASAGAAERFNWLRQLVDWQQDDGGEDSS 423
>gi|333897247|ref|YP_004471121.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112512|gb|AEF17449.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 718
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 212/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE AM+LA + + + +A+GLLHD ++D +SY+ I FG +ADLV+
Sbjct: 38 RNSGEPYIVHPVEVAMILADLELDVSTIASGLLHDVIEDTSISYEDIKNEFGQEIADLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL + ++ +A+ + M +AMA D R ++IKLADRLHNM TL L
Sbjct: 98 GVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIMIKLADRLHNMRTLKFLSE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD++ L K+ + E
Sbjct: 152 EKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDEYYSLVEKVAKKRKEREES 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IEKL++ L + I V GR K YSI+ KM ++ T ++I+D+ +R+IV +
Sbjct: 212 IKELIEKLKEKLNEIGIKADV-DGRPKHFYSIYKKMKQQNKTFEQIYDLMAVRVIVNTVK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VVH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT +MH A
Sbjct: 271 DCYGTLGVVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWDMHRTA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKEG F ++ W R +L WQ E
Sbjct: 331 EYGIAAHWKYKEGKSYEDEFDAKL-SWLRQLLEWQRE 366
>gi|148381010|ref|YP_001255551.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
gi|153931540|ref|YP_001385381.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 19397]
gi|153936238|ref|YP_001388788.1| GTP pyrophosphokinase [Clostridium botulinum A str. Hall]
gi|226950488|ref|YP_002805579.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
gi|387819316|ref|YP_005679663.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
gi|148290494|emb|CAL84622.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
gi|152927584|gb|ABS33084.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A str.
ATCC 19397]
gi|152932152|gb|ABS37651.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A str.
Hall]
gi|226842731|gb|ACO85397.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
gi|322807360|emb|CBZ04934.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
Length = 723
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 211/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H E A++L +G + + AGL+HD ++D +Y+ + + FG VADLV
Sbjct: 37 RISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQYTYEDVAKEFGNEVADLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM D R +LIKLADRLHNM TL +P+
Sbjct: 97 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP+++ L K+ E E
Sbjct: 151 EKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEH 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L+Q LK I + GR K YSI+ KM K +D+I D+ +R++V+ +
Sbjct: 211 IKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRILVDTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G G P E+QIRT EMH A
Sbjct: 270 DCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPFEIQIRTYEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG ++S+ + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEG-VENSNNIDLKLTWLREMLDWQKET 366
>gi|434392415|ref|YP_007127362.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
gi|428264256|gb|AFZ30202.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
Length = 761
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 211/339 (62%), Gaps = 12/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G +S ++AAG LHD ++D +S + I + FG V LVE
Sbjct: 62 RKSGEPYICHPVAVAGLLRDLGGSSAMIAAGFLHDVVEDTDVSIEDIEQRFGNEVRQLVE 121
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ S+ +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 122 GVTKLSEFSQ-----KFSSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLA 176
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A ET EIF PLANRLGI +K +LE+L FK+L P+ + ++ + E EA
Sbjct: 177 PEKQRRIALETREIFAPLANRLGIGRFKWELEDLAFKYLEPEAYRQIQDLVAEKRVNREA 236
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+T I+ L ++ I + + GR K LY I+ KM +++ EI+DI +R+IV +
Sbjct: 237 RLTRVIDVLTARMEQAEIKCIDISGRPKHLYGIYQKMQRQQKEFHEIYDIAAIRIIVNTK 296
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 EECYRALAEVHDAFKPIPGRFKDYIGLPKPNRYQSLHTAVVGFTGRPLEVQIRTLEMHHV 356
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE G HS + W R +L WQ
Sbjct: 357 AEYGIAAHWKYKETGSSSHSQLKTSEEKFTWLRQILEWQ 395
>gi|331269250|ref|YP_004395742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium botulinum BKT015925]
gi|329125800|gb|AEB75745.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium botulinum BKT015925]
Length = 730
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 215/339 (63%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A +LA +G + +AA LLHD ++D +Y+ + R F + VA+LVE
Sbjct: 37 RVSGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTDYTYEDVERDFNSEVANLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +++ + M LAM D R +LIKLADRLHNM TL + +
Sbjct: 97 GVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVILIKLADRLHNMRTLKYMTV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+++ +L K+ E E
Sbjct: 151 EKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLNPNEYYDLVRKVAEKRKEREEY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L + L+D I + GR K YSI+ KM+ K T+D+I D+ +R++VE+ +
Sbjct: 211 IERIIHELSEKLEDAGIKSEI-AGRPKHFYSIYRKMVIKNKTIDQIFDLTAVRILVEDVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLH+ V G P E+QIRT +MH +
Sbjct: 270 DCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPFEIQIRTYDMHNTS 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQCEA 336
E+G AAHW+YKEG ++S + + W R VL WQ E
Sbjct: 330 EYGIAAHWKYKEGFSKNSDNDFEAKLAWLREVLEWQRET 368
>gi|358066224|ref|ZP_09152755.1| hypothetical protein HMPREF9473_04818 [Clostridium hathewayi
WAL-18680]
gi|356695553|gb|EHI57181.1| hypothetical protein HMPREF9473_04818 [Clostridium hathewayi
WAL-18680]
Length = 762
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 223/339 (65%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AG+LHD ++D ++ D + + FG+ VA LV+
Sbjct: 65 RKSGEPYIIHPLCVAIILADLELDKESIVAGILHDVVEDTVMTLDEVAKEFGSEVALLVD 124
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QLS + + ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 125 GVTKLTQLSW-----SMDKQEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMTP 179
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A+ET++I+ P+A+RLGIS K++L++L K+L PD + +L+ K+ D EA
Sbjct: 180 EKQKEKARETMDIYSPIAHRLGISKIKIELDDLSLKYLEPDVYYDLAEKISLRKDAREAF 239
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E+++ + + I V GR K +SI+ KM+ + T+D+I+D++ +R+IVE+ +
Sbjct: 240 VQGIVEEVKSHMVEAGIDARV-EGRVKHFFSIYKKMVNQDKTLDQIYDLFAVRIIVESVK 298
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+L+ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 299 DCYAALGVIHELYKPIPGRFKDYIAMPKPNMYQSLHTTLIGSNGQPFEIQIRTFEMHRTA 358
Query: 299 EFGFAAHWRYKE-GDCQHSSFVLQM-VEWARWVLTWQCE 335
EFG AAHW+YKE G Q ++ + + W R +L WQ +
Sbjct: 359 EFGIAAHWKYKESGSGQIAAGSEEAKLSWLRQILEWQTD 397
>gi|170758445|ref|YP_001788379.1| GTP pyrophosphokinase [Clostridium botulinum A3 str. Loch Maree]
gi|169405434|gb|ACA53845.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A3 str.
Loch Maree]
Length = 723
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 211/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H E A++L +G + + AGL+HD ++D +Y+ + + FG VADLV
Sbjct: 37 RISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQYTYEDVAKEFGNEVADLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM D R +LIKLADRLHNM TL +P+
Sbjct: 97 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP+++ L K+ E E
Sbjct: 151 EKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEH 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L+Q LK I + GR K YSI+ KM K +D+I D+ +R++V+ +
Sbjct: 211 IKEIISNLQQNLKRAGIESEI-DGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRILVDTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G G P E+QIRT EMH A
Sbjct: 270 DCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPFEIQIRTYEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG ++S+ + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEG-VENSNNIDLKLTWLREMLDWQKET 366
>gi|138896146|ref|YP_001126599.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
gi|134267659|gb|ABO67854.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
Length = 732
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 211/339 (62%), Gaps = 10/339 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + ++T +AAG LHD ++D + + + R FGA VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILADLKMDATTIAAGFLHDVVEDTEATKEDLEREFGADVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MFLAMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 157 AEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ + L + +I + GR K +YSI+ KM+ + +EI+D+ +R+IV +
Sbjct: 217 YLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTFEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 336 AEFGIAAHWAYKEGKTVKPNSFEEKLSWFREILEWQNDA 374
>gi|168181749|ref|ZP_02616413.1| GTP diphosphokinase [Clostridium botulinum Bf]
gi|237796515|ref|YP_002864067.1| GTP pyrophosphokinase [Clostridium botulinum Ba4 str. 657]
gi|182675126|gb|EDT87087.1| GTP diphosphokinase [Clostridium botulinum Bf]
gi|229261873|gb|ACQ52906.1| RelA/SpoT family protein [Clostridium botulinum Ba4 str. 657]
Length = 723
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 211/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H E A++L +G + + AGL+HD ++D +Y+ + + FG VADLV
Sbjct: 37 RISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQYTYEDVAKEFGNEVADLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM D R +LIKLADRLHNM TL +P+
Sbjct: 97 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP+++ L K+ E E
Sbjct: 151 EKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEH 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L+Q LK I + GR K YSI+ KM K +D+I D+ +R++V+ +
Sbjct: 211 IKEIISNLQQNLKRAGIESEI-DGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRILVDTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G G P E+QIRT EMH A
Sbjct: 270 DCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPFEIQIRTYEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG ++S+ + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEG-VENSNNIDLKLTWLREMLDWQKET 366
>gi|312143973|ref|YP_003995419.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium hydrogeniformans]
gi|311904624|gb|ADQ15065.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium hydrogeniformans]
Length = 715
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 220/335 (65%), Gaps = 11/335 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H + AM+LA + + + A ++HD ++D ++ + I + FG VA +VE
Sbjct: 38 RVSGEPFVDHPLGVAMILADLELDIISIVASMMHDVVEDTEITSEDIRKEFGDEVAHIVE 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+++ +E+ +A+ L MF+AMA D R VLIKLADRLHNM TL+ L
Sbjct: 98 GVTKLTRMQFKTKEDQ------QAESLRKMFVAMAEDIRVVLIKLADRLHNMRTLNYLKK 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
KR+ ++ETLEI+ PLA+RLG+S K +LE+LCF++L PD + E+S K+ + E
Sbjct: 152 EKRKEKSRETLEIYAPLAHRLGMSKLKWELEDLCFRYLKPDMYYEVSHKVQTNREQREKS 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AIEKL++ L+ +I + GR K L+SI+ KM +K++ DEI+D+ +R++VEN +
Sbjct: 212 IQEAIEKLKETLEKHDIESEIY-GRPKHLFSIYNKMKRKEVEFDEIYDLTAVRVLVENVK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L ++H++W +PG+ KDYI PK N YQSLHT V PLEVQIRT +MH A
Sbjct: 271 ECYEVLGIIHEIWKPMPGRFKDYIAMPKSNMYQSLHTTVIAPSGDPLEVQIRTYDMHKTA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG F + + W R +L WQ
Sbjct: 331 EYGIAAHWRYKEGKVGDEKFE-EKLSWLRRLLEWQ 364
>gi|429766249|ref|ZP_19298523.1| GTP diphosphokinase [Clostridium celatum DSM 1785]
gi|429185229|gb|EKY26218.1| GTP diphosphokinase [Clostridium celatum DSM 1785]
Length = 727
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 218/344 (63%), Gaps = 22/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H +E A +LA +G +++ + AGLLHD ++D +Y+ I F +A+LV
Sbjct: 37 RESGEPYIIHPIEVATILAELGMDTSTIVAGLLHDVIEDTDYTYEDIKNIFSEEIANLVS 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K++++ ++E +AD M LAMA D R ++IKLADRLHNM TL +
Sbjct: 97 GVTKITKMEYKSKEEQ------QADNFRKMLLAMANDIRVIIIKLADRLHNMRTLKYMSK 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE------CF 174
K+++ AKETL+I+ PLA+RLGIS K +LE+LCF++L+ +++ +L ++ E +
Sbjct: 151 EKQKKTAKETLDIYAPLAHRLGISKVKWELEDLCFRYLHEEEYYDLVKQIAEKRVERETY 210
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
+ EKL++A D +I GR K YSI+ KM+ K ++++I D+ +R++V
Sbjct: 211 IAKTIKDLYEKLDEAGIDSDID-----GRPKHFYSIYRKMVTKNKSIEQIFDLTAIRILV 265
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY+ L VVH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EM
Sbjct: 266 NSVKDCYEVLGVVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGKTFEIQIRTFEM 325
Query: 295 HLQAEFGFAAHWRYKEGDC---QHSSFVLQMVEWARWVLTWQCE 335
H AE+G AAHW+YKEGD + SF ++V W R +L WQ E
Sbjct: 326 HKTAEYGIAAHWKYKEGDSGDNKEKSFENKLV-WLRDMLEWQKE 368
>gi|81300186|ref|YP_400394.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
gi|81169067|gb|ABB57407.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
Length = 779
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 154/338 (45%), Positives = 208/338 (61%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ H V A LL +G ++ V+ AG LHD ++D ++ + I FGA V LVE
Sbjct: 76 RASGEPYIAHPVAVAGLLRDLGGSAAVICAGFLHDVVEDTEVTPEEIEERFGAEVRQLVE 135
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +L+KLADRLHNM TL+ L
Sbjct: 136 GVTKLSKF-------NFSSKTEQQAENFRRMFLAMAQDIRVILVKLADRLHNMRTLEHLA 188
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R AKET++IF PLANRLGI K +LE+L FK+L+ +Q+ + + E EA
Sbjct: 189 STKQKRIAKETMDIFAPLANRLGIGRVKWELEDLSFKYLDAEQYRSIQGHVAEKRADREA 248
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +++ L L I + + GR K LYSI+ KM ++ EI D+ LR+IV +
Sbjct: 249 RLEQSVQILRDRLSQIGIEPVDVSGRPKHLYSIYRKMQMQQKEFHEIFDVAALRIIVNSN 308
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 309 DECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTTVIGLSGRPLEIQIRTLEMHRI 368
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE F + W R +L WQ
Sbjct: 369 AEYGIAAHWKYKESGGSAGKFSTEDEKFTWLRQLLEWQ 406
>gi|196250100|ref|ZP_03148794.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
gi|196210284|gb|EDY05049.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
Length = 732
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 211/339 (62%), Gaps = 10/339 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + ++T +AAG LHD ++D + + + R FGA VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILADLKMDATTIAAGFLHDVVEDTEATKEDLEREFGADVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MFLAMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 157 AEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ + L + +I + GR K +YSI+ KM+ + +EI+D+ +R+IV +
Sbjct: 217 YLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTFEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 336 AEFGIAAHWAYKEGKTVKPNSFEEKLSWFREILDWQNDA 374
>gi|88809826|ref|ZP_01125332.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805]
gi|88786210|gb|EAR17371.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805]
Length = 777
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 206/343 (60%), Gaps = 10/343 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ + + FG V LV
Sbjct: 84 FRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPEQLESHFGPEVRGLV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 144 EGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTLGALR 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++ E
Sbjct: 198 EEKRQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVATKRSEREE 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L L + + GR K LY I KM +++ EI+D+ LR++ +
Sbjct: 258 RLGVTVQLLRDRLAAAGLENCDVNGRPKHLYGIWTKMQRQQKAFHEIYDVAALRILTPSV 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 318 EACYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTLEMHQV 376
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
+EFG AAHW+YKEG + + W R ++ WQ E S D
Sbjct: 377 SEFGIAAHWKYKEGGSPAAGGDTERFNWLRQLVDWQQEGGSDD 419
>gi|168179553|ref|ZP_02614217.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
gi|182669850|gb|EDT81826.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
Length = 723
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 211/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H E A++L +G + + AGL+HD ++D +Y+ + + FG VADLV
Sbjct: 37 RISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQYTYEDVAKEFGNEVADLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM D R +LIKLADRLHNM TL +P+
Sbjct: 97 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP+++ L K+ E E
Sbjct: 151 EKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEH 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L+Q LK I + GR K YSI+ KM K +D+I D+ +R++V+ +
Sbjct: 211 IKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRILVDTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G G P E+QIRT EMH A
Sbjct: 270 DCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPFEIQIRTYEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKE D ++S+ + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKE-DVENSNNIDLKLTWLREMLDWQKET 366
>gi|418463632|ref|ZP_13034628.1| (p)ppGpp synthetase, RelA/SpoT family protein [Saccharomonospora
azurea SZMC 14600]
gi|359732115|gb|EHK81136.1| (p)ppGpp synthetase, RelA/SpoT family protein [Saccharomonospora
azurea SZMC 14600]
Length = 774
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 212/340 (62%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 88 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSVEQLTNEFGEKVAQLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 148 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 200 EKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDTY 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L L + I+ V GR K YSIH KM+ + +D+IHD+ G+R++VE
Sbjct: 260 LRWVIGELTNQLGESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEEVR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 319 DCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTHEMHRTA 378
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 379 EYGIAAHWRYKETRGTHRGNAVDIDEMAWMRQLLDWQREA 418
>gi|381165523|ref|ZP_09874753.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Saccharomonospora azurea NA-128]
gi|379257428|gb|EHY91354.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Saccharomonospora azurea NA-128]
Length = 781
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 212/340 (62%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 95 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSVEQLTNEFGEKVAQLVD 154
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 155 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 206
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 207 EKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDTY 266
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L L + I+ V GR K YSIH KM+ + +D+IHD+ G+R++VE
Sbjct: 267 LRWVIGELTNQLGESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEEVR 325
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 326 DCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTHEMHRTA 385
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 386 EYGIAAHWRYKETRGTHRGNAVDIDEMAWMRQLLDWQREA 425
>gi|260434691|ref|ZP_05788661.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Synechococcus sp. WH 8109]
gi|260412565|gb|EEX05861.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Synechococcus sp. WH 8109]
Length = 777
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 158/344 (45%), Positives = 208/344 (60%), Gaps = 11/344 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA++ V+AAG LHD ++D ++ D I FG+ V +LV
Sbjct: 84 FRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTDVTPDQIELHFGSEVRELV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + R +A+ L MFLAMA + R VL+KLADRLHNM TL AL
Sbjct: 144 EGVTKLGGIHFNDR------TEAQAENLRRMFLAMASNIRVVLVKLADRLHNMRTLGALK 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++ E
Sbjct: 198 EEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQEEVATKRSEREQ 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + L + L+ + + GR K L+ I KM +++ EI+D+ LR++ N
Sbjct: 258 RLGVTVGLLNERLERAGLEHCEVSGRPKHLFGIWSKMQRQQKEFHEIYDVAALRILTPNV 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 318 ESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTLEMHHV 376
Query: 298 AEFGFAAHWRYKEGDCQHSSFV-LQMVEWARWVLTWQCEAMSKD 340
AEFG AAHW+YKEG SS + W R ++ WQ E + D
Sbjct: 377 AEFGIAAHWKYKEGGSPASSGSDAERFNWLRQLVDWQQEGGNDD 420
>gi|37522317|ref|NP_925694.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
gi|35213317|dbj|BAC90689.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
Length = 758
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 215/338 (63%), Gaps = 12/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+LH V+ A +L +G++S +VAAG LHD ++D + + + + FG V LVE
Sbjct: 76 RASGEPYILHPVQVAGMLRELGSDSAMVAAGFLHDIIEDTATTSEDLEQLFGEQVRLLVE 135
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+ + ++E +A+ MFLAMA D R +++KLADRLHNM TLD LP
Sbjct: 136 GVTKLSKFTFDSKEER------QAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLDFLPT 189
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV---ECFDEA 177
K++R A+ET++IF PLANRLGI +K +LE+L FK+L+PD + + KLV E
Sbjct: 190 HKQRRIAQETMDIFAPLANRLGIWRFKWELEDLAFKYLDPDAYRHMQ-KLVSQKRAEREQ 248
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ + + ++I + GR K L+ I+ KM +++ EI+D+ +R+IVE +
Sbjct: 249 FIDQVVQTIRAEIDRQHIHGEI-TGRPKHLWGIYQKMQRQQKEFHEIYDVSAVRIIVEQQ 307
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH
Sbjct: 308 EECYRALSIVHNKFRPIPGRFKDYIGLPKPNRYQSLHTAVVGPEGKPLEVQIRTVDMHRI 367
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE + + W R +L WQ +
Sbjct: 368 AEYGIAAHWKYKEAGSVVVASQEEKFTWLRQLLDWQSD 405
>gi|56750188|ref|YP_170889.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
gi|56685147|dbj|BAD78369.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
Length = 764
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 154/338 (45%), Positives = 208/338 (61%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ H V A LL +G ++ V+ AG LHD ++D ++ + I FGA V LVE
Sbjct: 61 RASGEPYIAHPVAVAGLLRDLGGSAAVICAGFLHDVVEDTEVTPEEIEERFGAEVRQLVE 120
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +L+KLADRLHNM TL+ L
Sbjct: 121 GVTKLSKF-------NFSSKTEQQAENFRRMFLAMAQDIRVILVKLADRLHNMRTLEHLA 173
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R AKET++IF PLANRLGI K +LE+L FK+L+ +Q+ + + E EA
Sbjct: 174 STKQKRIAKETMDIFAPLANRLGIGRVKWELEDLSFKYLDAEQYRSIQGHVAEKRADREA 233
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +++ L L I + + GR K LYSI+ KM ++ EI D+ LR+IV +
Sbjct: 234 RLEQSVQILRDRLSQIGIEPVDVSGRPKHLYSIYRKMQMQQKEFHEIFDVAALRIIVNSN 293
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 294 DECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTTVIGLSGRPLEIQIRTLEMHRI 353
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE F + W R +L WQ
Sbjct: 354 AEYGIAAHWKYKESGGSAGKFSTEDEKFTWLRQLLEWQ 391
>gi|383827879|ref|ZP_09982968.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora
xinjiangensis XJ-54]
gi|383460532|gb|EID52622.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora
xinjiangensis XJ-54]
Length = 782
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 214/340 (62%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 95 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQLTDEFGEKVAQLVD 154
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 155 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 206
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 207 EKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDTY 266
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L + L++ +S V GR K YSIH KM+ + +D+IHD+ G+R++V+
Sbjct: 267 LRWVIGELTRQLEESRLSAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVDEVR 325
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 326 DCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTHEMHRTA 385
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 386 EYGIAAHWRYKETKGTHRGNAVDIDEMAWMRQLLDWQREA 425
>gi|421836333|ref|ZP_16270846.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
gi|409741806|gb|EKN41461.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
Length = 465
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 213/347 (61%), Gaps = 11/347 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H E A++L +G + + AGL+HD ++D +Y+ + + FG VADLV
Sbjct: 37 RISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQYTYEDVAKEFGNEVADLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM D R +LIKLADRLHNM TL +P+
Sbjct: 97 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP+++ L K+ E E
Sbjct: 151 EKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEH 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L+Q LK I + GR K YSI+ KM K +D+I D+ +R++V+ +
Sbjct: 211 IKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRILVDTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G G P E+QIRT EMH A
Sbjct: 270 DCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPFEIQIRTYEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVG 345
E+G AAHW+YKE D ++S+ + + W R +L WQ E + G
Sbjct: 330 EYGIAAHWKYKE-DVENSNNIDLKLTWLREMLDWQKETTDPEEFMQG 375
>gi|365840434|ref|ZP_09381623.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
gi|364561473|gb|EHM39373.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
Length = 734
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 214/337 (63%), Gaps = 13/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+LH + A +LA + ++T + A L+HD ++D + + + R FG VA LV+
Sbjct: 45 RVSGEPYILHPLAVAQILADMEIDTTTITASLMHDVVEDTTYTLEDMERLFGKEVAFLVD 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L +E+ + + + MFLAMA D R V+IKLADRLHNM TL +
Sbjct: 105 GVTKLNRLDYRTKEDQ------QVNSMRKMFLAMAKDVRVVVIKLADRLHNMRTLKFMRS 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++R A+ETLEI+ PLA+RLGI K +LE+L F+++ PD++ +L ++ E E +
Sbjct: 159 EKQKRIAQETLEIYAPLAHRLGIFNIKWELEDLSFRYMEPDKYYDLVDQMKEKRQVREEI 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V AI+ L++ L + ISF + GR K YSI+ KM K + +I+D+Y +R+IV +
Sbjct: 219 VNEAIDVLKETLSESGISFEI-NGRPKHFYSIYKKMKKDNRDLSQIYDLYAIRVIVNTVQ 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW +P + KDYI PK N YQSLHT V G P+E+QIRT EMH A
Sbjct: 278 DCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQPVEIQIRTWEMHHIA 337
Query: 299 EFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG + S F +M W R +L WQ
Sbjct: 338 EYGVAAHWRYKEGHAAGRTSEFDEKM-GWLRNLLEWQ 373
>gi|375100160|ref|ZP_09746423.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora cyanea
NA-134]
gi|374660892|gb|EHR60770.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora cyanea
NA-134]
Length = 781
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 214/340 (62%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 95 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQLTDEFGEKVAQLVD 154
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 155 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 206
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 207 EKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDTY 266
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L + L++ IS V GR K YSIH KM+ + +D+IHD+ G+R++V+
Sbjct: 267 LRWVIGELTRQLEESRISAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVDEVR 325
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDY+ +P++ YQSLHT V G PLEVQIRT EMH A
Sbjct: 326 DCYAAMGVVHALWQPMPGRFKDYVAQPRYGVYQSLHTTVIGPDGKPLEVQIRTHEMHRTA 385
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 386 EYGIAAHWRYKETKGTHRGNAVDVDEMAWMRQLLDWQREA 425
>gi|320161070|ref|YP_004174294.1| GTP pyrophosphokinase [Anaerolinea thermophila UNI-1]
gi|319994923|dbj|BAJ63694.1| GTP pyrophosphokinase [Anaerolinea thermophila UNI-1]
Length = 733
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 211/354 (59%), Gaps = 21/354 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ HC A +LA I T+V AGLLHDT++D ++ + I R FG +A LV+
Sbjct: 38 RLSGEPYITHCEAVAAILADIRVPPTLVIAGLLHDTVEDTPITLEDIRREFGDEIAKLVD 97
Query: 62 GVSKLSQLSKLARENNTAS-----------------KTVEADRLHTMFLAMA-DARAVLI 103
GV+KL+ L +++R++ AS K + + L FLAM D R VLI
Sbjct: 98 GVTKLTHLPRVSRDDQYASEVEEYGLALETTEDTRRKQLAQETLRKTFLAMGEDIRVVLI 157
Query: 104 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 163
KLADRLHNM TL +P KR+R A+ETL+IF PLANRLGI K +LE+L F+++NP+++
Sbjct: 158 KLADRLHNMRTLGYMPENKRRRIAQETLDIFAPLANRLGIWQIKWELEDLAFRYVNPEKY 217
Query: 164 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 221
E++ L + E + I +L L+ I + GR K +YSI+ KM++K +
Sbjct: 218 KEIAELLAQKRADREKQIQEIISRLRTILEQAGIQAEI-TGRPKHIYSIYKKMVEKSRSF 276
Query: 222 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 281
D + D+ G+RLIV +DCY AL ++H W +P + DYI PK N YQSLHT V +
Sbjct: 277 DSLMDLRGVRLIVPTTQDCYAALGIIHTHWRPIPHEFDDYIAAPKDNNYQSLHTAVIYDD 336
Query: 282 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
PLEVQIRT EM AE+G AAHWRYKE + Q V R ++ W+ E
Sbjct: 337 GKPLEVQIRTPEMDQNAEYGIAAHWRYKEKHGKLEEDYEQRVNLLRRLMDWRQE 390
>gi|30264477|ref|NP_846854.1| GTP pyrophosphokinase [Bacillus anthracis str. Ames]
gi|30259135|gb|AAP28340.1| GTP diphosphokinase [Bacillus anthracis str. Ames]
Length = 727
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 248/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGVLVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R +
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRV------Y 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 451
>gi|390934796|ref|YP_006392301.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570297|gb|AFK86702.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 718
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 212/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE AM+LA + + + +A+GLLHD ++D ++Y+ I FG +ADLV+
Sbjct: 38 RNSGEPYIVHPVEVAMILADLELDVSTIASGLLHDVIEDTSITYEDIKNEFGQEIADLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL + ++ +A+ + M +AMA D R ++IKLADRLHNM TL L
Sbjct: 98 GVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIMIKLADRLHNMRTLKFLSE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD++ L K+ + E
Sbjct: 152 EKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDEYYSLVEKVAKKRKEREES 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IEKL++ L + I V GR K YSI+ KM ++ T ++I+D+ +R+IV +
Sbjct: 212 IKELIEKLKEKLNEIGIKADV-DGRPKHFYSIYKKMKQQNKTFEQIYDLMAVRVIVNTVK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VVH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT +MH A
Sbjct: 271 DCYGTLGVVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWDMHRTA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKEG F ++ W R +L WQ E
Sbjct: 331 EYGIAAHWKYKEGKSYEDEFDAKL-SWLRQLLEWQRE 366
>gi|282899912|ref|ZP_06307873.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Cylindrospermopsis raciborskii CS-505]
gi|281195182|gb|EFA70118.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Cylindrospermopsis raciborskii CS-505]
Length = 756
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/339 (44%), Positives = 209/339 (61%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G ++T++AAG LHD ++D ++ + I + FG V LVE
Sbjct: 59 RKSGEPYIAHPIAVADLLRDLGCSATMIAAGFLHDVVEDTEVTIEDIEQKFGHEVRQLVE 118
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ N T+ +A+ MFL+MA D R +++KLADRLHNM TL +
Sbjct: 119 GVTKLSKI------NFTSKTESQAENFRRMFLSMAQDIRVIVVKLADRLHNMRTLQYMSE 172
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
R+R A+ET +IF PLANRLGI K +LE+L FK+L PD + E+ + E E
Sbjct: 173 TSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPDAYREIQEHVAEKRTAREEK 232
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A E L + ++ I L + GR K LYSI+ KM +++ EI+D+ LR+IVE E
Sbjct: 233 LNKAKEVLRERIEQAGIKCLDISGRPKHLYSIYQKMQRQQKEFHEIYDLAALRIIVETNE 292
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 293 ECYRALAVVHDAFCPIPGRFKDYIGLPKPNRYQSLHTCVIGLTGRPLEVQIRTMEMHHVA 352
Query: 299 EFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKE G + + W R +L WQ +
Sbjct: 353 EYGIAAHWKYKETGGSTAQVTGTDEKFAWLRQLLDWQSD 391
>gi|220907977|ref|YP_002483288.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7425]
gi|219864588|gb|ACL44927.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7425]
Length = 748
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/338 (45%), Positives = 210/338 (62%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ H V A LL +G ++ +VAAG LHD ++D ++ + + FG V LVE
Sbjct: 56 RASGEPYIAHPVAVAGLLRDLGGSAAMVAAGFLHDVIEDTTVTPEQLEAEFGPEVRQLVE 115
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ N + +A+ MFLAMA D R + +KLADRLHNM TL+ LP
Sbjct: 116 GVTKLSKI-------NFSKTERQAESFRRMFLAMAQDIRVIFVKLADRLHNMRTLEYLPE 168
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
KR+R A+ET ++F PLANRLGI +K +LE+L FK+L P+ + + + E EA
Sbjct: 169 EKRRRIAQETRDVFAPLANRLGIWRFKWELEDLSFKYLEPEAYRRMQDLVAEKRGIREAQ 228
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AI L Q L+ N+ L GR K LYSI+ KM +++ EI+DI +R+IVE ++
Sbjct: 229 LEDAIAILRQQLQPLNLKRCDLSGRPKHLYSIYQKMERQQKEFHEIYDIAAIRVIVETKD 288
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L +VH + VP + KDYI PK N YQSLHTVV +G PLEVQIRT EMH A
Sbjct: 289 ECYRVLAIVHDCFKPVPNRFKDYIGLPKPNRYQSLHTVVIDQGGRPLEVQIRTMEMHRVA 348
Query: 299 EFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW+YKE QH + + W R +L Q
Sbjct: 349 EYGIAAHWKYKEVGHSLGQHLTTADEKFVWLRQLLDTQ 386
>gi|384565591|ref|ZP_10012695.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora glauca
K62]
gi|384521445|gb|EIE98640.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora glauca
K62]
Length = 781
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 214/340 (62%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 95 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQLTEDFGEKVAQLVD 154
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 155 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 206
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 207 EKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDTY 266
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L + L++ I+ V GR K YSIH KM+ + +D+IHD+ G+R++V+
Sbjct: 267 LRWVIGELTKQLEESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVDEVR 325
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDYI +P++ YQSLHT V G PLEVQIRT EMH A
Sbjct: 326 DCYAAMGVVHALWQPMPGRFKDYIAQPRYGVYQSLHTTVIGPDGKPLEVQIRTHEMHRTA 385
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 386 EYGIAAHWRYKETKGTHRGNAVDIDEMAWMRQLLDWQREA 425
>gi|440780767|ref|ZP_20959238.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
pasteurianum DSM 525]
gi|440221355|gb|ELP60560.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
pasteurianum DSM 525]
Length = 736
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 214/350 (61%), Gaps = 21/350 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H E A +LA +G + +AAGLLHD ++D +++ + R F VA+LVE
Sbjct: 37 RESGEPYIIHPEEVACILAEMGMDQNTIAAGLLHDVIEDTEYTHEDLTREFNGEVANLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++S +E +AD + M LAMA D R +LIKL+DRLHNM TL +
Sbjct: 97 GVTKLGKISYKTKEEQ------QADNVRKMLLAMAKDIRVILIKLSDRLHNMRTLKYMSA 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ AKETL+IF PLA+RLGIS K +LE+L F+++ P+++ EL + E E
Sbjct: 151 SKQKEKAKETLDIFAPLAHRLGISKIKWELEDLAFRYIKPNEYYELVDDIAEKRVEREEY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L + L+D NI + GR K YSI+ KM+ K T+D+I D+ +R++V +
Sbjct: 211 IRGIISELYKNLEDANI-MADIDGRPKHFYSIYRKMVNKNKTLDQIFDLTAIRILVNDIR 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY L +VH ++ +PG+ KDYI PK N YQSLH+ V G E+QIRT EMH A
Sbjct: 270 ECYTVLGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKSFEIQIRTYEMHKTA 329
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWARWVLTWQCEAMS 338
E+G AAHW+YKEG + + + F ++ W R +L WQ E +
Sbjct: 330 EYGIAAHWKYKEGIVEGTDNKGVEIEKADFDTKLT-WVREMLDWQKETTN 378
>gi|331002004|ref|ZP_08325524.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411800|gb|EGG91205.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 762
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 219/339 (64%), Gaps = 15/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D +S++ + FG VA+LV+
Sbjct: 65 RKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAISFEELSDMFGVDVANLVD 124
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QLS +N+ ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 125 GVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKP 179
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD + +LS KL + +
Sbjct: 180 EKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQF 239
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I+K+ + L I + + GR K L+SI+ KM+ + T+D+I+D++ +R+IVE+
Sbjct: 240 VDEIIKKINEHLSVTGIKYQI-NGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVA 298
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY AL VH+++ +PG+ KDYI PK N YQSLHT + + P EVQIRT EMH A
Sbjct: 299 ACYLALGTVHEIYKPIPGRFKDYIAMPKQNMYQSLHTTLISDTGQPFEVQIRTYEMHKTA 358
Query: 299 EFGFAAHWRYKE----GDCQHSSFVLQMVEWARWVLTWQ 333
EFG AAHW+YKE + Q S + W R +L WQ
Sbjct: 359 EFGIAAHWKYKETGSSSEAQGSEDA--KMNWLRQILEWQ 395
>gi|312135681|ref|YP_004003019.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor owensensis
OL]
gi|311775732|gb|ADQ05219.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor owensensis
OL]
Length = 726
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 217/340 (63%), Gaps = 16/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY++H +E A++LA + + + AGLLHD ++D S + I R FG +A+LV+
Sbjct: 44 RSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSASLEDIEREFGKEIAELVD 103
Query: 62 GVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDA 117
GV+KL +L SKL R+ A+ M +AMA D R +LIKLADRLHNM TL
Sbjct: 104 GVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIRVILIKLADRLHNMRTLKY 154
Query: 118 LPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFD 175
LP K+++ A+ET+EI+ PLA+RLGIS K +LE+L ++L+P+ + +L K+ +
Sbjct: 155 LPPEKQRQKAQETIEIYAPLAHRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVER 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + I + + LK+ NI + GR K YSI+ KM ++ T++EI+D++ +R+IV
Sbjct: 215 EEYIKRIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIVN 274
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V G P EVQIRT +MH
Sbjct: 275 SVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPFEVQIRTFDMH 334
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 335 RTAEYGIAAHWKYKEGRVK-STDEDEKFAWLRELLEWQKE 373
>gi|282897317|ref|ZP_06305319.1| GTP pyrophosphokinase [Raphidiopsis brookii D9]
gi|281197969|gb|EFA72863.1| GTP pyrophosphokinase [Raphidiopsis brookii D9]
Length = 756
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/339 (44%), Positives = 208/339 (61%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G N+ ++AAG LHD ++D ++ + I + FG V LVE
Sbjct: 59 RKSGEPYIAHPVAVADLLKDLGGNAPMIAAGFLHDVVEDTEVTIEEIEQKFGHEVRQLVE 118
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ N T+ +A+ MFL+MA D R +++KLADRLHNM TL +
Sbjct: 119 GVTKLSKI------NFTSKTESQAENFRRMFLSMAQDIRVIVVKLADRLHNMRTLQYMSE 172
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
R+R A+ET +IF PLANRLGI K +LE+L FK+L PD + E+ + E E
Sbjct: 173 TSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPDAYREIQEHVAEKRTAREEK 232
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A E L + ++ I L + GR K LYSI+ KM +++ EI+D+ LR+IVE E
Sbjct: 233 LNKAKEVLRERIEQAGIKCLDISGRPKHLYSIYQKMQRQQKEFHEIYDLAALRIIVETNE 292
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 293 ECYRALAVVHDAFCPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRPLEVQIRTMEMHQVA 352
Query: 299 EFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKE G ++ + W +L WQ +
Sbjct: 353 EYGIAAHWKYKETGGSTAQATGTDEKFAWLGQLLDWQSD 391
>gi|150016418|ref|YP_001308672.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium beijerinckii NCIMB
8052]
gi|149902883|gb|ABR33716.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium beijerinckii NCIMB
8052]
Length = 738
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 213/344 (61%), Gaps = 14/344 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +LA +G ++ + AGLLHD ++D SYD F A +A+LVE
Sbjct: 37 RESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTEFSYDETVSLFNAEIANLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L ++ + +AD + M LAMA D R ++IKLADRLHNM TL +P
Sbjct: 97 GVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPA 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ ++ EL + E E
Sbjct: 154 KKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKEYYELVDSIAEKRVERETY 213
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + L+Q L + I + GR K YSI+ KM+ K ++++I D+ +R++V + +
Sbjct: 214 INDIVNDLKQKLGNSGIESDI-DGRPKHFYSIYKKMVSKNKSIEQIFDLTAIRVLVHSVK 272
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EMH A
Sbjct: 273 DCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGKTFEIQIRTFEMHKTA 332
Query: 299 EFGFAAHWRYKEGDC------QHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEGD + F ++V W R +L WQ E
Sbjct: 333 EYGIAAHWKYKEGDNAKGEQDKQKDFEKKLV-WLRDMLEWQKET 375
>gi|253682203|ref|ZP_04863000.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
gi|253561915|gb|EES91367.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
Length = 730
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/343 (42%), Positives = 215/343 (62%), Gaps = 19/343 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A +LA +G + +AA LLHD ++D +Y+ + + F VA+LVE
Sbjct: 37 RISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTDYTYEDVEKDFNIEVANLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +++ + M LAM D R +LIKLADRLHNM TL + +
Sbjct: 97 GVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVILIKLADRLHNMRTLKYMSV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC------F 174
K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+++ +L K+ E +
Sbjct: 151 EKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLNPNEYYDLVRKVAEKRKEREEY 210
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E ++ EKLE+A I GR K YSI+ KM+ K T+D+I D+ +R++V
Sbjct: 211 IERIIHELSEKLEEAGIKSEIE-----GRPKHFYSIYRKMVIKNKTIDQIFDLTAIRILV 265
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
E+ +DCY L +VH ++ +PG+ KDYI PK N YQSLH+ V G P E+QIRT EM
Sbjct: 266 EDVKDCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPFEIQIRTYEM 325
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQCEA 336
H +E+G AAHW+YKEG+ ++S + + W R VL WQ E
Sbjct: 326 HNTSEYGIAAHWKYKEGNLKNSDKDFEAKLAWLREVLEWQRET 368
>gi|375096049|ref|ZP_09742314.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora marina
XMU15]
gi|374656782|gb|EHR51615.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora marina
XMU15]
Length = 783
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 213/343 (62%), Gaps = 17/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 94 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLERLGSDFGEKVAQLVD 153
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 154 GVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPP 205
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 206 EKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVADRAPSRDTY 265
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L + L+ I+ V GR K YSIH KM+ + +D+IHD+ G+R++VE+
Sbjct: 266 LRWVIGELTKQLESSRINAKV-EGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEDVR 324
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 325 DCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTHEMHRTA 384
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
E+G AAHWRYKE H V+ W R +L WQ EA
Sbjct: 385 EYGIAAHWRYKESRGTHGHNPANAVDIDEMAWMRQLLDWQREA 427
>gi|301055915|ref|YP_003794126.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
gi|300378084|gb|ADK06988.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
Length = 727
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNEKMVT-LDYKLKTGDIIEI 451
>gi|33239669|ref|NP_874611.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237194|gb|AAP99263.1| GTP pyrophosphokinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 776
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 208/345 (60%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A LL IGA+ TV+AAG LHD ++D ++ + FG+ V LV
Sbjct: 84 FRVSGDPYISHPIAVADLLRDIGASPTVIAAGFLHDVVEDTSITLPELEAYFGSEVRGLV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + + T +A+ L MFLAMA D R VL+KLADRLHNM T++ L
Sbjct: 144 EGVTKLGGI------HFTNRTEAQAENLRKMFLAMARDIRVVLVKLADRLHNMRTIEVLQ 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+QR A ET EI+ PLANRLGI +K +LE+L FK L P+ + ++ ++ E
Sbjct: 198 PAKQQRIALETREIYAPLANRLGIGRFKWELEDLAFKLLEPESYKKIQQEVATKRSEREK 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ IE L+ L + ++ + GR K L+ I KM K+ EI+D+ LR+IV N
Sbjct: 258 RLHLTIELLKNRLINAGLNDCNIDGRPKHLFGIWSKMEKQDKEFHEIYDVAALRIIVPNL 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT+EMH
Sbjct: 318 ETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTQEMHQV 376
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
AEFG AAHW+YKEG S + W R ++ WQ E S D +
Sbjct: 377 AEFGIAAHWKYKEGGSPASGNT-ERFNWLRQLVDWQQEEGSSDHN 420
>gi|23099479|ref|NP_692945.1| GTP pyrophosphokinase [Oceanobacillus iheyensis HTE831]
gi|22777708|dbj|BAC13980.1| GTP pyrophosphokinase (stringent response) [Oceanobacillus
iheyensis HTE831]
Length = 734
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/341 (43%), Positives = 213/341 (62%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H V+ A +LA + +S ++AG LHD ++D ++ + + F +A LV
Sbjct: 43 FRKSGEPYIIHPVQVAGILADLQMDSETISAGFLHDVVEDTDVTVEQLEEAFNHEIAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +E +A+ MF+AMA D R ++IKLADRLHNM TL L
Sbjct: 103 DGVTKLGKIRYETKEAQ------QAENHRKMFVAMAKDIRVIMIKLADRLHNMRTLKHLA 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + + +E +
Sbjct: 157 PEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKREERES 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I++L L NI + GR K LYSI+ KM+K+K +EI+D+ +R++VEN
Sbjct: 217 YIQEVIDELALELDTVNIE-AEMSGRPKHLYSIYQKMVKQKKQFNEIYDLLAVRILVENI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH
Sbjct: 276 KDCYAVLGIIHTNWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPKGDPLEVQIRTKEMHDI 335
Query: 298 AEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG + SSF + + W R +L WQ E
Sbjct: 336 AEYGIAAHWAYKEGKTSREKSSFE-EKLSWFREILEWQSET 375
>gi|390437740|ref|ZP_10226267.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis sp. T1-4]
gi|389838856|emb|CCI30391.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis sp. T1-4]
Length = 765
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 210/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEARFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLT 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + ++ S K ++
Sbjct: 179 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRQVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E+ + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 ESRIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L VVH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE H++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSHTTLTAADEKFAWLRNLLDWQ 396
>gi|118444430|ref|YP_877917.1| GTP pyrophosphokinase [Clostridium novyi NT]
gi|118134886|gb|ABK61930.1| GTP pyrophosphokinase [Clostridium novyi NT]
Length = 729
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 211/338 (62%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A +LA +G + +AA LLHD ++D +Y+ + + F VA+LVE
Sbjct: 37 RISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTDYTYEDVEKEFNREVANLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +++ + M LAM D R +LIKLADRLHNM TL + +
Sbjct: 97 GVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVILIKLADRLHNMRTLKYMTV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+++ +L K+ E E
Sbjct: 151 EKQKEKAKETLDIYAPLAHRLGISKVKWELEDLALRYLNPNEYYDLVRKVAEKRKEREEY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +L++ L + I + GR K YSI+ KM+ K T+D+I D+ +R++VE+ +
Sbjct: 211 IERIIHELKEKLDEAGIKSEI-EGRPKHFYSIYRKMVVKNKTIDQIFDLTAVRILVEDVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLH+ V G P E+QIRT EMH +
Sbjct: 270 DCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQGKPFEIQIRTYEMHYTS 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG S + W R VL WQ E
Sbjct: 330 EYGIAAHWKYKEGGKNSDSDFEAKLAWLREVLEWQRET 367
>gi|126695549|ref|YP_001090435.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9301]
gi|126542592|gb|ABO16834.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9301]
Length = 769
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/345 (45%), Positives = 212/345 (61%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D + I FG V LV
Sbjct: 78 FRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTGIDLSEIETNFGLEVKILV 137
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + NN +A+ L MFLAMA D R VL+KLADRLHNM T++ L
Sbjct: 138 EGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVVLVKLADRLHNMRTIEWLN 191
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EA 177
K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P ++ +L ++ V+ D E
Sbjct: 192 DEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPKEYLDLKDQIAVKRSDREK 251
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +++ L + + GR K LY I KM +++ EI+D+ LR+IV+N
Sbjct: 252 RLKVTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQKHFHEIYDVAALRIIVDNS 311
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT MH
Sbjct: 312 DSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGYQSLHTSVIGRHR-PIEVQIRTTSMHQI 370
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
AE+G AAHW+YKEG S + W R ++ WQ E +D +
Sbjct: 371 AEYGIAAHWQYKEGGSPAKSNA-ERFNWLRQLVEWQQEGNERDHN 414
>gi|425440615|ref|ZP_18820913.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9717]
gi|389718904|emb|CCH97199.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9717]
Length = 765
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 209/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEARFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLT 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + + S K ++
Sbjct: 179 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRTVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 EARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L +VH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE H++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSHTTLTAEDEKFAWLRNLLDWQ 396
>gi|168204879|ref|ZP_02630884.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|422346604|ref|ZP_16427518.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|422874854|ref|ZP_16921339.1| GTP pyrophosphokinase [Clostridium perfringens F262]
gi|170663656|gb|EDT16339.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|373226149|gb|EHP48476.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|380304188|gb|EIA16478.1| GTP pyrophosphokinase [Clostridium perfringens F262]
Length = 726
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 218/343 (63%), Gaps = 15/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + AM+LA +G ++ + AGLLHD ++D +Y+ I F VA+LV+
Sbjct: 37 RESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +AD + M LAMA D R ++IKLADRLHNM TL +
Sbjct: 97 GVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKP 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P+++ +L + + E E
Sbjct: 151 EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKF 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ IE+L++ L NI + GR K YSI+ KM+ K ++++I D+ +R++V +
Sbjct: 211 ISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRILVNTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EMH A
Sbjct: 270 DCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKTFEIQIRTFEMHRTA 329
Query: 299 EFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEAM 337
E+G AAHW+YK G D + +F ++ W R +L WQ EA+
Sbjct: 330 EYGIAAHWKYKSGVTGTDSKDMTFENKLT-WLRDILEWQKEAV 371
>gi|56421113|ref|YP_148431.1| GTP pyrophosphokinase [Geobacillus kaustophilus HTA426]
gi|375009672|ref|YP_004983305.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56380955|dbj|BAD76863.1| GTP pyrophosphokinase (ppGpp synthetase) [Geobacillus kaustophilus
HTA426]
gi|359288521|gb|AEV20205.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 732
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 210/339 (61%), Gaps = 10/339 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + ++T +AAG LHD ++D + + + R FGA VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHDVIEDTEATKEDLEREFGAEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MFLAMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 157 AEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ + L + +I + GR K +YSI+ KM+ + +EI+D+ +R+IV +
Sbjct: 217 YLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTFEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 336 AEFGIAAHWAYKEGKTIKPNSFEEKLSWFREILEWQNDA 374
>gi|182624408|ref|ZP_02952192.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
gi|177910411|gb|EDT72788.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
Length = 726
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 218/343 (63%), Gaps = 15/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + AM+LA +G ++ + AGLLHD ++D +Y+ I F VA+LV+
Sbjct: 37 RESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +AD + M LAMA D R ++IKLADRLHNM TL +
Sbjct: 97 GVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKP 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P+++ +L + + E E
Sbjct: 151 EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKF 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ IE+L++ L NI + GR K YSI+ KM+ K ++++I D+ +R++V +
Sbjct: 211 ISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRILVNTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EMH A
Sbjct: 270 DCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKTFEIQIRTFEMHRTA 329
Query: 299 EFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEAM 337
E+G AAHW+YK G D + +F ++ W R +L WQ EA+
Sbjct: 330 EYGIAAHWKYKSGVTGTDSKDMTFENKLT-WLRDILEWQKEAV 371
>gi|110798612|ref|YP_696617.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
gi|110673259|gb|ABG82246.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
Length = 726
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 218/343 (63%), Gaps = 15/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + AM+LA +G ++ + AGLLHD ++D +Y+ I F VA+LV+
Sbjct: 37 RESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +AD + M LAMA D R ++IKLADRLHNM TL +
Sbjct: 97 GVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKP 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P+++ +L + + E E
Sbjct: 151 EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKF 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ IE+L++ L NI + GR K YSI+ KM+ K ++++I D+ +R++V +
Sbjct: 211 ISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRILVNTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EMH A
Sbjct: 270 DCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKTFEIQIRTFEMHRTA 329
Query: 299 EFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEAM 337
E+G AAHW+YK G D + +F ++ W R +L WQ EA+
Sbjct: 330 EYGIAAHWKYKSGVTGTDSKDMTFENKLT-WLRDILEWQKEAV 371
>gi|284928658|ref|YP_003421180.1| (p)ppGpp synthetase, RelA/SpoT family [cyanobacterium UCYN-A]
gi|284809117|gb|ADB94822.1| (p)ppGpp synthetase, RelA/SpoT family [cyanobacterium UCYN-A]
Length = 745
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 238/425 (56%), Gaps = 29/425 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H V A +L +G + +++AAG LHD ++D ++ D I FG V LVE
Sbjct: 55 RKSGEPYIVHPVTVAGILRDLGGDKSMIAAGFLHDVVEDTDITADNIEEMFGQEVRLLVE 114
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N ++KT +A+ MFLAMA D R +++KLADRLHNM TLDAL
Sbjct: 115 GVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLDALK 167
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A ET EIF PLANRLGI K +LE+L FK+L + + E+ + E EA
Sbjct: 168 PEKQKRIALETKEIFSPLANRLGIWRVKWELEDLSFKYLETNAYWEIQGLVAEKRIDREA 227
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + L++ L I L L GR K LY I+ KM + EI+D+ LR+IV+N+
Sbjct: 228 RIENVKNILQKRLNSIGIQVLELQGRSKHLYGIYYKMHSQNKGFHEIYDLAALRIIVQNK 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 288 EECYRALAVVHDTFKPMPGRFKDYIGLPKPNRYQSLHTTVVGFNGRPLEIQIRTLEMHHI 347
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDRSCVGNGDSIKPPC 354
AE+G AAHW+YKE H + + Q E W R +L WQ + D++
Sbjct: 348 AEYGIAAHWKYKETGVSHYTQLSQEDEKFTWLRQLLDWQKDLKDAQEYVDNLKDNL---- 403
Query: 355 TFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSP 414
DD + + P DG VI + +V T + + R + +WS
Sbjct: 404 -----FDDDVYVFTP----DGD--VIALARGATTVDFAYRIHTEVGNHMKGARINGKWSV 452
Query: 415 YGFPL 419
+G PL
Sbjct: 453 FGQPL 457
>gi|168214142|ref|ZP_02639767.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|168215563|ref|ZP_02641188.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
gi|170714350|gb|EDT26532.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|182382330|gb|EDT79809.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
Length = 726
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 218/343 (63%), Gaps = 15/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + AM+LA +G ++ + AGLLHD ++D +Y+ I F VA+LV+
Sbjct: 37 RESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +AD + M LAMA D R ++IKLADRLHNM TL +
Sbjct: 97 GVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKP 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P+++ +L + + E E
Sbjct: 151 EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKF 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ IE+L++ L NI + GR K YSI+ KM+ K ++++I D+ +R++V +
Sbjct: 211 ISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRILVNTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EMH A
Sbjct: 270 DCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKTFEIQIRTFEMHRTA 329
Query: 299 EFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEAM 337
E+G AAHW+YK G D + +F ++ W R +L WQ EA+
Sbjct: 330 EYGIAAHWKYKSGVTGTDSKDMTFENKLT-WLRDILEWQKEAV 371
>gi|168208638|ref|ZP_02634263.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
gi|170712986|gb|EDT25168.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
Length = 726
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 218/343 (63%), Gaps = 15/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + AM+LA +G ++ + AGLLHD ++D +Y+ I F VA+LV+
Sbjct: 37 RESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +AD + M LAMA D R ++IKLADRLHNM TL +
Sbjct: 97 GVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKP 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P+++ +L + + E E
Sbjct: 151 EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKF 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ IE+L++ L NI + GR K YSI+ KM+ K ++++I D+ +R++V +
Sbjct: 211 ISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRILVNTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EMH A
Sbjct: 270 DCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKTFEIQIRTFEMHRTA 329
Query: 299 EFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEAM 337
E+G AAHW+YK G D + +F ++ W R +L WQ EA+
Sbjct: 330 EYGIAAHWKYKSGVTGTDSKDMTFENKLT-WLRDILEWQKEAV 371
>gi|326201899|ref|ZP_08191769.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
2782]
gi|325987694|gb|EGD48520.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
2782]
Length = 726
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 210/335 (62%), Gaps = 10/335 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A++LA I + T + A LLHDT++D +YD + FG VA+LV+
Sbjct: 40 RISGEPYIIHPVEVAIILAEIELDCTALVAALLHDTIEDTTCTYDQLKAQFGQEVAELVD 99
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E + + L MFLAMA D R ++IKLADRLHNM TL+ +
Sbjct: 100 GVTKLGKIPFTTKEEQ------QVENLRKMFLAMAKDIRVIMIKLADRLHNMRTLNYMTQ 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ A+ETLEI+ PLA+RLGIS K +LE++C ++L+P + +L K+ EA
Sbjct: 154 DKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLDPKGYYDLVEKINTKRKQREAY 213
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+T I+ L + + I + GR K YSI+ KM+K+ T+D+I+D++ R+IV + +
Sbjct: 214 ITIIIDTLREKTNELRIENAQIDGRPKHFYSIYRKMVKQNKTLDQIYDLFAFRIIVNSVK 273
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH+L+ +PG+ KDYI PK N YQSLHT + G P EVQIRT +MH A
Sbjct: 274 DCYAVLGLVHELYKPMPGRFKDYIAMPKPNMYQSLHTTLIGPEGQPFEVQIRTWDMHRVA 333
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E G AAHW+YKEG ++ W R +L WQ
Sbjct: 334 EVGIAAHWKYKEG-INNAKDSDNKFAWLRQLLEWQ 367
>gi|359412257|ref|ZP_09204722.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
gi|357171141|gb|EHI99315.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
Length = 736
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 215/348 (61%), Gaps = 22/348 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +LA +G ++ + AGLLHD ++D SYD F A +ADLV+
Sbjct: 37 RESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTDCSYDETVNLFNAEIADLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L ++ + +AD + M LAMA D R ++IKLADRLHNM TL +P
Sbjct: 97 GVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPE 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE------CF 174
K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ ++ EL + E +
Sbjct: 154 KKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKEYYELVDSIAEKRVERETY 213
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
+ +V+ EKLE A +I GR K YSI+ KM+ K ++++I D+ +R++V
Sbjct: 214 IKDIVSDLEEKLEAAGIQSDID-----GRPKHFYSIYKKMVSKNKSIEQIFDLTAIRVLV 268
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EM
Sbjct: 269 NSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGKTFEIQIRTFEM 328
Query: 295 HLQAEFGFAAHWRYKEGDC------QHSSFVLQMVEWARWVLTWQCEA 336
H AE+G AAHW+YKEGD + F ++V W R +L WQ E
Sbjct: 329 HKTAEYGIAAHWKYKEGDTAKGEQDKQKDFEKKLV-WLRDMLEWQKET 375
>gi|225386906|ref|ZP_03756670.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
DSM 15981]
gi|225046918|gb|EEG57164.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
DSM 15981]
Length = 762
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 217/338 (64%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D +S D + + FG V+ LV+
Sbjct: 62 RKSGEPYIIHPLCVAIILADLEMDKETIEAGLLHDVVEDTAMSLDELAKQFGTEVSFLVD 121
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QLS + ++AD L MFLAMA D R ++IKLADRLHNM T
Sbjct: 122 GVTKLTQLSW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKP 176
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A+ET+EI+ P+A+RLGIS K++L++L K+L P+ + +L K+ D EA
Sbjct: 177 EKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKYLKPEVYYDLVEKVSLRKDAREAF 236
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +++++Q +KD I + GR K +SI+ KM+ + T+D+I+D++ +R++VE +
Sbjct: 237 VQEIVDEVKQHMKDAGIE-AAIGGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVETVK 295
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 296 DCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPFEIQIRTYEMHRTA 355
Query: 299 EFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW+YKE G SS ++ W R +L WQ
Sbjct: 356 EYGIAAHWKYKESGSGQVAASSEEAKL-SWLRQILEWQ 392
>gi|255280796|ref|ZP_05345351.1| GTP diphosphokinase [Bryantella formatexigens DSM 14469]
gi|255268733|gb|EET61938.1| RelA/SpoT family protein [Marvinbryantia formatexigens DSM 14469]
Length = 774
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 217/339 (64%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D ++ + I + FG V LV+
Sbjct: 73 RKSGEPYIIHPLCVAIILADLEMDKETITAGLLHDVVEDTVMTSEEIRQEFGEDVEQLVD 132
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL QLS +A K V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 133 GVTKLGQLS------YSADKIEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMS 186
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEA 177
K++ A+ET++I+ P+A RLGIS KV+L++L K+L PD + +L K L + E
Sbjct: 187 PEKQKEKARETMDIYAPIAQRLGISKIKVELDDLSLKYLQPDVYYDLVEKVALRKTEREK 246
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V ++++++ ++D I V GR K +SI+ KM+ + T+D+I+D++ +R+IV+
Sbjct: 247 FVQGIVDEVKKHIEDAGIRAQV-DGRVKHFFSIYKKMVNQDKTIDQIYDLFAVRIIVDTV 305
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 306 KDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGTPFEIQIRTFEMHKT 365
Query: 298 AEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHW+YKE G SS + + W R +L WQ
Sbjct: 366 AEYGIAAHWKYKEQSDGKKPDSSREEEKMTWLRQILEWQ 404
>gi|339629624|ref|YP_004721267.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|379007260|ref|YP_005256711.1| (p)ppGpp synthetase I SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
gi|339287413|gb|AEJ41524.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|361053522|gb|AEW05039.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
Length = 719
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 208/336 (61%), Gaps = 12/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ H + A +LA + ++ + A LLHD ++D + I FG VA LV+
Sbjct: 38 RASGEPYIAHPLAVAGILADLKMDTPTIVAALLHDVVEDTAYTLADIESRFGTEVAQLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L +E +A+ L MFLAMA D R +LIKLADRLHNM TL LP
Sbjct: 98 GVTKLDRLEVRTQEEE------QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKHLPQ 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
+ R AKET+EI+ PLA+RLGI K +LE+L F++L P + E+ + + E
Sbjct: 152 DRVTRIAKETMEIYAPLAHRLGIFRIKWELEDLAFQYLQPAAYQEMKELVAKKRQER--E 209
Query: 181 SAIEKLEQALKDK-NISFLV--LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+A++ + Q LKD+ + S +V + GR K LYSI+ KM K+ +I+D+ +R++VE+
Sbjct: 210 AAVDAVIQELKDRLDASGMVSEVSGRAKHLYSIYQKMHKQGKDFGQIYDLVAVRVLVESV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 270 KDCYAVLGLVHSLWKPVPGRFKDYIAMPKSNLYQSLHTTVIGPHGEPLEVQIRTFEMHHT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHWRYKEG + Q + W R +L WQ
Sbjct: 330 AEYGIAAHWRYKEGSSKADRDFEQKLSWLRQLLEWQ 365
>gi|423612609|ref|ZP_17588470.1| GTP pyrophosphokinase [Bacillus cereus VD107]
gi|401245334|gb|EJR51690.1| GTP pyrophosphokinase [Bacillus cereus VD107]
Length = 727
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 248/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMV-TLDYKLKTGDIIEI 451
>gi|261418406|ref|YP_003252088.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297529258|ref|YP_003670533.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. C56-T3]
gi|319767635|ref|YP_004133136.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC52]
gi|448238857|ref|YP_007402915.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
gi|261374863|gb|ACX77606.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297252510|gb|ADI25956.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. C56-T3]
gi|317112501|gb|ADU94993.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC52]
gi|445207699|gb|AGE23164.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
Length = 732
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 210/339 (61%), Gaps = 10/339 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + ++T +AAG LHD ++D + + + R FGA VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHDVIEDTEATKEDLEREFGAEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MFLAMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 157 AEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ + L + +I + GR K +YSI+ KM+ + +EI+D+ +R+IV +
Sbjct: 217 YLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTFEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 336 AEFGIAAHWAYKEGKTIKPNSFEEKLSWFREILEWQNDA 374
>gi|123967746|ref|YP_001008604.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. AS9601]
gi|123197856|gb|ABM69497.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. AS9601]
Length = 769
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/345 (45%), Positives = 212/345 (61%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D + I FG V LV
Sbjct: 78 FRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTGIDLSEIETNFGLEVKILV 137
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + NN +A+ L MFLAMA D R VL+KLADRLHNM T++ L
Sbjct: 138 EGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDFRVVLVKLADRLHNMRTIEWLN 191
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EA 177
K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P ++ +L ++ V+ D E
Sbjct: 192 DEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPKEYLDLKDQIAVKRSDREK 251
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +++ L + + GR K LY I KM +++ EI+D+ LR+IV+N
Sbjct: 252 RLKVTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQKHFHEIYDVAALRIIVDNS 311
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT MH
Sbjct: 312 DSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGYQSLHTSVIGRHR-PIEVQIRTTSMHQI 370
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
AE+G AAHW+YKEG S + W R ++ WQ E +D +
Sbjct: 371 AEYGIAAHWQYKEGGSPAKSNA-ERFNWLRQLVEWQQEGNERDHN 414
>gi|52141100|ref|YP_085730.1| GTP diphosphokinase [Bacillus cereus E33L]
gi|51974569|gb|AAU16119.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus E33L]
Length = 727
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 451
>gi|312127055|ref|YP_003991929.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
hydrothermalis 108]
gi|311777074|gb|ADQ06560.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
hydrothermalis 108]
Length = 722
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 216/340 (63%), Gaps = 16/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H +E A++LA + + + AGLLHD ++D S + + R FG +ADLV+
Sbjct: 40 RNSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSASLEDVEREFGKEIADLVD 99
Query: 62 GVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDA 117
GV+KL +L SKL R+ A+ M +AMA D R +LIKLADRLHNM TL
Sbjct: 100 GVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIRVILIKLADRLHNMRTLKY 150
Query: 118 LPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFD 175
LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+P+ + +L K+ +
Sbjct: 151 LPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVER 210
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + I + + LK+ NI + GR K YSI+ KM ++ T++EI+D++ +R+IV
Sbjct: 211 EEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKQQGKTLEEIYDLFAIRIIVN 270
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V G P EVQIRT +MH
Sbjct: 271 SVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPFEVQIRTFDMH 330
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 331 RTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 369
>gi|348174215|ref|ZP_08881109.1| GTP pyrophosphokinase [Saccharopolyspora spinosa NRRL 18395]
Length = 772
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/344 (44%), Positives = 210/344 (61%), Gaps = 19/344 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + AGLLHDT++D S + + FG V LV+
Sbjct: 82 RKSGDPYITHPLAVATILAELGMDTTTLVAGLLHDTVEDTDYSLEKLGAEFGEEVGHLVD 141
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ A EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 142 GVTKLDKVKLGA--------AAEAETIRKMIIAMARDPRVLVIKLADRLHNMRTMRFLPP 193
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC---FDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ +LV +
Sbjct: 194 EKQARKARETLEVLAPLAHRLGMATIKWELEDLAFAILQPKKYDEIV-RLVANRAPSRDT 252
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I +L L ++ V GR K YSIH KM+ + D+IHD+ G+R++V+
Sbjct: 253 YLRTVIHELSHQLDTARLAAKV-EGRPKHYYSIHQKMIVRGRDFDDIHDLVGVRILVDEV 311
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT EMH
Sbjct: 312 RDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTHEMHRT 371
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
AE+G AAHWRYKE ++ S V VE W R +L WQ EA
Sbjct: 372 AEYGIAAHWRYKETKGRNGSGVQSAVEVDEMAWMRQLLDWQREA 415
>gi|331697364|ref|YP_004333603.1| (p)ppGpp synthetase I SpoT/RelA [Pseudonocardia dioxanivorans
CB1190]
gi|326952053|gb|AEA25750.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudonocardia dioxanivorans
CB1190]
Length = 821
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 216/343 (62%), Gaps = 18/343 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 128 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSLERLRTDFGDEVAHLVD 187
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E TA+ EA+ + M +AMA D R ++IKL+DRLHNM T+ LP
Sbjct: 188 GVTKLDKV-----EFGTAA---EAETIRKMVVAMARDPRVLVIKLSDRLHNMRTMRFLPP 239
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC---FDEA 177
K+ + A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ +LV +
Sbjct: 240 EKQAKKARETLEVMAPLAHRLGMATVKWELEDLSFAILHPKKYEEIV-RLVATRAPSRDT 298
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ Q L+ I+ V GR K YSI+ KM+ K D+IHD+ G+R++V+
Sbjct: 299 YLKQVIDEVMQQLEGARITATV-EGRPKHYYSIYRKMIVKGRDFDDIHDLVGVRVLVDEV 357
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ +VH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT+EMH
Sbjct: 358 RDCYAAMGMVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTREMHRT 417
Query: 298 AEFGFAAHWRYKEGDCQHSSFV----LQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE H++ + + W R +L WQ EA
Sbjct: 418 AEFGIAAHWRYKESRGSHAATAGTVEIDEMSWMRQLLDWQREA 460
>gi|302670706|ref|YP_003830666.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
gi|302395179|gb|ADL34084.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
Length = 760
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/341 (43%), Positives = 220/341 (64%), Gaps = 10/341 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A++LA + + +AAGLLHD ++D + + I +FGA VA LV
Sbjct: 57 LRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTICTKEEIQESFGADVALLV 116
Query: 61 EGVSKLSQLSKLARENNTASK---TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLD 116
+GV+KL+ L +L+ +N ++ ++A L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 117 DGVTKLTAL-QLSTDNTNKTQEQIDMQAQNLRKMFLAMAKDIRVILIKLADRLHNMRTLA 175
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECF 174
+P K+QR A+ETL+I+ P+A RLGIS KV+L++L K+L PD + +L K + +
Sbjct: 176 HMPPEKQQRIAQETLDIYSPIAGRLGISRIKVELDDLSLKYLKPDVYYDLVDKVSIRKSE 235
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E V E + A+K I V GR K +SI+ KM + T+D+I+D++ +R+IV
Sbjct: 236 REKYVEDICENVRDAIKTAGIEGEV-NGRVKHFFSIYKKMRNQNKTLDQIYDLFAIRIIV 294
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G+ P E+QIRT +M
Sbjct: 295 ATVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGQTGQPFEIQIRTYDM 354
Query: 295 HLQAEFGFAAHWRYKE-GDCQHS-SFVLQMVEWARWVLTWQ 333
H AE+G AAHW+YKE D + + + + + W R +L WQ
Sbjct: 355 HKAAEYGIAAHWKYKETSDGKKAENGEEEKLTWLRQILEWQ 395
>gi|229186646|ref|ZP_04313807.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
gi|228596905|gb|EEK54564.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
Length = 727
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 451
>gi|47566596|ref|ZP_00237418.1| GTP pyrophosphokinase [Bacillus cereus G9241]
gi|118479564|ref|YP_896715.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
gi|196034529|ref|ZP_03101938.1| GTP diphosphokinase [Bacillus cereus W]
gi|196039332|ref|ZP_03106638.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
gi|196044908|ref|ZP_03112142.1| GTP diphosphokinase [Bacillus cereus 03BB108]
gi|206975952|ref|ZP_03236862.1| GTP diphosphokinase [Bacillus cereus H3081.97]
gi|217961898|ref|YP_002340468.1| GTP diphosphokinase [Bacillus cereus AH187]
gi|218905602|ref|YP_002453436.1| GTP diphosphokinase [Bacillus cereus AH820]
gi|222097852|ref|YP_002531909.1| gtp diphosphokinase (gtp pyrophosphokinase) [Bacillus cereus Q1]
gi|225866388|ref|YP_002751766.1| GTP diphosphokinase [Bacillus cereus 03BB102]
gi|228917043|ref|ZP_04080603.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929452|ref|ZP_04092473.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935727|ref|ZP_04098540.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948121|ref|ZP_04110405.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229093478|ref|ZP_04224581.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
gi|229123948|ref|ZP_04253140.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
gi|229141146|ref|ZP_04269687.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
gi|229158022|ref|ZP_04286093.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
gi|229198534|ref|ZP_04325238.1| GTP pyrophosphokinase [Bacillus cereus m1293]
gi|254724667|ref|ZP_05186450.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus anthracis
str. A1055]
gi|375286411|ref|YP_005106850.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
gi|376268304|ref|YP_005121016.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
gi|423354899|ref|ZP_17332524.1| GTP pyrophosphokinase [Bacillus cereus IS075]
gi|423373632|ref|ZP_17350971.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
gi|423549853|ref|ZP_17526180.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
gi|423570646|ref|ZP_17546891.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
gi|423573914|ref|ZP_17550033.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
gi|423603933|ref|ZP_17579826.1| GTP pyrophosphokinase [Bacillus cereus VD102]
gi|47556626|gb|EAL14958.1| GTP pyrophosphokinase [Bacillus cereus G9241]
gi|118418789|gb|ABK87208.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
gi|195993071|gb|EDX57030.1| GTP diphosphokinase [Bacillus cereus W]
gi|196024396|gb|EDX63069.1| GTP diphosphokinase [Bacillus cereus 03BB108]
gi|196029959|gb|EDX68560.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
gi|206745704|gb|EDZ57101.1| GTP diphosphokinase [Bacillus cereus H3081.97]
gi|217066579|gb|ACJ80829.1| GTP diphosphokinase [Bacillus cereus AH187]
gi|218537532|gb|ACK89930.1| GTP diphosphokinase [Bacillus cereus AH820]
gi|221241910|gb|ACM14620.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus Q1]
gi|225788454|gb|ACO28671.1| GTP diphosphokinase [Bacillus cereus 03BB102]
gi|228585037|gb|EEK43151.1| GTP pyrophosphokinase [Bacillus cereus m1293]
gi|228625475|gb|EEK82231.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
gi|228642309|gb|EEK98599.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
gi|228659250|gb|EEL14898.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
gi|228689949|gb|EEL43753.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
gi|228811479|gb|EEM57816.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228823965|gb|EEM69784.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830240|gb|EEM75856.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842650|gb|EEM87738.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|358354938|dbj|BAL20110.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
gi|364514104|gb|AEW57503.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
gi|401085783|gb|EJP94019.1| GTP pyrophosphokinase [Bacillus cereus IS075]
gi|401095836|gb|EJQ03889.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
gi|401189469|gb|EJQ96519.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
gi|401203557|gb|EJR10394.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
gi|401212483|gb|EJR19226.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
gi|401245619|gb|EJR51972.1| GTP pyrophosphokinase [Bacillus cereus VD102]
Length = 727
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 451
>gi|10443847|gb|AAG17607.1|AF242653_1 ppGpp synthetase/hydrolase Rel [Geobacillus stearothermophilus ATCC
7953]
Length = 732
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 210/339 (61%), Gaps = 10/339 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + ++T +AAG LHD ++D + + + R FGA VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHDVIEDTEATKEDLEREFGAEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MFLAMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 157 AEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ + L + +I + GR K +YSI+ KM+ + +EI+D+ +R+IV +
Sbjct: 217 YLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTFEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 336 AEFGIAAHWAYKEGKTIKPNSFEEKLSWFREILEWQNDA 374
>gi|172039304|ref|YP_001805805.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Cyanothece sp.
ATCC 51142]
gi|354552428|ref|ZP_08971736.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
gi|171700758|gb|ACB53739.1| probable guanosine-3',5'-bis(diphosphate) 3'-diphosphatase,
(ppGpp)ase [Cyanothece sp. ATCC 51142]
gi|353555750|gb|EHC25138.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
Length = 744
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 217/352 (61%), Gaps = 15/352 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +L +G + ++AAG LHD ++D ++ + I FG VA LVE
Sbjct: 55 RKSGEPYIAHPVAVAGILRDLGGDKAMIAAGFLHDVVEDTDVTVEEIEEMFGQEVALLVE 114
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N ++KT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 115 GVTKLSKF-------NFSNKTEQQAENFRRMFLAMARDIRVIVVKLADRLHNMRTLEPLR 167
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A+ET EIF PLANRLGI K +LE+L FK+L P+ + E+ + + E E
Sbjct: 168 PEKQKRIARETKEIFAPLANRLGIWRVKWELEDLSFKYLEPEDYREIQNFVSEKRIDRET 227
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + L++ L D I L L GR K LY I+ KM ++ EI+D+ LR+IV+
Sbjct: 228 RIETVKNILQKRLDDMGIQVLELQGRPKHLYGIYFKMQRQNKGFHEIYDLAALRIIVKTN 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH ++ +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 288 EECYRALAVVHDVFKPMPGRFKDYIGLPKPNRYQSLHTTVVGLNGRPLEIQIRTLEMHHI 347
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQCEAMSKDRSCVGN 346
AE+G AAHW+YKE G H+ F + W R +L WQ + + D+ V N
Sbjct: 348 AEYGIAAHWKYKETGGSNHTHFSNEDEKFTWLRQLLDWQKD-LKDDQEYVEN 398
>gi|423395299|ref|ZP_17372500.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
gi|423406174|ref|ZP_17383323.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
gi|401654710|gb|EJS72249.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
gi|401660168|gb|EJS77650.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
Length = 727
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 451
>gi|152976825|ref|YP_001376342.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus cytotoxicus NVH 391-98]
gi|152025577|gb|ABS23347.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus cytotoxicus NVH 391-98]
Length = 727
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 176/454 (38%), Positives = 248/454 (54%), Gaps = 55/454 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLHDVVEDTEVTLEDIEREFSKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGI+T K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGINTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M TS EKL + +IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TSIQEKLNEVSIHPDIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
MH AE+G AAHW YKEG + + + + W R +L WQ EA
Sbjct: 332 MHEIAEYGIAAHWAYKEGKAAATGTLEKKLTWFRQILEWQNEA----------------- 374
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWS 413
S+A++ S K D VFV + D V E P S +D R S
Sbjct: 375 ----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPMGSVPIDFAYRVH------S 420
Query: 414 PYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
G + + ++N K V KLK GD++E+
Sbjct: 421 EIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 450
>gi|305681298|ref|ZP_07404105.1| GTP diphosphokinase [Corynebacterium matruchotii ATCC 14266]
gi|305659503|gb|EFM49003.1| GTP diphosphokinase [Corynebacterium matruchotii ATCC 14266]
Length = 763
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/341 (43%), Positives = 213/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S D + FG VA LV
Sbjct: 73 FRKSGDPYITHPLAVATIAAEIGMDTTTIIASLLHDTVEDTEYSLDDLTNDFGEEVARLV 132
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 133 DGVTKLDKVALGA--------AAEAETIRKMVMAMAQDPRVLVIKVADRLHNMRTMRFLP 184
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TL++ PLA+RLG+S+ K +LE+L F L P ++ E+ + + +
Sbjct: 185 PEKQAKKARQTLDVIAPLAHRLGMSSVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDR 244
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I L+Q LK+ NI V GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 245 YLQEIISILQQGLKENNIDAEV-KGRPKHYWSIYQKMVMRGKDFDEIFDLVGIRILVDNL 303
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L+A +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH+
Sbjct: 304 NNCYAAIGVVHSLFAAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHVN 363
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE HS + + W R +L WQ EA
Sbjct: 364 AEYGIAAHWRYKETKGSHSGEQAEIDQMAWMRQLLDWQKEA 404
>gi|30022482|ref|NP_834113.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
gi|218232359|ref|YP_002369216.1| GTP diphosphokinase [Bacillus cereus B4264]
gi|218899576|ref|YP_002447987.1| GTP diphosphokinase [Bacillus cereus G9842]
gi|228902935|ref|ZP_04067076.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
gi|228910243|ref|ZP_04074061.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
gi|228941575|ref|ZP_04104123.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228960680|ref|ZP_04122324.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228967483|ref|ZP_04128511.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974504|ref|ZP_04135071.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981098|ref|ZP_04141399.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
gi|229048116|ref|ZP_04193687.1| GTP pyrophosphokinase [Bacillus cereus AH676]
gi|229111879|ref|ZP_04241425.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
gi|229129687|ref|ZP_04258655.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
gi|229146978|ref|ZP_04275340.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
gi|229152610|ref|ZP_04280799.1| GTP pyrophosphokinase [Bacillus cereus m1550]
gi|296504899|ref|YP_003666599.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
gi|384188479|ref|YP_005574375.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564115|ref|YP_006606839.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
gi|410676793|ref|YP_006929164.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
gi|423358556|ref|ZP_17336059.1| GTP pyrophosphokinase [Bacillus cereus VD022]
gi|423385906|ref|ZP_17363162.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
gi|423527737|ref|ZP_17504182.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
gi|423561125|ref|ZP_17537401.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
gi|423585115|ref|ZP_17561202.1| GTP pyrophosphokinase [Bacillus cereus VD045]
gi|423631131|ref|ZP_17606878.1| GTP pyrophosphokinase [Bacillus cereus VD154]
gi|423640514|ref|ZP_17616132.1| GTP pyrophosphokinase [Bacillus cereus VD166]
gi|423650270|ref|ZP_17625840.1| GTP pyrophosphokinase [Bacillus cereus VD169]
gi|423657360|ref|ZP_17632659.1| GTP pyrophosphokinase [Bacillus cereus VD200]
gi|434377574|ref|YP_006612218.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
gi|452200870|ref|YP_007480951.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|29898040|gb|AAP11314.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
gi|218160316|gb|ACK60308.1| GTP diphosphokinase [Bacillus cereus B4264]
gi|218543265|gb|ACK95659.1| GTP diphosphokinase [Bacillus cereus G9842]
gi|228630871|gb|EEK87511.1| GTP pyrophosphokinase [Bacillus cereus m1550]
gi|228636475|gb|EEK92943.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
gi|228653804|gb|EEL09674.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
gi|228671635|gb|EEL26933.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
gi|228723219|gb|EEL74593.1| GTP pyrophosphokinase [Bacillus cereus AH676]
gi|228778639|gb|EEM26905.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
gi|228785221|gb|EEM33233.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228792198|gb|EEM39772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228798986|gb|EEM45959.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228818082|gb|EEM64159.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228849407|gb|EEM94243.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
gi|228856719|gb|EEN01238.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
gi|296325951|gb|ADH08879.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
gi|326942188|gb|AEA18084.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401084428|gb|EJP92674.1| GTP pyrophosphokinase [Bacillus cereus VD022]
gi|401202179|gb|EJR09041.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
gi|401233758|gb|EJR40244.1| GTP pyrophosphokinase [Bacillus cereus VD045]
gi|401264498|gb|EJR70610.1| GTP pyrophosphokinase [Bacillus cereus VD154]
gi|401279575|gb|EJR85497.1| GTP pyrophosphokinase [Bacillus cereus VD166]
gi|401282688|gb|EJR88587.1| GTP pyrophosphokinase [Bacillus cereus VD169]
gi|401290103|gb|EJR95807.1| GTP pyrophosphokinase [Bacillus cereus VD200]
gi|401635962|gb|EJS53717.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
gi|401792767|gb|AFQ18806.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
gi|401876131|gb|AFQ28298.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
gi|402451400|gb|EJV83219.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
gi|409175922|gb|AFV20227.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
gi|452106263|gb|AGG03203.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 727
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMV-TLDYKLKTGDIIEI 451
>gi|49481489|ref|YP_038457.1| GTP diphosphokinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228987658|ref|ZP_04147772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|49333045|gb|AAT63691.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|228772118|gb|EEM20570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 727
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 451
>gi|428219731|ref|YP_007104196.1| (p)ppGpp synthetase I SpoT/RelA [Pseudanabaena sp. PCC 7367]
gi|427991513|gb|AFY71768.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena sp. PCC 7367]
Length = 746
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/341 (45%), Positives = 212/341 (62%), Gaps = 14/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANS-TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY+LH +E A +L +G S ++ AG LHD ++D ++ I FGA +A LV
Sbjct: 59 RASGEPYILHPIEVATILRDLGGGSKAMIVAGFLHDVVEDTEVTVADIEAEFGAEIAALV 118
Query: 61 EGVSKLSQLSKLARENNTASKTVEA-DRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
EGV+KLS+ N SKT A + MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 119 EGVTKLSKF-------NFESKTERAAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEHL 171
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--E 176
P K+ A+ET+EIF PLANRLGI K +LE+L FK+++ D + ++ S +VE E
Sbjct: 172 PAPKQANIARETMEIFAPLANRLGIGQIKWELEDLSFKYIDKDAYQQMRSLVVENRRNRE 231
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ + L ++ ++ + GR K LY I+ KM ++ +EI+D+ +R+IVEN
Sbjct: 232 ERLARVRDILRSRIEQLGLTNFEISGRPKHLYGIYQKMQVRQKKYEEIYDVSAIRIIVEN 291
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+E CY+ L VVH + +PG+ KDYI PK N YQSLHTVV G PLEVQIRT EMH
Sbjct: 292 KEACYRVLAVVHDCFRPIPGRFKDYIGLPKPNRYQSLHTVVIGPNGRPLEVQIRTWEMHH 351
Query: 297 QAEFGFAAHWRYKEGDCQH--SSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE + H +S + W R ++ WQ E
Sbjct: 352 IAEYGIAAHWKYKETNSSHQATSQEDEKFTWLRQLVEWQRE 392
>gi|354565208|ref|ZP_08984383.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
gi|353549167|gb|EHC18609.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
Length = 758
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 153/340 (45%), Positives = 210/340 (61%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +L +G ++ ++AAG LHD ++D ++ + I + FG+ V LVE
Sbjct: 61 RKSGEPYICHPIAVAGMLRDLGGSAAMIAAGFLHDVVEDTDVTIEEIEQRFGSEVRCLVE 120
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS++ N SKT +A+ MFLAMA D R +++KLADRLHNM TL+ +P
Sbjct: 121 GVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEYMP 173
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
KR+R A ET EIF PLANRLGI +K +LE+L FK+L P+ ++ + E E
Sbjct: 174 EEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFKYLEPEAFRQIQQLVSEKRTDREE 233
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E L L + I L + GR K LYSI+ KM ++ EI+D+ LR+IV+
Sbjct: 234 RLKKISETLRTRLAEAGIRCLDISGRPKHLYSIYQKMQRQNKEFHEIYDLAALRIIVQTN 293
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH ++ +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 294 EECYRALAVVHDVFRPIPGRFKDYIGLPKPNRYQSLHTGVIGPWGRPLEVQIRTMEMHHV 353
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
AE+G AAHW+YKE H+ + W R +L WQ +
Sbjct: 354 AEYGIAAHWKYKETGGSHTGLTASDEKFTWLRQLLEWQSD 393
>gi|228923159|ref|ZP_04086450.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|423582615|ref|ZP_17558726.1| GTP pyrophosphokinase [Bacillus cereus VD014]
gi|423634768|ref|ZP_17610421.1| GTP pyrophosphokinase [Bacillus cereus VD156]
gi|228836538|gb|EEM81888.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|401213494|gb|EJR20235.1| GTP pyrophosphokinase [Bacillus cereus VD014]
gi|401278754|gb|EJR84684.1| GTP pyrophosphokinase [Bacillus cereus VD156]
Length = 727
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 176/454 (38%), Positives = 248/454 (54%), Gaps = 54/454 (11%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV------ECF 174
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + + E +
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E ++T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++V
Sbjct: 218 LEEVMTGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEM
Sbjct: 273 NSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEM 332
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
H AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 333 HEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA----------------- 375
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWS 413
S+A++ S K D VFV + D V E P S +D R S
Sbjct: 376 ----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------S 421
Query: 414 PYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
G + + ++N K V KLK GD++E+
Sbjct: 422 EIG---NKTIGAKVNGKMV-TLDYKLKTGDIIEI 451
>gi|22298127|ref|NP_681374.1| GTP pyrophosphokinase [Thermosynechococcus elongatus BP-1]
gi|22294305|dbj|BAC08136.1| GTP pyrophosphokinase [Thermosynechococcus elongatus BP-1]
Length = 752
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 215/339 (63%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ H V A +L +G ++AAGLLHD ++D ++ + + FGA V LVE
Sbjct: 59 RASGEPYIAHPVAVASILRDLGGGPALLAAGLLHDVIEDTAVTAEELAANFGAEVRQLVE 118
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ LP
Sbjct: 119 GVTKLSKF-------NFSSKTERQAESFRRMFLAMAQDIRVIVVKLADRLHNMRTLEYLP 171
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
+R+ A+ET ++F PLANRLGI K +LE+L FK+L P+ + + + E EA
Sbjct: 172 EDRRRAIAQETRDVFAPLANRLGIWRIKWELEDLAFKYLEPEAYRRIQELVAEKRANREA 231
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ AI+ L++ L +L + GR K LYSI+ KM++++ EI+DI G+R++V +
Sbjct: 232 QLQQAIQILQERLSGMGFGYLEISGRPKHLYSIYQKMMRQQKEFHEIYDIAGIRILVATK 291
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+AL VVH + VPG+ KDYI+ PK N YQSLHTVV G G PLEVQIRT MH
Sbjct: 292 DECYRALAVVHDCFLSVPGRFKDYISLPKPNQYQSLHTVVIGLGGRPLEVQIRTLAMHHV 351
Query: 298 AEFGFAAHWRYKEGD---CQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHW+YKE Q S Q W R +L WQ
Sbjct: 352 SEYGIAAHWKYKETGHSLPQQWSVQDQKFTWLRQLLDWQ 390
>gi|302389921|ref|YP_003825742.1| (p)ppGpp synthetase I SpoT/RelA [Thermosediminibacter oceani DSM
16646]
gi|302200549|gb|ADL08119.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosediminibacter oceani DSM
16646]
Length = 721
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 208/335 (62%), Gaps = 12/335 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ ++ H +E AM+LA + ++ +AA LLHD ++D S + I + FG+ +A LV+
Sbjct: 39 RVSGELFIFHPLEVAMILADLELDTITIAASLLHDVVEDTNYSLEDIAKNFGSEIALLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+L +E +A+ L MFLAMA D R +LIKLADRLHNM TL LP
Sbjct: 99 GVTKLSKLEYKTKEEQ------QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYLPE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ A ETLEIF PLA+RLGIS K +LE+L F++L P+ + EL K+ + E
Sbjct: 153 KKQKEIAVETLEIFAPLAHRLGISKIKWELEDLAFRYLEPNHYYELVDKVAKKRREREEH 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + I L + L I + GR K YSI+ KM ++ + ++I D+ +R+IV+
Sbjct: 213 INNMIALLRERLTAAGIKAEI-QGRPKHFYSIYKKMKEQNKSFEQIFDLTAVRVIVDTVR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VVH LW +PG+ KDYI PK N YQSLHT V PLE+QIRT EMH A
Sbjct: 272 DCYAALGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIDSSGEPLEIQIRTYEMHKTA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG+ + + + W R +L WQ
Sbjct: 332 EYGIAAHWRYKEGNKEDD--FDKKLSWLREILDWQ 364
>gi|257064877|ref|YP_003144549.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
gi|256792530|gb|ACV23200.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
Length = 789
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 214/338 (63%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H VE A++LA + + + A LLHDT++D +++ + TF VA+LVE
Sbjct: 85 RKSGEPFIAHPVEVALILADLRMDVDTLCAALLHDTVEDTDVTHKDLLDTFNESVANLVE 144
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K++Q+ + + A+ + MF+AM+ D R ++IKLADRLHNM TL AL
Sbjct: 145 GVTKITQVEVESLTDEQAAT------IRKMFVAMSHDIRVIVIKLADRLHNMRTLSALRE 198
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
+R A ETLEI+ P+A+RLGI + K +LE+L F +L+P + +++ + E EA
Sbjct: 199 DRRIFKAHETLEIYAPIAHRLGIGSIKWELEDLSFYYLDPARFKQIAQMVAESRAQREAY 258
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ IE L + D NI + GR K LYSI+ KM+ ++ EI+D+ +R+IVE+ +
Sbjct: 259 LSRVIETLRDDVNDLNIKAHI-AGRPKHLYSINQKMINREKGFSEIYDLIAVRIIVESVK 317
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH LW +PG+ KDYI PK NGYQSLHT V G PLEVQIRT+EMH +
Sbjct: 318 DCYSVLGSVHSLWHPMPGRFKDYIAMPKANGYQSLHTTVIGPAGRPLEVQIRTEEMHRLS 377
Query: 299 EFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKE G+ + + + + W R ++ WQ E
Sbjct: 378 EYGVAAHWRYKEKGNSKADAAFDKQIAWLRQMVDWQDE 415
>gi|228954691|ref|ZP_04116714.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229071915|ref|ZP_04205126.1| GTP pyrophosphokinase [Bacillus cereus F65185]
gi|229081671|ref|ZP_04214166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
gi|229180683|ref|ZP_04308023.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
gi|365158800|ref|ZP_09354991.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411798|ref|ZP_17388918.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
gi|423426539|ref|ZP_17403570.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
gi|423432416|ref|ZP_17409420.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
gi|423437851|ref|ZP_17414832.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
gi|423502906|ref|ZP_17479498.1| GTP pyrophosphokinase [Bacillus cereus HD73]
gi|449091374|ref|YP_007423815.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228602828|gb|EEK60309.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
gi|228701675|gb|EEL54166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
gi|228711211|gb|EEL63175.1| GTP pyrophosphokinase [Bacillus cereus F65185]
gi|228805018|gb|EEM51614.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363626294|gb|EHL77285.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103866|gb|EJQ11843.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
gi|401111286|gb|EJQ19185.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
gi|401117172|gb|EJQ25010.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
gi|401121006|gb|EJQ28802.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
gi|402459127|gb|EJV90864.1| GTP pyrophosphokinase [Bacillus cereus HD73]
gi|449025131|gb|AGE80294.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 727
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMV-TLDYKLKTGDIIEI 451
>gi|348027280|ref|YP_004767085.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
gi|341823334|emb|CCC74258.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
Length = 734
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 217/337 (64%), Gaps = 13/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+LH + A +LA + ++T + A LLHD ++D + D + + FG VA LV+
Sbjct: 45 RVSGEPYILHPLAVAQILADMKIDTTTITASLLHDVVEDTSYTLDDLKKMFGKEVAFLVD 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+L+ +E+ + + + MFLAMA D R V+IKLADRLHNM TL +
Sbjct: 105 GVTKLSRLNYRTKEDQ------QLNSMRKMFLAMAKDVRVVVIKLADRLHNMRTLRYMRS 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDEAM 178
K++R A+ETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +
Sbjct: 159 DKQKRIAQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHVREEI 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V AI+ L++AL + +I + GR K YSI+ KM K + +++D++ +R+IV++ +
Sbjct: 219 VNEAIDVLKKALDEAHIH-CEINGRPKHFYSIYKKMKKDNRDLSQVYDLFAIRVIVDDVK 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW +P + KDYI PK N YQSLHT V G P+E+QIRT EMH A
Sbjct: 278 DCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQPVEIQIRTWEMHRIA 337
Query: 299 EFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG+ +F +M W R +L WQ
Sbjct: 338 EYGVAAHWRYKEGNQTANKDAFDEKM-GWLRNLLEWQ 373
>gi|442804848|ref|YP_007372997.1| GTP pyrophosphokinase RelA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740698|gb|AGC68387.1| GTP pyrophosphokinase RelA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 759
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 220/343 (64%), Gaps = 13/343 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+P+++H ++ A +LA + ++ V AG+LHDT++D+ +Y+ + FG +A+LV+
Sbjct: 72 RSSGEPFVIHPLQVAYILAEMEMDTATVVAGMLHDTVEDSSFTYENTLKNFGEEIANLVD 131
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+++ T + ++A+ L MFLAM+ D R ++IKLADRLHNM TL P
Sbjct: 132 GVTKLAKIP------YTNKQEIQAENLRKMFLAMSKDIRVIIIKLADRLHNMRTLKYKPR 185
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ A+ETL+I+ PLA+RLGI K +LE+L F++L+ ++ +L+ K+ + E
Sbjct: 186 EKQIEIAQETLDIYAPLAHRLGIYKVKWELEDLSFRYLHEKEYYDLAEKIAKKRKER--E 243
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
IE + + + +K + + + GR K LYSI+ KM ++ +D+I+D++ +R+IV
Sbjct: 244 EYIENIMKTVAEKAMEMGIEAHIDGRPKHLYSIYMKMKRQHKELDQIYDLFAIRVIVNTV 303
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH+L+ +PG+ KDYI+ PK N YQSLHT V G +P EVQIRT EMH
Sbjct: 304 KDCYAVLGLVHELYKPMPGRFKDYISMPKPNMYQSLHTTVIGPEGIPFEVQIRTWEMHRI 363
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
AE G AAHW+YKEG Q+ ++ W R +L WQ E D
Sbjct: 364 AEVGIAAHWKYKEGGRQNDDLSEKLA-WLRQLLDWQKETTDPD 405
>gi|423483983|ref|ZP_17460673.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-2]
gi|401141534|gb|EJQ49089.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-2]
Length = 727
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKAAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMV-TLDYKLKTGDIIEI 451
>gi|218296101|ref|ZP_03496870.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
gi|218243478|gb|EED10007.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
Length = 726
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 222/356 (62%), Gaps = 25/356 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +LA++ ++ VAAGLLHDT++D ++ + + R FG V +V
Sbjct: 41 LRKSGEPYITHPVAVAEILASLRMDADTVAAGLLHDTMEDCGVAGEELERRFGPAVRRIV 100
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EG +K+S+L K A N + A+ L MF+AMA D R +++KLADRLHN+ TL+ +P
Sbjct: 101 EGETKVSKLYKFA---NLEGEEKRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ + L ++L E + E
Sbjct: 158 EGKQKRIAQETLEIYAPLAHRLGMGQIKWELEDLSFRYLHPEAYQALLARLQETQEARER 217
Query: 178 MVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
MV A+E LE+ALK + + GR K LYSI KM ++ +++I+D+ +R+
Sbjct: 218 MVKRAMEVLEEALKQDALLQSQLQGFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRV 277
Query: 233 IVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 279
I++ ++ CY L +VH LW +PG++KDYI PK NGYQSLHT V
Sbjct: 278 ILDPKPSPTEEAKGLREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIA 337
Query: 280 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
+PLEVQIRT+EMH AE+G AAHW YKEG V + V W + + WQ E
Sbjct: 338 LEGLPLEVQIRTREMHRIAEYGIAAHWLYKEG-LTDPEEVKRRVSWLKNIQEWQQE 392
>gi|206969775|ref|ZP_03230729.1| GTP diphosphokinase [Bacillus cereus AH1134]
gi|206735463|gb|EDZ52631.1| GTP diphosphokinase [Bacillus cereus AH1134]
Length = 727
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMV-TLDYKLKTGDIIEI 451
>gi|392412123|ref|YP_006448730.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
gi|390625259|gb|AFM26466.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
Length = 737
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 210/335 (62%), Gaps = 11/335 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H V +M+LA + + VA GLLHDT++D + + I R FG +A LV+
Sbjct: 61 RRSGEPYLVHPVAVSMILAQMKLDEASVATGLLHDTVEDTLATLEEIERFFGKEIAALVD 120
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+S++ ++E +A+ M LAM+ D R +++KLADRLHNM TL +P
Sbjct: 121 GVTKISKIEFQSKEER------QAENFRKMILAMSRDIRVLMVKLADRLHNMRTLGPMPP 174
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
+ R A+ETL+I+ PLA RLGI + +LE+L F+++NP++++ ++ +L E E
Sbjct: 175 DAQVRIARETLDIYAPLAARLGIYWMRTELEDLAFRYVNPERYSTIARRLEESLKQREEY 234
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + + + ++ NI + GR+K ++SIH KM+ + L D+IHD+ R+I+ N
Sbjct: 235 ANNVLRIITEKIEQYNIKG-TIKGRNKEIFSIHQKMITQHLDFDQIHDLTAFRIILNNVS 293
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY L ++H LW VPG+ KDYI PK NGYQSLHT V G + +E+QIR+ EM L A
Sbjct: 294 ECYAVLGLIHSLWRPVPGRFKDYIAMPKSNGYQSLHTTVIGPEGLRIEIQIRSTEMDLIA 353
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E G AAHW YKEG + ++V W R ++ WQ
Sbjct: 354 EEGIAAHWSYKEGRIPEAEDA-KVVNWLRQMMEWQ 387
>gi|381210458|ref|ZP_09917529.1| GTP pyrophosphokinase [Lentibacillus sp. Grbi]
Length = 733
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 210/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H V+ A +L + + +A G LHD ++D ++ + + +F VA LV
Sbjct: 43 FRKSGEPYIVHPVQVAGILVDLEMDPVTIAGGFLHDVVEDTEVTLEQLEDSFNEEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E ++A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSKE------ALQAENHRKMFVAMARDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + + +E
Sbjct: 157 PNKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKREERET 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I++LE+ L D NI + GR K LYSI+ KM K+ +EI+D+ +R++V +
Sbjct: 217 YIDEVIDELEKQLDDVNIEADI-SGRPKHLYSIYRKMAKQNKQFNEIYDLLAVRILVHSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH
Sbjct: 276 KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIGPKGDPLEVQIRTKEMHEI 335
Query: 298 AEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG + S + W R +L WQ E
Sbjct: 336 AEYGIAAHWAYKEGKQLAKGSKSFEDRLTWFREILDWQSET 376
>gi|229175081|ref|ZP_04302598.1| GTP pyrophosphokinase [Bacillus cereus MM3]
gi|423457346|ref|ZP_17434143.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
gi|228608377|gb|EEK65682.1| GTP pyrophosphokinase [Bacillus cereus MM3]
gi|401147730|gb|EJQ55223.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
Length = 727
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|187778360|ref|ZP_02994833.1| hypothetical protein CLOSPO_01952 [Clostridium sporogenes ATCC
15579]
gi|187771985|gb|EDU35787.1| RelA/SpoT family protein [Clostridium sporogenes ATCC 15579]
Length = 723
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 210/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H E A++L +G + + AGL+HD ++D +Y+ + + FG VADLV
Sbjct: 37 RISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQYTYEDVAKEFGNEVADLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM D R +LIKLADRLHNM TL +P+
Sbjct: 97 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP+++ L K+ E E
Sbjct: 151 EKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEH 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + L+Q LK I + GR K YSI+ KM K +D+I D+ +R++V+ +
Sbjct: 211 IKEIVSNLQQNLKKAGIESEI-DGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRILVDTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G G P E+QIRT EMH A
Sbjct: 270 DCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPFEIQIRTYEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKE ++S+ + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEA-VENSNNIDLKLTWLREMLDWQKET 366
>gi|344996822|ref|YP_004799165.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor lactoaceticus
6A]
gi|343965041|gb|AEM74188.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
lactoaceticus 6A]
Length = 726
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 218/341 (63%), Gaps = 16/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R+SG+PY++H +E A++LA + + + AGLLHD ++D S + + R FG +A+LV
Sbjct: 43 VRSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSASLEDVEREFGKEIAELV 102
Query: 61 EGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLD 116
+GV+KL +L SKL R+ A+ M +AMA D R +LIKLADRLHNM TL
Sbjct: 103 DGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIRVILIKLADRLHNMRTLK 153
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CF 174
LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+P+ + +L K+ +
Sbjct: 154 YLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVE 213
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I + + LK+ NI + GR K YSI+ KM ++ T++EI+D++ +R+IV
Sbjct: 214 REEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV 273
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V G P EVQIRT +M
Sbjct: 274 NSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPFEVQIRTFDM 333
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
H AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 334 HRTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 373
>gi|317484827|ref|ZP_07943721.1| RelA/SpoT family protein [Bilophila wadsworthia 3_1_6]
gi|345890061|ref|ZP_08841020.1| hypothetical protein HMPREF0178_03794 [Bilophila sp. 4_1_30]
gi|316923921|gb|EFV45113.1| RelA/SpoT family protein [Bilophila wadsworthia 3_1_6]
gi|345038932|gb|EGW43306.1| hypothetical protein HMPREF0178_03794 [Bilophila sp. 4_1_30]
Length = 738
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 213/338 (63%), Gaps = 10/338 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H + A +LA +G ++ VAAGLLHDT++D ++ + + FG VAD+V
Sbjct: 49 VRLSGEPYLSHPLAVAEVLAELGFDAHSVAAGLLHDTVEDTKVTLEEVDAEFGEQVADIV 108
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+K+S ++ ++E +A+ + M LAM+ D R ++KLADR+HNM TLD
Sbjct: 109 DGVTKISMMTFDSKEEQ------QAENIRKMILAMSHDIRVPIVKLADRVHNMRTLDFQK 162
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
KRQR A+ET++I+VPLANRLG+ K++LE L FK+++PD + ++S L + +
Sbjct: 163 AHKRQRIAQETMDIYVPLANRLGLHRLKLELEGLSFKYIHPDVYAQISDWLESNQVVERQ 222
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ I KLE L I V GR K +YSI+ KM ++ LT+D++HDI R+IV++
Sbjct: 223 LIAKIIAKLEGILSSNQIEGTV-WGRIKHIYSIYKKMTEQNLTLDDMHDILAFRVIVKDV 281
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L +VH W VPG+ KDYI+ PK NGYQSLHT V G +E+QIRT+EMH
Sbjct: 282 RDCYAVLGLVHAQWKPVPGRFKDYISMPKANGYQSLHTTVIGPEGERIEIQIRTEEMHRL 341
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G A+HW YKE S EW R ++ Q +
Sbjct: 342 AEHGVASHWLYKERHHAVSVKDAPEFEWLREIVNRQGQ 379
>gi|312792967|ref|YP_004025890.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180107|gb|ADQ40277.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 726
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 218/341 (63%), Gaps = 16/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R+SG+PY++H +E A++LA + + + AGLLHD ++D S + + R FG +A+LV
Sbjct: 43 VRSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSASLEDVEREFGKEIAELV 102
Query: 61 EGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLD 116
+GV+KL +L SKL R+ A+ M +AMA D R +LIKLADRLHNM TL
Sbjct: 103 DGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIRVILIKLADRLHNMRTLK 153
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CF 174
LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+P+ + +L K+ +
Sbjct: 154 YLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVE 213
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I + + LK+ NI + GR K YSI+ KM ++ T++EI+D++ +R+IV
Sbjct: 214 REEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIV 273
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V G P EVQIRT +M
Sbjct: 274 NSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPFEVQIRTFDM 333
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
H AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 334 HRTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 373
>gi|148243334|ref|YP_001228491.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. RCC307]
gi|147851644|emb|CAK29138.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. RCC307]
Length = 773
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/343 (44%), Positives = 206/343 (60%), Gaps = 10/343 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RA+G+PY++H V A LL IGA++ V+AAG LHD ++D +S + I FGA V LV
Sbjct: 83 VRATGEPYIIHPVAVADLLRDIGASAAVIAAGFLHDVVEDTDVSLEEIEGHFGAEVRQLV 142
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + + T +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 143 EGVTKLGGI------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTLGALR 196
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+QR A ET +I+ PLANRLGI +K +LE+L FK L PD +S ++ E
Sbjct: 197 PEKQQRIATETRDIYAPLANRLGIGRFKWELEDLAFKVLEPDDFRSISQQVASKRSDREE 256
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L L++ + + GR K LY I KM +++ EI D+ +R++ +
Sbjct: 257 RLGVTVQLLRDRLENSGVHECEVVGRPKHLYGIWSKMQRQEKEFHEIFDVAAVRIVAPSV 316
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 317 ETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTGEMHEV 375
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
AE+G AAHW+YKEG + W R ++ WQ E +D
Sbjct: 376 AEYGIAAHWKYKEGGSPADGDEMARFNWLRQLVDWQKEEGGQD 418
>gi|47529935|ref|YP_021284.1| GTP pyrophosphokinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187297|ref|YP_030549.1| GTP pyrophosphokinase [Bacillus anthracis str. Sterne]
gi|65321773|ref|ZP_00394732.1| COG0317: Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Bacillus anthracis str. A2012]
gi|165871974|ref|ZP_02216615.1| GTP diphosphokinase [Bacillus anthracis str. A0488]
gi|167636486|ref|ZP_02394783.1| GTP diphosphokinase [Bacillus anthracis str. A0442]
gi|167640729|ref|ZP_02398989.1| GTP diphosphokinase [Bacillus anthracis str. A0193]
gi|170688669|ref|ZP_02879874.1| GTP diphosphokinase [Bacillus anthracis str. A0465]
gi|170709262|ref|ZP_02899682.1| GTP diphosphokinase [Bacillus anthracis str. A0389]
gi|177653959|ref|ZP_02936000.1| GTP diphosphokinase [Bacillus anthracis str. A0174]
gi|190567043|ref|ZP_03019959.1| GTP diphosphokinase [Bacillus anthracis str. Tsiankovskii-I]
gi|227817185|ref|YP_002817194.1| GTP diphosphokinase [Bacillus anthracis str. CDC 684]
gi|229602848|ref|YP_002868693.1| GTP diphosphokinase [Bacillus anthracis str. A0248]
gi|254684162|ref|ZP_05148022.1| GTP diphosphokinase [Bacillus anthracis str. CNEVA-9066]
gi|254736509|ref|ZP_05194215.1| GTP diphosphokinase [Bacillus anthracis str. Western North America
USA6153]
gi|254741547|ref|ZP_05199234.1| GTP diphosphokinase [Bacillus anthracis str. Kruger B]
gi|254751354|ref|ZP_05203391.1| GTP diphosphokinase [Bacillus anthracis str. Vollum]
gi|254757686|ref|ZP_05209713.1| GTP diphosphokinase [Bacillus anthracis str. Australia 94]
gi|386738296|ref|YP_006211477.1| GTP pyrophosphokinase [Bacillus anthracis str. H9401]
gi|421506659|ref|ZP_15953582.1| GTP pyrophosphokinase [Bacillus anthracis str. UR-1]
gi|421638475|ref|ZP_16079071.1| GTP pyrophosphokinase [Bacillus anthracis str. BF1]
gi|47505083|gb|AAT33759.1| GTP diphosphokinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181224|gb|AAT56600.1| GTP pyrophosphokinase [Bacillus anthracis str. Sterne]
gi|164712264|gb|EDR17800.1| GTP diphosphokinase [Bacillus anthracis str. A0488]
gi|167511301|gb|EDR86687.1| GTP diphosphokinase [Bacillus anthracis str. A0193]
gi|167528079|gb|EDR90876.1| GTP diphosphokinase [Bacillus anthracis str. A0442]
gi|170125838|gb|EDS94745.1| GTP diphosphokinase [Bacillus anthracis str. A0389]
gi|170667355|gb|EDT18113.1| GTP diphosphokinase [Bacillus anthracis str. A0465]
gi|172081014|gb|EDT66092.1| GTP diphosphokinase [Bacillus anthracis str. A0174]
gi|190562034|gb|EDV16003.1| GTP diphosphokinase [Bacillus anthracis str. Tsiankovskii-I]
gi|227006997|gb|ACP16740.1| GTP diphosphokinase [Bacillus anthracis str. CDC 684]
gi|229267256|gb|ACQ48893.1| GTP diphosphokinase [Bacillus anthracis str. A0248]
gi|384388148|gb|AFH85809.1| GTP pyrophosphokinase [Bacillus anthracis str. H9401]
gi|401823652|gb|EJT22799.1| GTP pyrophosphokinase [Bacillus anthracis str. UR-1]
gi|403394901|gb|EJY92141.1| GTP pyrophosphokinase [Bacillus anthracis str. BF1]
Length = 727
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGVLVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 451
>gi|225593179|gb|ACN96096.1| (p)ppGpp synthetase I [Fischerella sp. MV11]
Length = 758
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/340 (45%), Positives = 210/340 (61%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +L +G ++ ++AAG LHD ++D ++ + I + FG+ V LVE
Sbjct: 60 RKSGEPYICHPIAVAGMLRDLGGSAAMIAAGFLHDVVEDTDVTIEEIEQRFGSEVRCLVE 119
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS++ N SKT +A+ MFLAMA D R +++KLADRLHNM TL+ +P
Sbjct: 120 GVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEYMP 172
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
KR+R A ET EIF PLANRLGI +K +LE+L FK+L P+ ++ + E E
Sbjct: 173 DEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFKYLEPEAFRQIQQLVSEKRTDREE 232
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E L L + I L + GR K LYSI+ KM ++ EI+D+ LR+IV+
Sbjct: 233 RLKKISETLRTRLAEAGIRCLDISGRPKHLYSIYQKMQRQNKEFHEIYDLAALRIIVQTN 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH ++ +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 293 EECYRALAVVHDVFRPIPGRFKDYIGLPKPNRYQSLHTGVIGPWGRPLEVQIRTMEMHHV 352
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
AE+G AAHW+YKE H+ + W R +L WQ +
Sbjct: 353 AEYGIAAHWKYKETGGSHTGLTASDEKFTWLRQLLEWQSD 392
>gi|424826931|ref|ZP_18251766.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
gi|365980468|gb|EHN16498.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
Length = 723
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 210/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H E A++L +G + + AGL+HD ++D +Y+ + + FG VADLV
Sbjct: 37 RISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQYTYEDVAKEFGNEVADLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM D R +LIKLADRLHNM TL +P+
Sbjct: 97 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVILIKLADRLHNMRTLRFMPV 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP+++ L K+ E E
Sbjct: 151 EKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNEYYFLVRKIAEKRAEREEH 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + L+Q LK I + GR K YSI+ KM K +D+I D+ +R++V+ +
Sbjct: 211 IKEIVSNLQQNLKKAGIESEI-DGRPKHFYSIYKKMHNKNKNLDQIFDLTAVRILVDTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G G P E+QIRT EMH A
Sbjct: 270 DCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGVGGRPFEIQIRTYEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKE ++S+ + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEA-VENSNNIDLKLTWLREMLDWQKET 366
>gi|157412548|ref|YP_001483414.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9215]
gi|157387123|gb|ABV49828.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9215]
Length = 769
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 211/345 (61%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D + I FG V LV
Sbjct: 78 FRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTGIDLYEIETNFGLEVKILV 137
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + R +A+ L MFLAMA D R VL+KLADRLHNM T++ L
Sbjct: 138 EGVTKLGGIHFNNR------TEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTIEWLN 191
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EA 177
K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P ++ +L ++ V+ D E
Sbjct: 192 DEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPKEYLDLKDQIAVKRSDREK 251
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +++ L + + GR K LY I KM +++ EI+D+ LR+IV+N
Sbjct: 252 RLKLTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQKHFHEIYDVAALRIIVDNS 311
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT MH
Sbjct: 312 DSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGYQSLHTSVIGRHR-PIEVQIRTTSMHQI 370
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
AE+G AAHW+YKEG S + W R ++ WQ E +D +
Sbjct: 371 AEYGIAAHWQYKEGGSPAKSNA-ERFNWLRQLVEWQQEGNERDHN 414
>gi|42783537|ref|NP_980784.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10987]
gi|384182226|ref|YP_005567988.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402555460|ref|YP_006596731.1| GTP pyrophosphokinase [Bacillus cereus FRI-35]
gi|42739466|gb|AAS43392.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10987]
gi|324328310|gb|ADY23570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|401796670|gb|AFQ10529.1| GTP pyrophosphokinase [Bacillus cereus FRI-35]
Length = 727
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 176/454 (38%), Positives = 248/454 (54%), Gaps = 54/454 (11%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV------ECF 174
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + + E +
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E ++T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++V
Sbjct: 218 LEEVMTGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEM
Sbjct: 273 NSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEM 332
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
H AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 333 HEIAEFGIAAHWAYKEGKTAETAGTLEKKLTWFRQILEWQNEA----------------- 375
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWS 413
S+A++ S K D VFV + D V E P S +D R S
Sbjct: 376 ----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------S 421
Query: 414 PYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
G + + ++N K V KLK GD++E+
Sbjct: 422 EIG---NKTIGAKVNGKMV-TLDYKLKTGDIIEI 451
>gi|225021310|ref|ZP_03710502.1| hypothetical protein CORMATOL_01329 [Corynebacterium matruchotii
ATCC 33806]
gi|224946043|gb|EEG27252.1| hypothetical protein CORMATOL_01329 [Corynebacterium matruchotii
ATCC 33806]
Length = 744
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 150/341 (43%), Positives = 213/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S D + FG VA LV
Sbjct: 54 FRKSGDPYITHPLAVATIAAEIGMDTTTIIASLLHDTVEDTEYSLDDLTNDFGEEVARLV 113
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 114 DGVTKLDKVALGA--------AAEAETIRKMVMAMAQDPRVLVIKVADRLHNMRTMRFLP 165
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TL++ PLA+RLG+S+ K +LE+L F L P ++ E+ + + +
Sbjct: 166 PEKQAKKARQTLDVIAPLAHRLGMSSVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDR 225
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I L+Q LK+ NI V GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 226 YLQEIISILQQGLKENNIDAEV-KGRPKHYWSIYQKMVMRGKDFDEIFDLVGIRILVDNL 284
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L+A +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH+
Sbjct: 285 NNCYAAIGVVHSLFAAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHVN 344
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE HS + + W R +L WQ EA
Sbjct: 345 AEYGIAAHWRYKETKGSHSGEQAEIDQMAWMRQLLDWQKEA 385
>gi|428770116|ref|YP_007161906.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium aponinum PCC 10605]
gi|428684395|gb|AFZ53862.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium aponinum PCC
10605]
Length = 751
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 166/428 (38%), Positives = 245/428 (57%), Gaps = 31/428 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY+ H + A LL +G +S ++AAG LHD ++D + + I FG V LV
Sbjct: 55 MRKSGEPYIAHPIAVAELLRDLGGDSEMIAAGFLHDVVEDTPTTPEDIEVMFGKNVRQLV 114
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
E V+KLS+ N +SKT +A+ MF+AMA D R +++KLADRLHNM TLD L
Sbjct: 115 EAVTKLSKF-------NFSSKTERQAENFRRMFIAMAQDIRVIVVKLADRLHNMRTLDFL 167
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
P K++ A+ET EIF PLANRLGI +K +LE+L FK+L+P+ + ++ + + E E
Sbjct: 168 PPEKQRLIAEETKEIFAPLANRLGIWHFKWELEDLSFKYLHPEAYNKIKNLIAERRTDRE 227
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A + + I+ + Q L++ I + + GR K LY I+ KM+++K ++I+DI +R+IV
Sbjct: 228 ARIENVIDTINQRLENLGIHPVEVKGRPKHLYGIYHKMMRQKKEFEQIYDIAAVRIIVNT 287
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
++CY+ L VVH + +PG+ KDYI PK N YQSLHT V PLE+QIRT EMH
Sbjct: 288 NDECYRTLAVVHDAFRPIPGRFKDYIGLPKPNLYQSLHTTVVNSNGRPLEIQIRTLEMHY 347
Query: 297 QAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
AE+G AAHW+YKE + +H S + W R +L WQ + D++K
Sbjct: 348 VAEYGIAAHWKYKETGHSNHRHLSSDDEKFTWLRQLLDWQKDLKDAQEYV----DNLKEN 403
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQ-EFPTSSTVMDLLERAGRGSSRW 412
DD +++ P VI + +V + S V + + + R + +W
Sbjct: 404 L-----FDDDVYAFTPNGD------VIALARGATAVDFAYRIHSEVGNHM-KGARINDKW 451
Query: 413 SPYGFPLK 420
SP PL+
Sbjct: 452 SPLDQPLQ 459
>gi|340357216|ref|ZP_08679839.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
gi|339618078|gb|EGQ22679.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
Length = 732
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 150/340 (44%), Positives = 215/340 (63%), Gaps = 12/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY+ H ++ A +LA + + VAAG LHD ++D +S + I R FG VA LV+
Sbjct: 44 RSSGEPYINHPIQVAGILAELQMDPETVAAGFLHDVVEDTEVSREDIIREFGDEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L + E +A+ MF+AMA D R +LIKLADRLHNM TL +P
Sbjct: 104 GVTKLDKLKFKSNEEK------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHVPA 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R ++ETLEIF PLA+RLGIST K +LE++ ++ NP Q+ + + K E
Sbjct: 158 AKQRRVSEETLEIFSPLAHRLGISTIKWELEDIALRYSNPQQYYRIVNLMKQKRVEREKY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E++ L + I+ + GR K LYSI+ KM+ +K +EI+D+ +R++V++ +
Sbjct: 218 LQDVMEQMRVELDNMGIAS-EMHGRPKHLYSIYQKMVIQKKEFNEIYDLLAVRIVVKSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL ++H LW +PG+ KDYI PK N YQSLHT V G PLEVQIRT+EMH +
Sbjct: 277 DCYAALGIIHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPAGDPLEVQIRTEEMHRIS 336
Query: 299 EFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW YKEG + S+ + + W R +L Q E+
Sbjct: 337 EFGVAAHWAYKEGKSVAKSSNDIDSKLTWFREILEIQNES 376
>gi|229025869|ref|ZP_04182265.1| GTP pyrophosphokinase [Bacillus cereus AH1272]
gi|423389281|ref|ZP_17366507.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-3]
gi|423417674|ref|ZP_17394763.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-1]
gi|228735421|gb|EEL86020.1| GTP pyrophosphokinase [Bacillus cereus AH1272]
gi|401106845|gb|EJQ14802.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-1]
gi|401641372|gb|EJS59089.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-3]
Length = 727
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|423521737|ref|ZP_17498210.1| GTP pyrophosphokinase [Bacillus cereus HuA4-10]
gi|401176399|gb|EJQ83594.1| GTP pyrophosphokinase [Bacillus cereus HuA4-10]
Length = 727
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|410724219|ref|ZP_11363418.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
gi|410602505|gb|EKQ56985.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
Length = 738
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 215/348 (61%), Gaps = 22/348 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +LA +G ++ + AGLLHD ++D SYD + F A +A+LVE
Sbjct: 37 RESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTDCSYDETVKLFNAEIANLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L ++ + +AD + M LAMA D R ++IKLADRLHNM TL +P
Sbjct: 97 GVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPE 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE------CF 174
K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ ++ EL + E +
Sbjct: 154 KKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKEYYELVDSIAEKRVERETY 213
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
+ +V EKLE + +I GR K YSI+ KM+ K ++++I D+ +R++V
Sbjct: 214 IKDIVKDLYEKLETSGIHSDID-----GRPKHFYSIYKKMVSKNKSIEQIFDLTAIRVLV 268
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EM
Sbjct: 269 HSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGKTFEIQIRTFEM 328
Query: 295 HLQAEFGFAAHWRYKEGDC------QHSSFVLQMVEWARWVLTWQCEA 336
H AE+G AAHW+YKEGD + F ++V W R +L WQ E
Sbjct: 329 HKTAEYGIAAHWKYKEGDAGKPEQDKQKDFEKKLV-WLRDMLEWQKET 375
>gi|313891996|ref|ZP_07825597.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
gi|313119639|gb|EFR42830.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
Length = 783
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 204/335 (60%), Gaps = 10/335 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RA+G+PY+ H + A +L+ + + + A LLHD +D + + I FG +A LV+
Sbjct: 98 RATGEPYIFHPLSVAYILSELELDRNAIVAALLHDVAEDTDTTLEDIENQFGKEIAFLVD 157
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLSQ +E+ + + MFLAMA D R V+IKLADRLHNM TL
Sbjct: 158 GVTKLSQFKYKNKEDQ------QLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRK 211
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
KRQR AKET+EI+ PLA+RLGI K +LE+LCF +L P+ + +L S++ E EA+
Sbjct: 212 EKRQRVAKETIEIYAPLAHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAI 271
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + L++ + + NI V+ GR K YSI+ KM + + +I+D+Y +R+IV+
Sbjct: 272 VEDTMHVLKEKIDETNIK-AVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIP 330
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY L +VH LW +P + KDYI PK N YQSLHT + G P+E+QIRT EMH +
Sbjct: 331 QCYAVLGIVHSLWKPLPKRFKDYIAVPKPNMYQSLHTTIIGTKGQPVEIQIRTWEMHHVS 390
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG+ +S + W R +L WQ
Sbjct: 391 EYGIAAHWRYKEGNSNNSQKFDSKIGWLRRILEWQ 425
>gi|126700359|ref|YP_001089256.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
gi|254976339|ref|ZP_05272811.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-66c26]
gi|255093724|ref|ZP_05323202.1| putative GTP pyrophosphokinase [Clostridium difficile CIP 107932]
gi|255101915|ref|ZP_05330892.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-63q42]
gi|255307784|ref|ZP_05351955.1| putative GTP pyrophosphokinase [Clostridium difficile ATCC 43255]
gi|255315476|ref|ZP_05357059.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-76w55]
gi|255518139|ref|ZP_05385815.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-97b34]
gi|255651255|ref|ZP_05398157.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-37x79]
gi|260684319|ref|YP_003215604.1| GTP pyrophosphokinase [Clostridium difficile CD196]
gi|260687978|ref|YP_003219112.1| GTP pyrophosphokinase [Clostridium difficile R20291]
gi|296452442|ref|ZP_06894143.1| GTP diphosphokinase [Clostridium difficile NAP08]
gi|296877791|ref|ZP_06901817.1| GTP diphosphokinase [Clostridium difficile NAP07]
gi|306521098|ref|ZP_07407445.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-32g58]
gi|384361963|ref|YP_006199815.1| GTP pyrophosphokinase [Clostridium difficile BI1]
gi|423081063|ref|ZP_17069675.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
gi|423085064|ref|ZP_17073522.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
gi|423089842|ref|ZP_17078191.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
gi|115251796|emb|CAJ69631.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
gi|260210482|emb|CBA64959.1| putative GTP pyrophosphokinase [Clostridium difficile CD196]
gi|260213995|emb|CBE06110.1| putative GTP pyrophosphokinase [Clostridium difficile R20291]
gi|296258772|gb|EFH05666.1| GTP diphosphokinase [Clostridium difficile NAP08]
gi|296431242|gb|EFH17063.1| GTP diphosphokinase [Clostridium difficile NAP07]
gi|357550919|gb|EHJ32724.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
gi|357551372|gb|EHJ33162.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
gi|357557606|gb|EHJ39140.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
Length = 735
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 207/336 (61%), Gaps = 12/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY +H + A +L + + + AGLLHD ++D +Y+ I + FG VADLV+
Sbjct: 41 RKSGEPYFIHPLAVANILIEMELDIETITAGLLHDVVEDTEYTYEDIKKEFGKEVADLVD 100
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL Q+ ++E +++ L MFLAMA D R +LIKLADRLHNM TL +P
Sbjct: 101 GVTKLGQIKYRSKEE------TQSENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPP 154
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K + AKETLEI+ +A+RLGIS K +LE+ + ++P+ + +L S++ +
Sbjct: 155 EKAKYKAKETLEIYGGIAHRLGISKIKWELEDRALRFMDPEGYYDLVSRV--SMKRSQRE 212
Query: 181 SAIEKLEQALKDKNISFLVLC---GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
I+ + + LKDK + C GR K YSI+ KM KK T +EI D+ +R++V+N
Sbjct: 213 DYIQGIVELLKDKFKDLSIPCDVYGRPKHFYSIYRKMQKKHKTFEEIFDLTAVRILVDNV 272
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 273 KDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEPLEIQIRTHEMHNI 332
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
AE G AAHW+YKEG S V + ++W R ++ W+
Sbjct: 333 AENGIAAHWKYKEGISSKESKVEEKLQWLRQMMEWE 368
>gi|423478548|ref|ZP_17455263.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-1]
gi|402427544|gb|EJV59650.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-1]
Length = 726
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|423400750|ref|ZP_17377923.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-2]
gi|401653740|gb|EJS71283.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-2]
Length = 727
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|302387920|ref|YP_003823742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium saccharolyticum WM1]
gi|302198548|gb|ADL06119.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium saccharolyticum WM1]
Length = 774
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 220/337 (65%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAG+LHD ++D +S D + FG VA LV+
Sbjct: 77 RKSGEPYIIHPLCVAIILADLEMDKETIAAGILHDVVEDTIMSLDELKAEFGEEVALLVD 136
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+Q+S + ++A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 137 GVTKLTQISW-----SMDKMEIQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMKP 191
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ AKET+EI+ P+A+RLGIS K++L++L ++L P+ + EL+ K+ D E
Sbjct: 192 EKQKEKAKETMEIYAPIAHRLGISKIKIELDDLSLRYLQPEIYYELAEKISLKKDARETF 251
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V S +++++ L+ I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +
Sbjct: 252 VKSIVDEVQDHLRSGGIEARV-DGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIIVDSVK 310
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 311 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGNNGQPFEIQIRTYEMHRTA 370
Query: 299 EFGFAAHWRYKE-GDCQHSSFV-LQMVEWARWVLTWQ 333
E+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 371 EYGIAAHWKYKESGSGQVAAGKEEEKLSWLRQILEWQ 407
>gi|443315184|ref|ZP_21044689.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 6406]
gi|442785224|gb|ELR95059.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 6406]
Length = 762
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 151/342 (44%), Positives = 212/342 (61%), Gaps = 14/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASG+PY+ H + A LL +G +S ++AAG LHD ++D ++ + I FG V LV
Sbjct: 62 MRASGEPYICHPIAVASLLRDLGGDSAMIAAGFLHDIVEDTDVTPEEIEAQFGGEVRRLV 121
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
EGV+KLS+ N SKT +A+ MFLAMA DAR +++KLADRLHNM TL+ L
Sbjct: 122 EGVTKLSKF-------NFQSKTERQAENFRRMFLAMAQDARVIVVKLADRLHNMRTLEHL 174
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
K++R A+ET EIF PLANRLGI +K +LE+L FK+L PD + + + E E
Sbjct: 175 KPEKQRRIAQETSEIFAPLANRLGIGRFKWELEDLSFKYLEPDAYRHMQDCVSEKRTDRE 234
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ + L + L++ + + + GR K LY I+ KM +++ EI D+ +R+IV N
Sbjct: 235 SRLQLVAATLRERLEEAGVKVVEVSGRPKHLYGIYRKMERQQKAFHEIFDVAAVRVIVHN 294
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+++CY+ L +VH + +PG+ KDYI PK N YQSLHTVV G P+EVQIRT EMH
Sbjct: 295 KDECYRTLAIVHDAFRPIPGRFKDYIGLPKPNRYQSLHTVVLGNHGRPIEVQIRTLEMHH 354
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVL---QMVEWARWVLTWQCE 335
AE+G AAHW+YKE ++ V + W R +L WQ +
Sbjct: 355 VAEYGIAAHWKYKESGGSSNTQVTTDDEKFTWLRQLLEWQSD 396
>gi|163942157|ref|YP_001647041.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus weihenstephanensis KBAB4]
gi|229135230|ref|ZP_04264029.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST196]
gi|229169150|ref|ZP_04296865.1| GTP pyrophosphokinase [Bacillus cereus AH621]
gi|423368453|ref|ZP_17345885.1| GTP pyrophosphokinase [Bacillus cereus VD142]
gi|423489585|ref|ZP_17466267.1| GTP pyrophosphokinase [Bacillus cereus BtB2-4]
gi|423495308|ref|ZP_17471952.1| GTP pyrophosphokinase [Bacillus cereus CER057]
gi|423497898|ref|ZP_17474515.1| GTP pyrophosphokinase [Bacillus cereus CER074]
gi|423519105|ref|ZP_17495586.1| GTP pyrophosphokinase [Bacillus cereus HuA2-4]
gi|423591601|ref|ZP_17567632.1| GTP pyrophosphokinase [Bacillus cereus VD048]
gi|163864354|gb|ABY45413.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus weihenstephanensis
KBAB4]
gi|228614378|gb|EEK71488.1| GTP pyrophosphokinase [Bacillus cereus AH621]
gi|228648272|gb|EEL04308.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST196]
gi|401080780|gb|EJP89064.1| GTP pyrophosphokinase [Bacillus cereus VD142]
gi|401151401|gb|EJQ58853.1| GTP pyrophosphokinase [Bacillus cereus CER057]
gi|401160160|gb|EJQ67539.1| GTP pyrophosphokinase [Bacillus cereus HuA2-4]
gi|401161185|gb|EJQ68552.1| GTP pyrophosphokinase [Bacillus cereus CER074]
gi|401231734|gb|EJR38236.1| GTP pyrophosphokinase [Bacillus cereus VD048]
gi|402431821|gb|EJV63885.1| GTP pyrophosphokinase [Bacillus cereus BtB2-4]
Length = 727
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKAAETTGTLEKKLTWFRQILEWQNEA 375
>gi|359461025|ref|ZP_09249588.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris sp. CCMEE 5410]
Length = 732
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 212/342 (61%), Gaps = 15/342 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ H V A LL +G ++ ++AAG LHD ++D ++ + I FG V LVE
Sbjct: 35 RASGEPYIAHPVSVAELLRDLGGSAAMIAAGFLHDVVEDTDVTPETIEAEFGLEVRQLVE 94
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N ++KT EA+ MFLAMA D R +++KLADRLHNM TL+ LP
Sbjct: 95 GVTKLSKF-------NFSTKTEREAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEHLP 147
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A+ET ++F PLANRLGI +K +LE+L FK+L PD + ++ + + E
Sbjct: 148 PAKQRRIAQETRDVFAPLANRLGIWRFKWELEDLAFKYLEPDTYRKMQQLVADKRTDREE 207
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ AI L L+ + L + GR K L+SI KM +++ EI+D+ +R+IV+
Sbjct: 208 HIEQAITILHDRLEPICSNHLEISGRPKHLFSISQKMERQQKEFHEIYDVAAVRVIVKTN 267
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH + +PG+ KDYI PK N YQSLHTVV G G PLEVQIRT+ MH
Sbjct: 268 EECYRALAVVHDCFRPIPGRFKDYIGLPKSNRYQSLHTVVIGLGGRPLEVQIRTEAMHHI 327
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL----QMVEWARWVLTWQCE 335
AE+G AAHW+YKE Q + W R +L WQ +
Sbjct: 328 AEYGIAAHWKYKESSNQPGKTAWSPDDEKFTWLRQLLEWQSD 369
>gi|78778579|ref|YP_396691.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9312]
gi|78712078|gb|ABB49255.1| metal dependent phosphohydrolase [Prochlorococcus marinus str. MIT
9312]
Length = 769
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 211/345 (61%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H V A LL IGA+++V+AAGLLHD ++D + I FG V LV
Sbjct: 78 FRASGEPYIIHPVAVANLLKEIGASTSVIAAGLLHDVVEDTGIDLSEIETNFGLEVKILV 137
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + NN +A+ L MFLAMA D R VL+KLADRLHNM T++ L
Sbjct: 138 EGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVVLVKLADRLHNMRTIEWLN 191
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EA 177
K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P ++ +L ++ V+ D E
Sbjct: 192 DEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPKEYKDLKDQIAVKRSDREK 251
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +++ L + + GR K LY I KM +++ EI+D+ LR+IV+N
Sbjct: 252 RLKVTLNLMKENLVSAGLKNFEITGRPKHLYGIWSKMERQQKHFHEIYDVAALRIIVDNS 311
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT MH
Sbjct: 312 DSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGYQSLHTSVIGRHR-PIEVQIRTTSMHQI 370
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
AE+G AAHW+YKEG S + W R ++ WQ E D +
Sbjct: 371 AEYGIAAHWQYKEGGSPAKSNA-ERFNWLRQLVEWQQEGNEGDHN 414
>gi|407706935|ref|YP_006830520.1| hypothetical protein MC28_3699 [Bacillus thuringiensis MC28]
gi|423615251|ref|ZP_17591085.1| GTP pyrophosphokinase [Bacillus cereus VD115]
gi|401260930|gb|EJR67097.1| GTP pyrophosphokinase [Bacillus cereus VD115]
gi|407384620|gb|AFU15121.1| GTP pyrophosphokinase [Bacillus thuringiensis MC28]
Length = 727
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|229032057|ref|ZP_04188039.1| GTP pyrophosphokinase [Bacillus cereus AH1271]
gi|228729249|gb|EEL80244.1| GTP pyrophosphokinase [Bacillus cereus AH1271]
Length = 727
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|425443682|ref|ZP_18823753.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9443]
gi|389730348|emb|CCI05359.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9443]
Length = 765
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 209/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEDRFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLT 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + ++ S K ++
Sbjct: 179 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRQVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 EARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L +VH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|229076038|ref|ZP_04209009.1| GTP pyrophosphokinase [Bacillus cereus Rock4-18]
gi|229098881|ref|ZP_04229817.1| GTP pyrophosphokinase [Bacillus cereus Rock3-29]
gi|229105045|ref|ZP_04235697.1| GTP pyrophosphokinase [Bacillus cereus Rock3-28]
gi|229117906|ref|ZP_04247268.1| GTP pyrophosphokinase [Bacillus cereus Rock1-3]
gi|423377736|ref|ZP_17355020.1| GTP pyrophosphokinase [Bacillus cereus BAG1O-2]
gi|423440844|ref|ZP_17417750.1| GTP pyrophosphokinase [Bacillus cereus BAG4X2-1]
gi|423448988|ref|ZP_17425867.1| GTP pyrophosphokinase [Bacillus cereus BAG5O-1]
gi|423463908|ref|ZP_17440676.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-1]
gi|423533272|ref|ZP_17509690.1| GTP pyrophosphokinase [Bacillus cereus HuB2-9]
gi|423541473|ref|ZP_17517864.1| GTP pyrophosphokinase [Bacillus cereus HuB4-10]
gi|423547709|ref|ZP_17524067.1| GTP pyrophosphokinase [Bacillus cereus HuB5-5]
gi|423622506|ref|ZP_17598284.1| GTP pyrophosphokinase [Bacillus cereus VD148]
gi|228665563|gb|EEL21043.1| GTP pyrophosphokinase [Bacillus cereus Rock1-3]
gi|228678355|gb|EEL32580.1| GTP pyrophosphokinase [Bacillus cereus Rock3-28]
gi|228684554|gb|EEL38496.1| GTP pyrophosphokinase [Bacillus cereus Rock3-29]
gi|228707072|gb|EEL59274.1| GTP pyrophosphokinase [Bacillus cereus Rock4-18]
gi|401129582|gb|EJQ37265.1| GTP pyrophosphokinase [Bacillus cereus BAG5O-1]
gi|401172661|gb|EJQ79882.1| GTP pyrophosphokinase [Bacillus cereus HuB4-10]
gi|401179430|gb|EJQ86603.1| GTP pyrophosphokinase [Bacillus cereus HuB5-5]
gi|401260626|gb|EJR66794.1| GTP pyrophosphokinase [Bacillus cereus VD148]
gi|401636002|gb|EJS53756.1| GTP pyrophosphokinase [Bacillus cereus BAG1O-2]
gi|402417505|gb|EJV49805.1| GTP pyrophosphokinase [Bacillus cereus BAG4X2-1]
gi|402420175|gb|EJV52446.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-1]
gi|402463491|gb|EJV95191.1| GTP pyrophosphokinase [Bacillus cereus HuB2-9]
Length = 727
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|329121021|ref|ZP_08249652.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
gi|327471183|gb|EGF16637.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
Length = 783
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 204/335 (60%), Gaps = 10/335 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RA+G+PY+ H + A +L+ + + + A LLHD +D + + I FG +A LV+
Sbjct: 98 RATGEPYIFHPLSVAYILSELELDRNAIVAALLHDVAEDTDTTLEDIENQFGKEIAFLVD 157
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLSQ +E+ + + MFLAMA D R V+IKLADRLHNM TL
Sbjct: 158 GVTKLSQFKYKNKEDQ------QLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRK 211
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
KRQR AKET+EI+ PLA+RLGI K +LE+LCF +L P+ + +L S++ E EA+
Sbjct: 212 EKRQRVAKETIEIYAPLAHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAI 271
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + L++ + + NI V+ GR K YSI+ KM + + +I+D+Y +R+IV+
Sbjct: 272 VEDTMHVLKEKIDETNIK-AVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIP 330
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY L +VH LW +P + KDYI PK N YQSLHT + G P+E+QIRT EMH +
Sbjct: 331 QCYAVLGIVHSLWKPLPKRFKDYIAVPKPNMYQSLHTTIIGTKGQPVEIQIRTWEMHHVS 390
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG+ +S + W R +L WQ
Sbjct: 391 EYGIAAHWRYKEGNSNNSQKFDSKIGWLRRILEWQ 425
>gi|229013624|ref|ZP_04170755.1| GTP pyrophosphokinase [Bacillus mycoides DSM 2048]
gi|423598283|ref|ZP_17574283.1| GTP pyrophosphokinase [Bacillus cereus VD078]
gi|423660754|ref|ZP_17635923.1| GTP pyrophosphokinase [Bacillus cereus VDM022]
gi|423669987|ref|ZP_17645016.1| GTP pyrophosphokinase [Bacillus cereus VDM034]
gi|423673809|ref|ZP_17648748.1| GTP pyrophosphokinase [Bacillus cereus VDM062]
gi|228747683|gb|EEL97555.1| GTP pyrophosphokinase [Bacillus mycoides DSM 2048]
gi|401236553|gb|EJR43010.1| GTP pyrophosphokinase [Bacillus cereus VD078]
gi|401299114|gb|EJS04714.1| GTP pyrophosphokinase [Bacillus cereus VDM034]
gi|401300795|gb|EJS06384.1| GTP pyrophosphokinase [Bacillus cereus VDM022]
gi|401310175|gb|EJS15500.1| GTP pyrophosphokinase [Bacillus cereus VDM062]
Length = 727
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKAAETTGTLEKKLTWFRQILEWQNEA 375
>gi|254432294|ref|ZP_05045997.1| RelA/SpoT family protein [Cyanobium sp. PCC 7001]
gi|197626747|gb|EDY39306.1| RelA/SpoT family protein [Cyanobium sp. PCC 7001]
Length = 826
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 153/343 (44%), Positives = 211/343 (61%), Gaps = 11/343 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY++H V A LL IGA+++V+AAG LHD ++D ++ D + + FGA V LVE
Sbjct: 129 RASGEPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTEVTPDELEQHFGAEVRALVE 188
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL + + T +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 189 GVTKLGGI------HFTNKTEAQAENLRRMFLAMASDIRVVLVKLADRLHNMRTLAALKP 242
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K+ R A+ET EI+ PLANRLGI K +LE+L FK L P+ + ++ ++ C E
Sbjct: 243 EKQLRIARETREIYAPLANRLGIGRLKWELEDLAFKILEPEAYRDVQQQVATKRCEREER 302
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ L + L +S + GR K LY I KM +++ EI+D+ LR+I + +
Sbjct: 303 LGVTVQLLRERLAAVGLSACEVSGRPKHLYGIWSKMQRQQKAFHEIYDVAALRIICPSLD 362
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY++L VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH A
Sbjct: 363 GCYRSLAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTPEMHQVA 421
Query: 299 EFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQCEAMSKD 340
E+G AAHW+YKEG + + W R ++ WQ + S+D
Sbjct: 422 EYGIAAHWKYKEGGSPAAVGNDAERFNWLRQLVDWQKDGGSQD 464
>gi|423512518|ref|ZP_17489049.1| GTP pyrophosphokinase [Bacillus cereus HuA2-1]
gi|402449489|gb|EJV81326.1| GTP pyrophosphokinase [Bacillus cereus HuA2-1]
Length = 727
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|423558014|ref|ZP_17534316.1| GTP pyrophosphokinase [Bacillus cereus MC67]
gi|401191282|gb|EJQ98304.1| GTP pyrophosphokinase [Bacillus cereus MC67]
Length = 727
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|342218775|ref|ZP_08711379.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
gi|341588903|gb|EGS32275.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
Length = 737
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 213/336 (63%), Gaps = 11/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + A +LA + ++T + A LLHD ++D + + I FG VA LV+
Sbjct: 50 RVSGELYIVHPLAVAQILADMKIDATTITASLLHDVVEDTKYTLEEIEERFGKEVAFLVD 109
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L +E+ + + L MFLAMA D R V+IKLADRLHNM TL +
Sbjct: 110 GVTKLNRLDYRTKEDQ------QLNSLRKMFLAMAKDIRVVVIKLADRLHNMRTLRYMRS 163
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDEAM 178
K++R ++ETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +
Sbjct: 164 DKQKRISQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHAREEI 223
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V AI L++AL D +ISF + GR K LYSI+ KM K + +++D+Y +R+IV+ +
Sbjct: 224 VNDAITVLQKALADSHISFEI-NGRPKHLYSIYKKMKKDNRDLSQVYDLYAIRIIVDTVQ 282
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW +P + KDYI PK N YQSLHT V G P+E+QIRT EMH A
Sbjct: 283 DCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGSQGQPVEIQIRTWEMHHVA 342
Query: 299 EFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQ 333
E+G AAHWRYKEG + + + W R +L WQ
Sbjct: 343 EYGVAAHWRYKEGHANAGANEFDEKMGWLRNLLEWQ 378
>gi|124024494|ref|YP_001018801.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. MIT 9303]
gi|123964780|gb|ABM79536.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9303]
Length = 753
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 155/343 (45%), Positives = 208/343 (60%), Gaps = 11/343 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA+++V+AAG LHD ++D L+ + + FGA V +LV
Sbjct: 61 FRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDLTPEQLEDYFGAEVRELV 120
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + N T +A+ L MFLAMA D R VL+KLADRLHNM TL +L
Sbjct: 121 EGVTKLGGI------NFTNHTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTLGSLQ 174
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++ E
Sbjct: 175 ADKQQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQQEVATKRSEREN 234
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +E L + L + + GR K LY I KM +++ EI D+ LR+I +
Sbjct: 235 RLATTVELLTERLAAAGLDACEVSGRPKHLYGIWSKMQRQQKAFHEIFDVAALRIIAPSV 294
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI K NGYQSLHT V G+ P+EVQIRT MH
Sbjct: 295 ETCYRALAVVHDTFRPIPGRFKDYIGLAKPNGYQSLHTAVIGKHR-PIEVQIRTPGMHRV 353
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
+EFG AAHW YKEG ++ + W R ++ WQ E + D
Sbjct: 354 SEFGIAAHWEYKEGGSPAAANK-ERFNWLRQLVEWQQEGGNDD 395
>gi|423452296|ref|ZP_17429149.1| GTP pyrophosphokinase [Bacillus cereus BAG5X1-1]
gi|423470622|ref|ZP_17447366.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-2]
gi|401139934|gb|EJQ47491.1| GTP pyrophosphokinase [Bacillus cereus BAG5X1-1]
gi|402436288|gb|EJV68320.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-2]
Length = 727
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKAAETTGTLEKKLTWFRQILEWQNEA 375
>gi|422301714|ref|ZP_16389079.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9806]
gi|389789226|emb|CCI14734.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9806]
Length = 765
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 209/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEARFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLT 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + ++ S K ++
Sbjct: 179 SQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRQVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 EARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L +VH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|384440422|ref|YP_005655146.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
gi|359291555|gb|AEV17072.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
Length = 726
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 226/365 (61%), Gaps = 26/365 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +LA++ ++ VAAGLLHDT++D ++ + + R FG GV +V
Sbjct: 41 LRKSGEPYITHPVAVAEILASLRMDAETVAAGLLHDTVEDCGVAPEELERRFGPGVRRIV 100
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EG +K+S+L KLA N + A+ L MF+AMA D R +++KLADRLHN+ TL+ +P
Sbjct: 101 EGETKVSKLYKLA---NLEGEEKRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++R A+ETLEI+ PLA+RLGI K +LE+L F++L+P+ + L S++ E + E
Sbjct: 158 PHKQRRIAQETLEIYAPLAHRLGIGQLKWELEDLSFRYLHPEAYHALLSRIQETQEARER 217
Query: 178 MVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
++ A+ LE+AL+ + + GR K LYSI KM ++ +++I+D+ +R+
Sbjct: 218 VIHRAMAILEEALRKDELLQAQLQGFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRV 277
Query: 233 IVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 279
I++ ++ CY L +VH LW +PG++KDYI PK NGYQSLHT V
Sbjct: 278 ILDPKPAPTEEGQALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIA 337
Query: 280 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 339
+PLEVQIRT+EMH AE+G AAHW YKEG V + + W R + WQ E S
Sbjct: 338 LEGLPLEVQIRTREMHRVAEYGIAAHWLYKEG-LTDPEEVKRRISWLRSIQEWQQE-FSS 395
Query: 340 DRSCV 344
R V
Sbjct: 396 SREFV 400
>gi|229062102|ref|ZP_04199427.1| GTP pyrophosphokinase [Bacillus cereus AH603]
gi|228717254|gb|EEL68929.1| GTP pyrophosphokinase [Bacillus cereus AH603]
Length = 727
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEA 375
>gi|158320743|ref|YP_001513250.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus oremlandii OhILAs]
gi|158140942|gb|ABW19254.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus oremlandii OhILAs]
Length = 724
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 149/338 (44%), Positives = 207/338 (61%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y +H VE A +L + +++ + AGLLHD ++D YD + FG +ADLVE
Sbjct: 38 RKSGEDYFIHPVEVARILIDLQMDASTIVAGLLHDVIEDTEYGYDMVKEEFGVEIADLVE 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+++LS ++E +A+ L M LAMA D R +LIKLADRLHNM TL
Sbjct: 98 GVTKITRLSFNSKEER------QAENLRKMVLAMAKDIRVILIKLADRLHNMRTLKFQNP 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A ETLEIF P+ANRLGIS K +LE++C ++++P + +L K+ + E
Sbjct: 152 EKQKEKATETLEIFAPIANRLGISRIKWELEDICLRYIDPQGYYDLVEKVSQKRKDRENF 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ IE L + L+D +I + GR K YSI+ KM + + DEI D +R+IV + +
Sbjct: 212 ISDIIETLREKLEDFDIENEI-TGRPKHFYSIYRKMTYQGKSFDEIFDFMAVRVIVNSVK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VVH +W +PG+ KDYI PK N YQSLHT V G P E+QIRT EMH A
Sbjct: 271 DCYGVLGVVHTIWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGDPFEIQIRTFEMHQIA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQCE 335
E+G AAHW+YKEG + M + W R +L W+ E
Sbjct: 331 EYGIAAHWKYKEGRTETVEQQNDMKLAWLRQMLEWEKE 368
>gi|433655146|ref|YP_007298854.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293335|gb|AGB19157.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 718
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 209/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE AM+L + + + +A+GLLHD ++D ++YD I FG +ADLV+
Sbjct: 38 RNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHDVIEDTSITYDDIKNEFGQEIADLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL + ++ +A+ + M +AMA D R ++IKLADRLHNM TL L
Sbjct: 98 GVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIMIKLADRLHNMRTLKYLSE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD + L K+ + E
Sbjct: 152 EKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDDYYSLVEKVAKKRKEREES 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+KL++ L + I V GR K YSI+ KM ++ T ++I+D+ +R+IV +
Sbjct: 212 IKELIDKLKEKLNEIGIKAEV-DGRPKHFYSIYKKMKQQNKTFEQIYDLMAVRVIVNTVK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT +MH A
Sbjct: 271 DCYGTLGAVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWDMHRTA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKEG F ++ W R +L WQ E
Sbjct: 331 EYGIAAHWKYKEGKSYEDEFDAKL-SWLRQLLEWQRE 366
>gi|15895542|ref|NP_348891.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
acetobutylicum ATCC 824]
gi|337737491|ref|YP_004636938.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Clostridium acetobutylicum DSM 1731]
gi|384459001|ref|YP_005671421.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
acetobutylicum EA 2018]
gi|15025278|gb|AAK80231.1|AE007728_10 RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolases
[Clostridium acetobutylicum ATCC 824]
gi|325509690|gb|ADZ21326.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Clostridium acetobutylicum EA 2018]
gi|336292295|gb|AEI33429.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Clostridium acetobutylicum DSM 1731]
Length = 740
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 214/350 (61%), Gaps = 19/350 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY+ H ++ A +LA +G + + + AG+LHD ++D SYD I F VADLV
Sbjct: 38 MRESGEPYISHPLDVACILAEMGMDMSTIVAGILHDVIEDTSYSYDDITEMFSKEVADLV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL +++ +E +AD + M LAMA D R +LIKLADRLHNM TL
Sbjct: 98 SGVTKLDKITYKTKEEQ------QADNVRKMLLAMAKDIRVILIKLADRLHNMRTLKFKR 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++ AKETL+I+ PLA+RLG+S K +LE+L F++L P ++ EL + E E
Sbjct: 152 EQKQKEKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLKPKEYYELVDLIAEKRVEREE 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ +E+L+ L+ I+ + GR K YSI+ KML K ++D+I D+ +R++V N
Sbjct: 212 YISKIVEELKLNLEASGITPDI-DGRPKHFYSIYRKMLNKSKSLDQIFDLTAVRILVNNI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY AL +VH ++ +PG+ KDYI PK N YQSLH+ V G P E+QIRT +MH
Sbjct: 271 KECYAALGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPEGKPFEIQIRTYDMHKT 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQ---------MVEWARWVLTWQCEAMS 338
AE+G AAHW+YKEG + + V Q + W R +L WQ E S
Sbjct: 331 AEYGIAAHWKYKEGTIESTQNVPQNKNANKDDTKLTWIREMLEWQRETPS 380
>gi|304316999|ref|YP_003852144.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778501|gb|ADL69060.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 718
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 209/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE AM+L + + + +A+GLLHD ++D ++YD I FG +ADLV+
Sbjct: 38 RNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHDVIEDTSITYDDIKNEFGQEIADLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL + ++ +A+ + M +AMA D R ++IKLADRLHNM TL L
Sbjct: 98 GVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIMIKLADRLHNMRTLKYLSE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD + L K+ + E
Sbjct: 152 EKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDDYYSLVEKVAKKRKEREES 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+KL++ L + I V GR K YSI+ KM ++ T ++I+D+ +R+IV +
Sbjct: 212 IKELIDKLKEKLNEIGIKAEV-DGRPKHFYSIYKKMKQQNKTFEQIYDLMAVRVIVNTVK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRT +MH A
Sbjct: 271 DCYGTLGAVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPFEIQIRTWDMHRTA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKEG F ++ W R +L WQ E
Sbjct: 331 EYGIAAHWKYKEGKSYEDEFDAKL-SWLRQLLEWQRE 366
>gi|113476259|ref|YP_722320.1| (p)ppGpp synthetase I SpoT/RelA [Trichodesmium erythraeum IMS101]
gi|110167307|gb|ABG51847.1| (p)ppGpp synthetase I, SpoT/RelA [Trichodesmium erythraeum IMS101]
Length = 750
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 211/348 (60%), Gaps = 16/348 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G +ST++AAGLLHD ++D + + I FG+ V LVE
Sbjct: 59 RKSGEPYICHPVAVAGLLKYLGGDSTMIAAGLLHDIVEDTDVKIEEIEEKFGSEVTLLVE 118
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N ++KT ++A+ MFLAMA D R +++KLADRLHNM TL LP
Sbjct: 119 GVTKLSKF-------NFSNKTELQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLQHLP 171
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ A ET EIF PLANRLGI K +LE+L FK+L P+ + E+ + + EA
Sbjct: 172 SHKQLSKALETREIFAPLANRLGIGRIKWELEDLSFKYLEPNAYREIQELVADKRVDREA 231
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E L Q L I + GR K LY I+ KM K+ E++DI GLR+IVE
Sbjct: 232 RLLKMTENLRQKLDRLGIECYDISGRPKHLYGIYRKMYLKQKEFHEVYDISGLRIIVEKR 291
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
EDCY+ L +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH
Sbjct: 292 EDCYRTLAIVHDSYRPIPGRFKDYIGLPKPNRYQSLHTGVIGITGRPVEVQIRTVEMHHV 351
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL----QMVEWARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE +++ + + W R +L WQ + + DR
Sbjct: 352 AEYGIAAHWKYKETGYSNTNVNITTEDEKFTWLRQLLEWQSD-LKDDR 398
>gi|317968168|ref|ZP_07969558.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. CB0205]
Length = 786
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 211/346 (60%), Gaps = 15/346 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASG+PY+ H V A LL IGA++ V+AAG LHD ++D ++ + I + FG+ V LV
Sbjct: 87 VRASGEPYICHPVAVADLLRDIGASAGVIAAGFLHDVVEDTEVTPEEIEQHFGSEVRGLV 146
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVLIKLADRLHNMMTLDALP 119
EGV+KL + + T +A+ L MFLAM +D R VL+KLADRLHNM TL AL
Sbjct: 147 EGVTKLGGI------HFTNKTEAQAENLRRMFLAMVSDIRVVLVKLADRLHNMRTLGALK 200
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP----DQHTELSSKLVECFD 175
K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P D ++SSK + +
Sbjct: 201 PEKQQRIARETREIYGPLANRLGIGRFKWELEDLAFKILEPEAFRDVQQQVSSKRSDREE 260
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
VT+ I L L + + GR K LY I KM ++ EI+D+ LR+I
Sbjct: 261 RLGVTADI--LSGKLSSVGLGECEVSGRPKHLYGIWNKMQTQRKAFHEIYDVAALRIICP 318
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 319 NVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTAEMH 377
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFV-LQMVEWARWVLTWQCEAMSKD 340
AEFG AAHW+YKEG ++ + W R ++ WQ + + +D
Sbjct: 378 RVAEFGIAAHWKYKEGGSPAATGSDAERFNWLRQLVDWQKDGVGED 423
>gi|297616954|ref|YP_003702113.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophothermus lipocalidus DSM
12680]
gi|297144791|gb|ADI01548.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophothermus lipocalidus DSM
12680]
Length = 724
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 210/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A++LA + ++ + A LLHD ++D ++ + + FG VA LV+
Sbjct: 38 RISGEPYVCHPLAVAIILAELELDAATLIAALLHDVVEDTEVTLEEVKLQFGEEVALLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L +++E +A+ L MFLAMA D R ++IKLADRLHNM TL P
Sbjct: 98 GVTKLGKLEFMSKEE------AQAENLRKMFLAMAKDIRVLIIKLADRLHNMRTLVYQPE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K+ A+ETLEIFVPLA+RLGI +K +LE+L F +L PD + EL+ +L E
Sbjct: 152 RKQVEIAEETLEIFVPLAHRLGIFRFKWELEDLSFLYLEPDTYYELARRLKAKRKEREEY 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I ++ L+ I + GR K+LYSI+ KMLK+ +DEI+D +R++V+
Sbjct: 212 VHELIARIRAELQKIGIEADI-AGRPKNLYSIYTKMLKQGKDLDEIYDKIAIRVLVDTVR 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H LW +PG+ KDYI PK N YQSLHT + G G P EVQIRT EMH A
Sbjct: 271 DCYGVLGIIHTLWKPLPGRFKDYIAMPKPNMYQSLHTTLIGRGGEPFEVQIRTWEMHRTA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEG + S ++ W R +L WQ E
Sbjct: 331 EYGIAAHWRYKEGKTKTSDLDEKLA-WLRQMLEWQQE 366
>gi|75760574|ref|ZP_00740607.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491943|gb|EAO55126.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 727
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/344 (43%), Positives = 209/344 (60%), Gaps = 21/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLH+ V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHSTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQCEA 336
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKELTWFRQILEWQNEA 375
>gi|229163355|ref|ZP_04291307.1| GTP pyrophosphokinase [Bacillus cereus R309803]
gi|228620136|gb|EEK77010.1| GTP pyrophosphokinase [Bacillus cereus R309803]
Length = 727
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/455 (38%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEVTLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGI+T K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGINTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEFGIAAHWAYKEGKAAETTGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMV-TLDYKLKTGDIIEI 451
>gi|289523398|ref|ZP_06440252.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503090|gb|EFD24254.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 764
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/341 (43%), Positives = 208/341 (60%), Gaps = 17/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RA+G+PY++H + A +L+ + + + A LLHD ++D +++ + FG VA LV+
Sbjct: 89 RATGEPYVVHVLSVAGILSDVNIDVETLVAALLHDVIEDTDSTFEEVKAKFGTNVAVLVD 148
Query: 62 GVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDA 117
GV+KL N KTVE A+ L MFL MA D R VLIKLADRLHNM T+
Sbjct: 149 GVTKL---------GNIDFKTVEDYQAENLRKMFLVMAKDIRVVLIKLADRLHNMRTIQV 199
Query: 118 LPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--D 175
L K+ R A+ETLEI+ PLA+RLGI K +LE+L FK L PD + E+ ++ +
Sbjct: 200 LRREKQLRIARETLEIYAPLAHRLGIYHMKRELEDLAFKVLEPDMYYEIRRRVRKKLPER 259
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA++ AI+ L + L + I + GR K YSI+ KM +K LT+++++D+ LR+I
Sbjct: 260 EAIIKEAIDALSKKLDEGGIRAFI-TGRAKHFYSIYEKMKRKNLTIEQMYDLLALRVITN 318
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ DCYQ L +VH +W +PG+ DYI PK N YQSLHT V G PLEVQIRT +MH
Sbjct: 319 SVVDCYQVLGIVHTIWKPIPGQFDDYIANPKSNMYQSLHTTVVGPSGEPLEVQIRTWDMH 378
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKEG + ++ W R VL Q ++
Sbjct: 379 WIAEYGIAAHWRYKEGQIKPDDLDTKLT-WIRQVLETQLDS 418
>gi|434400053|ref|YP_007134057.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
gi|428271150|gb|AFZ37091.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
Length = 745
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 206/340 (60%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G +S +AAG LHD ++D ++ + I FG V LVE
Sbjct: 55 RKSGEPYIAHPVAVAGLLRDLGGDSVTIAAGFLHDVVEDTEVTPEEIEERFGTDVRQLVE 114
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFL+MA D R +++KLADRLHNM TL+ L
Sbjct: 115 GVTKLSKF-------NFSSKTERQAENFRRMFLSMAKDIRVIVVKLADRLHNMRTLEHLK 167
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+QR A ET EIF PLANRLGI +K +LE+L FK+L P+ + E+ + + E E
Sbjct: 168 PEKQQRIALETREIFAPLANRLGIGRFKWELEDLSFKYLEPEAYREIQALVAERRTDRET 227
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E + L+ ++ L GR K LY I+ KM +++ EI DI +R+IVE
Sbjct: 228 RIDKVTEIIRSRLQKLGVNVFELKGRPKHLYGIYQKMQRQQKEFHEIFDIAAVRIIVETN 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY++L VVH + +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 288 EECYRSLAVVHDAFKPIPGRFKDYIGLPKPNRYQSLHTTVVGLNGRPLEIQIRTLEMHHI 347
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
AE+G AAHW+YKE ++ + W R +L WQ +
Sbjct: 348 AEYGIAAHWKYKETGSSNTRLNSDDEKFTWLRQLLEWQND 387
>gi|440755832|ref|ZP_20935033.1| relA/SpoT family protein [Microcystis aeruginosa TAIHU98]
gi|440173054|gb|ELP52512.1| relA/SpoT family protein [Microcystis aeruginosa TAIHU98]
Length = 765
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 209/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEARFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLN 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + + S K ++
Sbjct: 179 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRTVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E+ + + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 ESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L VVH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSQTTLTAEDEKFAWLRNLLDWQ 396
>gi|425460758|ref|ZP_18840239.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9808]
gi|389826500|emb|CCI22900.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9808]
Length = 765
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 209/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEARFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLN 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + + S K ++
Sbjct: 179 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRTVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E+ + + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 ESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L VVH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|159029396|emb|CAO90772.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 789
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 209/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 90 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEDRFGVEVRNLVE 149
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 150 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLN 202
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + + S K ++
Sbjct: 203 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRTVQLLVSEKRID--R 260
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E+ + + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 261 ESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 320
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L VVH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 321 TKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 380
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 381 HVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 420
>gi|229192618|ref|ZP_04319579.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
gi|228590925|gb|EEK48783.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
Length = 727
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/455 (38%), Positives = 246/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AEFG AAHW YKEG ++ L+ + W R +L WQ E
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNET---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMV-TLDYKLKTGDIIEI 451
>gi|433444159|ref|ZP_20409169.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
gi|432001807|gb|ELK22676.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
Length = 732
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 207/337 (61%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + +AAG LHD ++D ++ + + R FG VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPATIAAGFLHDVVEDTHVTKEDLEREFGKEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MFLAMA D R +LIKLADRLHNM TL LP+
Sbjct: 104 GVTKLGKIKYKSHEEQ------QAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPI 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+++ L++ I + GR K +YSI+ KM+ + +EI+D+ +R+IVE+ +
Sbjct: 218 LEEVIQEMRARLQEVGIQ-AEISGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIVESIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVVGPKGEPLEVQIRTFEMHHIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
EFG AAHW YKEG + + + W R ++ WQ E
Sbjct: 337 EFGIAAHWAYKEGKTIRPNTFEEKLAWFREIVEWQNE 373
>gi|239827847|ref|YP_002950471.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. WCH70]
gi|239808140|gb|ACS25205.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. WCH70]
Length = 732
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 209/338 (61%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + +AAG LHD ++D + + + R FG+ VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLKMDPATIAAGFLHDVVEDTEATKEDLEREFGSEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MFLAMA D R +LIKLADRLHNM TL LP+
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPI 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+++ + L + +I + GR K +YSI+ KM+ + +EI+D+ +R+IV + +
Sbjct: 218 LEEVIQEVRERLNEVSIP-CEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTFEMHQIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 337 EFGIAAHWAYKEGKTIKPNSFEEKLSWFREILEWQNDA 374
>gi|222529929|ref|YP_002573811.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor bescii DSM
6725]
gi|222456776|gb|ACM61038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor bescii DSM
6725]
Length = 726
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 216/340 (63%), Gaps = 16/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H +E A++LA + + + AGLLHD ++D S + + R FG +A+LV+
Sbjct: 44 RNSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSASLEDVEREFGKEIAELVD 103
Query: 62 GVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDA 117
GV+KL +L SKL R+ A+ M +AMA D R +LIKLADRLHNM TL
Sbjct: 104 GVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIRVILIKLADRLHNMRTLKY 154
Query: 118 LPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFD 175
LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+P+ + +L K+ +
Sbjct: 155 LPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVER 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + I + + LK+ NI + GR K YSI+ KM ++ T++EI+D++ +R+IV
Sbjct: 215 EEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIVN 274
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V G P EVQIRT +MH
Sbjct: 275 SVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPFEVQIRTFDMH 334
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 335 RTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 373
>gi|425452480|ref|ZP_18832297.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 7941]
gi|389765685|emb|CCI08474.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 7941]
Length = 765
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 209/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEARFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLN 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + + S K ++
Sbjct: 179 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRTVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E+ + + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 ESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L VVH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSQTTLTAEDEKFAWLRNLLDWQ 396
>gi|147677380|ref|YP_001211595.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Pelotomaculum thermopropionicum SI]
gi|146273477|dbj|BAF59226.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Pelotomaculum thermopropionicum SI]
Length = 765
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 205/335 (61%), Gaps = 11/335 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P+++H +E A +LA + + + AGLLHD ++D ++ I FG A LV+
Sbjct: 75 RFSGEPFIVHPLEVAKILAELELDQETLVAGLLHDVVEDTGVTLQDIREQFGVETALLVD 134
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G +KLS++ ++E ++A+ L MFLAMA D R +LIKLADRLHN+ TL P
Sbjct: 135 GTTKLSRIEYKSKEE------LQAENLRKMFLAMAKDIRVILIKLADRLHNLRTLKYHPE 188
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ A ETLEIF PLA+RLGI K +LE+L F+ PD++ EL +K+ D E
Sbjct: 189 PKQVEIANETLEIFAPLAHRLGIYRIKWELEDLSFRFKEPDRYFELVNKIASTRDKREEY 248
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ S I L L++ I + GR K YSI+ KM++++ ++EI D+ +R +VE
Sbjct: 249 IRSVISILAGKLEEVGIEAEI-QGRPKHFYSIYAKMIEQQKDLNEIFDVMAVRCLVETVR 307
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH +W +PG+ KDYI PK N YQSLHT V G PLE+QIRT+EMH A
Sbjct: 308 DCYATLGIVHTMWTPIPGRFKDYIAMPKSNMYQSLHTTVIGPQGEPLEIQIRTREMHRTA 367
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG F ++ W R +L WQ
Sbjct: 368 EYGIAAHWRYKEGGRSDREFDKKLA-WLRQLLEWQ 401
>gi|158335664|ref|YP_001516836.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
gi|158305905|gb|ABW27522.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
Length = 753
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 210/342 (61%), Gaps = 15/342 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ H V A LL +G ++ ++AAG LHD ++D ++ + I FG V LVE
Sbjct: 56 RASGEPYIAHPVSVAELLRDLGGSAAMIAAGFLHDVVEDTDVTPETIEAEFGLEVRQLVE 115
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N ++KT EA+ MFLAMA D R +++KLADRLHNM TL+ LP
Sbjct: 116 GVTKLSKF-------NFSTKTEREAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEHLP 168
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A+ET ++F PLANRLGI +K +LE+L FK+L PD + + + + E
Sbjct: 169 PVKQRRIAQETRDVFAPLANRLGIWRFKWELEDLAFKYLEPDTYRRMQQLVADKRTDRED 228
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ AI L L+ L + GR K L+SI KM +++ EI+D+ +R+IV+
Sbjct: 229 HIEQAITILHDRLEPICSKHLEISGRPKHLFSISQKMERQQKEFHEIYDVAAVRVIVKTN 288
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH + +PG+ KDYI PK N YQSLHTVV G G PLEVQIRT+ MH
Sbjct: 289 EECYRALAVVHDCFRPIPGRFKDYIGLPKSNRYQSLHTVVIGLGGRPLEVQIRTEAMHHI 348
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL----QMVEWARWVLTWQCE 335
AE+G AAHW+YKE Q + W R +L WQ +
Sbjct: 349 AEYGIAAHWKYKESSNQPGKAAWSPDDEKFTWLRQLLEWQSD 390
>gi|116072003|ref|ZP_01469271.1| metal dependent phosphohydrolase [Synechococcus sp. BL107]
gi|116065626|gb|EAU71384.1| metal dependent phosphohydrolase [Synechococcus sp. BL107]
Length = 776
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 206/344 (59%), Gaps = 11/344 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDPY++H V A LL IGA++ V+AAG LHD ++D +S + I FG+ V +LV
Sbjct: 84 FRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTDVSLEEIQAHFGSEVRELV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + R +A+ L MF+AMA D R VL+KLADR+HNM T+ AL
Sbjct: 144 EGVTKLGGIHFNDRTE------AQAENLRRMFMAMASDIRVVLVKLADRVHNMRTIGALK 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++ E
Sbjct: 198 EEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQQEVATKRSEREQ 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + L + L+ + + GR K LY I KM +++ EI+D+ LR+ +
Sbjct: 258 RLGVTVGLLNERLQRAGLEGCEVSGRPKHLYGIWSKMERQQKAFHEIYDVAALRITTPSV 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 318 ETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTLEMHQV 376
Query: 298 AEFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQCEAMSKD 340
AEFG AAHW+YKEG S + W R ++ WQ E + D
Sbjct: 377 AEFGIAAHWKYKEGGSPASCGSDAERFNWLRQLVDWQQEGGNDD 420
>gi|239624473|ref|ZP_04667504.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47_FAA]
gi|239520859|gb|EEQ60725.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47FAA]
Length = 765
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 219/337 (64%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D ++ D + + FG+ V+ LV+
Sbjct: 66 RKSGEPYIIHPLCVAIVLADLEMDKETIAAGLLHDVVEDTIMTLDQLTKEFGSEVSFLVD 125
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QL+ + ++AD L MFLAMA D R ++IKLADRLHNM T
Sbjct: 126 GVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKP 180
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAM 178
K++ A+ET+EI+ P+A+RLGIS K++L++L K L PD + +L K L + EA
Sbjct: 181 EKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLKPDVYYDLVEKVDLRKDAREAF 240
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +++++ +K+ + V GR K +SI+ KM+ + T+D+I+D++ +R++V+N +
Sbjct: 241 VQEIVDEVKNHMKEAGVDATV-GGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVDNVK 299
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 300 DCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPFEIQIRTYEMHRTA 359
Query: 299 EFGFAAHWRYKE-GDCQHSSFVLQM-VEWARWVLTWQ 333
E+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 360 EYGIAAHWKYKESGSGQVAAGSEEAKLSWLRQILEWQ 396
>gi|425470826|ref|ZP_18849686.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9701]
gi|389883416|emb|CCI36194.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9701]
Length = 765
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 208/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEARFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLN 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + + S K ++
Sbjct: 179 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRAVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 EARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L VVH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|312110098|ref|YP_003988414.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|336234522|ref|YP_004587138.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719137|ref|ZP_17693319.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215199|gb|ADP73803.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|335361377|gb|AEH47057.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368040|gb|EID45315.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 731
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 209/338 (61%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + +AAG LHD ++D + + + R FG+ VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLKMDPATIAAGFLHDVVEDTEATKEDLEREFGSEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MFLAMA D R +LIKLADRLHNM TL LP+
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPI 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+++ + L + +I + GR K +YSI+ KM+ + +EI+D+ +R+IV + +
Sbjct: 218 LEEVIQEVRERLNEVSIP-CEIYGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTFEMHQIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 337 EFGIAAHWAYKEGKTIKPNSFEEKLSWFREILEWQNDA 374
>gi|427412621|ref|ZP_18902813.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
gi|425716428|gb|EKU79412.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
Length = 744
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/342 (44%), Positives = 210/342 (61%), Gaps = 10/342 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+LH + A +LA + ++T V A LLHD ++D + I FG VA LV+
Sbjct: 57 RASGEPYILHPLAVATILANLQIDATTVIAALLHDVVEDTEYTLPQIEELFGKEVAFLVD 116
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 117 GVTKLNQFQYHTKEDQ------QLENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRS 170
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDEAM 178
K++R A+ETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ E E +
Sbjct: 171 DKQKRIAQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVEQMQEKRHVREEI 230
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E+L++AL+D +I V GR K YSI+ KM K + +I+D+Y +R+IV+
Sbjct: 231 VNDTMEQLKKALEDAHIKADV-KGRPKHFYSIYKKMKKDNRDLSQIYDLYAVRVIVDTIP 289
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW +P + KDYI PK N YQSLHT + G +E+QIRT EMH +
Sbjct: 290 DCYAVLGIVHNLWKPLPYRFKDYIAMPKSNMYQSLHTTIIGTMGHSVEIQIRTWEMHRVS 349
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
E+G AAHWRYKEG+ Q V W R VL WQ + K+
Sbjct: 350 EYGVAAHWRYKEGNKGGDKDFDQKVGWLRQVLEWQDASNPKE 391
>gi|357054508|ref|ZP_09115592.1| hypothetical protein HMPREF9467_02564 [Clostridium clostridioforme
2_1_49FAA]
gi|355384480|gb|EHG31545.1| hypothetical protein HMPREF9467_02564 [Clostridium clostridioforme
2_1_49FAA]
Length = 761
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 218/337 (64%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D ++ + + + FG+ V+ LV+
Sbjct: 62 RKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTIMTLEQLTKEFGSEVSFLVD 121
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QL+ + ++AD L MFLAMA D R ++IKLADRLHNM T
Sbjct: 122 GVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKP 176
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A+ET+EI+ P+A+RLGIS K++L++L K L PD + +L K+ D EA
Sbjct: 177 EKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLQPDVYYDLVEKVALRKDTREAF 236
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +++++ ++D I V GR K +SI+ KM+ + T+D+I+D++ +R++VE +
Sbjct: 237 VQEIVDEVKSHMEDAGIEATV-GGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVETVK 295
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 296 DCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPFEIQIRTYEMHRTA 355
Query: 299 EFGFAAHWRYKE-GDCQHSSFVLQM-VEWARWVLTWQ 333
E+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 356 EYGIAAHWKYKESGSGQVAAGSAEAKLSWLRQILEWQ 392
>gi|302872388|ref|YP_003841024.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
gi|302575247|gb|ADL43038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
Length = 722
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 216/340 (63%), Gaps = 16/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY++H +E A++LA + + + AGLLHD ++D S + I R FG +A+LV+
Sbjct: 40 RSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSASLEDIEREFGKEIAELVD 99
Query: 62 GVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDA 117
GV+KL +L SKL R+ A+ M +AMA D R +LIKLADRLHNM TL
Sbjct: 100 GVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIRVILIKLADRLHNMRTLKY 150
Query: 118 LPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFD 175
LP K+++ A+ET++I+ PL +RLGIS K +LE+L ++L+P+ + +L K+ +
Sbjct: 151 LPPEKQRQKAQETIDIYAPLVHRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVER 210
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + I + + LK+ NI + GR K YSI+ KM ++ T++EI+D++ +R+IV
Sbjct: 211 EEYIKRIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIVN 270
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V G P EVQIRT +MH
Sbjct: 271 SVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPFEVQIRTFDMH 330
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 331 RTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 369
>gi|72162489|ref|YP_290146.1| RelA/SpoT protein [Thermobifida fusca YX]
gi|71916221|gb|AAZ56123.1| RelA/SpoT protein [Thermobifida fusca YX]
Length = 814
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 210/342 (61%), Gaps = 20/342 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G +AAGLLHDT++D + D + FG +A+LV+
Sbjct: 132 RKSGDPYITHPLAVATILAELGMQEATIAAGLLHDTVEDTEYTLDQLRSDFGDEIAELVD 191
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AMA D R ++IKL DRLHNM TL LP
Sbjct: 192 GVTKLDKVKY--------GEATQAETVRKMVVAMARDIRVLVIKLCDRLHNMRTLRYLPQ 243
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
KR++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E++ + E +
Sbjct: 244 AKREKKARETLEIYAPLAHRLGMNTIKWELEDLAFATLYPKRFDEIARLVAERAPRRDVY 303
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IE + L++ I V GR K YSI+ KM+ + + DEI+D+ G+R+IV++
Sbjct: 304 LQEVIEIVSADLREAKIKATVR-GRPKHYYSIYQKMIARNVGFDEIYDLVGIRVIVDSVR 362
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL ++H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT+ MH +A
Sbjct: 363 DCYAALGIIHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPEGSPVELQIRTRAMHRRA 422
Query: 299 EFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKE G + +S + W R ++ WQ E
Sbjct: 423 EYGIAAHWKYKEERNNGGKAKGASTDMA---WLRQLIDWQQE 461
>gi|379012030|ref|YP_005269842.1| GTP pyrophosphokinase RelA [Acetobacterium woodii DSM 1030]
gi|375302819|gb|AFA48953.1| GTP pyrophosphokinase RelA [Acetobacterium woodii DSM 1030]
Length = 723
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 211/337 (62%), Gaps = 13/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H V A +LA + ++ + A +LHD ++D SYDYI F +A+LVE
Sbjct: 45 RLSGEDYVIHPVSVAYILAEMQMDTETIVAAILHDVIEDTIYSYDYIKEEFNETIANLVE 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ ++E + +A+ L M LAM+ D R +LIKL DRLHNM TL+ +
Sbjct: 105 GVTKIGRIGFQSKEES------QAENLRKMILAMSKDIRVILIKLVDRLHNMRTLEYMRE 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K+ AKETL+I+ PLANRLGIST K +LE+L K+L+PD + +L K+ + EA
Sbjct: 159 TKQIEKAKETLDIYAPLANRLGISTIKWELEDLALKYLDPDGYYDLVHKIKVKKSAREAY 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L + + +K + + GR K YSI+ KM + + DEI+D+ +R+IV++ +
Sbjct: 219 IADVIAVLAKEI-EKVGTHAEIYGRSKHFYSIYRKMKSQNRSFDEIYDLIAVRVIVDSLK 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH W +PG+ KDYI PK N YQS+HT V G P E+QIRT+EMH A
Sbjct: 278 DCYGVLGIVHSQWTPIPGRFKDYIAMPKPNLYQSIHTTVMGPKGEPFEIQIRTREMHETA 337
Query: 299 EFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW+YKEG D + + + +QM W R +L Q
Sbjct: 338 EYGIAAHWKYKEGRMDAKDNKYEVQM-SWLRQMLELQ 373
>gi|18310920|ref|NP_562854.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
gi|18145602|dbj|BAB81644.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
Length = 726
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 217/343 (63%), Gaps = 15/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + AM+LA +G ++ + AGLLHD ++D +Y+ I F VA+LV+
Sbjct: 37 RESGEPYITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +AD + M LAMA D R ++IKLADRLHNM TL +
Sbjct: 97 GVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKP 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P+++ +L + + E E
Sbjct: 151 EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKF 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ I++L++ L NI + GR K YSI+ KM+ K ++++I D+ +R++V +
Sbjct: 211 ISRIIKELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRILVNTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EMH A
Sbjct: 270 DCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKTFEIQIRTFEMHRTA 329
Query: 299 EFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEAM 337
E+G AAHW+YK G D + +F ++ W R +L WQ EA+
Sbjct: 330 EYGIAAHWKYKSGINGTDSKDMTFENKLT-WLRDILEWQKEAV 371
>gi|150390117|ref|YP_001320166.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus metalliredigens QYMF]
gi|149949979|gb|ABR48507.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus metalliredigens
QYMF]
Length = 727
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 204/336 (60%), Gaps = 11/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y +H VE A +L + +S+ +AAGLLHD ++D Y + FG VA+LVE
Sbjct: 37 RKSGEQYFIHPVEVAKILIELKMDSSTIAAGLLHDVIEDTPYGYGKVREEFGEEVAELVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++LS ++E +A+ L MF+AMA D R VLIKLADRLHNM TL
Sbjct: 97 GVTKLTRLSFESKEER------QAENLRKMFIAMAKDIRVVLIKLADRLHNMRTLKYQSD 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A ETLEIF P+A+RLGIS K +LE+LC +++P+ + +L K+ + E
Sbjct: 151 EKKKEKAMETLEIFAPIAHRLGISRIKWELEDLCLLYIDPEGYYDLVDKVAKKRRDRETF 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L+ + + I + GR K YSI+ KM+ + + DEI D R+IV N +
Sbjct: 211 INKVISILDGKMDEFGIENEI-SGRPKHFYSIYRKMVYQNKSFDEIFDFIAFRVIVNNVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P E+QIRTKEMH A
Sbjct: 270 DCYGILGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPNGEPFEIQIRTKEMHQIA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQ 333
EFG AAHW YKEG ++ + + W R +L W+
Sbjct: 330 EFGIAAHWSYKEGKSINNEDDMDTKLTWLRQMLEWE 365
>gi|433604288|ref|YP_007036657.1| putative GTP pyrophosphokinase [Saccharothrix espanaensis DSM
44229]
gi|407882141|emb|CCH29784.1| putative GTP pyrophosphokinase [Saccharothrix espanaensis DSM
44229]
Length = 766
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 208/340 (61%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S D + FG VA LV+
Sbjct: 80 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSLDQLRVDFGNEVALLVD 139
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ A EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 140 GVTKLDKVKLGA--------AAEAETIRKMVIAMAKDPRVLVIKLADRLHNMRTMRFLPP 191
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + +
Sbjct: 192 EKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVANRAPSRDTY 251
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ I +L L+ I+ V GR K YSIH KM+ + D+IHD+ G+R+ V+
Sbjct: 252 LSGVINELSSQLEGARITAKV-EGRPKHYYSIHQKMIVRGRDFDDIHDLVGVRIQVDEVR 310
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT +MH A
Sbjct: 311 DCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTYDMHRTA 370
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H+ +++ E W R +L WQ EA
Sbjct: 371 EYGIAAHWRYKETRGTHTGKGVEVDEMAWMRQLLDWQREA 410
>gi|347542568|ref|YP_004857205.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985604|dbj|BAK81279.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 719
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 210/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R G+PY++H +E A +L+ + + + GLLHD ++D +Y I TFG VA LVE
Sbjct: 36 RIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEFTYSDISATFGEEVAILVE 95
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +++ +E +AD + M +AM D R +LIKLADRLHNM TL L
Sbjct: 96 GVSKLDKINYKTKEE------AQADNIRKMLMAMTKDIRVILIKLADRLHNMRTLKYLSE 149
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD++ ++ + E D E +
Sbjct: 150 YKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDEYYRIAKLVSEKRDDREKL 209
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
I++ ++ L +++ V+ GR K LYSI+ K+++K T+DEI D+ +R+IV++ +
Sbjct: 210 TNEIIKEFKEVLNQSDVN-AVIEGRPKHLYSIYKKLIQKNKTIDEIFDLIAIRVIVDSIK 268
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H+ + + K KDYI PK N YQSLHT V +G P E+QIRTK+MH A
Sbjct: 269 DCYVALGLAHEKYNPISNKFKDYIAMPKSNNYQSLHTTVLTKGGKPFEIQIRTKKMHKVA 328
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAH++YKE F + V W R V+ W E
Sbjct: 329 ELGIAAHFKYKEQTDTKDRFDEKFV-WIREVVEWLTET 365
>gi|443659642|ref|ZP_21132391.1| relA/SpoT family protein [Microcystis aeruginosa DIANCHI905]
gi|443332660|gb|ELS47256.1| relA/SpoT family protein [Microcystis aeruginosa DIANCHI905]
Length = 739
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 209/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 40 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEDRFGVEVRNLVE 99
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 100 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLN 152
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + + S K ++
Sbjct: 153 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRTVQLLVSEKRID--R 210
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E+ + + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 211 ESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 270
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L VVH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 271 TKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 330
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 331 HVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 370
>gi|160936541|ref|ZP_02083908.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
BAA-613]
gi|158440332|gb|EDP18077.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
BAA-613]
Length = 761
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 218/337 (64%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D ++ + + + FG+ V+ LV+
Sbjct: 62 RKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTIMTLEQLTKEFGSEVSFLVD 121
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QL+ + ++AD L MFLAMA D R ++IKLADRLHNM T
Sbjct: 122 GVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKP 176
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A+ET+EI+ P+A+RLGIS K++L++L K L PD + +L K+ D EA
Sbjct: 177 EKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLQPDVYYDLVEKVALRKDTREAF 236
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +++++ ++D I V GR K +SI+ KM+ + T+D+I+D++ +R++VE +
Sbjct: 237 VQEIVDEVKSHMEDAGIESTV-GGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVETVK 295
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 296 DCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQPFEIQIRTYEMHRTA 355
Query: 299 EFGFAAHWRYKE-GDCQHSSFVLQM-VEWARWVLTWQ 333
E+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 356 EYGIAAHWKYKESGSGQVAAGSAEAKLSWLRQILEWQ 392
>gi|374307479|ref|YP_005053910.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
gi|291166507|gb|EFE28553.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
Length = 733
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 212/341 (62%), Gaps = 13/341 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H VE A +LA + + +AAGLLHD L+D ++Y+ + FG +ADLV+
Sbjct: 37 RKSGEKYIIHPVEVAKILAELEMDMDTIAAGLLHDVLEDTDMTYEEMASEFGTTIADLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL Q+ +++ ++A+ MF AM D R VLIKLADRLHNM T+ +P
Sbjct: 97 GVTKLGQIKYQSKQE------MQAENFRKMFFAMGKDIRVVLIKLADRLHNMRTMKYMPK 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAM 178
K +KET EI+ P+ANRLGI K ++E+L ++L+PD + EL+ K L E
Sbjct: 151 EKAIEKSKETAEIYAPIANRLGIFRIKWEMEDLALRYLDPDGYRELTEKVSLKRQEREKY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ S IE++E L++ +I+ + GR K YSI+ KM + T +EI+D+ +R+IV+N +
Sbjct: 211 IESVIEQIEVKLEENDIT-CDIKGRAKHFYSIYKKMKYQDKTFEEIYDLMAVRIIVDNIK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ +VH +W +P + KDYI PK N YQSLHT V G PLE+QIRT +M+ A
Sbjct: 270 DCYGAVGLVHTIWKPIPTRFKDYIAMPKPNMYQSLHTTVVGPDGEPLEIQIRTWDMNRIA 329
Query: 299 EFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE + + + + W R ++ WQ E
Sbjct: 330 EFGIAAHWKYKERFSANGNSDGEMEKKLSWIRQMMEWQKEV 370
>gi|427418396|ref|ZP_18908579.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 7375]
gi|425761109|gb|EKV01962.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 7375]
Length = 763
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/340 (45%), Positives = 212/340 (62%), Gaps = 11/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASG+PY+ H V A +L ++G +S ++AAG LHD ++D +S D I FGA V +V
Sbjct: 64 MRASGEPYIAHPVAVANILRSLGGDSAMIAAGFLHDVVEDTDVSADEIEAHFGAEVRQMV 123
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KLS+ + N+ ++ +A+ MFLAMA D R +++KLADRLHNM TL LP
Sbjct: 124 EGVTKLSKF-----QFNSKTER-QAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQHLP 177
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A ET+EIF PLANRLGI K +LE+L FK+L + E+ + + E EA
Sbjct: 178 PEKQVQKACETIEIFAPLANRLGIGRMKWELEDLSFKYLEESSYQEIKNLISEKRVDREA 237
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E LE L + I+ + + R K LYSI+ KM ++K +I+DI +R+IV +
Sbjct: 238 RLKQVAELLETHLTNDGINCVEISSRPKHLYSIYRKMQRQKKDFHQIYDIAAVRIIVSTK 297
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY+AL VVH + +PG+ KDYI PK N YQSLHT V GE P+EVQIRT EMH
Sbjct: 298 VECYRALAVVHDQFKPIPGRFKDYIGLPKANRYQSLHTAVIGEQGRPIEVQIRTMEMHHV 357
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
AE+G AAHW+YKE ++ + W R +L WQ +
Sbjct: 358 AEYGIAAHWKYKETGNSNTKVNAEDEKFTWLRQLLEWQSD 397
>gi|239908231|ref|YP_002954972.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
gi|239798097|dbj|BAH77086.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
Length = 740
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/405 (39%), Positives = 230/405 (56%), Gaps = 36/405 (8%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H +E A +LA + ++ +A+GLLHDT++D + D I FG VAD+V
Sbjct: 38 VRLSGEPYLSHPLEAAGILADMRLDAASIASGLLHDTVEDTKATVDEIEELFGEEVADIV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+K+S + +E +A+ + M LAMA D R VL+KLADRLHNM TL+
Sbjct: 98 DGVTKISLIPFETKEE------AQAENIRKMILAMAEDIRVVLVKLADRLHNMRTLEFQK 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+ A+ET++I+ PLANRLG+ K +LE+ F++L PD + +L + DE
Sbjct: 152 PHKQALIAQETMDIYAPLANRLGLHRIKTELEDWSFRYLKPDIYAQLVEGVATHHTVDET 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I L + L NI ++ GR K L+S+H KM + LT+D++HD+ R+IVE
Sbjct: 212 FIERVIGHLNELLGPNNIKARIV-GRRKHLWSVHNKMRVQGLTIDQVHDLVAFRVIVETI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY L +VH LW VPG+ KDYI+ PK N YQSLHT V G G +E+QIRT+EMH
Sbjct: 271 RECYHVLGLVHSLWKPVPGRFKDYISMPKANMYQSLHTTVVGPGGERIEIQIRTEEMHRL 330
Query: 298 AEFGFAAHWRYKEGD-CQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF 356
AE G AAHW+YKE + + + ++ +W R ++ WQ E + R V N F
Sbjct: 331 AEEGVAAHWKYKERERGKFNPKDVERFQWLRQIMDWQRE-LKDSREFVTN-------LRF 382
Query: 357 PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
D+ + + P K V+E P +T +DL
Sbjct: 383 DLFQDEV-YVFTP----------------KGDVKELPEGATAVDL 410
>gi|227499575|ref|ZP_03929682.1| GTP diphosphokinase [Anaerococcus tetradius ATCC 35098]
gi|227218334|gb|EEI83588.1| GTP diphosphokinase [Anaerococcus tetradius ATCC 35098]
Length = 726
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 211/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y +H + A L+ + + + AGL+HD L+D +S + + FG + LV+
Sbjct: 44 RNSGEDYFIHPIAVARKLSEMKLDDETICAGLMHDVLEDTDVSREQMAEVFGEEITFLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL L+ +RE +A+ + M +AM+ D R VLIKL+DRLHNM TL+ +
Sbjct: 104 GVTKLKNLNYTSREEK------QAENIRKMVMAMSNDVRVVLIKLSDRLHNMKTLEYMTR 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K+ + A ETLEI+VPLA+RLGI + K +LE+LCF++ P+++ EL+ + EA
Sbjct: 158 KKQIQIADETLEIYVPLAHRLGIYSLKWELEDLCFRYQEPEKYYELAEMVNVKRREREAY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+ L ++L NI+F + GR KSLYSI+ KM + + DEI+D+ +R+IV+
Sbjct: 218 INEIIDTLSKSLSGTNINFEI-SGRPKSLYSINKKMERNGIAFDEIYDLTAIRVIVDTIA 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY L VH LW +P ++KDYI +PK NGY+SLHT V GE P EVQIRT++MH +
Sbjct: 277 ECYAVLGKVHSLWRPIPNRIKDYIGQPKPNGYRSLHTTVFGEDSRPFEVQIRTRKMHKEC 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKE + S F M + R ++ WQ E
Sbjct: 337 EYGVAAHWRYKENNNTKSDFDDAM-SFLRRIVEWQQEG 373
>gi|294101598|ref|YP_003553456.1| (p)ppGpp synthetase I SpoT/RelA [Aminobacterium colombiense DSM
12261]
gi|293616578|gb|ADE56732.1| (p)ppGpp synthetase I, SpoT/RelA [Aminobacterium colombiense DSM
12261]
Length = 734
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 215/342 (62%), Gaps = 18/342 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SGDPY++H + A +LA + + + A LLHD L+D LS + + FG V LV+
Sbjct: 57 RSSGDPYVVHSINVASILADMQLDLVTLIAALLHDVLEDTALSAEKVKSAFGDDVITLVD 116
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L + E+ +A+ L MF+ MA D R VLIKLADRLHNM TL AL
Sbjct: 117 GVTKLGKLPFKSFED------YQAENLRKMFVVMAKDIRVVLIKLADRLHNMRTLGALRR 170
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 178
K+ R AKETLEI+ PLA+RLGI K LE+L FK+ +PD + E+ ++ + EA+
Sbjct: 171 DKQLRIAKETLEIYAPLAHRLGIYQVKRGLEDLAFKYSDPDMYYEIRRRVRKKLPEREAI 230
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AIE L+ LK ++I F V GR K YSI+ KM +KKL +++++D+ LR++V++
Sbjct: 231 IKKAIEILQDRLKQESIHFKV-KGRAKHFYSIYEKMNRKKLPVEQLYDLLALRVVVDDVA 289
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY L +VH +W +PG+ DYI PK N YQSLHT V G PLEVQIR+ EM+ A
Sbjct: 290 ACYTVLGIVHTIWKPIPGQFDDYIANPKTNMYQSLHTTVVGPTGEPLEVQIRSAEMNRLA 349
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
E+G AAHWRYKEG VL ++ AR LTW +A+ D
Sbjct: 350 EYGIAAHWRYKEG-----GNVLDDLD-AR--LTWIRQALEGD 383
>gi|288574632|ref|ZP_06392989.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570373|gb|EFC91930.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 753
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/403 (40%), Positives = 224/403 (55%), Gaps = 37/403 (9%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R +G+PY++HCV A +LA + + + A LLHD ++D ++ + + FG V LV+
Sbjct: 73 RGTGEPYIIHCVYVASILADMKMDVKTMEAALLHDCIEDTVVTKEALAERFGEEVGVLVD 132
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L + E+ +A+ L MFL MA D R VLIKLADR HNM TL AL
Sbjct: 133 GVTKLGKLPFKSFED------YQAENLRKMFLVMAKDIRVVLIKLADRTHNMRTLGALRK 186
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 178
K+QR AKETLEI+ PLA+RLGI K LE+L FK+ +P+ + E+ K+ + EA
Sbjct: 187 DKQQRIAKETLEIYAPLAHRLGIYQVKRTLEDLAFKYYDPNMYYEIKKKVQKRLPEREAT 246
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AI+ LE+ L + I L+ GR K YSI KM +K L++D+++D+ +R+IV++
Sbjct: 247 IKKAIDVLEEKLNSQGIDALI-KGRAKHFYSILEKMNRKGLSVDQLYDLLAMRIIVDDIT 305
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY L +VH +W +PG+ DYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 306 TCYTVLGIVHTIWKPIPGQFDDYIANPKNNMYQSLHTTVVGPSGEPLEVQIRTWEMHWLA 365
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPS 358
E+G AAHWRYKEG + ++ EW R + G +P
Sbjct: 366 EYGVAAHWRYKEGADKMDDLDAKL-EWI--------------RKAIEGGQETRPDEFMER 410
Query: 359 HADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
DD S VFV + D V+ P ST +D
Sbjct: 411 LKDDVLTS---------DVFVFTPQGD---VKSLPRGSTPVDF 441
>gi|169343681|ref|ZP_02864680.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
gi|169298241|gb|EDS80331.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
Length = 726
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 217/343 (63%), Gaps = 15/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + AM+LA +G ++ + AGLLHD ++D +Y+ I F VA+LV+
Sbjct: 37 RESGEPYITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +AD + M LAMA D R ++IKLADRLHNM TL +
Sbjct: 97 GVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKP 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P+++ +L + + E E
Sbjct: 151 EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKF 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ I++L++ L NI + GR K YSI+ KM+ K ++++I D+ +R++V +
Sbjct: 211 ISRIIKELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRILVNTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EMH A
Sbjct: 270 DCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKTFEIQIRTFEMHRTA 329
Query: 299 EFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEAM 337
E+G AAHW+YK G D + +F ++ W R +L WQ EA+
Sbjct: 330 EYGIAAHWKYKSGINGTDSKDMTFENKLT-WLRDILEWQKEAV 371
>gi|110802270|ref|YP_699214.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
gi|110682771|gb|ABG86141.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
Length = 726
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 217/343 (63%), Gaps = 15/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + AM+LA +G ++ + AGLLHD ++D +Y+ I F VA+LV+
Sbjct: 37 RESGEPYITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +AD + M LAMA D R ++IKLADRLHNM TL +
Sbjct: 97 GVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKP 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P+++ +L + + E E
Sbjct: 151 EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKF 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ I++L++ L NI + GR K YSI+ KM+ K ++++I D+ +R++V +
Sbjct: 211 ISRIIKELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRILVNTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EMH A
Sbjct: 270 DCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGSEGKTFEIQIRTFEMHRTA 329
Query: 299 EFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEAM 337
E+G AAHW+YK G D + +F ++ W R +L WQ EA+
Sbjct: 330 EYGIAAHWKYKSGINGTDSKDMTFENKLT-WLRDILEWQKEAV 371
>gi|186685647|ref|YP_001868843.1| (p)ppGpp synthetase I SpoT/RelA [Nostoc punctiforme PCC 73102]
gi|186468099|gb|ACC83900.1| (p)ppGpp synthetase I, SpoT/RelA [Nostoc punctiforme PCC 73102]
Length = 757
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/341 (44%), Positives = 208/341 (60%), Gaps = 14/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G ++ ++AAG LHD ++D ++ I FGA V LVE
Sbjct: 60 RKSGEPYIAHPIAVADLLHDLGGSAAMIAAGFLHDVVEDTEVTSQEIEERFGAEVRQLVE 119
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ N T+ +A+ MFLAMA D R +++KLADRLHNM TL +
Sbjct: 120 GVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMSE 173
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD---QHTELSSKLVECFDEA 177
R+R A+ET +IF PLANRLGI K +LE+L FK+L P+ Q EL S+ +E
Sbjct: 174 ASRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPEAFRQMQELVSEKRTAREEK 233
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ A L++ L+ I F + GR K LYSI+ KM +++ EI+D+ LR+IV++
Sbjct: 234 L-ARATNMLQERLQQAGIRFQDISGRPKHLYSIYQKMHRQQKEFHEIYDLAALRIIVQSN 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 293 EECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRPLEVQIRTIEMHHI 352
Query: 298 AEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE H + W R +L WQ +
Sbjct: 353 AEYGIAAHWKYKETGGSSISHLTGTDDKFTWLRQLLEWQTD 393
>gi|427704011|ref|YP_007047233.1| RelA/SpoT family (p)ppGpp synthetase [Cyanobium gracile PCC 6307]
gi|427347179|gb|AFY29892.1| (p)ppGpp synthetase, RelA/SpoT family [Cyanobium gracile PCC 6307]
Length = 773
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 209/345 (60%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A LL IGA++ V+AAG LHD ++D ++ D I FG V LV
Sbjct: 82 FRASGEPYIVHPIAVAGLLRDIGASAAVIAAGFLHDVVEDTQVTPDEIEARFGEEVRALV 141
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + + T +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 142 EGVTKLGGI------HFTNRTEAQAENLRRMFLAMASDIRVVLVKLADRLHNMRTLGALK 195
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+QR A+ET +I+ PLANRLGI +K +LE+L FK L P+ + ++ ++ E
Sbjct: 196 PEKQQRIARETRDIYAPLANRLGIGRFKWELEDLAFKVLEPESYRDVQQQVATKRSEREE 255
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + ++ L L + + GR K LY I KM +++ EI+D+ LR++ +
Sbjct: 256 RLGATVQLLRDRLVAAGLQDCEVSGRPKHLYGIWSKMQRQQKAFHEIYDVAALRILCPSV 315
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH ++ +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 316 ESCYRALAVVHDIFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTTEMHQV 374
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
AE+G AAHW+YKEG + + W R ++ WQ + +D S
Sbjct: 375 AEYGIAAHWKYKEGGSPAAGDT-ERFNWLRQLVDWQKDDGGEDSS 418
>gi|312621838|ref|YP_004023451.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202305|gb|ADQ45632.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
kronotskyensis 2002]
Length = 726
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 215/340 (63%), Gaps = 16/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+LH +E A++LA + + + AGLLHD ++D S + + R FG +A+LV+
Sbjct: 44 RNSGEPYILHPLEVALILADLELDIPSIVAGLLHDVVEDTSASLEDVEREFGKEIAELVD 103
Query: 62 GVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDA 117
GV+KL +L SKL R+ + M +AMA D R +LIKLADRLHNM TL
Sbjct: 104 GVTKLGKLEFTSKLERQ---------VENYRKMLIAMAKDIRVILIKLADRLHNMRTLKY 154
Query: 118 LPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFD 175
LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+P+ + +L K+ +
Sbjct: 155 LPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVER 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + I + + LK+ NI + GR K YSI+ KM ++ T++EI+D++ +R+IV
Sbjct: 215 EEYIKRIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIVN 274
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V G P EVQIRT +MH
Sbjct: 275 SVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPFEVQIRTFDMH 334
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 335 RTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 373
>gi|237667442|ref|ZP_04527426.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|237655790|gb|EEP53346.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 737
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 214/347 (61%), Gaps = 21/347 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +LA +G ++ + AGLLHD ++D S++ R F VA+LV+
Sbjct: 37 RESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTDCSFEDASRMFNPEVANLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L ++ + +AD + M LAMA D R ++IKLADRLHNM TL +P
Sbjct: 97 GVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPA 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE------CF 174
K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ ++ +L + E +
Sbjct: 154 NKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKEYYDLVKDIAEKRVERESY 213
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
+ +V +KLE A D +I GR K YSI+ KM+ K +++EI D+ +R++V
Sbjct: 214 IQDIVNDLYKKLEGAGIDSDID-----GRPKHFYSIYKKMVNKNKSIEEIFDLTAIRVLV 268
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EM
Sbjct: 269 NSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGKTFEIQIRTFEM 328
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVE------WARWVLTWQCE 335
H AE+G AAHW+YKEGD + V + E W R +L WQ E
Sbjct: 329 HKTAEYGIAAHWKYKEGDTAGGTEVDKQKEFEKKLAWLRDMLEWQKE 375
>gi|342732530|ref|YP_004771369.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384455923|ref|YP_005668518.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|418016067|ref|ZP_12655632.1| GTP diphosphokinase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|342329985|dbj|BAK56627.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345506402|gb|EGX28696.1| GTP diphosphokinase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984266|dbj|BAK79942.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Candidatus Arthromitus sp. SFB-mouse-Yit]
Length = 721
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 210/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R G+PY++H +E A +L+ + + + GLLHD ++D +Y I TFG VA LVE
Sbjct: 36 RIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEFTYSDIATTFGEEVAILVE 95
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +++ +E +A + M +AM D R +LIKLADRLHNM TL L
Sbjct: 96 GVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVILIKLADRLHNMRTLKYLSE 149
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD++ +++ + E D E +
Sbjct: 150 HKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDEYYKIAKLVSEKRDDREKL 209
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
I + ++ L + N++ ++ GR K LYSI+ K+++K T+DEI D+ +R+IV+N +
Sbjct: 210 TNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKTIDEIFDLIAIRVIVDNIK 268
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY AL + H+ + + K KDYI PK N YQSLHT V + P E+QIRTK+MH A
Sbjct: 269 NCYIALGLAHEKYNPISNKFKDYIAMPKSNNYQSLHTTVLTKSGKPFEIQIRTKQMHKVA 328
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAH++YKE SF + V W R V+ W E
Sbjct: 329 ELGIAAHFKYKEQTDTKDSFDEKFV-WIREVVEWLTET 365
>gi|417965159|ref|ZP_12606749.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-4]
gi|418372784|ref|ZP_12964876.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|380338744|gb|EIA27606.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-4]
gi|380342453|gb|EIA30898.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 721
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 210/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R G+PY++H +E A +L+ + + + GLLHD ++D +Y I TFG VA LVE
Sbjct: 36 RIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEFTYSDIATTFGEEVAILVE 95
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +++ +E +A + M +AM D R +LIKLADRLHNM TL L
Sbjct: 96 GVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVILIKLADRLHNMRTLKYLSE 149
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD++ +++ + E D E +
Sbjct: 150 HKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDEYYKIAKLVSEKRDDREKL 209
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
I + ++ L + N++ ++ GR K LYSI+ K+++K T+DEI D+ +R+IV+N +
Sbjct: 210 TNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKTIDEIFDLIAIRVIVDNIK 268
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY AL + H+ + + K KDYI PK N YQSLHT V + P E+QIRTK+MH A
Sbjct: 269 NCYIALGLAHEKYNPISNKFKDYIAMPKSNNYQSLHTTVLTKSGKPFEIQIRTKQMHKVA 328
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAH++YKE SF + V W R V+ W E
Sbjct: 329 ELGIAAHFKYKEQTDTKDSFDEKFV-WIREVVEWLTET 365
>gi|220929370|ref|YP_002506279.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium cellulolyticum H10]
gi|219999698|gb|ACL76299.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulolyticum H10]
Length = 726
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 210/335 (62%), Gaps = 10/335 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H +E A++LA + + T + A LLHDT++D +YD + FG VA+LV+
Sbjct: 40 RISGEPYIIHPLEVAVILAEMELDCTALIAALLHDTIEDTTCTYDELKAQFGQEVAELVD 99
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E + + L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 100 GVTKLGKIPFTTKEEQ------QVENLRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMSE 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ A+ETLEI+ PLA+RLGIS K +LE++C ++L+P + +L K+ EA
Sbjct: 154 GKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLDPKGYYDLVEKINTKRKQREAY 213
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+T IE L + + I + GR K YSI+ KM+K+ T+++I+D++ R+IV + +
Sbjct: 214 ITKIIETLREKTNELGIENAQIDGRPKHFYSIYRKMVKQNKTLEQIYDLFAFRIIVNSVK 273
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH+L+ + G+ KDYI PK N YQSLHT + G G P EVQIRT +MH A
Sbjct: 274 DCYAVLGLVHELYKPMSGRFKDYIAMPKPNMYQSLHTTLIGPGGQPFEVQIRTWDMHRVA 333
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E G AAHW+YKEG ++ + W R +L WQ
Sbjct: 334 EVGIAAHWKYKEG-INNTKDSDKKFAWLRQLLEWQ 367
>gi|281418020|ref|ZP_06249040.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
gi|281409422|gb|EFB39680.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
Length = 724
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 217/338 (64%), Gaps = 14/338 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDP+++H +E A +LA + + T + AG+LHD ++D + + I FG VA+LV+
Sbjct: 40 RESGDPFIVHPMEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDEVANLVD 99
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E ++A+ L MFLAMA D R +LIKLADRLHNM TL +P
Sbjct: 100 GVTKLGKIPYTTKEE------LQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPT 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P + +L +K+ + E
Sbjct: 154 EKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKRRER--E 211
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++ + +++K + + + GR K YSI+ KM+++ T+++I+D++ +R+IV
Sbjct: 212 AYISEIIKTIQEKTVEIGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVRVIVTTV 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH+++ +PG+ KDYI PK N YQSLHT + G VP EVQIRT EMH
Sbjct: 272 KDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPFEVQIRTWEMHRV 331
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G AAHW+YKEG + + + W R +L WQ E
Sbjct: 332 AEVGIAAHWKYKEG--KSADDYDNKLAWLRQLLEWQKE 367
>gi|297564854|ref|YP_003683826.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus silvanus DSM 9946]
gi|296849303|gb|ADH62318.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus silvanus DSM 9946]
Length = 738
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 219/360 (60%), Gaps = 27/360 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H V A +LA +G ++ + AGLLHDT++D + + I FG V +V
Sbjct: 46 LRKSGEPYIVHPVAVAEILAELGLDAETLMAGLLHDTVEDTEVKPEDIEERFGTAVRRIV 105
Query: 61 EGVSKLSQLSKLARENNTASKTVEADR---LHTMFLAMA-DARAVLIKLADRLHNMMTLD 116
EG +K+S+L KLA + ++E R L MF+AMA D R +++KLADRLHN+ TL+
Sbjct: 106 EGETKVSKLYKLAHQVAEERPSLEEQRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLE 165
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECF 174
+P K+ R A+ETLEI+ PLA+RLGI K +LE+L F++L P+ + +L +L
Sbjct: 166 FMPPHKQTRIARETLEIYAPLAHRLGIGQIKWELEDLSFRYLEPEAYADLLGRLKSHRAE 225
Query: 175 DEAMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 229
EA V E LE L+ +I + GR K LYSI KM ++ +++I+D+
Sbjct: 226 REAAVERGKEALEAVLQRDSVLGASIQGYEVTGRTKHLYSIWKKMQREGRALEQIYDLLA 285
Query: 230 LRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLH-T 275
LR+I+E ++ CY L +VH LW +PG++KDYI PK NGYQSLH T
Sbjct: 286 LRVILEPRPTPNLEEKAMREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTT 345
Query: 276 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
V+ G GL PLEVQIRT+EMH AE+G AAHW YK+G + + V+W R + WQ E
Sbjct: 346 VIAGSGL-PLEVQIRTREMHQIAEYGIAAHWLYKQG-LTDPEEIKRRVDWLRSIQEWQAE 403
>gi|295695639|ref|YP_003588877.1| (p)ppGpp synthetase I SpoT/RelA [Kyrpidia tusciae DSM 2912]
gi|295411241|gb|ADG05733.1| (p)ppGpp synthetase I, SpoT/RelA [Kyrpidia tusciae DSM 2912]
Length = 739
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 205/335 (61%), Gaps = 10/335 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+ Y+LH + +LA + + T + A LLHD ++D ++ + I + FG V LV+
Sbjct: 60 RSSGEDYILHPIAVTEILADLHLDGTTLTAALLHDVVEDTPVTLEEIGKRFGPEVVALVD 119
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ RE +A+ L M LAMA D R +LIKLADRLHNM TL +P
Sbjct: 120 GVTKLRRIQYATREEQ------QAENLRKMLLAMAKDIRVILIKLADRLHNMRTLRHVPE 173
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K+ R AKETLEIF PLA+RLGIS + +LE+L ++LNP Q+ +++ + + E A
Sbjct: 174 QKQMRIAKETLEIFAPLAHRLGISRIQWELEDLALRYLNPQQYYRIANLMTKKRREREAY 233
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+ L + + NI + GR K +YS++ KM+ + EI+D+ +R+IV+N +
Sbjct: 234 IQKVIDTLREKFVELNIKADI-SGRPKHIYSVYRKMVNQNKQFGEIYDLLAVRVIVDNIK 292
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VVH LW +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH A
Sbjct: 293 DCYAILGVVHTLWRPLPGRFKDYIAMPKPNMYQSLHTTVIGPQGEPLEIQIRTWEMHRTA 352
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW YK+G Q + W R +L WQ
Sbjct: 353 EYGIAAHWLYKQGGRTSDPSFQQKLAWFREILEWQ 387
>gi|212638570|ref|YP_002315090.1| GTP pyrophosphokinase [Anoxybacillus flavithermus WK1]
gi|212560050|gb|ACJ33105.1| GTP pyrophosphokinase (ppGpp synthetase) [Anoxybacillus
flavithermus WK1]
Length = 732
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 206/337 (61%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + +AAG LHD ++D ++ + + R FG VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPATIAAGFLHDVVEDTHVTKEDLEREFGKEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MFLAMA D R +LIKLADRLHNM TL LP+
Sbjct: 104 GVTKLGKIKYKSHEEQ------QAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPI 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+++ L + I + GR K +YSI+ KM+ + +EI+D+ +R+IVE+ +
Sbjct: 218 LEEVIQEMRARLLEVGIQAEI-SGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIVESIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVVGPKGEPLEVQIRTFEMHHIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
EFG AAHW YKEG + + + W R ++ WQ E
Sbjct: 337 EFGIAAHWAYKEGKTIRPNTFEEKLSWFREIVEWQNE 373
>gi|390559275|ref|ZP_10243626.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
gi|390174152|emb|CCF82919.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
Length = 721
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 212/341 (62%), Gaps = 6/341 (1%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H VE A++LA + + +AA LLHD ++D + + + FG + LV
Sbjct: 32 FRRSGEPYISHPVEVAIILAEMQLDQETLAAALLHDVVEDTDTTMEDLRTLFGDRIVRLV 91
Query: 61 EGVSKLSQLSKLARENNTA-SKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDAL 118
+GV+KL ++ A ++ K +A+ L MFLAM D R VLIKLADRLHNM TL+ +
Sbjct: 92 DGVTKLGRIRWAAETDHAVREKERQAESLRKMFLAMVDDVRVVLIKLADRLHNMRTLEHM 151
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
P K+ R AKET+EI+ PLANRLGI K +LE+L ++++P + + L +
Sbjct: 152 PRAKQLRSAKETMEIYAPLANRLGIWQIKSELEDLALRYVDPQTYFTIERALERRGTDRD 211
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ S I +L + L+D I + GR K + SI KM +K+ + DEI+D+ G+R+IV+
Sbjct: 212 QYLESVIAELSRTLEDAGIGAEI-SGREKHITSIARKMERKERSFDEIYDVLGIRVIVDE 270
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
++DCY AL V+H +W +PG+ DY+ PK + YQS+HTVV G PLE+QIRT EMH
Sbjct: 271 KKDCYGALGVIHSIWHPIPGEFDDYVATPKESMYQSIHTVVLGPNGHPLEIQIRTHEMHY 330
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAM 337
AE+G AAHWRYKEG + + V + W R V+ W+ E +
Sbjct: 331 IAEYGIAAHWRYKEG-SRPDANVEAKIAWLRQVMDWRDEVV 370
>gi|291539586|emb|CBL12697.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
XB6B4]
Length = 770
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 216/341 (63%), Gaps = 15/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D ++ + I + FG VA LV+
Sbjct: 70 RKSGEPYIIHPLCVAIILAELELDKETIVAGLLHDVVEDTVMTDEQIAQEFGDEVALLVD 129
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS A + V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 130 GVTKLGQLSYDADKVE-----VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTP 184
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ET++I+ P+A RLGIS K++L++L K+L PD + +L ++ + +
Sbjct: 185 EKQKEKARETMDIYAPIAQRLGISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEY 244
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E++ Q +KD I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +
Sbjct: 245 VQKLVEEVRQHIKDAGIPAQV-DGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIVDSVK 303
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 304 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPFEIQIRTFEMHRTA 363
Query: 299 EFGFAAHWRYKE----GDCQHSSFVL--QMVEWARWVLTWQ 333
E+G AAHW+YKE G V + + W R +L WQ
Sbjct: 364 EYGIAAHWKYKEASNNGGVSQPMTVTEEEKLSWLRQILEWQ 404
>gi|291535022|emb|CBL08134.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
M50/1]
Length = 770
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 216/341 (63%), Gaps = 15/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D ++ + I + FG VA LV+
Sbjct: 70 RKSGEPYIIHPLCVAIILAELELDKETIVAGLLHDVVEDTVMTDEQIAQEFGDEVALLVD 129
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS A + V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 130 GVTKLGQLSYDADKVE-----VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTP 184
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ET++I+ P+A RLGIS K++L++L K+L PD + +L ++ + +
Sbjct: 185 EKQKEKARETMDIYAPIAQRLGISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEY 244
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E++ Q +KD I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +
Sbjct: 245 VQKLVEEVRQHIKDAGIPAQV-DGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIVDSVK 303
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 304 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPFEIQIRTFEMHRTA 363
Query: 299 EFGFAAHWRYKE----GDCQHSSFVL--QMVEWARWVLTWQ 333
E+G AAHW+YKE G V + + W R +L WQ
Sbjct: 364 EYGIAAHWKYKEASNNGGVSQPMTVTEEEKLSWLRQILEWQ 404
>gi|134098602|ref|YP_001104263.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
gi|291008201|ref|ZP_06566174.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
gi|133911225|emb|CAM01338.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
Length = 771
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 209/343 (60%), Gaps = 17/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + + +LA +G ++T + A LLHDT++D S + + FG V+ LV+
Sbjct: 82 RKSGDPYITHPLAVSTILAELGMDTTTLVAALLHDTVEDTDYSLERLSGDFGEEVSHLVD 141
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ A EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 142 GVTKLDKVKLGA--------AAEAETIRKMIIAMARDPRVLVIKLADRLHNMRTMRFLPP 193
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + +
Sbjct: 194 EKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVANRAPSRDTY 253
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + I++L L ++ V GR K YSIH KM+ + D+IHD+ G+R++V+
Sbjct: 254 LRTVIDELSGQLDTARLAARV-EGRPKHYYSIHQKMIVRGRDFDDIHDLVGVRILVDEVR 312
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 313 DCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTHEMHRTA 372
Query: 299 EFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKE G H++ + + W R +L WQ EA
Sbjct: 373 EYGIAAHWRYKETKGRNGGSGHTAVEVDEMAWMRQLLDWQREA 415
>gi|417962567|ref|ZP_12604748.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-3]
gi|380336322|gb|EIA26345.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-3]
Length = 721
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 210/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R G+PY++H +E A +L+ + + + GLLHD ++D +Y I TFG VA LVE
Sbjct: 36 RIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEFTYSDIATTFGEEVAILVE 95
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +++ +E +A + M +AM D R +LIKLADRLHNM TL L
Sbjct: 96 GVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVILIKLADRLHNMRTLKYLSE 149
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD++ +++ + E D E +
Sbjct: 150 HKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDEYYKIAKLVSEKRDDREKL 209
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
I + ++ L + N++ ++ GR K LYSI+ K+++K T+DEI D+ +R+IV+N +
Sbjct: 210 TNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKTIDEIFDLIAIRVIVDNIK 268
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY AL + H+ + + K KDYI PK N YQSLHT V + P E+QIRTK+MH A
Sbjct: 269 NCYIALGLAHEKYNPISNKFKDYIAMPKSNNYQSLHTTVLTKSGKPFEIQIRTKQMHKVA 328
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAH++YKE SF + V W R V+ W E
Sbjct: 329 ELGIAAHFKYKEQTDTKDSFDEKFV-WIREVVEWLTET 365
>gi|254527119|ref|ZP_05139171.1| RelA/SpoT family protein [Prochlorococcus marinus str. MIT 9202]
gi|221538543|gb|EEE40996.1| RelA/SpoT family protein [Prochlorococcus marinus str. MIT 9202]
Length = 769
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 212/345 (61%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D + I FG V LV
Sbjct: 78 FRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTGIDLCEIETNFGLEVKILV 137
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + NN +A+ L MFLAMA D R VL+KLADRLHNM T++ L
Sbjct: 138 EGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVVLVKLADRLHNMRTIEWLN 191
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EA 177
K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P ++ +L ++ V+ D E
Sbjct: 192 DEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPKEYLDLKDQIAVKRSDREK 251
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +++ L + + GR K LY I KM +++ EI+D+ LR+IV++
Sbjct: 252 RLKLTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQKHFHEIYDVAALRIIVDDS 311
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT MH
Sbjct: 312 DSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGYQSLHTSVIGRHR-PIEVQIRTTSMHQI 370
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
AE+G AAHW+YKEG S + W R ++ WQ E +D +
Sbjct: 371 AEYGIAAHWQYKEGGSPAKSNA-ERFNWLRQLVEWQQEGNERDHN 414
>gi|403668327|ref|ZP_10933602.1| GTP pyrophosphokinase [Kurthia sp. JC8E]
Length = 730
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 215/341 (63%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R+SG+PY++H ++ A +LA + + V+AG LHD ++D ++ + + FG VA LV
Sbjct: 43 FRSSGEPYIVHPIQVAGILAELQMDPETVSAGFLHDVVEDTSVTREDLVEQFGEEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ K +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSK------KEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
+ K++R +KETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K EA
Sbjct: 157 VEKQRRISKETLEIFAPLAHRLGISAIKWELEDTALRYLNPQQYYRIVNLMKRKRTEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + ++++ + L D +I L GR K +YSI+ KM + +EI+D+ +R+IV++
Sbjct: 217 YLQNVMDEITEQLDDVSIP-ADLSGRPKHIYSIYNKMQSQHKQFNEIYDLLAVRVIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRTK MH
Sbjct: 276 KDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDPLEVQIRTKSMHNI 335
Query: 298 AEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG ++ + + W R +L +Q E+
Sbjct: 336 AEFGVAAHWAYKEGKSAVTENTDIDSKLTWFREILEFQNES 376
>gi|257792451|ref|YP_003183057.1| (p)ppGpp synthetase I SpoT/RelA [Eggerthella lenta DSM 2243]
gi|317490319|ref|ZP_07948805.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
gi|325833401|ref|ZP_08165850.1| GTP diphosphokinase [Eggerthella sp. HGA1]
gi|257476348|gb|ACV56668.1| (p)ppGpp synthetase I, SpoT/RelA [Eggerthella lenta DSM 2243]
gi|316910609|gb|EFV32232.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
gi|325485325|gb|EGC87794.1| GTP diphosphokinase [Eggerthella sp. HGA1]
Length = 802
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 211/338 (62%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H VE A++LA + + + A LLHDT++D ++ D + F VA LVE
Sbjct: 91 RKSGEPFVAHPVEVAIILADLRMDVETLCAALLHDTVEDTSVTRDQVEAEFNPQVAQLVE 150
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K++++ + + A+ + MF+AM+ D R ++IKLADRLHNM TL AL
Sbjct: 151 GVTKITRIEVESLTDEQAAT------IRKMFVAMSKDIRVIVIKLADRLHNMRTLGALRE 204
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
+R A+ETLEI+ P+A+RLGI+ K +LE+L F +L P++ ++S + E E
Sbjct: 205 DRRIFKARETLEIYAPIAHRLGINNIKWELEDLSFYYLEPNKFKQISRMVTESRSEREGY 264
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L ++ NI ++ GR K LYSI+ KM KK EI+D+ +R+IV++ +
Sbjct: 265 LDQIISILHDEMEKVNIQAQIM-GRPKHLYSIYQKMTKKGKGFSEIYDLIAVRVIVKSVK 323
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VH LW +PG+ KDYI PKFN YQSLHT V G PLEVQIRT++MH Q+
Sbjct: 324 DCYSALGAVHTLWHPMPGRFKDYIAMPKFNMYQSLHTTVIGPAGRPLEVQIRTEDMHRQS 383
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKE + + Q + W R ++ WQ E+
Sbjct: 384 EYGVAAHWRYKEKGGKSGDALDQQLAWLRQMVDWQDES 421
>gi|228993146|ref|ZP_04153068.1| GTP pyrophosphokinase [Bacillus pseudomycoides DSM 12442]
gi|228999195|ref|ZP_04158776.1| GTP pyrophosphokinase [Bacillus mycoides Rock3-17]
gi|229006742|ref|ZP_04164376.1| GTP pyrophosphokinase [Bacillus mycoides Rock1-4]
gi|228754603|gb|EEM04014.1| GTP pyrophosphokinase [Bacillus mycoides Rock1-4]
gi|228760540|gb|EEM09505.1| GTP pyrophosphokinase [Bacillus mycoides Rock3-17]
gi|228766605|gb|EEM15246.1| GTP pyrophosphokinase [Bacillus pseudomycoides DSM 12442]
Length = 728
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 175/455 (38%), Positives = 249/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLHDVVEDTEVTLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGI+T K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGINTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T +KL++ +IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIRDKLKEVAIQPDIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AE+G AAHW YKEG ++ L+ + W R +L WQ EA
Sbjct: 332 MHEIAEYGIAAHWAYKEGKAAEATGTLEKKLTWFRQILEWQNEA---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 451
>gi|240143890|ref|ZP_04742491.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
gi|257204082|gb|EEV02367.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
Length = 774
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 216/341 (63%), Gaps = 15/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D ++ + I + FG VA LV+
Sbjct: 74 RKSGEPYIIHPLCVAIILAELELDKETIVAGLLHDVVEDTVMTDEQIAQEFGDEVALLVD 133
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS A + V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 134 GVTKLGQLSYDADKVE-----VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTP 188
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ET++I+ P+A RLGIS K++L++L K+L PD + +L ++ + +
Sbjct: 189 EKQKEKARETMDIYAPIAQRLGISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEY 248
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E++ Q +KD I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +
Sbjct: 249 VQKLVEEVRQHIKDAGIPAQV-DGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIVDSVK 307
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 308 DCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPFEIQIRTFEMHRTA 367
Query: 299 EFGFAAHWRYKE----GDCQHSSFVL--QMVEWARWVLTWQ 333
E+G AAHW+YKE G V + + W R +L WQ
Sbjct: 368 EYGIAAHWKYKEASNNGGVSQPMTVTEEEKLSWLRQILEWQ 408
>gi|166368056|ref|YP_001660329.1| GTP pyrophosphokinase [Microcystis aeruginosa NIES-843]
gi|166090429|dbj|BAG05137.1| GTP pyrophosphokinase [Microcystis aeruginosa NIES-843]
Length = 765
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 207/340 (60%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEARFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLN 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + + S K ++
Sbjct: 179 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRAVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + + L + L + I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 EARIETVTNTLREKLPEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L +VH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|352684036|ref|YP_004896020.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
gi|350278690|gb|AEQ21880.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
Length = 740
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 209/340 (61%), Gaps = 15/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY++H + A +LA + + T +AA LHD ++D ++ D + FG VA LV+
Sbjct: 46 RASGEPYIIHPLGVASILAQLHMDDTTLAAAFLHDVVEDTDVTLDQLTDIFGLEVAGLVD 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++RE + + MFLAMA D R VLIKLADRLHNM T+ +P
Sbjct: 106 GVTKLGKIEYISREEQ------QVENYRKMFLAMAKDIRVVLIKLADRLHNMRTMKYMPP 159
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
K++R + ETLEI+ PLA+RLGI K +LE+L F+++ P + EL K+ EAM
Sbjct: 160 NKQKRISSETLEIYAPLAHRLGIYAIKWELEDLSFRYMEPQHYYELVEQVKVKRHEREAM 219
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V A+++L D I + GR KS YSI+ KM K +++EI+D+ +R++V++ +
Sbjct: 220 VQEAMDELSHLCSDSGIK-CEIQGRPKSFYSIYKKMQKDNKSINEIYDLLAVRVLVDSVK 278
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH W +PG+ KDYI PK NGYQSLHT V PLE+QIRT EMH +
Sbjct: 279 DCYGVLGIVHGKWRPIPGRFKDYIAVPKSNGYQSLHTTVVSSSGQPLEIQIRTFEMHRIS 338
Query: 299 EFGFAAHWRYKE--GDCQHSS---FVLQMVEWARWVLTWQ 333
E+G AAHWRYKE G SS + + W R +L W
Sbjct: 339 EYGVAAHWRYKESGGSNMPSSSDKSADEKMAWLRQLLDWH 378
>gi|438002543|ref|YP_007272286.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
gi|432179337|emb|CCP26310.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
Length = 716
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 209/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ ++ H + AM+LA + + +AAGLLHD ++D + + I + FG+ +A LV+
Sbjct: 33 RVSGELFISHPLGVAMILADLELDIPTIAAGLLHDVVEDTDYTIEDIEKIFGSEIAILVD 92
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L +E +A+ L MF AMA D R +LIKLADRLHNM TL ++P
Sbjct: 93 GVTKLGKLEFKTKEEQ------QAENLRKMFFAMAKDIRIILIKLADRLHNMRTLKSMPE 146
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ A ET++IF PLA+RLGIS K +LE+L F++L P+ + +L K+ + E
Sbjct: 147 EKQREKAMETIDIFAPLAHRLGISKIKWELEDLAFRYLEPEHYYDLVEKVAKKRQERENH 206
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+ L + L I+ + GR K YSI+ KM + T ++I+D+ +R+IV +
Sbjct: 207 INKMIDILNERLLATGINAEI-QGRPKHFYSIYKKMKDQNKTFEQIYDLTAVRVIVNTVK 265
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VVH LW +PG+ KDYI PK N YQSLHT V PLE+QIRT EMH A
Sbjct: 266 DCYGALGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIDSSGDPLEIQIRTYEMHKTA 325
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEGD + F Q + W R +L WQ E
Sbjct: 326 EYGIAAHWRYKEGDKNSNEFE-QKLSWLREILDWQRE 361
>gi|318040683|ref|ZP_07972639.1| metal dependent phosphohydrolase [Synechococcus sp. CB0101]
Length = 776
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/344 (44%), Positives = 209/344 (60%), Gaps = 11/344 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASG+PY+ H V A LL IGA++ V+AAG LHD ++D ++ + I + FG V LV
Sbjct: 78 VRASGEPYICHPVAVADLLRDIGASAGVIAAGFLHDVVEDTDVTPEEIEQHFGLEVRGLV 137
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + + T +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 138 EGVTKLGGI------HFTNKTEAQAENLRRMFLAMASDIRVVLVKLADRLHNMRTLGALK 191
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+ + ++ ++ E
Sbjct: 192 PEKQQRIARETREIYGPLANRLGIGRFKWELEDLAFKILEPEAYRDVQQQVASKRSDREE 251
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L L ++ + GR K LY I KM +++ EI+D+ LR+I N
Sbjct: 252 RLGVTVQLLRDRLAGVGLADCEVSGRPKHLYGIWSKMERQQKAFHEIYDVAALRIICPNL 311
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 312 ESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTAEMHRV 370
Query: 298 AEFGFAAHWRYKEGDCQHSSFV-LQMVEWARWVLTWQCEAMSKD 340
AEFG AAHW+YKEG ++ + W R ++ WQ + + D
Sbjct: 371 AEFGIAAHWKYKEGGSPAATGSDAERFNWLRQLVDWQKDGVGDD 414
>gi|417961047|ref|ZP_12603537.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-2]
gi|380334505|gb|EIA24897.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-2]
Length = 638
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 210/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R G+PY++H +E A +L+ + + + GLLHD ++D +Y I TFG VA LVE
Sbjct: 36 RIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEFTYSDIATTFGEEVAILVE 95
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +++ +E +A + M +AM D R +LIKLADRLHNM TL L
Sbjct: 96 GVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVILIKLADRLHNMRTLKYLSE 149
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD++ +++ + E D E +
Sbjct: 150 HKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDEYYKIAKLVSEKRDDREKL 209
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
I + ++ L + N++ ++ GR K LYSI+ K+++K T+DEI D+ +R+IV+N +
Sbjct: 210 TNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKTIDEIFDLIAIRVIVDNIK 268
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY AL + H+ + + K KDYI PK N YQSLHT V + P E+QIRTK+MH A
Sbjct: 269 NCYIALGLAHEKYNPISNKFKDYIAMPKSNNYQSLHTTVLTKSGKPFEIQIRTKQMHKVA 328
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAH++YKE SF + V W R V+ W E
Sbjct: 329 ELGIAAHFKYKEQTDTKDSFDEKFV-WIREVVEWLTET 365
>gi|425464751|ref|ZP_18844061.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9809]
gi|389833148|emb|CCI22581.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9809]
Length = 765
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 207/340 (60%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEARFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLN 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD + + S K ++
Sbjct: 179 PQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRAVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + + L + L + I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 EARIETVTNTLREKLPEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L +VH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|303248713|ref|ZP_07334966.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
gi|302489878|gb|EFL49806.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
Length = 750
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 218/352 (61%), Gaps = 16/352 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H +E A LLA + ++ +AAGLLHDT++D + D + FG VAD+V
Sbjct: 45 VRLSGEPYLSHPLEVAGLLADMRLDAASIAAGLLHDTVEDTKATVDEVEELFGDDVADIV 104
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+K+S + ++E +A+ + M LAMA D R VL+KLADRLHNM TL+
Sbjct: 105 DGVTKISLIPFESKEE------AQAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQK 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ET++I+ PLANRLG+ K +LE++ FK+L PD + ++ + + DE+
Sbjct: 159 PYKQARIAQETMDIYAPLANRLGLHRIKTELEDISFKYLKPDVYNQIKTGVDRHRTLDES 218
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++++ L+ +I + GR K L+S+ KM + LT+D++HD+ R+IVEN
Sbjct: 219 YIERVISQVKELLRPNHIRARIF-GRRKHLWSVFNKMRVQGLTLDQVHDLVAFRVIVENI 277
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY L +VH +W VPG+ KDYI+ PK N YQSLHT V G +E+QIRT EM+
Sbjct: 278 RECYAVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPDGERIEIQIRTVEMNRL 337
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDRSCVGN 346
AE G AAHW+YKE + F + VE W R ++ WQ E + R V N
Sbjct: 338 AEEGVAAHWKYKE--REKGKFNPKDVERFAWLRQIMDWQRE-LKDSREFVAN 386
>gi|256004313|ref|ZP_05429295.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
2360]
gi|385778263|ref|YP_005687428.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum DSM 1313]
gi|419722157|ref|ZP_14249305.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
gi|419724255|ref|ZP_14251323.1| RelA/SpoT family protein [Clostridium thermocellum YS]
gi|255991747|gb|EEU01847.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
2360]
gi|316939943|gb|ADU73977.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
1313]
gi|380772261|gb|EIC06113.1| RelA/SpoT family protein [Clostridium thermocellum YS]
gi|380781728|gb|EIC11378.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
Length = 724
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 217/338 (64%), Gaps = 14/338 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDP+++H +E A +LA + + T + AG+LHD ++D + + I FG VA+LV+
Sbjct: 40 RESGDPFIVHPMEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDEVANLVD 99
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E ++A+ L MFLAMA D R +LIKLADRLHNM TL +P
Sbjct: 100 GVTKLGKIPYTTKEE------LQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPP 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P + +L +K+ + E
Sbjct: 154 EKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKRRER--E 211
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++ + +++K + + + GR K YSI+ KM+++ T+++I+D++ +R+IV
Sbjct: 212 AYISEIIKTIQEKTVEIGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVRVIVTTV 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH+++ +PG+ KDYI PK N YQSLHT + G VP EVQIRT EMH
Sbjct: 272 KDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPFEVQIRTWEMHRV 331
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G AAHW+YKEG + + + W R +L WQ E
Sbjct: 332 AEVGIAAHWKYKEG--KSADDYDNKLAWLRQLLEWQKE 367
>gi|125973859|ref|YP_001037769.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum ATCC
27405]
gi|125714084|gb|ABN52576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum ATCC
27405]
Length = 724
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 217/338 (64%), Gaps = 14/338 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDP+++H +E A +LA + + T + AG+LHD ++D + + I FG VA+LV+
Sbjct: 40 RESGDPFIVHPMEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDEVANLVD 99
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E ++A+ L MFLAMA D R +LIKLADRLHNM TL +P
Sbjct: 100 GVTKLGKIPYTTKEE------LQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPP 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P + +L +K+ + E
Sbjct: 154 EKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKRRER--E 211
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++ + +++K + + + GR K YSI+ KM+++ T+++I+D++ +R+IV
Sbjct: 212 AYISEIIKTIQEKTVEIGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVRVIVTTV 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH+++ +PG+ KDYI PK N YQSLHT + G VP EVQIRT EMH
Sbjct: 272 KDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPFEVQIRTWEMHRV 331
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G AAHW+YKEG + + + W R +L WQ E
Sbjct: 332 AEVGIAAHWKYKEG--KSADDYDNKLAWLRQLLEWQKE 367
>gi|414079723|ref|YP_007001147.1| RelA/SpoT family protein [Anabaena sp. 90]
gi|413973002|gb|AFW97090.1| RelA/SpoT family protein [Anabaena sp. 90]
Length = 757
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 153/341 (44%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +L +G + ++AAGLLHD ++D ++ + I FGA V LV
Sbjct: 59 IRKSGEPYIAHPVAVAEILRELGGSPAMIAAGLLHDVVEDTEVTSEDIEARFGAEVRLLV 118
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KLS++ N T+ +A+ MFLAMA D R +++KLADRLHNM TL +
Sbjct: 119 EGVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMS 172
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
RQR A+ET +IF PLANRLGI K +LE+L FK+L P+ + E + E E
Sbjct: 173 EASRQRSAQETRDIFAPLANRLGIWQIKWELEDLAFKYLEPEAYRETQQCVAEKRTAREE 232
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ A + L + L ++ L + GR K LYSI+ KM +++ EI+D+ LR+IV+
Sbjct: 233 KLLKATDTLRRRLLKAGVNCLEISGRPKHLYSIYQKMQRQQKEFHEIYDLAALRIIVQTN 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 293 EECYRALAVVHDSFRPIPGRFKDYIGLPKPNHYQSLHTGVIGLTGRPLEVQIRTLEMHHI 352
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
AE+G AAHW+YKE ++ V E W R +L WQ +
Sbjct: 353 AEYGIAAHWKYKETGGSENTPVTSTDEKFTWLRQLLDWQSD 393
>gi|376261555|ref|YP_005148275.1| RelA/SpoT family (p)ppGpp synthetase [Clostridium sp. BNL1100]
gi|373945549|gb|AEY66470.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. BNL1100]
Length = 726
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 209/335 (62%), Gaps = 10/335 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H VE A++LA + + T + A LLHDT++D +YD + FG VA+LV+
Sbjct: 40 RISGEPYIIHPVEVAIILAEMELDCTALVAALLHDTIEDTTCTYDQLKAQFGQEVAELVD 99
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E + + L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 100 GVTKLGKIPFTTKEEQ------QVENLRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMTQ 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ A+ETLEI+ PLA+RLGIS K +LE++C ++L+P + +L K+ EA
Sbjct: 154 DKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLDPKGYYDLVEKINTKRKQREAY 213
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+T I+ L + + I + GR K YSI+ KM+K+ T+++I+D++ R+IV + +
Sbjct: 214 ITIIIDTLREKTNELGIENAQIDGRPKHFYSIYRKMVKQNKTLEQIYDLFAFRIIVNSVK 273
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH+L+ +PG+ KDYI PK N YQSLHT + G P EVQIRT +MH A
Sbjct: 274 DCYAVLGLVHELYKPMPGRFKDYIAMPKPNMYQSLHTTLIGPEGQPFEVQIRTWDMHRVA 333
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E G AAHW+YKEG ++ W R +L WQ
Sbjct: 334 EVGIAAHWKYKEG-INNAKDSDNKFAWLRQLLEWQ 367
>gi|332799394|ref|YP_004460893.1| (p)ppGpp synthetase I SpoT/RelA [Tepidanaerobacter acetatoxydans
Re1]
gi|332697129|gb|AEE91586.1| (p)ppGpp synthetase I, SpoT/RelA [Tepidanaerobacter acetatoxydans
Re1]
Length = 721
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 209/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ ++ H + AM+LA + + +AAGLLHD ++D + + I + FG+ +A LV+
Sbjct: 38 RVSGELFISHPLGVAMILADLELDIPTIAAGLLHDVVEDTDYTIEDIEKIFGSEIAILVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L +E +A+ L MF AMA D R +LIKLADRLHNM TL ++P
Sbjct: 98 GVTKLGKLEFKTKEEQ------QAENLRKMFFAMAKDIRIILIKLADRLHNMRTLKSMPE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ A ET++IF PLA+RLGIS K +LE+L F++L P+ + +L K+ + E
Sbjct: 152 EKQREKAMETIDIFAPLAHRLGISKIKWELEDLAFRYLEPEHYYDLVEKVAKKRQERENH 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+ L + L I+ + GR K YSI+ KM + T ++I+D+ +R+IV +
Sbjct: 212 INKMIDILNERLLATGINAEI-QGRPKHFYSIYKKMKDQNKTFEQIYDLTAVRVIVNTVK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VVH LW +PG+ KDYI PK N YQSLHT V PLE+QIRT EMH A
Sbjct: 271 DCYGALGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIDSSGDPLEIQIRTYEMHKTA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEGD + F Q + W R +L WQ E
Sbjct: 331 EYGIAAHWRYKEGDKNSNEFE-QKLSWLREILDWQRE 366
>gi|256545119|ref|ZP_05472485.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
gi|256399160|gb|EEU12771.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
Length = 725
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 216/340 (63%), Gaps = 15/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y +H + A ++ + + + AGL+HD L+D ++ + + FG + LV+
Sbjct: 44 RNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDTPVTEEQMKENFGEEITFLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L+ +E +A+ + M LAM+ D R +LIKLADRLHNM TL+
Sbjct: 104 GVTKLKKLNYKTKEEK------QAENIRKMVLAMSNDIRVILIKLADRLHNMRTLEYKTE 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFDE 176
K+++ A ETLEI+VPLA+RLGI T K +LE+LCF++ P+++ EL+ +K E E
Sbjct: 158 KKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQKPEEYYELAQMVHNKRRE--RE 215
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A + IE L++AL NI++ + GR K L+SI+ KM + K+ +EI+D+ +R++V+
Sbjct: 216 AYINQIIETLDKALSSSNINYEI-SGRPKGLFSIYKKMSRNKIEFNEIYDLTAVRVLVDT 274
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY+ L VH +W +P ++KDYI +PK NGY+SLHT V GE P EVQIRT++MH
Sbjct: 275 VADCYEVLGKVHSIWRPIPNRIKDYIGQPKPNGYRSLHTTVFGEDSKPFEVQIRTRQMHY 334
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
+ E+G AAHW+YKE + + F ++ + R ++ WQ E
Sbjct: 335 ECEYGIAAHWKYKENKSKSTEFDEKLT-FIRQIMEWQKEG 373
>gi|384135926|ref|YP_005518640.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290011|gb|AEJ44121.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 725
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 209/336 (62%), Gaps = 11/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +LA + ++ + AGLLHD ++D +S I +TFGA VA LV+
Sbjct: 45 RLSGEPYISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSDSTIVQTFGAEVATLVD 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +RE +A+ L MF+AMA D R ++IKLADRLHNM TL
Sbjct: 105 GVTKLKRIKFDSREEQ------QAENLRKMFMAMARDIRVLIIKLADRLHNMRTLKYQSP 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
+ R A+ETLEIF PLA+RLGI+T K +LE+L ++LNP Q+ + + + E
Sbjct: 159 ETQVRKARETLEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYYRIVNLMARKRQEREQY 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L + L + N+ V GR K +YSI+ KM+ + +EI+D++ +R+IVE+ +
Sbjct: 219 IEGVIAVLREKLAELNLKADV-SGRAKHIYSIYRKMVTQHKEFNEIYDLFAIRIIVESIK 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VVH +W +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH A
Sbjct: 278 DCYGALGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTVIGPNGEPLEIQIRTWEMHQTA 337
Query: 299 EFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW YKE G + + + W R VL WQ
Sbjct: 338 EYGIAAHWVYKESGSKRVEDDFAKKLAWFREVLEWQ 373
>gi|425454881|ref|ZP_18834606.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9807]
gi|389804320|emb|CCI16779.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9807]
Length = 765
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 150/340 (44%), Positives = 208/340 (61%), Gaps = 17/340 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 66 RKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEVTPEEIEDRFGVEVRNLVE 125
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
V+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 126 AVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLN 178
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
++QR + ET EIF PLANRLGI +K +LE+LCFK+L PD + + S K ++
Sbjct: 179 PQQQQRISLETREIFAPLANRLGIGRFKWELEDLCFKYLEPDAYRTVQLLVSEKRID--R 236
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + + L + L++ I L L GR K LY I+ KM + ++I+DI +R+IVE
Sbjct: 237 EARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVE 296
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E+CY+ L +VH + +P + KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 297 TKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMH 356
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 357 HVAEYGIAAHWKYKETGSSQTTLTAEDEKFAWLRNLLDWQ 396
>gi|258512062|ref|YP_003185496.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478788|gb|ACV59107.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 725
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 209/337 (62%), Gaps = 11/337 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY+ H + A +LA + ++ + AGLLHD ++D +S I + FGA VA LV
Sbjct: 44 MRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSDSAIVQAFGAEVATLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +RE +A+ L MF+AMA D R ++IKLADRLHNM TL
Sbjct: 104 DGVTKLKRIKFDSREEQ------QAENLRKMFMAMARDIRVLIIKLADRLHNMRTLKYQS 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
+ R A+ETLEIF PLA+RLGI+T K +LE+L ++LNP Q+ + + + E
Sbjct: 158 PETQVRKARETLEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYYRIVNLMARKRQEREQ 217
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I L + L + N+ V GR K +YSI+ KM+ + +EI+D++ +R+IVE+
Sbjct: 218 YIEGVIAVLREKLAELNLKADV-SGRAKHIYSIYRKMVTQHKEFNEIYDLFAIRIIVESI 276
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL VVH +W +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 277 KDCYGALGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTVIGPNGEPLEIQIRTWEMHQT 336
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHW YKE G + + + W R VL WQ
Sbjct: 337 AEYGIAAHWVYKESGSKRVEDDFAKKLAWFREVLEWQ 373
>gi|335048883|ref|ZP_08541895.1| GTP diphosphokinase [Megasphaera sp. UPII 199-6]
gi|333764666|gb|EGL42052.1| GTP diphosphokinase [Megasphaera sp. UPII 199-6]
Length = 733
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 148/336 (44%), Positives = 210/336 (62%), Gaps = 11/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + A +LA + ++T + A LLHD ++D D I + FG VA LV+
Sbjct: 46 RVSGEWYIVHPLAVAQILADMKIDATTITASLLHDVVEDTAYMLDDIEKLFGKEVAFLVD 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L +E+ + + + MFLAMA D R V+IKLADRLHNM TL +
Sbjct: 106 GVTKLNRLDYRTKEDQ------QINSMRKMFLAMAKDVRVVVIKLADRLHNMRTLRFMRS 159
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDEAM 178
K++R ++ETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +
Sbjct: 160 DKQKRISQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHVREEI 219
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V AIE L +AL +I F + GR K YSI+ KM K + +++D+Y +R+IV+ +
Sbjct: 220 VNEAIEVLRKALTASHIQFEI-NGRPKHFYSIYKKMKKDNRDLSQVYDLYAIRIIVDTVQ 278
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW +P + KDYI PK N YQSLHT V G P+E+QIRT EMH A
Sbjct: 279 DCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQPVEIQIRTWEMHRVA 338
Query: 299 EFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQ 333
E+G AAHWRYKEG + + + W R +L WQ
Sbjct: 339 EYGVAAHWRYKEGRANAGANEFDEKMGWLRNLLEWQ 374
>gi|357634035|ref|ZP_09131913.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
gi|357582589|gb|EHJ47922.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
Length = 738
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 233/407 (57%), Gaps = 40/407 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H +E A +LA + ++ VAAGLLHDT++D + D I FG VAD+V
Sbjct: 38 VRLSGEPYLSHPLEAAGILADMRLDAASVAAGLLHDTVEDTKATVDEIEELFGDEVADIV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+K+S + ++E +A+ + M LAMA D R VL+KLADRLHNM TL+
Sbjct: 98 DGVTKISLIPFESKEE------AQAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQK 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
KR A+ET++I+ PLANRLG+ K +LE+L FK+L PD ++++ + + DE+
Sbjct: 152 PVKRALIAQETMDIYAPLANRLGLHRIKTELEDLSFKYLKPDVYSQIKAGVDRHHTLDES 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++ Q + + NI ++ GR K L+S+ KM + LT+D++HD+ R++VE
Sbjct: 212 YIERVIGQIRQMVGENNIKARII-GRRKHLWSVFNKMRVQGLTIDQVHDLVAFRVLVETI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY L +VH +W VPG+ KDYI+ PK N YQSLHT V G +E+QIRT EM+
Sbjct: 271 RECYSVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPDGERIEIQIRTVEMNRL 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDRSCVGNGDSIKPPC 354
AE G AAHW+YKE + F + VE W R ++ WQ E + R V N
Sbjct: 331 AEEGVAAHWKYKE--REKGKFNPKDVERFTWLRQIMDWQRE-LKDSREFVAN-------L 380
Query: 355 TFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
F D+ + + P K V+E P +T +DL
Sbjct: 381 RFDLFQDEV-YVFTP----------------KGEVKELPEGATAVDL 410
>gi|269926113|ref|YP_003322736.1| (p)ppGpp synthetase I SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
gi|269789773|gb|ACZ41914.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
Length = 721
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 217/339 (64%), Gaps = 8/339 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H V A++LA + ++ +A+ LLHDT++D L+ D I FG V+ LV+
Sbjct: 38 RKSGEPFISHPVNVALILADLKQDAQAIASALLHDTVEDTNLTLDDIETIFGPEVSRLVD 97
Query: 62 GVSKLSQLSKLA--RENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
G++KL+++ +L+ E + + +A+ L MFLAM D R VLIKLADRLHNM T++ L
Sbjct: 98 GLTKLNKI-RLSPDDEKDPKEQQAQAENLRKMFLAMVEDPRVVLIKLADRLHNMRTIEHL 156
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
P K+ A+ETLEI+ PLA RLGI ++ +LE+L FK L PD++ E+++++
Sbjct: 157 PRDKQLSKARETLEIYAPLAGRLGIFKFRSELEDLSFKVLYPDKYREIAAQVERSGVTRG 216
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ AI+ L++AL + I + GR K LYSI+ KM +K+ + D+I D+ GLR+I +
Sbjct: 217 KYIEQAIDVLKKALDAEGIPAEI-TGRRKHLYSIYRKMEQKQRSFDQIFDVLGLRVITDE 275
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
CY AL V+H +W +PG+ DYI PK + YQSLHT V G PLE+QIRT++MH
Sbjct: 276 VMQCYAALGVIHSIWRPIPGEFDDYIAMPKESMYQSLHTAVVGLDGKPLEIQIRTRDMHE 335
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHWRYKEG + + + W R +L W+ E
Sbjct: 336 VAEYGIAAHWRYKEGKKANEA-AEHRITWLRQLLEWRDE 373
>gi|227824350|ref|ZP_03989182.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904849|gb|EEH90767.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 725
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 209/340 (61%), Gaps = 15/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY++H + A +LA + + T +AA LHD ++D ++ D + FG VA LV+
Sbjct: 31 RASGEPYIIHPLGVASILAQLHMDDTTLAAAFLHDVVEDTDVTLDQLTDIFGLEVAGLVD 90
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++RE + + MFLAMA D R VLIKLADRLHNM T+ +P
Sbjct: 91 GVTKLGKIEYISREEQ------QVENYRKMFLAMAKDIRVVLIKLADRLHNMRTMKYMPP 144
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
K++R + ETLEI+ PLA+RLGI K +LE+L F+++ P + EL K+ EAM
Sbjct: 145 NKQKRISSETLEIYAPLAHRLGIYAIKWELEDLSFRYMEPQHYYELVEQVKVKRHEREAM 204
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V A+++L D I + GR KS YSI+ KM K +++EI+D+ +R++V++ +
Sbjct: 205 VQEAMDELSHLCSDSGIK-CEIQGRPKSFYSIYKKMQKDNKSINEIYDLLAVRVLVDSVK 263
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH W +PG+ KDYI PK NGYQSLHT V PLE+QIRT EMH +
Sbjct: 264 DCYGVLGIVHGKWRPIPGRFKDYIAVPKSNGYQSLHTTVVSSSGQPLEIQIRTFEMHRIS 323
Query: 299 EFGFAAHWRYKE--GDCQHSS---FVLQMVEWARWVLTWQ 333
E+G AAHWRYKE G SS + + W R +L W
Sbjct: 324 EYGVAAHWRYKESGGSNMPSSSDKSADEKMAWLRQLLDWH 363
>gi|428201543|ref|YP_007080132.1| RelA/SpoT family (p)ppGpp synthetase [Pleurocapsa sp. PCC 7327]
gi|427978975|gb|AFY76575.1| (p)ppGpp synthetase, RelA/SpoT family [Pleurocapsa sp. PCC 7327]
Length = 765
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/339 (45%), Positives = 209/339 (61%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ + I FGA V LVE
Sbjct: 65 RKSGEPYIAHPIAVASLLRDLGGDKAMIAAGFLHDVVEDTDVTLEEIEERFGAEVRQLVE 124
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 125 GVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIIVKLADRLHNMRTLEHLK 177
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++ A ET EIF PLANRLGI K +LE+L FK+L P+ + + S + E EA
Sbjct: 178 PEKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYLEPEAYRAVQSLVAEKRTDREA 237
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E L + L I+ + GR K LY I+ KM +++ EI+DI LR+IV+++
Sbjct: 238 RLEKVSEMLRERLTSLGINVREIKGRPKHLYGIYQKMQRQQKEFHEIYDIAALRIIVDSK 297
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+AL VVH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH
Sbjct: 298 DECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTTVVGLNGRPMEVQIRTLEMHHI 357
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQ 333
AE+G AAHW+YKE ++ + Q E W R +L WQ
Sbjct: 358 AEYGIAAHWKYKETGGSSTAQLSQEDEKFTWLRQLLEWQ 396
>gi|386394260|ref|ZP_10079041.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
gi|385735138|gb|EIG55336.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
Length = 737
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 233/407 (57%), Gaps = 40/407 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H +E A +LA + ++ VAAGLLHDT++D + D I FG VAD+V
Sbjct: 38 VRLSGEPYLSHPLEAAGILADMRLDAASVAAGLLHDTVEDTKATVDEIEELFGDEVADIV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+K+S + ++E +A+ + M LAMA D R VL+KLADRLHNM TL+
Sbjct: 98 DGVTKISLIPFESKEE------AQAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQK 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
KR A+ET++I+ PLANRLG+ K +LE+L FK+L PD ++++ + + DE+
Sbjct: 152 PVKRALIAQETMDIYAPLANRLGLHRIKTELEDLSFKYLKPDVYSQIKAGVDRHHTLDES 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++ Q + + NI ++ GR K L+S+ KM + LT+D++HD+ R++VE
Sbjct: 212 YIERVIGQIRQMVGENNIRARII-GRRKHLWSVFNKMRVQGLTIDQVHDLVAFRVLVETI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY L +VH +W VPG+ KDYI+ PK N YQSLHT V G +E+QIRT EM+
Sbjct: 271 RECYAVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPDGERIEIQIRTVEMNRL 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDRSCVGNGDSIKPPC 354
AE G AAHW+YKE + F + VE W R ++ WQ E + R V N
Sbjct: 331 AEEGVAAHWKYKE--REKGKFNPKDVERFTWLRQIMDWQRE-LKDSREFVAN-------L 380
Query: 355 TFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
F D+ + + P K V+E P +T +DL
Sbjct: 381 RFDLFQDEV-YVFTP----------------KGEVKELPEGATAVDL 410
>gi|310829081|ref|YP_003961438.1| (p)ppGpp synthetase I [Eubacterium limosum KIST612]
gi|308740815|gb|ADO38475.1| (p)ppGpp synthetase I [Eubacterium limosum KIST612]
Length = 725
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 207/340 (60%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H V A +LA ++ + A +LHD ++D +YD I F VADLVE
Sbjct: 45 RLSGEAYIIHPVSVAYILAEYKMDTETIVAAILHDVIEDTSYTYDDIKEMFNEQVADLVE 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ ++E + +A+ L M LAM+ D R +LIKL DRLHNM TL+ +
Sbjct: 105 GVTKIGKIEYQSKEES------QAENLRKMVLAMSKDIRVILIKLVDRLHNMRTLEYMKE 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAM 178
K+ ++ETL+I+ P+ANRLGI T K +LE+L K+L+PD + +L K + + E
Sbjct: 159 SKQIEKSRETLDIYAPIANRLGIQTIKAELEDLALKYLDPDGYYDLVKKVKMKKQSREEY 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+ LE+ + + I + GR K YSI+ KM + DEI+D+ +R+IV++ +
Sbjct: 219 INKVIKILEKKIDEVGIEAKIY-GRSKHFYSIYRKMKAQNRNFDEIYDLIAVRVIVDSVK 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH W +PG+ KDYI PK N YQS+HT V G P E+QIRTKEMH A
Sbjct: 278 DCYGVLGIVHTQWKPIPGRFKDYIAMPKPNMYQSIHTTVIGPNGDPFEIQIRTKEMHETA 337
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM---VEWARWVLTWQCE 335
E+G AAHW+YKEG ++ L+ + W R +L WQ E
Sbjct: 338 EYGIAAHWKYKEGITDSNNKELRYENKMSWLRQILEWQKE 377
>gi|218288848|ref|ZP_03493099.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
gi|218240937|gb|EED08114.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
Length = 725
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 209/336 (62%), Gaps = 11/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +LA + ++ + AGLLHD ++D +S I +TFGA VA LV+
Sbjct: 45 RLSGEPYISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSDSAIVQTFGAEVATLVD 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +RE +A+ L MF+AMA D R ++IKLADRLHNM TL
Sbjct: 105 GVTKLKRIKFDSREEQ------QAENLRKMFMAMARDIRVLIIKLADRLHNMRTLKYQSP 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
+ R A+ETLEIF PLA+RLGI+T K +LE+L ++LNP Q+ + + + E
Sbjct: 159 ETQVRKARETLEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYYRIVNLMARKRQEREQY 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L + L + N+ V GR K +YSI+ KM+ + +EI+D++ +R+IVE+ +
Sbjct: 219 IEGVIAVLREKLAELNLKADV-SGRAKHIYSIYRKMVTQHKEFNEIYDLFAIRIIVESIK 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VVH +W +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH A
Sbjct: 278 DCYGALGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTVIGPNGEPLEIQIRTWEMHQTA 337
Query: 299 EFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW YKE G + + + W R VL WQ
Sbjct: 338 EYGIAAHWVYKESGSKRVEDDFAKKLAWFREVLEWQ 373
>gi|428221859|ref|YP_007106029.1| RelA/SpoT family (p)ppGpp synthetase [Synechococcus sp. PCC 7502]
gi|427995199|gb|AFY73894.1| (p)ppGpp synthetase, RelA/SpoT family [Synechococcus sp. PCC 7502]
Length = 752
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/320 (46%), Positives = 203/320 (63%), Gaps = 11/320 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+LH ++ A LL +G S ++AAG LHD ++D ++ I FGA V LVE
Sbjct: 64 RASGEPYILHPIQVANLLRDLGGGSAMIAAGFLHDVVEDTSVTLAEIEAQFGAEVRQLVE 123
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS++ N SKT +A+ MFL MA D R +++KLADRLHNM TL+ L
Sbjct: 124 GVTKLSKI-------NFNSKTERQAENFRRMFLYMAEDIRVIVVKLADRLHNMRTLEHLA 176
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+ A+ET +IF PLANRLGI +K +LE+L FK+L +Q+ E+ + + E EA
Sbjct: 177 PHKQVLIARETRDIFAPLANRLGIGQFKWELEDLAFKYLEAEQYREMKALVAETRSDREA 236
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+T A+E L ++ I+ + GR K LY I+ KM +++ EI+DI +R+IV N
Sbjct: 237 RITEAVEILRSRIQKIGITGFEVTGRPKHLYGIYEKMHRQQKPYGEIYDIAAVRVIVNNT 296
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+ L + H + VPG+ KDYI PK NGYQSLHT V PLEVQIRT EMH
Sbjct: 297 DECYRILAIAHDCFRPVPGRFKDYIALPKPNGYQSLHTAVISPDGQPLEVQIRTWEMHHV 356
Query: 298 AEFGFAAHWRYKEGDCQHSS 317
AE+G AAHW+YKE + +S
Sbjct: 357 AEYGIAAHWKYKESNSNPNS 376
>gi|443474532|ref|ZP_21064506.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
gi|443020698|gb|ELS34625.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
Length = 761
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 150/338 (44%), Positives = 209/338 (61%), Gaps = 18/338 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+LH + A +L +G ++ ++AAG LHD ++D +S D I FG + LVE
Sbjct: 78 RASGEPYILHPISVAAILKDLGGSNAMIAAGFLHDVVEDTDVSCDQIEEKFGKEIRQLVE 137
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS KL+ E+ T S +A+ MFLAMA D R +++KLADRLHNM TL L
Sbjct: 138 GVTKLS---KLSFESKTES---QAENFRRMFLAMAQDIRVIIVKLADRLHNMRTLQHLRS 191
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ ++ET EIF PLANRLG+ K +LE++ FK++ P+Q+ + S + E + +
Sbjct: 192 EKQVLISRETREIFAPLANRLGLGQIKWELEDIAFKYIEPEQYQMMESLVAETHESRQEQ 251
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+T + L L I + GR K LY I KM ++K +EI+DI +R+IV +E
Sbjct: 252 LTEVTKVLGDRLASMGIDDFEISGRPKHLYGIFRKMERQKKQYNEIYDIQAVRVIVNTKE 311
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L VVH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH A
Sbjct: 312 ECYRVLAVVHDHFCPIPGRFKDYIGLPKPNRYQSLHTAVIGPKGQPVEVQIRTWEMHHIA 371
Query: 299 EFGFAAHWRYKE---------GDCQHSSFVLQMVEWAR 327
++G AAHW+YKE GD Q +++ Q+VEW R
Sbjct: 372 DYGIAAHWKYKESNSVSKPLKGDDQKFTWLRQLVEWQR 409
>gi|320449341|ref|YP_004201437.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
gi|320149510|gb|ADW20888.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
Length = 667
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 222/359 (61%), Gaps = 25/359 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +LA++ ++ V AGLLHDTL+D ++ + + R FG V LV
Sbjct: 41 LRKSGEPYITHPVAVAEILASLRMDADTVMAGLLHDTLEDCGVAPEELERRFGPAVRRLV 100
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EG +K+S+L KLA N + A+ L MF+AMA D R +++KLADRLHN+ TL+ +P
Sbjct: 101 EGETKVSKLYKLA---NLEGEEKRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ + L S++ E + E
Sbjct: 158 PEKQRRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAYHALLSRIQETQEAREQ 217
Query: 178 MVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
++ A+ LE+AL+ + L + GR K LYSI KM ++ +++I+D+ +R+
Sbjct: 218 IIRKAMVALEEALRRDELLQAQLQGLEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRV 277
Query: 233 IVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 279
I++ ++ CY L +VH LW +PG++KDYI PK NGYQSLHT V
Sbjct: 278 ILDPKPAPTEEGRALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIA 337
Query: 280 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
+PLEVQIRT+EMH AE+G AAHW YKEG + V W + + WQ E S
Sbjct: 338 LEGLPLEVQIRTREMHRIAEYGIAAHWLYKEGLTDPEELK-RRVSWLKSIQEWQQEFSS 395
>gi|410464128|ref|ZP_11317593.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982755|gb|EKO39179.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 740
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 229/405 (56%), Gaps = 36/405 (8%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H +E A +LA + ++ +A+GLLHDT++D + D + FG VAD+V
Sbjct: 38 VRLSGEPYLSHPLEAAGILADMRLDAASIASGLLHDTVEDTKATVDELEELFGEEVADIV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+K+S + +E +A+ + M LAMA D R VL+KLADRLHNM TL+
Sbjct: 98 DGVTKISLIPFETKEE------AQAENIRKMILAMAEDIRVVLVKLADRLHNMRTLEFQK 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+ A+ET++I+ PLANRLG+ K +LE+ F++L PD + +L + DE
Sbjct: 152 PHKQAIIAQETMDIYAPLANRLGLHRIKTELEDWSFRYLKPDIYAQLVEGVATHHTVDET 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I L L NI ++ GR K L+S+H KM + LT+D++HD+ R+IVE
Sbjct: 212 FIERVIGHLNDLLGPNNIKARIV-GRRKHLWSVHNKMRVQGLTIDQVHDLVAFRVIVETI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY L +VH LW VPG+ KDYI+ PK N YQSLHT V G G +E+QIRT+EMH
Sbjct: 271 RECYHVLGLVHSLWKPVPGRFKDYISMPKANMYQSLHTTVVGPGGERIEIQIRTEEMHRL 330
Query: 298 AEFGFAAHWRYKEGD-CQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF 356
AE G AAHW+YKE + + + ++ +W R ++ WQ E + R V N F
Sbjct: 331 AEEGVAAHWKYKEREKGKFNPKDVERFQWLRQIMDWQRE-LKDSREFVAN-------LRF 382
Query: 357 PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
D+ + + P K V+E P +T +DL
Sbjct: 383 DLFQDEV-YVFTP----------------KGDVKELPEGATAVDL 410
>gi|290968824|ref|ZP_06560361.1| GTP diphosphokinase [Megasphaera genomosp. type_1 str. 28L]
gi|290781120|gb|EFD93711.1| GTP diphosphokinase [Megasphaera genomosp. type_1 str. 28L]
Length = 733
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 148/336 (44%), Positives = 209/336 (62%), Gaps = 11/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + A +LA + ++T + A LLHD ++D D I FG VA LV+
Sbjct: 46 RVSGEWYIVHPLAVAQILADMKIDATTITASLLHDVVEDTAYMLDDIENLFGKEVAFLVD 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L +E+ + + + MFLAMA D R V+IKLADRLHNM TL +
Sbjct: 106 GVTKLNRLDYRTKEDQ------QINSMRKMFLAMAKDVRVVVIKLADRLHNMRTLRFMRS 159
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDEAM 178
K++R ++ETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +
Sbjct: 160 DKQKRISQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHVREEI 219
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V AIE L +AL +I F + GR K YSI+ KM K + +++D+Y +R+IV+ +
Sbjct: 220 VNEAIEVLRKALTASHIQFEI-NGRPKHFYSIYKKMKKDNRDLSQVYDLYAIRIIVDTVQ 278
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW +P + KDYI PK N YQSLHT V G P+E+QIRT EMH A
Sbjct: 279 DCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQPVEIQIRTWEMHRVA 338
Query: 299 EFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQ 333
E+G AAHWRYKEG + + + W R +L WQ
Sbjct: 339 EYGVAAHWRYKEGRANAGANEFDEKMGWLRNLLEWQ 374
>gi|148265188|ref|YP_001231894.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter uraniireducens Rf4]
gi|146398688|gb|ABQ27321.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter uraniireducens Rf4]
Length = 716
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 211/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H +E A +LA + + V GLLHDT++D + + + FGA VA LV+
Sbjct: 39 RLSGEPYLVHPMEVAGILADLKLDVPTVVTGLLHDTVEDTLTTLEELEGMFGAEVARLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ +E + +A+ M LAMA D R +L+KLADRLHNM TL P
Sbjct: 99 GVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKETL+I+ P+ANRLGIS K +LE+L F++L+P + +L+SK+ + E +
Sbjct: 153 PKQRSIAKETLDIYAPIANRLGISWVKSELEDLSFRYLDPQIYYDLASKVTKKKKERESY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V ++ +++ L D I+ V GR K LYSI+ KM + + +DEI+D+ +R++VE+
Sbjct: 213 VDEVMQIIKEKLADHGITGEV-SGRSKHLYSIYRKMQSRSVDIDEIYDLVAIRVMVEDIR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L ++H W +PG+ KDYI PK N YQSLHT V G +EVQIRT EMH A
Sbjct: 272 ECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGERMEVQIRTGEMHRVA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E G AAHW+YKEG V + W R +L WQ E
Sbjct: 332 EAGIAAHWKYKEGKGYDEKEVKRFT-WLRQLLEWQQE 367
>gi|284048851|ref|YP_003399190.1| (p)ppGpp synthetase I SpoT/RelA [Acidaminococcus fermentans DSM
20731]
gi|283953072|gb|ADB47875.1| (p)ppGpp synthetase I, SpoT/RelA [Acidaminococcus fermentans DSM
20731]
Length = 740
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 248/454 (54%), Gaps = 50/454 (11%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY++H + A +LA + + +AA LHD ++D ++ D + FG VA LV+
Sbjct: 46 RASGEPYIIHPLGVASILAQLQMDDVTLAAAFLHDVVEDTEVTLDQMEDIFGREVAMLVD 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++RE + + MFLAMA D R VLIKLADRLHNM T+ +P+
Sbjct: 106 GVTKLGKIEYISREEQ------QVENYRKMFLAMAKDIRVVLIKLADRLHNMRTMKFMPV 159
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
K++R + ETLEI+ PLA+RLGI K +LE+L F+++ P + EL K+ EAM
Sbjct: 160 NKQKRISSETLEIYAPLAHRLGIYAIKWELEDLAFRYMEPQHYYELVEQVKVKRHEREAM 219
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V A+++L + ++ I+ + GR KS YSI+ KM + T++EI+D+ +R++V+ +
Sbjct: 220 VQEAMDELRKLCEESGINCQI-QGRPKSFYSIYKKMQRDHKTINEIYDLLAVRVLVDTVK 278
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH W +PG+ KDYI PK NGYQSLHT V PLE+QIRT EMH +
Sbjct: 279 DCYGVLGIVHGKWKPIPGRFKDYIAVPKSNGYQSLHTTVVSSSGQPLEIQIRTFEMHKVS 338
Query: 299 EFGFAAHWRYKE-GDCQHSSFVLQMVE----WARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
E+G AAHWRYKE G + S + V+ W R +L W KD ++ P
Sbjct: 339 EYGVAAHWRYKESGGSKMPSSSDKNVDAKMAWLRQLLEWH-----KD---------MRDP 384
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWS 413
F FS VFV + D V + P S +D R G S
Sbjct: 385 HEFVDTVKMDVFS--------DEVFVFTPQGD---VLDLPEGSVPIDFAYRVHTGVGN-S 432
Query: 414 PYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
G + ++ P H LK GD+VE+
Sbjct: 433 CVGAKVNGKIVPLDYH---------LKNGDIVEI 457
>gi|332711840|ref|ZP_08431770.1| (p)ppGpp synthetase, RelA/SpoT family [Moorea producens 3L]
gi|332349168|gb|EGJ28778.1| (p)ppGpp synthetase, RelA/SpoT family [Moorea producens 3L]
Length = 754
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/339 (45%), Positives = 211/339 (62%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G NST++AAG LHD ++D ++ + I FG V +LVE
Sbjct: 58 RKSGEPYIAHPVAVADLLRDLGGNSTMIAAGFLHDVVEDTEITPEEIESRFGVEVRNLVE 117
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 118 GVTKLSKF-------NFSSKTERQAENFRRMFLAMAADIRVIVVKLADRLHNMRTLEYLK 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A+ET +IF PLANRLGI +K +LE+L FK+L D + E+ S + E E
Sbjct: 171 PQKQGQIAQETRDIFAPLANRLGIGCFKWELEDLAFKYLERDAYREIQSLVAERRSDREQ 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E L + ++ + + + R K LY I+ KM ++ EI+DI +R+IVE +
Sbjct: 231 RLKEVSELLRERIQKTGVHCVDISSRPKHLYGIYQKMQRQNKGFHEIYDIAAMRVIVETK 290
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH L+ +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH
Sbjct: 291 EECYRALAVVHDLFRPIPGRFKDYIGLPKPNRYQSLHTGVIGFNGRPIEVQIRTLEMHHV 350
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW+YKE G + F + + W R +L WQ
Sbjct: 351 AEWGIAAHWKYKETGGSNTTKFTADDEKLTWLRQLLEWQ 389
>gi|254414928|ref|ZP_05028692.1| RelA/SpoT family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196178417|gb|EDX73417.1| RelA/SpoT family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 751
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/341 (45%), Positives = 208/341 (60%), Gaps = 14/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ H V A LL +G NST++AAGLLHD ++D ++ D I FGA V LVE
Sbjct: 56 RASGEPYIAHPVAVAGLLRDLGGNSTMMAAGLLHDVVEDTDVTPDEIESIFGAEVRHLVE 115
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 116 GVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLK 168
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++ A+ET EIF PLANRLGI +K +LE+L FK+L P+ + ++ + E E
Sbjct: 169 PQKQRAIAQETREIFAPLANRLGIGRFKWELEDLSFKYLEPNAYRKIQELVAERRQDREE 228
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+T + L L + I + L R K LY I+ KM ++ EI+D+ +R+IVE
Sbjct: 229 RLTQVSQILRGRLDEMGIRCVDLNSRPKHLYGIYQKMQRRNKEFHEIYDLAAMRIIVETN 288
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH
Sbjct: 289 EGCYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGFHGRPIEVQIRTLEMHRI 348
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL---QMVEWARWVLTWQCE 335
AE+G AAHW+YKE + + W R +L WQ +
Sbjct: 349 AEYGIAAHWKYKETGTSDPTQIGADDDKFTWLRQLLEWQND 389
>gi|225548080|ref|ZP_03769365.1| hypothetical protein RUMHYD_00059 [Blautia hydrogenotrophica DSM
10507]
gi|225040756|gb|EEG51002.1| RelA/SpoT family protein [Blautia hydrogenotrophica DSM 10507]
Length = 769
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 216/340 (63%), Gaps = 14/340 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H + A++LA + + + AGLLHD ++D ++ + I + FGA VA LV
Sbjct: 70 FRKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDAVEDTIMTTEEIQQEFGAEVALLV 129
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL QLS +A K ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 130 DGVTKLGQLS------YSADKVELQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYM 183
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDE 176
K+Q A+ET++I+ P+A RLGIS KV+L++L K+L PD + +L K L + E
Sbjct: 184 KPEKQQEKARETMDIYAPIAMRLGISKVKVELDDLALKYLKPDVYYDLVEKINLKKSERE 243
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
V + ++++ ++D I V GR K +SI+ KM+ + T+D+I+D++ +R++V+
Sbjct: 244 DYVNQVVGQVKRHMEDAGIKAQV-DGRIKHFFSIYRKMVNQDKTIDQIYDLFAVRILVDT 302
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 303 VKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPKGQPFEIQIRTFEMHK 362
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQ 333
AE+G AAHW+YKE ++ E W R +L WQ
Sbjct: 363 TAEYGIAAHWKYKESSDGKKPIGIREEEKLNWLRQILEWQ 402
>gi|332981509|ref|YP_004462950.1| (p)ppGpp synthetase I SpoT/RelA [Mahella australiensis 50-1 BON]
gi|332699187|gb|AEE96128.1| (p)ppGpp synthetase I, SpoT/RelA [Mahella australiensis 50-1 BON]
Length = 719
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/342 (41%), Positives = 211/342 (61%), Gaps = 11/342 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H V+ A++LA +G +++ + AGLLHD L+D +YD + + FG +ADLVE
Sbjct: 37 RVSGEAYIIHPVQVALILADLGMDASTICAGLLHDVLEDTDYTYDDLAKLFGKEIADLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L ++ K +A+ L MF+AMA D R ++IKLADRLHNM TL L
Sbjct: 97 GVTKLGKLEFQSK------KEAQAENLRKMFIAMAKDVRVIMIKLADRLHNMRTLRYLDK 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
+ R A+ET+EI+ PLA+RLGI K +LE+L ++L+P+ + +L K+ E
Sbjct: 151 ESQLRNAQETMEIYAPLAHRLGIFKIKWELEDLSLRYLDPEAYYDLVDKVAAKRKQREEY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L++ + + I V GR K YSI+ KM + ++I+D+ +R+IV
Sbjct: 211 INQVITALKERIAETGIEATV-DGRPKHFYSIYKKMKYQGKAFEQIYDLMAVRVIVNTVR 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H +W +PG+ KDYI PK N YQSLHT V G P+E+Q+RT +MH A
Sbjct: 270 DCYAVLGLIHTIWKPIPGRFKDYIAVPKPNMYQSLHTTVVGPQGEPVEIQVRTWDMHRTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
E+G AAHW+YKEG +++ ++ W R +L WQ + D
Sbjct: 330 EYGIAAHWKYKEGRLKNTDLDSKLA-WLRQILEWQSDDRDAD 370
>gi|410696071|gb|AFV75139.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus oshimai JL-2]
Length = 732
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 237/400 (59%), Gaps = 40/400 (10%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +LA++ ++ V AGLLHD ++D ++ + + R FGAGV +VE
Sbjct: 48 RRSGEPYITHPVAVAEILASLRMDAETVMAGLLHDVVEDCGVAPEELERRFGAGVRRIVE 107
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G +K+S+L K+A N + A+ L MF+AMA D R +++KLADRLHN+ TL+ +P
Sbjct: 108 GETKVSKLYKMA---NLEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPP 164
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ + L +L E + E +
Sbjct: 165 EKQRRIAQETLEIYAPLAHRLGMGQIKWELEDLSFRYLHPEAYQSLLERLKEGQEAREKL 224
Query: 179 VTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
V A+ +L++AL KD+ I + GR K LYSI KM ++ +++I+D+ +R+I
Sbjct: 225 VERAMARLKEALEKDELLQAQIQGFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVI 284
Query: 234 VE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 280
++ ++ CY L +VH LW +PG++KDYI PK NGYQSLHT V
Sbjct: 285 LDPKPSATEEARSLREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAL 344
Query: 281 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ------- 333
+PLEVQIRT+EMH AE+G AAHW YKEG V + V W + + WQ
Sbjct: 345 EGLPLEVQIRTREMHKVAEYGIAAHWLYKEG-LTDPEEVKRRVSWLKSIQEWQQEFSSSR 403
Query: 334 --CEAMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 367
EA++KD +G + P P A F+Y
Sbjct: 404 EFVEAVTKD--LLGGRVFVFTPKGRIINLPKGATPVDFAY 441
>gi|323142303|ref|ZP_08077135.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413187|gb|EFY04074.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
Length = 754
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 212/355 (59%), Gaps = 24/355 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + +L + + +AA LHD ++D DYI FG VA+LV+
Sbjct: 53 RKSGEPYIIHPIGVVSILVGLQMDDKTLAAAFLHDVVEDTDYKLDYIKEQFGTVVANLVD 112
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +++E+ + + MFLAMA D R VLIKLADRLHNM T+ +P+
Sbjct: 113 GVTKLGKIEYISKEDR------QIENYRKMFLAMARDIRVVLIKLADRLHNMRTMKYMPV 166
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
K+Q ++ETLEI+ PLA+RLGI T K +LE+L F+++ PD + +L K+ E M
Sbjct: 167 HKQQSISRETLEIYAPLAHRLGIYTIKWELEDLAFRYMEPDIYYDLVEQVKIKRREREDM 226
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A+ L+ A++ I + GR K+ YSIH KML+ + EI+D+ +R++V+ +
Sbjct: 227 INEAMTTLKDAVEKAGIR-CEIQGRPKNFYSIHKKMLRDHKQLSEIYDLLAIRVLVDTVK 285
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH +W +PG+ KDY+ PK N YQSLHT V G PLE+QIRT EMH +
Sbjct: 286 DCYGTLGIVHSMWRPIPGRFKDYVAVPKSNMYQSLHTTVLSNGGQPLEIQIRTFEMHRIS 345
Query: 299 EFGFAAHWRYKE---------GDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCV 344
E+G AAHWRYKE GD + + W R +L W + M+ R V
Sbjct: 346 EYGIAAHWRYKESGGSKPAAGGDKGFDA----KLSWLRQLLEWHKD-MNDSRDFV 395
>gi|146296035|ref|YP_001179806.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409611|gb|ABP66615.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 722
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 213/337 (63%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY++H +E A++LA + + + AGLLHD ++D S I + FG +A LV+
Sbjct: 40 RSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSASPQEIEQEFGGEIASLVD 99
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L T+ +A+ M +AMA D R +LIKLADRLHNM TL LP
Sbjct: 100 GVTKLGKLE------FTSKLEQQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPP 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+P+ + +L K+ + E
Sbjct: 154 EKQRQKAQETIDIYAPLAHRLGISKIKWELEDLALRYLDPEGYYDLVEKIAKKRVEREEY 213
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + + LK+ NI + GR K YSI+ KM ++ T++EI+D++ +R+IV + +
Sbjct: 214 IQRIINLISEKLKEANIEVGQIDGRPKHFYSIYRKMKQQGKTLEEIYDLFAIRIIVNSVK 273
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H L+ +PG+ KDYI PK N YQSLHT V G P EVQIRT +MH A
Sbjct: 274 DCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGEPFEVQIRTFDMHRTA 333
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 334 EYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 369
>gi|406981761|gb|EKE03162.1| hypothetical protein ACD_20C00238G0002 [uncultured bacterium]
Length = 718
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 213/337 (63%), Gaps = 12/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R S +PY++H VE A +LA + A++ + A LLHD L+D + I FG V +LV
Sbjct: 43 RISEEPYIVHPVEVANILANLQADTDTICAALLHDILEDTDTKPEQIKELFGEDVLNLVN 102
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+ S ++E +A+ MFLAMA D R + +KLADRLHNM TL+ +
Sbjct: 103 GVTKLSKYSFNSKEER------QAENFRKMFLAMAEDVRVIFLKLADRLHNMRTLNYMAP 156
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA--M 178
K++ A+ET+EIF PLANRLG+ + +LE+L ++LNP+++ E++ + + E
Sbjct: 157 HKQKEIAQETVEIFAPLANRLGMGKIRAELEDLSLRYLNPEKYFEIAQLVAQSKAERDLT 216
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + I+K+ +LK+ NI V+ GR K+ SI+ KM +++ + +++DI R++V+NE+
Sbjct: 217 VQAIIDKINSSLKNMNIE-AVITGRAKNYNSIYNKMTRQQKSYQDLYDITAARIVVDNEK 275
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L V+H + +PG+ KDYI PK N Y+SLHT V G PLEVQIRT EMH A
Sbjct: 276 ECYEVLGVIHSAFKPIPGRFKDYIAMPKSNLYRSLHTSVIGPRGKPLEVQIRTHEMHDVA 335
Query: 299 EFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQ 333
EFG AAHWRYKE G + SS V W R ++ +Q
Sbjct: 336 EFGIAAHWRYKESGGSTRSSSDVDMKFSWLRKLIEFQ 372
>gi|188588536|ref|YP_001920360.1| GTP pyrophosphokinase [Clostridium botulinum E3 str. Alaska E43]
gi|188498817|gb|ACD51953.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E3 str.
Alaska E43]
Length = 728
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 215/346 (62%), Gaps = 23/346 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA +G +++ +AAGLLHD ++D SY+ + F +A+LV
Sbjct: 37 RESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDTTCSYESMKTIFNEEIANLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAMA D R ++IKLADRLHNM TL +P
Sbjct: 97 GVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPK 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE------CF 174
K++ AKETL+I+ PLA+RLG+S K +LE+L F++L+ D++ +L ++ E +
Sbjct: 151 GKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLHEDEYYQLVEQIAEKRVERETY 210
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
+V EKL+++ D +I GR K YSI+ KM+ K ++++I D+ +R++V
Sbjct: 211 INEVVCYLKEKLDESGIDSDIE-----GRPKHFYSIYKKMINKNKSIEQIFDLTAIRILV 265
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EM
Sbjct: 266 NSVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGNQGKTFEIQIRTFEM 325
Query: 295 HLQAEFGFAAHWRYKEGDCQH----SSFVLQMVEWARWVLTWQCEA 336
H AE+G AAHW+YKEGD F ++V W R +L WQ E
Sbjct: 326 HKTAEYGIAAHWKYKEGDKNEEDKAKDFEKKLV-WLRDMLEWQKET 370
>gi|336437345|ref|ZP_08617051.1| hypothetical protein HMPREF0988_02636 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336005471|gb|EGN35516.1| hypothetical protein HMPREF0988_02636 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 767
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 222/348 (63%), Gaps = 16/348 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D + R FG VA LV
Sbjct: 69 VRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLDDVSREFGEEVALLV 128
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL QLS + ++A+ L MFLAMA D R ++IKLADRLHNM TL+ +
Sbjct: 129 DGVTKLGQLSY-----SQDKLEIQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMR 183
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++ AKET++I+ P+A RLGIS K++L++L K+ P+ + +L L E E
Sbjct: 184 PEKQKEKAKETMDIYAPIAQRLGISKIKIELDDLSLKYSQPEVYQQLVHDLNERKTKREE 243
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V + ++ +K+ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV++
Sbjct: 244 FVQQIVSEVSTHMKNAHIQAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIVDSV 302
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT+EMH
Sbjct: 303 KDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPFEIQIRTEEMHKT 362
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQCEAMSKDR 341
AE+G AAHW+YKEG ++ V+Q E W R +L WQ + MS +R
Sbjct: 363 AEYGIAAHWKYKEGG--DAAKVVQAQEEKLNWLRQILEWQRD-MSDNR 407
>gi|153810165|ref|ZP_01962833.1| hypothetical protein RUMOBE_00546 [Ruminococcus obeum ATCC 29174]
gi|149833344|gb|EDM88425.1| RelA/SpoT family protein [Ruminococcus obeum ATCC 29174]
Length = 776
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 223/347 (64%), Gaps = 15/347 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D +++ + + + F A VA LV+
Sbjct: 80 RKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDAVEDTWMTIEEVEKEFSAEVALLVD 139
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL QLS +A K ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 140 GVTKLGQLS------YSADKVELQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMR 193
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEA 177
K+Q A+ET++I+ P+A RLGIS KV+L++L K+L PD + +L K L + +
Sbjct: 194 PEKQQEKARETMDIYAPIAMRLGISKIKVELDDLSLKYLKPDVYYDLVDKVALRKSERQE 253
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V + +++++Q + + +I V GR K +SI+ KM+ + T+D+I+D++ +R++V+
Sbjct: 254 FVNNIVKQVKQHMDEASIKAQV-DGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRILVDTV 312
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 313 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPFEIQIRTFEMHKT 372
Query: 298 AEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE G + + W R +L WQ + MS +R
Sbjct: 373 AEYGIAAHWKYKESSDGKVPVDKREEEKLNWLRQILEWQKD-MSDNR 418
>gi|424845459|ref|ZP_18270070.1| (p)ppGpp synthetase, RelA/SpoT family [Jonquetella anthropi DSM
22815]
gi|363986897|gb|EHM13727.1| (p)ppGpp synthetase, RelA/SpoT family [Jonquetella anthropi DSM
22815]
Length = 762
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/404 (41%), Positives = 225/404 (55%), Gaps = 37/404 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR G+PY++H V A +LA + + + A LLHD L+D + + + FG V LV
Sbjct: 82 MRMGGEPYIIHPVFAASILADMKLDVATLQAALLHDVLEDTECTAEQMRERFGEVVTTLV 141
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +L E+ +A+ L MFL MA D R VLIKLADR HNM +L A+
Sbjct: 142 DGVTKLGKLPFKTFED------YQAENLRKMFLVMAKDIRVVLIKLADRTHNMRSLGAMR 195
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEA 177
K+ R AKETLEI+ PLA+RLGI K LE+L FK+ +P+ + E+ SK+ + EA
Sbjct: 196 RDKQIRTAKETLEIYAPLAHRLGIYQMKRTLEDLAFKYYDPEMYYEIKSKVKKRLPEREA 255
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V A+E L+ L + I + GR K YSI+ KM +KKL++D+++D+ LR+IVE+
Sbjct: 256 VVEQALEILQARLDEMGIKNSI-KGRAKHFYSIYEKMNRKKLSIDQLYDLLALRVIVEDV 314
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY L VVH +W +PG+ DYI PK N YQSLHT V G PLEVQIRT MH +
Sbjct: 315 AQCYSVLGVVHTIWKPIPGQFDDYIANPKNNMYQSLHTTVLGPSGEPLEVQIRTWAMHWR 374
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFP 357
AE+G AAHWRYKEGD H + +EW R L E S++ F
Sbjct: 375 AEYGVAAHWRYKEGDS-HVDDLDSKLEWIRRALEGSDETNSEE---------------FM 418
Query: 358 SHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
D + VFV E D V+ P STV+D
Sbjct: 419 ERLKDDVLT--------SDVFVFTPEGD---VKNLPRGSTVVDF 451
>gi|403384230|ref|ZP_10926287.1| GTP pyrophosphokinase [Kurthia sp. JC30]
Length = 730
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 211/339 (62%), Gaps = 12/339 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R+SG+PY++H V+ A +LA + + V+AG LHD ++D ++ D + FG VA LV
Sbjct: 43 FRSSGEPYIVHPVQVAGILADLQMDPETVSAGFLHDVVEDTEVTRDDLVEQFGEEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ K +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSK------KEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
+ K++R +KETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K EA
Sbjct: 157 VEKQRRISKETLEIFAPLAHRLGISAIKWELEDTALRYLNPQQYYRIVNLMKRKRTEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + ++++ L D +I L GR K +YSI+ KM + +EI+D+ +R++V++
Sbjct: 217 YLKNVMDEIHGQLGDVDIQ-AELSGRPKHIYSIYKKMQSQHKQFNEIYDLLAIRVLVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPYGDPLEVQIRTNEMHNI 335
Query: 298 AEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQC 334
AE+G AAHW YKEG S + + W R +L +Q
Sbjct: 336 AEYGVAAHWAYKEGKNAATEKSDIDSKLTWFREILEFQS 374
>gi|325662331|ref|ZP_08150940.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086134|ref|ZP_08335216.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325471333|gb|EGC74556.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
4_1_37FAA]
gi|330406293|gb|EGG85807.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 767
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 211/338 (62%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + ++LA + + + AG+LHD ++D ++ D I R FGA VA LVE
Sbjct: 68 RKSGEPYIIHPLWVGIILAELEMDKETIVAGILHDAVEDTIMTRDDIEREFGAEVALLVE 127
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS + ++A+ L MFLAM+ D R +++KLADRLHNM T P
Sbjct: 128 GVTKLGQLS---YSKDVDKMELQAENLRKMFLAMSKDIRVIIVKLADRLHNMRTAQFWPP 184
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ET++I+ P+A RLGIS K +L++L K+ P+ +L ++ + E
Sbjct: 185 HKQKEKARETMDIYAPIAQRLGISKIKKELDDLALKYYQPEVFYDLVKQINDRKTEREEF 244
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V ++++ +K+ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV+ +
Sbjct: 245 VQQIVDEVASHMKNADIQAEVY-GRVKHFFSIYKKMVNQDKTVDQVYDLFAVRIIVDTVK 303
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRTKEMH A
Sbjct: 304 DCYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPAGQPFEIQIRTKEMHKTA 363
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQ 333
E+G AAHW+YKE + +Q E W R +L WQ
Sbjct: 364 EYGIAAHWKYKESGDGKKNIAMQEEEKLSWLRQILEWQ 401
>gi|381191174|ref|ZP_09898685.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
gi|380450963|gb|EIA38576.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
Length = 727
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 233/401 (58%), Gaps = 40/401 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++ + + R FG V +V
Sbjct: 42 LRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAPEELERRFGPTVRRIV 101
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EG +K+S+L KLA N + A+ L MF+AMA D R +++KLADRLHN+ TL+ +P
Sbjct: 102 EGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMP 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ LS+++ + E
Sbjct: 159 PEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFASLSARIQATQEARER 218
Query: 178 MVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
++ AI L++ L + + GR K LYSI KM ++ T+++I+D+ +R+
Sbjct: 219 LIQKAIHLLQETLARDELLQSQLQGFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRV 278
Query: 233 IVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 279
I++ ++ CY L +VH LW +PG++KDYI PK NGYQSLHT V
Sbjct: 279 ILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIA 338
Query: 280 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ------ 333
+PLEVQIRT+EMH AE+G AAHW YKEG V + V W + + WQ
Sbjct: 339 LEGLPLEVQIRTREMHRVAEYGIAAHWLYKEG-LTDPEEVKRRVSWLKSIQEWQKEFSSS 397
Query: 334 ---CEAMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 367
EA++KD +G + P P A F+Y
Sbjct: 398 REFVEAVTKD--LLGGRVFVFTPKGRIINLPKGATPVDFAY 436
>gi|428772185|ref|YP_007163973.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium stanieri PCC 7202]
gi|428686464|gb|AFZ46324.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium stanieri PCC 7202]
Length = 747
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 214/340 (62%), Gaps = 15/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL-DDAFLSYDYIFRTFGAGVADLV 60
R SG+ Y++H + A LL +G ++ ++AAG LHD + D+ ++ D+I FG+ V LV
Sbjct: 52 RKSGEAYIIHPIAVAELLRDLGGDAEMIAAGFLHDVVEDNEDITPDHIEELFGSNVRQLV 111
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
E V+KLS+ N ++KT +A+ MFLAMA D R +++KLADRLHNM TLD L
Sbjct: 112 EAVTKLSKF-------NFSNKTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLDFL 164
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
P K++ A ET EIF PLANRLG+ +K +LE+L FK+L+ ++ + S + E E
Sbjct: 165 PSEKQKLIATETKEIFAPLANRLGMWQFKWELEDLSFKYLHSQEYGNIRSLIAERRSDRE 224
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A + I+ + + L NI+ + + GR K LY I+ KM ++K D+I DI LR+IV
Sbjct: 225 ARINQVIDIITKGLHKSNINPIEVKGRPKHLYGIYEKMQRQKKEFDQIFDIAALRVIVNT 284
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+++CYQAL VVH + +PG+ KDYI PK N YQSLHT V PLE+QIRT EMH
Sbjct: 285 KQECYQALAVVHDAFRPIPGRFKDYIGLPKPNLYQSLHTTVVSLNGRPLEIQIRTLEMHH 344
Query: 297 QAEFGFAAHWRYKE-GDCQHSSFV--LQMVEWARWVLTWQ 333
AE+G AAHW+YKE G+ Q+++ Q W R +L WQ
Sbjct: 345 IAEYGIAAHWKYKEAGNSQNANLSNDEQKFTWLRQLLDWQ 384
>gi|204789670|gb|ACI02046.1| hypothetical protein [uncultured bacterium]
Length = 742
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 217/339 (64%), Gaps = 13/339 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A++LA + + + AGLLHD ++D ++ + I R FG VA +V
Sbjct: 45 LRKSGEPYIVHPLCVAIILADLQLDKESIVAGLLHDVVEDTVMTDEDIEREFGPDVALIV 104
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + N +A+ L MF+AMA D R +++KLADRLHNM TL P
Sbjct: 105 DGVTKLEKI-----KYNNDKLEYQAENLRRMFIAMAKDIRVIMVKLADRLHNMRTLSHQP 159
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K++ AKET++I+ PLA RLGIS KV+L++L K+L P+ + +L K+ + EA
Sbjct: 160 EAKQKEIAKETMDIYAPLAQRLGISKVKVELDDLSLKYLEPEVYRDLVDKIAVRKSVREA 219
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V ++++ +A+ I + GR K +SI+ KML + ++D+I+D++ +R+IV++
Sbjct: 220 FVQDIVDEVAEAISAAGIKAQI-DGRVKHFFSIYRKMLNQDKSLDQIYDLFAVRIIVDSI 278
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G+ P E+QIRT +MH
Sbjct: 279 KDCYAALGIIHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLVGKTGTPFEIQIRTYDMHRT 338
Query: 298 AEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHW+YKE G+ S +M W + +L WQ
Sbjct: 339 AEYGIAAHWKYKEASNGNIIKESEAEKM-SWLQQILDWQ 376
>gi|187932883|ref|YP_001885230.1| GTP pyrophosphokinase [Clostridium botulinum B str. Eklund 17B]
gi|187721036|gb|ACD22257.1| RelA/SpoT family protein [Clostridium botulinum B str. Eklund 17B]
Length = 728
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 215/346 (62%), Gaps = 23/346 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA +G +++ +AAGLLHD ++D SY+ + F +A+LV
Sbjct: 37 RESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDTTCSYESMKTIFNEEIANLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAMA D R ++IKLADRLHNM TL +P
Sbjct: 97 GVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPK 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE------CF 174
K++ AKETL+I+ PLA+RLG+S K +LE+L F++L+ D++ +L ++ E +
Sbjct: 151 GKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLHEDEYYKLVEQIAEKRVERETY 210
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
+V EKL+++ D +I GR K YSI+ KM+ K ++++I D+ +R++V
Sbjct: 211 INEVVCYLKEKLDESGIDSDIE-----GRPKHFYSIYKKMINKNKSIEQIFDLTAIRILV 265
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EM
Sbjct: 266 NSVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGNQGKTFEIQIRTFEM 325
Query: 295 HLQAEFGFAAHWRYKEGDCQH----SSFVLQMVEWARWVLTWQCEA 336
H AE+G AAHW+YKEGD F ++V W R +L WQ E
Sbjct: 326 HKTAEYGIAAHWKYKEGDKNEEDKVKDFEKKLV-WLRDMLEWQKET 370
>gi|365873417|ref|ZP_09412950.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
12556]
gi|363983504|gb|EHM09711.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
12556]
Length = 760
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/338 (44%), Positives = 209/338 (61%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +LA + + + A LLHD L+D + + + FG V +V+
Sbjct: 79 RHSGEPYVVHSISVAAILADMELDVDTLCAALLHDVLEDTEIGKEEMQSRFGEDVVTMVD 138
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L+ + E+ +A+ L MFL MA D R VLIKLADRLHNM TL A
Sbjct: 139 GVTKLGKLAFKSMED------YQAENLRKMFLVMAKDIRVVLIKLADRLHNMRTLQAHRR 192
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 178
K+ AKETLEI+ PLA+RLGI K +LE+LCFK L P+ + E+ ++ + EA+
Sbjct: 193 DKQITIAKETLEIYAPLAHRLGIYNVKRELEDLCFKILEPEIYYEIRRRVRKKLPEREAI 252
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A++ L+Q LK++ I L GR K YSI+ KM +K L++++++D+ LR++V
Sbjct: 253 IKQALDVLQQKLKEEGIE-ASLSGRPKHFYSIYEKMRRKNLSLEQLYDLLALRVVVGTVA 311
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CYQ L +VH +W +PG+ DYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 312 ECYQVLGLVHTIWKPIPGQFDDYIANPKSNMYQSLHTTVLGPSGEPLEVQIRTWEMHWLA 371
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW YKEG + + Q + W R VL Q E
Sbjct: 372 EYGIAAHWHYKEGK-RRVDQIDQKLSWIRQVLESQQEG 408
>gi|260655712|ref|ZP_05861185.1| GTP diphosphokinase [Jonquetella anthropi E3_33 E1]
gi|260629629|gb|EEX47823.1| GTP diphosphokinase [Jonquetella anthropi E3_33 E1]
Length = 762
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/404 (41%), Positives = 225/404 (55%), Gaps = 37/404 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR G+PY++H V A +LA + + + A LLHD L+D + + + FG V LV
Sbjct: 82 MRMGGEPYIIHPVFAASILADMKLDVATLQAALLHDVLEDTECTAEQMRERFGEVVTTLV 141
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +L E+ +A+ L MFL MA D R VLIKLADR HNM +L A+
Sbjct: 142 DGVTKLGKLPFKTFED------YQAENLRKMFLVMAKDIRVVLIKLADRAHNMRSLGAMR 195
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEA 177
K+ R AKETLEI+ PLA+RLGI K LE+L FK+ +P+ + E+ SK+ + EA
Sbjct: 196 RDKQIRTAKETLEIYAPLAHRLGIYQMKRTLEDLAFKYYDPEMYYEIKSKVKKRLPEREA 255
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V A+E L+ L + I + GR K YSI+ KM +KKL++D+++D+ LR+IVE+
Sbjct: 256 VVEQALEILQARLDEMGIKNSI-KGRAKHFYSIYEKMNRKKLSIDQLYDLLALRVIVEDV 314
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY L VVH +W +PG+ DYI PK N YQSLHT V G PLEVQIRT MH +
Sbjct: 315 AQCYSVLGVVHTIWKPIPGQFDDYIANPKNNMYQSLHTTVLGPSGEPLEVQIRTWAMHWR 374
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFP 357
AE+G AAHWRYKEGD H + +EW R L E S++ F
Sbjct: 375 AEYGVAAHWRYKEGDS-HVDDLDSKLEWIRRALEGSDETNSEE---------------FM 418
Query: 358 SHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
D + VFV E D V+ P STV+D
Sbjct: 419 ERLKDDVLT--------SDVFVFTPEGD---VKNLPRGSTVVDF 451
>gi|386359779|ref|YP_006058024.1| RelA/SpoT family (p)ppGpp synthetase [Thermus thermophilus JL-18]
gi|383508806|gb|AFH38238.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus thermophilus JL-18]
Length = 724
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 233/401 (58%), Gaps = 40/401 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++ + + R FG V +V
Sbjct: 39 LRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAPEELERRFGPTVRRIV 98
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EG +K+S+L KLA N + A+ L MF+AMA D R +++KLADRLHN+ TL+ +P
Sbjct: 99 EGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMP 155
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ LS+++ + E
Sbjct: 156 PEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFASLSARIQATQEARER 215
Query: 178 MVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
++ AI L++ L + + GR K LYSI KM ++ T+++I+D+ +R+
Sbjct: 216 LIQKAIHLLQETLTRDELLQSQLQGFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRV 275
Query: 233 IVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 279
I++ ++ CY L +VH LW +PG++KDYI PK NGYQSLHT V
Sbjct: 276 ILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIA 335
Query: 280 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ------ 333
+PLEVQIRT+EMH AE+G AAHW YKEG V + V W + + WQ
Sbjct: 336 LEGLPLEVQIRTREMHRVAEYGIAAHWLYKEG-LTDPEEVKRRVSWLKSIQEWQKEFSSS 394
Query: 334 ---CEAMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 367
EA++KD +G + P P A F+Y
Sbjct: 395 REFVEAVTKD--LLGGRVFVFTPKGRIINLPKGATPVDFAY 433
>gi|46199657|ref|YP_005324.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|384431896|ref|YP_005641256.1| (p)ppGpp synthetase I SpoT/RelA [Thermus thermophilus SG0.5JP17-16]
gi|46197283|gb|AAS81697.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|333967364|gb|AEG34129.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus thermophilus
SG0.5JP17-16]
Length = 727
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 233/401 (58%), Gaps = 40/401 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++ + + R FG V +V
Sbjct: 42 LRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAPEELERRFGPTVRRIV 101
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EG +K+S+L KLA N + A+ L MF+AMA D R +++KLADRLHN+ TL+ +P
Sbjct: 102 EGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMP 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ LS+++ + E
Sbjct: 159 PEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFASLSARIQATQEARER 218
Query: 178 MVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
++ AI L++ L + + GR K LYSI KM ++ T+++I+D+ +R+
Sbjct: 219 LIQKAIHLLQETLARDELLQSQLQGFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRV 278
Query: 233 IVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 279
I++ ++ CY L +VH LW +PG++KDYI PK NGYQSLHT V
Sbjct: 279 ILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIA 338
Query: 280 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ------ 333
+PLEVQIRT+EMH AE+G AAHW YKEG V + V W + + WQ
Sbjct: 339 LEGLPLEVQIRTREMHRVAEYGIAAHWLYKEG-LTDPEEVKRRVSWLKSIQEWQKEFSSS 397
Query: 334 ---CEAMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 367
EA++KD +G + P P A F+Y
Sbjct: 398 REFVEAVTKD--LLGGRVFVFTPKGRIINLPKGATPVDFAY 436
>gi|355673973|ref|ZP_09059325.1| hypothetical protein HMPREF9469_02362 [Clostridium citroniae
WAL-17108]
gi|354814096|gb|EHE98697.1| hypothetical protein HMPREF9469_02362 [Clostridium citroniae
WAL-17108]
Length = 761
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 216/338 (63%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D ++ D + + FG+ V+ LV+
Sbjct: 62 RKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTIMTLDQLTKEFGSEVSFLVD 121
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QL+ + ++AD L MFLAMA D R ++IKLADRLHNM T
Sbjct: 122 GVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLADRLHNMRTGQYWKP 176
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAM 178
K++ A+ET+EI+ P+A+RLGIS K++L++L K L P+ + +L K L + E
Sbjct: 177 EKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLKPEVYYDLVEKVDLRKDARETF 236
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +++++ +K+ + V GR K +SI+ KM+ + T+D+I+D++ +R++VE +
Sbjct: 237 VQEIVDEVKSHMKEAGVEATV-GGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIMVETVK 295
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 296 DCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGGNGQPFEIQIRTYEMHRTA 355
Query: 299 EFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW+YKE G Q S ++ W R +L WQ
Sbjct: 356 EYGIAAHWKYKESGSGQVQAGSEEAKL-SWLRQILEWQ 392
>gi|386828714|ref|ZP_10115821.1| (p)ppGpp synthetase, RelA/SpoT family [Beggiatoa alba B18LD]
gi|386429598|gb|EIJ43426.1| (p)ppGpp synthetase, RelA/SpoT family [Beggiatoa alba B18LD]
Length = 734
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/403 (40%), Positives = 223/403 (55%), Gaps = 29/403 (7%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H + A +LA +G ++ V+ A +LH+ LD F S + I FG V +L++
Sbjct: 54 RPSGEPYLIHVLTVADILADLGMDTDVLVAAILHEALDQHF-SLETIQNRFGKVVTNLLD 112
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ + L + ++ EA+ L M LAM D R VLIKLADRLHNM TL LP+
Sbjct: 113 GVNKMRFIDNLIEYQKFSEESQEAEGLRKMLLAMVEDVRVVLIKLADRLHNMRTLKHLPI 172
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
++RFA++TL+IFVPLANRLGI K +LE+L ++L+ D++ E++ KL E E
Sbjct: 173 DVQKRFAQDTLDIFVPLANRLGIWQIKWELEDLALRYLHADEYQEIARKLDEKRVDRERY 232
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+ L++ L+ I V+ GR K +YSI KM KK L D I+DI +R++V N
Sbjct: 233 IAQVIQILQEELRQAGIKGDVM-GRPKHIYSIWRKMQKKNLDFDRIYDIRAVRVLVHNVH 291
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL ++H W +P + DYI+ PK N YQSLHT V G EVQIRT+ MH A
Sbjct: 292 DCYLALGLIHSKWKHLPSEFDDYISNPKPNNYQSLHTAVYGPEDKVFEVQIRTEAMHHHA 351
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPS 358
E G A+HWRYKE + Q + W R VL + E D + D K
Sbjct: 352 ELGVASHWRYKENSLGYDKNFEQKIGWLRKVLKMKEENTEGDVDFI---DQFKSEIL--- 405
Query: 359 HADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
DD + PQ V + PT ST +D
Sbjct: 406 --DDRVYVMSPQG----------------KVLDLPTGSTPLDF 430
>gi|366164520|ref|ZP_09464275.1| (p)ppGpp synthetase I SpoT/RelA [Acetivibrio cellulolyticus CD2]
Length = 725
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 212/338 (62%), Gaps = 14/338 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P+++H +E A +LA + + T + AG+LHDT++D +Y+ + FG VA LV+
Sbjct: 40 RVSGEPFIMHPMEVANILAELELDCTAIVAGILHDTIEDTTYTYEQLKDKFGEEVALLVD 99
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +A+ L MFLAM+ D R +LIKLADRLHNM TL +
Sbjct: 100 GVTKLGKIPYTTKEEQ------QAENLRKMFLAMSKDIRVILIKLADRLHNMRTLKYMAP 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P + +L K+ + E
Sbjct: 154 EKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDPKGYYDLVDKIAKKRRER--E 211
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ IE++ LK++ + L GR K YSI+ KM ++ T+D+I+D++ R+IV +
Sbjct: 212 AYIEQIVLTLKERIAELGIEVRLDGRPKHFYSIYRKMEQQTKTLDQIYDLFAFRIIVSSV 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH+++ +PG+ KDYI PK N YQSLHT V G VP E+QIRT +MH
Sbjct: 272 KDCYAVLGLVHEIYKPMPGRFKDYIAMPKPNMYQSLHTTVIGPEGVPFEIQIRTWDMHRV 331
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G AAHW+YKEG S + W R +L WQ E
Sbjct: 332 AEVGIAAHWKYKEGSKGDSDD--NKLAWLRQLLDWQKE 367
>gi|55981686|ref|YP_144983.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB8]
gi|55773099|dbj|BAD71540.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (ppGpp
synthase) [Thermus thermophilus HB8]
Length = 727
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 233/401 (58%), Gaps = 40/401 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++ + + R FG V +V
Sbjct: 42 LRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAPEELERRFGPTVRRIV 101
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EG +K+S+L KLA N + A+ L MF+AMA D R +++KLADRLHN+ TL+ +P
Sbjct: 102 EGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMP 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ LS+++ + E
Sbjct: 159 PEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFASLSARIQATQEARER 218
Query: 178 MVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
++ AI L++ L + + GR K LYSI KM ++ T+++I+D+ +R+
Sbjct: 219 LIQRAIHLLQETLARDELLQSQLQGFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRV 278
Query: 233 IVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 279
I++ ++ CY L +VH LW +PG++KDYI PK NGYQSLHT V
Sbjct: 279 ILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIA 338
Query: 280 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ------ 333
+PLEVQIRT+EMH AE+G AAHW YKEG V + V W + + WQ
Sbjct: 339 LEGLPLEVQIRTREMHRVAEYGIAAHWLYKEG-LTDPEEVKRRVSWLKSIQEWQKEFSSS 397
Query: 334 ---CEAMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 367
EA++KD +G + P P A F+Y
Sbjct: 398 REFVEAVTKD--LLGGRVFVFTPKGRIINLPKGATPVDFAY 436
>gi|153854672|ref|ZP_01995922.1| hypothetical protein DORLON_01920 [Dorea longicatena DSM 13814]
gi|149752776|gb|EDM62707.1| RelA/SpoT family protein [Dorea longicatena DSM 13814]
Length = 781
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 219/346 (63%), Gaps = 13/346 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAG+LHD ++D + + I R FG VA LV+
Sbjct: 83 RKSGEPYIIHPLWVAIILADLEMDKETIAAGMLHDVVEDTKFTEEDIRREFGDEVALLVD 142
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +LS ++ V+A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 143 GVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMTP 197
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K++ AKET++I+ P+A RLGIS K +L++L K+ P+ +L +++ + E
Sbjct: 198 AKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFYDLVNQINARKTEREEF 257
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E++ +K+ NI V GR K +SI+ KM+ + T+D+I+D++ +R+IVE+ +
Sbjct: 258 VEQIVEEVSTHMKNANIKAEV-NGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIVESVK 316
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P E+QIRT+EMH A
Sbjct: 317 DCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQPFEIQIRTEEMHKTA 376
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDR 341
E+G AAHW+YKE + S Q E W R +L WQ + MS +R
Sbjct: 377 EYGIAAHWKYKESNDGKKSVEAQEEEKLSWLRQILEWQRD-MSDNR 421
>gi|403744544|ref|ZP_10953770.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122078|gb|EJY56326.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 725
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 208/337 (61%), Gaps = 11/337 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A +LA + ++T V A LLHD ++D ++ I +TFGA VA LV
Sbjct: 44 VRMSGEPYITHPLAVAYILADLQLDATAVVAALLHDVVEDTSVTDSNIVQTFGAEVASLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +RE +A+ L MF+AMA D R ++IKLADRLHNM TL
Sbjct: 104 DGVTKLKRIRFDSREEQ------QAENLRKMFMAMARDIRVLIIKLADRLHNMRTLRYQT 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
+ R A+ETLEIF PLA+RLGI+T K +LE++ ++LNP Q+ + + + E
Sbjct: 158 PATQMRKARETLEIFAPLAHRLGINTIKWELEDISLRYLNPQQYYRIVNLMARKRQEREQ 217
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L Q L + N+ V GR K +YSI+ KM + +EI+D++ +R+ VE+
Sbjct: 218 FIEGVMDVLRQKLGELNLKAEV-SGRAKHIYSIYRKMTTQHKEFNEIYDLFAIRVTVESI 276
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L VVH +W +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 277 KDCYGVLGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTVIGPNGEPLEIQIRTWEMHQT 336
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHW YKE G + + + W R VL WQ
Sbjct: 337 AEYGIAAHWVYKESGSRRVEDDFAKKLAWFREVLEWQ 373
>gi|419860937|ref|ZP_14383577.1| GTP pyrophosphokinase [Corynebacterium diphtheriae bv. intermedius
str. NCTC 5011]
gi|387982621|gb|EIK56122.1| GTP pyrophosphokinase [Corynebacterium diphtheriae bv. intermedius
str. NCTC 5011]
Length = 759
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + FGA VA LV
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLEDLTADFGAEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L LK+ +I V+ GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 242 YLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEIFDLVGIRVLVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|160878706|ref|YP_001557674.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium phytofermentans ISDg]
gi|160427372|gb|ABX40935.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium phytofermentans ISDg]
Length = 813
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 220/339 (64%), Gaps = 13/339 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A++LA + + + AG+LHD ++D L+ + + FG VA LV
Sbjct: 115 LRKSGEPYIIHPLCVAIILAELELDKETIVAGILHDVVEDTVLTVSELTKEFGEEVALLV 174
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL+QL N + K ++A+ L MFLAMA D R +LIKLADRLHNM T+
Sbjct: 175 DGVTKLTQL------NYSKDKVEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQYQ 228
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE-- 176
K+ ++ET++I+ P+A RLGIS K++L++L ++L P+ + EL+ K+ +E
Sbjct: 229 TPKKQIEKSRETMDIYAPIAQRLGISMIKIELDDLSLQYLEPEVYKELNEKIASKKEERE 288
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A + S +E + + + + NIS + GR K +SI+ KM+ + T+++I+D++ +R++V+
Sbjct: 289 AFINSIVEDVGKHIAEANISAKI-DGRVKHFFSIYKKMVNQGKTLEQIYDLFAVRIVVDT 347
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 348 VKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPFEIQIRTFEMHR 407
Query: 297 QAEFGFAAHWRYKEG-DCQHSSFVLQM-VEWARWVLTWQ 333
AE+G AAHW+YKEG D +++ + + W R +L WQ
Sbjct: 408 TAEYGIAAHWKYKEGHDGKNTRDTEEAKLTWLRQILEWQ 446
>gi|317153777|ref|YP_004121825.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944028|gb|ADU63079.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
Length = 726
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 214/345 (62%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A LLA + + VAAGLLHDT++D S D I FG+ VAD+V
Sbjct: 38 VRRSGEPYISHPMNVAYLLAEMQLDEATVAAGLLHDTVEDTQASVDEIEEFFGSDVADIV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+K+SQ+ + SK V+ A+ + + LAMA D R +++KLADRLHNM TL+ +
Sbjct: 98 DGVTKISQM-------DFESKAVQQAENIRKLILAMAEDIRVLMVKLADRLHNMRTLEFM 150
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
K++ A+ET +I+ PLANRLG+ K +LE+LC ++L PD +LS + E E
Sbjct: 151 KPVKQRLIAQETQDIYAPLANRLGLHRVKTELEDLCLRYLKPDVFDQLSQAVSEHRASGE 210
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I+ + LK I V GR K L+SIH KM ++ LT DEI+D+ R+I+E+
Sbjct: 211 PYIDKVIDLINDMLKKNKIKGRVY-GRTKHLHSIHVKMEQQGLTFDEIYDLIAFRIILES 269
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY L ++H +W VPG+ KDYI+ PK N YQSLH+ V G +EVQIRT+EM+
Sbjct: 270 VKDCYAVLGLIHSIWRPVPGRFKDYISIPKANMYQSLHSTVIGPDGERIEVQIRTEEMNR 329
Query: 297 QAEFGFAAHWRYKE---GDCQHSSFVLQMVE---WARWVLTWQCE 335
AE+G AAHW+YKE G + S + E W R ++ WQ E
Sbjct: 330 IAEYGVAAHWQYKEVGKGSKRARSADTRDAERYTWLRQIMDWQRE 374
>gi|451819384|ref|YP_007455585.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451785363|gb|AGF56331.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 737
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 213/347 (61%), Gaps = 21/347 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +LA +G ++ + AGLLHD ++D SY+ + F + +L+E
Sbjct: 37 RQSGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTEFSYEETVKLFNEEIGNLIE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L ++ + +AD + M LAMA D R ++IKLADRLHNM TL +P
Sbjct: 97 GVTKLTRLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPE 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE------CF 174
K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ ++ EL + E +
Sbjct: 154 KKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKEYYELVDSIAEKRVERETY 213
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
+ +V KL+ A + +I GR K YSI+ KM+ K ++++I D+ +R++V
Sbjct: 214 IKDIVDDLYAKLQAAGIESDID-----GRPKHFYSIYKKMVNKNKSIEQIFDLTAIRILV 268
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EM
Sbjct: 269 NSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGKTFEIQIRTFEM 328
Query: 295 HLQAEFGFAAHWRYKEGDC-----QHSSFVLQMVEWARWVLTWQCEA 336
H AE+G AAHW+YKEGD + F ++V W R +L WQ E
Sbjct: 329 HKTAEYGIAAHWKYKEGDTSKGEDKQKDFEKKLV-WLRDMLEWQKET 374
>gi|452995059|emb|CCQ93294.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium ultunense Esp]
Length = 723
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 208/341 (60%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASGDPY+ H + A +LA + + +++A LLHD ++D + D + + FG VA+LV
Sbjct: 37 LRASGDPYITHPLAVAGILADLHMDHVILSAALLHDVVEDTHATLDQVRQEFGVEVAELV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ M LAMA D R +LIKLADRLHNM TL
Sbjct: 97 DGVTKLRRIKYKSQEEQ------QAENHRKMLLAMAKDVRVILIKLADRLHNMRTLKYRS 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
++R A ETLEIF P+A+RLGIST K +LE++ +++NP Q+ + K E
Sbjct: 151 EEDQRRIANETLEIFAPIAHRLGISTIKWELEDISLRYINPQQYYRIVHLMKKKRAEREK 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +E++ L+D I + GR K +YSI+ KM + +EI+D+ +R+IVEN
Sbjct: 211 YIEKVMEEIRVKLEDLGIK-CDISGRPKHIYSIYRKMFLQHKEFNEIYDLLAIRIIVENV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L VVH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRT+EMH
Sbjct: 270 RDCYAVLGVVHTLWKPMPGRFKDYIAMPKANLYQSLHTTVIGPEGEPLEVQIRTQEMHRT 329
Query: 298 AEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG + + Q + W R +L +Q E+
Sbjct: 330 AEYGIAAHWAYKEGKRLKGNDKYGEQRLSWFRELLEYQQES 370
>gi|38233953|ref|NP_939720.1| GTP pyrophosphokinase [Corynebacterium diphtheriae NCTC 13129]
gi|376293379|ref|YP_005165053.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC02]
gi|38200214|emb|CAE49898.1| GTP pyrophosphokinase [Corynebacterium diphtheriae]
gi|372110702|gb|AEX76762.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC02]
Length = 759
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + FGA VA LV
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLEDLTADFGAEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L LK+ +I V+ GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 242 YLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEIFDLVGIRVLVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|375291020|ref|YP_005125560.1| GTP pyrophosphokinase [Corynebacterium diphtheriae 241]
gi|375293231|ref|YP_005127770.1| GTP pyrophosphokinase [Corynebacterium diphtheriae INCA 402]
gi|376242956|ref|YP_005133808.1| GTP pyrophosphokinase [Corynebacterium diphtheriae CDCE 8392]
gi|376245851|ref|YP_005136090.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC01]
gi|376254443|ref|YP_005142902.1| GTP pyrophosphokinase [Corynebacterium diphtheriae PW8]
gi|376290560|ref|YP_005162807.1| GTP pyrophosphokinase [Corynebacterium diphtheriae C7 (beta)]
gi|371580691|gb|AEX44358.1| GTP pyrophosphokinase [Corynebacterium diphtheriae 241]
gi|371582902|gb|AEX46568.1| GTP pyrophosphokinase [Corynebacterium diphtheriae INCA 402]
gi|372103956|gb|AEX67553.1| GTP pyrophosphokinase [Corynebacterium diphtheriae C7 (beta)]
gi|372106198|gb|AEX72260.1| GTP pyrophosphokinase [Corynebacterium diphtheriae CDCE 8392]
gi|372108481|gb|AEX74542.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC01]
gi|372117527|gb|AEX69997.1| GTP pyrophosphokinase [Corynebacterium diphtheriae PW8]
Length = 759
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + FGA VA LV
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLEDLTADFGAEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L LK+ +I V+ GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 242 YLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEIFDLVGIRVLVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|164687521|ref|ZP_02211549.1| hypothetical protein CLOBAR_01162 [Clostridium bartlettii DSM
16795]
gi|164603295|gb|EDQ96760.1| RelA/SpoT family protein [Clostridium bartlettii DSM 16795]
Length = 736
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/338 (44%), Positives = 213/338 (63%), Gaps = 13/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H + A +LA + + V+AAGLLHD ++D +Y+ I FG +ADLV
Sbjct: 40 FRKSGEPYIIHPIAVANILADLELDMEVIAAGLLHDVVEDTPYTYEDIKELFGKDIADLV 99
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +E + +A+ L MFLAMA D R +LIKLADRLHNM TL +P
Sbjct: 100 DGVTKLGKIKYQTKEES------QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMP 153
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
K + AKETLEI+ +A+R+GIS K +LE+L K+++P+ + EL+ K+ +
Sbjct: 154 EEKAKYKAKETLEIYGGIAHRIGISKIKWELEDLALKYIDPEGYRELAEKI--TMKRSQR 211
Query: 180 TSAIEKLEQALKDKNISFLVLC---GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
I+K+ + L+DK + C GR K YSI+ KM KK T +EI+D+ +R+IV
Sbjct: 212 QEYIDKIVRLLQDKFKEVDIDCEVSGRPKHFYSIYKKMKKKHKTFEEIYDLTAVRIIVNT 271
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY L +VH +W +PG+ KDYI PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 272 IKDCYAVLGMVHTMWIPMPGRFKDYIAMPKPNLYQSLHTTVIGPDGEPVEIQIRTHEMHE 331
Query: 297 QAEFGFAAHWRYKEG-DCQHSSFVLQMVEWARWVLTWQ 333
AE G AAHW+YKEG H + + Q ++W R ++ W+
Sbjct: 332 IAENGIAAHWKYKEGITGSHDAKMEQKLKWLRQMMEWE 369
>gi|383787986|ref|YP_005472554.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
gi|381363622|dbj|BAL80451.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
Length = 682
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 214/340 (62%), Gaps = 11/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + A++LA + ++ AA LLHD ++D ++ + I FG VA LV
Sbjct: 42 RESGEEYIIHPLNVAIILANLKLDAETYAAALLHDVIEDTNVTLEDIKSQFGETVAFLVN 101
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL + ++ E + L M LAMA D R VLIKLADRLHNM TL+ LP
Sbjct: 102 GVTKLRGIKSVSTEE------AHLESLRKMLLAMAQDVRVVLIKLADRLHNMRTLNYLPS 155
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
+++ AKET++I+VPLA+RLGI T K +LE+L F++L P+++ EL+ K+ + +E A
Sbjct: 156 ERQKEIAKETMDIYVPLAHRLGIYTMKWELEDLSFRYLEPEKYYELARKVAKKREEREAY 215
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E+L LK+ IS +V GR K+LY I+ KM++ +EI+DI LR+IV++
Sbjct: 216 VNELMEELRNLLKEHGISGIV-EGRPKNLYGIYRKMIRDGKQFEEIYDIIALRIIVDDIP 274
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CYQ L +V+ + VPG++KDYI PK N Y+SLHT V + P E+QIRT+EMH
Sbjct: 275 TCYQVLGIVNNYYKLVPGRIKDYIAMPKPNFYRSLHTTVITKSGEPFEIQIRTREMHEID 334
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
E G AAHW+YKEG ++ + + W R +L WQ E S
Sbjct: 335 EMGIAAHWKYKEGKSLDKNYEAK-IAWLRQMLEWQKEVRS 373
>gi|376248640|ref|YP_005140584.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC04]
gi|372115208|gb|AEX81266.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC04]
Length = 759
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + FGA VA LV
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLEDLTADFGAEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L LK+ +I V+ GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 242 YLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEIFDLVGIRVLVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|376251442|ref|YP_005138323.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC03]
gi|376257255|ref|YP_005145146.1| GTP pyrophosphokinase [Corynebacterium diphtheriae VA01]
gi|372112946|gb|AEX79005.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC03]
gi|372119772|gb|AEX83506.1| GTP pyrophosphokinase [Corynebacterium diphtheriae VA01]
Length = 759
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + FGA VA LV
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLEDLTADFGAEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L LK+ +I V+ GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 242 YLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEIFDLVGIRVLVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|295108479|emb|CBL22432.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus obeum A2-162]
Length = 789
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 223/347 (64%), Gaps = 15/347 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D +++ + + + F A VA LV+
Sbjct: 94 RKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDAVEDTWMTTEEVEKEFSAEVALLVD 153
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL QLS +A K ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 154 GVTKLGQLS------YSADKVELQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMR 207
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEA 177
K+Q A+ET++I+ P+A RLGIS KV+L++L K+L PD + +L +K L + +
Sbjct: 208 PEKQQEKARETMDIYAPIAMRLGISKIKVELDDLSLKYLKPDVYYDLVNKVALRKSERQE 267
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V + +++++Q + + I V GR K +SI+ KM+ + T+D+I+D++ +R++V+
Sbjct: 268 FVNNIVKQVKQHMDEAAIKAQV-DGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRILVDTV 326
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 327 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQPFEIQIRTFEMHKT 386
Query: 298 AEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE G + + W R +L WQ + MS +R
Sbjct: 387 AEYGIAAHWKYKESSDGKVPVDKREEEKLNWLRQILEWQRD-MSDNR 432
>gi|83590516|ref|YP_430525.1| (p)ppGpp synthetase SpoT/RelA [Moorella thermoacetica ATCC 39073]
gi|83573430|gb|ABC19982.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Moorella
thermoacetica ATCC 39073]
Length = 717
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 202/337 (59%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H ++ A +LA + + +AA LLHD ++D +S D I FG VA LV+
Sbjct: 38 RRSGEDYITHPLQVAAILAELQLDVVTIAAALLHDVVEDTPVSLDTIKELFGEEVALLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+L +E +A+ L MFL MA D R +LIKLADRLHNM TL P
Sbjct: 98 GVTKLSRLEYKTKEEQ------QAETLRKMFLTMAQDIRVILIKLADRLHNMRTLKYHPP 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
K+Q A+ETLEIF PLA+RLGI K +LE+ ++L P+++ EL S + E
Sbjct: 152 EKQQEIARETLEIFAPLAHRLGIFRLKWELEDQSLRYLEPERYYELVNSINMKRREREEY 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ L Q L + I + GR K YSI+ KM+K+ + EI+D+ +R+IV+ +
Sbjct: 212 IRQVVDILRQKLDEAGIKADI-QGRPKHFYSIYNKMVKQGKELSEIYDLIAVRVIVDTVK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY L VVH +W +PG+ KDY+ PK N YQSLHT V G P E+QIRT EMH A
Sbjct: 271 ECYAVLGVVHAIWKPIPGRFKDYVAMPKPNMYQSLHTTVIGPNGDPFEIQIRTWEMHRTA 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEG Q + W R +L WQ E
Sbjct: 331 EYGIAAHWRYKEGGGTSDREFEQKLTWLRQLLDWQRE 367
>gi|376287865|ref|YP_005160431.1| GTP pyrophosphokinase [Corynebacterium diphtheriae BH8]
gi|371585199|gb|AEX48864.1| GTP pyrophosphokinase [Corynebacterium diphtheriae BH8]
Length = 759
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + FGA VA LV
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLEDLTADFGAEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L LK+ +I V+ GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 242 YLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEIFDLVGIRVLVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|374300791|ref|YP_005052430.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio africanus str.
Walvis Bay]
gi|332553727|gb|EGJ50771.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio africanus str.
Walvis Bay]
Length = 716
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 205/338 (60%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H +E A +LA + + + + LLHDT++D + D I FG VA +V+
Sbjct: 39 RLSGEPYMSHPLEVANILADMRLDEFAIVSALLHDTVEDTKATVDEIESKFGKEVAHIVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+S+++ +A+ + M +AMA D R ++IKLADRLHNM TLD
Sbjct: 99 GVTKISKMT------FETKAQAQAENIRKMIVAMAEDIRVIMIKLADRLHNMRTLDFQKS 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE---A 177
K++R A+ETL+I+ PLANRLG+ K +LE+LCF + PD + +L K VE + +
Sbjct: 153 EKQKRIAQETLDIYAPLANRLGLHFIKTELEDLCFMYTRPDAYGQLK-KGVEHYQDIGHE 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ L L I VL GR K LYSIH KML++ LT+D+++D+ R+IV
Sbjct: 212 YIAKVIDLLNDMLGRNKIKGRVL-GRTKHLYSIHNKMLQQSLTLDQVYDLMAFRVIVSTI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L VH +W VPG+ KDYI+ PK N YQSLHT V G +E+QIRT+EMH
Sbjct: 271 RDCYAVLGEVHSIWKPVPGRFKDYISMPKPNMYQSLHTTVIGPDGERIEIQIRTEEMHRL 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG V + W R +L WQ E
Sbjct: 331 AEYGVAAHWQYKEGGGGKPRDV-ERFSWLREILDWQKE 367
>gi|428313851|ref|YP_007124828.1| RelA/SpoT family (p)ppGpp synthetase [Microcoleus sp. PCC 7113]
gi|428255463|gb|AFZ21422.1| (p)ppGpp synthetase, RelA/SpoT family [Microcoleus sp. PCC 7113]
Length = 751
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/340 (44%), Positives = 211/340 (62%), Gaps = 14/340 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASG+PY+ H V A LL +G +S ++AAG LHD ++D ++ + I FG V LV
Sbjct: 55 LRASGEPYIAHPVAVAGLLRDLGGSSVMIAAGFLHDVVEDTDVTPEEIESRFGVEVRRLV 114
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
EGV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 115 EGVTKLSKF-------NFSSKTERQAENFRRMFLAMAADIRVIVVKLADRLHNMRTLEHL 167
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
K++ ++ET EIF PLANRLGI K +LE+L FK+L P+ + ++ + E E
Sbjct: 168 NPQKQRSISQETREIFAPLANRLGIGRVKWELEDLAFKYLEPESYRQMQQLVAERRTDRE 227
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
++ + L + L+ I L + GR K LY I+ KM +++ EI+D+ +RLI++
Sbjct: 228 TRLSKVGDILRERLESTEIHCLEISGRPKHLYGIYQKMQRQQKGFHEIYDLAAMRLILQT 287
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+EDCY+AL +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH
Sbjct: 288 KEDCYRALAIVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVMGPSGRPIEVQIRTLEMHH 347
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQ 333
AE+G AAHW+YKE ++ + E W R +L WQ
Sbjct: 348 IAEYGIAAHWKYKESGGSSNNRISAEDEKFTWLRQLLEWQ 387
>gi|408409949|ref|ZP_11181214.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
gi|407875894|emb|CCK83020.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
Length = 753
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 198/314 (63%), Gaps = 10/314 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D I FGA VA +V+
Sbjct: 44 RASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + K A+ M +AMA D R +L+KLADRLHNM TL+ L
Sbjct: 104 GVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NPD++ ++ S + E
Sbjct: 158 DKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYINPDEYYKIVSMMDAKRSEREGY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AI+ L+ L I + + GR K +YSI+ KM+ K +EI+D+ +R+IV +
Sbjct: 218 IKDAIDYLKGTLDSLGIDYDI-SGRPKHIYSIYKKMVNKHKDFNEIYDLLAVRVIVPTVK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRTKEMH A
Sbjct: 277 DCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTKEMHEVA 336
Query: 299 EFGFAAHWRYKEGD 312
E+G AAHW YK G+
Sbjct: 337 EYGVAAHWAYKRGN 350
>gi|297206072|ref|ZP_06923467.1| GTP diphosphokinase [Lactobacillus jensenii JV-V16]
gi|297149198|gb|EFH29496.1| GTP diphosphokinase [Lactobacillus jensenii JV-V16]
Length = 744
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/318 (45%), Positives = 199/318 (62%), Gaps = 14/318 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D I R FG VA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKREFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + E A+ M +AMA D R +++KLADRLHNM TLD L
Sbjct: 104 GVTKLNKYEYKSHEE------FLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH----TELSSKLVECFDE 176
K +R A ETL+I+ PLA+RLGI T K +LE++ +LNP+ + +++SK E E
Sbjct: 158 DKHRRIASETLDIYAPLADRLGIGTIKWELEDMSLHYLNPEAYYNIVNQMNSKRSER--E 215
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ +AI L+ L +I + + GR K +YSI+ KM+ K EI D+ +R+IV+N
Sbjct: 216 GYIETAIAYLKDTLDSLHIKYDIY-GRPKHIYSIYKKMVNKHKDFSEIFDLLAVRVIVQN 274
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++MH
Sbjct: 275 VRDCYAVLGAVHTKWKPMPGRFKDYIAVPKANGYQSLHTTIIGPGGKPLEIQIRTQQMHE 334
Query: 297 QAEFGFAAHWRYKEGDCQ 314
AE+G AAHW YK+GD Q
Sbjct: 335 VAEYGVAAHWAYKKGDTQ 352
>gi|429730616|ref|ZP_19265262.1| GTP diphosphokinase [Corynebacterium durum F0235]
gi|429147054|gb|EKX90084.1| GTP diphosphokinase [Corynebacterium durum F0235]
Length = 761
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 213/340 (62%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A + A IG ++T + A LLHDT++D S D + FGA VA LV+
Sbjct: 71 RKSGDPYISHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSIDDLEHDFGAEVARLVD 130
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 131 GVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLPP 182
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 183 QKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEIVRLVADRAPSRDRY 242
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+T I+++ ++K+ NI V+ GR K +SI+ KM+ + DEI D+ G+R++V+
Sbjct: 243 LTEIIDQVSASMKENNIPAEVM-GRPKHYWSIYQKMIVRGRDFDEIFDLVGIRILVDTPN 301
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY A+ VH L++ +PG+ KDYI+ P+F YQSLHT V G G PLEVQ+RT +MH A
Sbjct: 302 NCYSAIGAVHALYSAMPGRFKDYISAPRFGVYQSLHTTVMGPGGKPLEVQVRTHDMHFNA 361
Query: 299 EFGFAAHWRYKEGDCQH--SSFVLQMVEWARWVLTWQCEA 336
EFG AAHWRYKE H S + + W R +L WQ EA
Sbjct: 362 EFGIAAHWRYKETKGSHKGSQAEVDQMAWMRQLLDWQKEA 401
>gi|427706762|ref|YP_007049139.1| (p)ppGpp synthetase I SpoT/RelA [Nostoc sp. PCC 7107]
gi|427359267|gb|AFY41989.1| (p)ppGpp synthetase I, SpoT/RelA [Nostoc sp. PCC 7107]
Length = 756
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/341 (44%), Positives = 207/341 (60%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H V A LL +G + ++AAG LHD ++D ++ + I FG+ V LV
Sbjct: 58 FRKSGEPYICHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVTIEEIEELFGSEVRLLV 117
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
EGV+KLS++ N SKT +A+ MFLAMA D R +++KLADRLHNM TL +
Sbjct: 118 EGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYM 170
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
R+R A+ET +IF PLANRLGI K +LE+L FK+L P+ ++ + E E
Sbjct: 171 SEDSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPEAFRQMQQHVSEKRTARE 230
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ A E L + L I L + GR K LYSI+ KM +++ EI+D+ LR+IV+
Sbjct: 231 EKLAKATEILRERLPHAGIHCLDISGRPKHLYSIYQKMQRQQKEFHEIYDLAALRIIVQT 290
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 291 NEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRPLEIQIRTLEMHH 350
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
AE+G AAHW+YKE +S F + W R +L WQ +
Sbjct: 351 IAEYGIAAHWKYKETGGSNSQFTASDEKFTWLRQLLEWQSD 391
>gi|409351741|ref|ZP_11234324.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
gi|407876538|emb|CCK86382.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
Length = 753
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 198/314 (63%), Gaps = 10/314 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D I FGA VA +V+
Sbjct: 44 RASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + K A+ M +AMA D R +L+KLADRLHNM TL+ L
Sbjct: 104 GVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NPD++ ++ S + E
Sbjct: 158 DKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYINPDEYYKIVSMMDAKRSEREGY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AI+ L+ L I + + GR K +YSI+ KM+ K +EI+D+ +R+IV +
Sbjct: 218 IKDAIDYLKGTLDSLGIDYDI-SGRPKHIYSIYKKMVNKHKDFNEIYDLLAVRVIVPTVK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRTKEMH A
Sbjct: 277 DCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTKEMHEVA 336
Query: 299 EFGFAAHWRYKEGD 312
E+G AAHW YK G+
Sbjct: 337 EYGVAAHWAYKRGN 350
>gi|451944338|ref|YP_007464974.1| hypothetical protein A605_08050 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451903725|gb|AGF72612.1| hypothetical protein A605_08050 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 765
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/343 (43%), Positives = 214/343 (62%), Gaps = 18/343 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A + A IG ++T + A LLHDT++D + + FGA VA LV
Sbjct: 70 LRKSGDPYITHPLAVATICAEIGMDTTTLVAALLHDTVEDTDYGLEQLTEEFGAEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMAQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE---CFDE 176
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + D
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEIVRLVADRAPSRDR 241
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A+ ++ ALK+ NI+ V+ GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 242 AL-KEITTQVTAALKENNITAEVM-GRPKHYWSIYQKMIVRGRDFDEIFDLVGIRILVDN 299
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+CY A+ VVH L+A +PG+ KDYI+ P+F YQSLHT V G PLEVQ+RT EMH
Sbjct: 300 VNNCYAAIGVVHALYAALPGRFKDYISSPRFGVYQSLHTTVMAGGGKPLEVQVRTHEMHY 359
Query: 297 QAEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE H + V QM W R +L WQ EA
Sbjct: 360 NAEFGVAAHWRYKETKGNHKGDQAEVDQMA-WMRQLLDWQKEA 401
>gi|189425343|ref|YP_001952520.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter lovleyi SZ]
gi|189421602|gb|ACD96000.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter lovleyi SZ]
Length = 716
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 212/338 (62%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H +E A LLA + + + G LHDT++D + + + FG VA+LV+
Sbjct: 39 RLSGEPYIIHPLEVAGLLAGLKLDVPSIVTGFLHDTIEDTLTTSEELAEMFGKEVAELVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+S++ +E N +A+ M +AMA D R +L+KLADRLHNM TL P
Sbjct: 99 GVTKISKIHFKTKEEN------QAENFRKMLIAMANDIRVILVKLADRLHNMRTLQFQPD 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K++ ++ET++I+ P+A+RLGIS K +LE+L F++L PD + +L++K+ E
Sbjct: 153 TKQRSISRETMDIYAPIAHRLGISWIKTELEDLSFRYLQPDVYFDLATKIQRKKQER--E 210
Query: 181 SAIEKLEQALKDKNISFLVL---CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
S I ++++A++ K + ++ GR K LYSI+ KM K+K+ +EI+D+ LR++V++
Sbjct: 211 SFIHEIQEAIRQKLVEHQIVGEVSGRSKHLYSIYRKMEKRKVDFEEIYDLTALRILVDDI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+ L ++H W +PG+ KDYI PK N YQSLHT V G +EVQIRT EMH
Sbjct: 271 KSCYEVLGLIHSSWRPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGDRMEVQIRTHEMHRV 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 331 AEAGIAAHWKYKEGKGYDEKEVKRFA-WLRQLLEWQQE 367
>gi|19552864|ref|NP_600866.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Corynebacterium glutamicum ATCC 13032]
gi|145295774|ref|YP_001138595.1| hypothetical protein cgR_1699 [Corynebacterium glutamicum R]
gi|417970606|ref|ZP_12611537.1| hypothetical protein CgS9114_06250 [Corynebacterium glutamicum
S9114]
gi|418244314|ref|ZP_12870737.1| hypothetical protein KIQ_02373 [Corynebacterium glutamicum ATCC
14067]
gi|21903460|sp|O87331.2|RELA_CORGL RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|21324422|dbj|BAB99046.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Corynebacterium glutamicum ATCC 13032]
gi|140845694|dbj|BAF54693.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044902|gb|EGV40576.1| hypothetical protein CgS9114_06250 [Corynebacterium glutamicum
S9114]
gi|354511720|gb|EHE84626.1| hypothetical protein KIQ_02373 [Corynebacterium glutamicum ATCC
14067]
gi|385143771|emb|CCH24810.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Corynebacterium glutamicum K051]
Length = 760
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 215/342 (62%), Gaps = 16/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A + A IG ++T + A LLHDT++D S D + R FG VA LV
Sbjct: 70 IRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLDDLTRDFGEEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEIVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ L++ NI+ VL GR K +SI+ KM+ + D+I D+ G+R++V+N
Sbjct: 242 YLKEIIDQVTGGLRENNIAAEVL-GRPKHYWSIYQKMIVRGRDFDDIFDLVGIRILVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L+ +PG+ KDYI+ P+F YQSLHT V G G PLEVQ RT +MH
Sbjct: 301 NNCYAAIGVVHSLFNALPGRFKDYISAPRFGVYQSLHTTVMGPGGKPLEVQARTHDMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQHS---SFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE HS + V QM W R +L WQ EA
Sbjct: 361 AEFGIAAHWRYKETKGSHSGEQAEVDQMA-WMRQLLDWQKEA 401
>gi|406915627|gb|EKD54692.1| hypothetical protein ACD_60C00057G0017 [uncultured bacterium]
Length = 720
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 203/332 (61%), Gaps = 9/332 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R +G+PY+ H V A +LA + + + A +LHD ++D + + FG VADLV+
Sbjct: 39 RHTGEPYITHPVAVAQILATMRMDPPTIIAAILHDVIEDTSVEKPDLIEKFGKEVADLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+Q+ +R +A+ M +AMA D R +L+K+ADRLHNM T+D LPL
Sbjct: 99 GVTKLTQMEFESRAQ------AQAENFRKMIMAMARDIRVILVKIADRLHNMKTIDCLPL 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF-DEAMV 179
KR+R AKETLEIF P+ANRLG+ ++++ E+L F L P ++ L S + + +
Sbjct: 153 EKRRRIAKETLEIFAPIANRLGMHAFRIEFEDLGFSALYPMRYRILKSAVSKALGSRHEI 212
Query: 180 TSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
I+K + +LK NI L GR K +YSI+ KM +K L+ E+ D+YG R+IV+ +
Sbjct: 213 LELIDKEIRNSLKKTNIPIRFLTGREKHIYSIYKKMHEKHLSFSEVMDVYGFRVIVDKLD 272
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY+ L V+H L+ + + KDYI PK NGYQSLHTV+ G VP+EVQIRT+EMH A
Sbjct: 273 TCYRVLGVLHNLYKPLTQRFKDYIAIPKANGYQSLHTVLFGPYGVPIEVQIRTEEMHKMA 332
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVL 330
E+G +AHW YK L+ EW + V+
Sbjct: 333 EYGISAHWLYKTEKSVFGEAQLRAKEWLKGVM 364
>gi|282857439|ref|ZP_06266672.1| GTP diphosphokinase [Pyramidobacter piscolens W5455]
gi|282584724|gb|EFB90059.1| GTP diphosphokinase [Pyramidobacter piscolens W5455]
Length = 816
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 210/343 (61%), Gaps = 11/343 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRASG+PY++H V +LA + + + AGLLHD L+D ++ D + FGA V LV
Sbjct: 135 MRASGEPYVIHPVYVTSILADMRMDLPTLQAGLLHDVLEDTPVTADEMKNRFGATVEMLV 194
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +L E+ +A+ L MFL MA D R VLIKLADR HNM +L AL
Sbjct: 195 DGVTKLGKLPFKTFED------YQAENLRKMFLVMAKDIRVVLIKLADRTHNMRSLGALR 248
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K+QR AKETLEI+ PLA+RLGI K LE+L FK+ +P + ++ ++ + E A
Sbjct: 249 RDKQQRIAKETLEIYAPLAHRLGIYQVKRTLEDLAFKYYDPTMYYDIKRRVKKRLPEREA 308
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V A+E L + L+ I + GR K YSI KM +KKL++++++D+ LR+IV +
Sbjct: 309 IVNQAMEVLGERLRSIGIEAHI-KGRAKHFYSIFEKMNRKKLSVEQLYDLLALRVIVNDV 367
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY L +VH LW +PG+ DYI PK N Y+SLHT V G PLEVQIRT EMH
Sbjct: 368 TTCYTVLGIVHTLWKPIPGQFDDYIANPKNNMYRSLHTTVMGPQGEPLEVQIRTWEMHWL 427
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
AE+G AAHWRYKEG H + Q +EW R L E S++
Sbjct: 428 AEYGVAAHWRYKEGQG-HIDELDQKLEWIRKTLENGPETNSQE 469
>gi|291518572|emb|CBK73793.1| (p)ppGpp synthetase, RelA/SpoT family [Butyrivibrio fibrisolvens
16/4]
Length = 767
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 215/340 (63%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D + + I + F VA+LV+
Sbjct: 71 RKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDVVEDTICTKEEIAQEFSEEVAELVD 130
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL QL N A K ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 131 GVTKLGQL------NYDADKVEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMT 184
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K++ A+ET+EI+ PLA RLGIS K++L++L K+L PD + +L K+ +
Sbjct: 185 PEKQKEKARETMEIYAPLAQRLGISKVKIELDDLSLKYLEPDAYYDLVEKIALRKSQRTD 244
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ S ++ + + + I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++
Sbjct: 245 YINSLVDDVRKHIDAAEIQAEVY-GRAKHFFSIYKKMVNQHKTIDQIYDLFAVRIIVDSI 303
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT V G P E+QIRT +MH
Sbjct: 304 KDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTVIGPNGAPFEIQIRTYDMHRT 363
Query: 298 AEFGFAAHWRYKEGDCQHSSFV--LQMVEWARWVLTWQCE 335
+E+G AAHW+YKE + SS V + + W R +L WQ E
Sbjct: 364 SEYGIAAHWKYKES-GEGSSVVGEEEKLSWLREILEWQQE 402
>gi|226227361|ref|YP_002761467.1| GTP pyrophosphokinase [Gemmatimonas aurantiaca T-27]
gi|226090552|dbj|BAH38997.1| GTP pyrophosphokinase [Gemmatimonas aurantiaca T-27]
Length = 717
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 218/340 (64%), Gaps = 12/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ HC+E A +LA + ++ V +GLLHD ++D ++ + I R FG+ +A +V
Sbjct: 36 VRHSGEPYVSHCIEVARILADLQLDTATVTSGLLHDIVEDTDITVEDIEREFGSEIAQIV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+G++K++ L +RE + + + L++A DAR +LIKLADRLHNM TLD L
Sbjct: 96 DGLTKIANLPMSSREER------QVENYRKLLLSIAKDARVILIKLADRLHNMRTLDWLA 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD---E 176
KR+R A+ET +++ PLA+R G++ + +LE+L FKHL PD + L+ +LV E
Sbjct: 150 PEKRRRIAQETRDLYAPLAHRFGMAKVRWELEDLAFKHLEPDAYKTLA-RLVAAKRGERE 208
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A++ E LE+ L D I+ + + GR K L+SI+ KM ++ ++I+D+ +R+IV N
Sbjct: 209 ALIAQMREPLEKRLTDAGIADVEVTGRPKHLWSIYKKMQQRDRPYEDIYDLLAIRVIVPN 268
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+CY AL V+H W V ++KDYI +PK NGYQSLHT V G G E+QIRT++MH
Sbjct: 269 VLECYHALGVIHDGWTPVQERIKDYIAQPKSNGYQSLHTTVFGPGRQLFEIQIRTRDMHR 328
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
A+FG AAHW YKE + ++S + + + W R VL Q +A
Sbjct: 329 TADFGIAAHWLYKE-NTKNSDELDRHLAWFRQVLELQLDA 367
>gi|229086970|ref|ZP_04219127.1| GTP pyrophosphokinase [Bacillus cereus Rock3-44]
gi|228696346|gb|EEL49174.1| GTP pyrophosphokinase [Bacillus cereus Rock3-44]
Length = 728
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 247/455 (54%), Gaps = 56/455 (12%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLHDVVEDTEVTLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKL+DRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLSDRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-------SSKLVEC 173
K++R A ETLEIF PLA+RLGI+T K +LE+ ++LNP Q+ + ++ E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGINTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T +KL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIRDKLKEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
MH AE+G AAHW YKEG ++ L+ + W R +L WQ E
Sbjct: 332 MHEIAEYGIAAHWAYKEGKAAEATGTLEKKLTWFRQILEWQNET---------------- 375
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 412
S+A++ S K D VFV + D V E P S +D R
Sbjct: 376 -----SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRVH------ 420
Query: 413 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
S G + + ++N K V KLK GD++E+
Sbjct: 421 SEIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 451
>gi|335046678|ref|ZP_08539701.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
gi|363896423|ref|ZP_09322974.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
gi|333760464|gb|EGL38021.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
gi|361960709|gb|EHL13942.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
Length = 755
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 218/342 (63%), Gaps = 20/342 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D ++ + + + F VA LV+
Sbjct: 59 RKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTGMTLEEVEKEFNPDVATLVD 118
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++L+ N+ ++A+ L MF++MA D R ++IKLADRLHN+ TL+
Sbjct: 119 GVTKLTKLNL-----NSDKVEMQAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSP 173
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VECF 174
KR+ A+E+LEI+ PLA+RLGIS K+++++L K+L P+ + +L+ K+ E
Sbjct: 174 EKRKEKARESLEIYSPLADRLGISKIKIEMDDLSLKYLEPEVYYDLADKVHFKREAREDR 233
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
A+V E +E++ + NI GR K +SI+ KM+ + T+D+I+D++ +R+IV
Sbjct: 234 INAIVEEVREHIEESGIEANIK-----GRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIV 288
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
E+ DCY L V+H+++ +PG+ KDYI PK N YQSLHT V G VP E+QIRT EM
Sbjct: 289 ESVRDCYAVLGVIHKMYRPIPGRFKDYIAMPKPNMYQSLHTTVIGRDGVPFEIQIRTFEM 348
Query: 295 HLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
H AEFG AAHW+YKE D + + + ++W +L WQ
Sbjct: 349 HRTAEFGIAAHWKYKEQGGSDKKATETEMSKMKWLHEILEWQ 390
>gi|62390535|ref|YP_225937.1| ppGpp synthetase, ppGpp pyrophosphorylase [Corynebacterium
glutamicum ATCC 13032]
gi|3599974|gb|AAC35494.1| GTP pyrophosphokinase [Corynebacterium glutamicum]
gi|41325873|emb|CAF20036.1| PPGPP SYNTHETASE, PPGPP PYROPHOSPHORYLASE [Corynebacterium
glutamicum ATCC 13032]
Length = 760
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 215/342 (62%), Gaps = 16/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A + A IG ++T + A LLHDT++D S D + R FG VA LV
Sbjct: 70 IRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLDDLTRDFGEEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEIVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ L++ NI+ VL GR K +SI+ KM+ + D+I D+ G+R++V+N
Sbjct: 242 YLKEIIDQVTGGLRENNIAAGVL-GRPKHYWSIYQKMIVRGRDFDDIFDLVGIRILVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L+ +PG+ KDYI+ P+F YQSLHT V G G PLEVQ RT +MH
Sbjct: 301 NNCYAAIGVVHSLFNALPGRFKDYISAPRFGVYQSLHTTVMGPGGKPLEVQARTHDMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQHS---SFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE HS + V QM W R +L WQ EA
Sbjct: 361 AEFGIAAHWRYKETKGSHSGEQAEVDQMA-WMRQLLDWQKEA 401
>gi|417002340|ref|ZP_11941729.1| GTP diphosphokinase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479481|gb|EGC82577.1| GTP diphosphokinase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 726
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 211/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y +H + A L+ + + + AGL+HD L+D ++ D + FG + LV+
Sbjct: 44 RNSGEDYYIHPIAVAKKLSEMKLDDQTICAGLMHDVLEDTDVTRDQMAEVFGEEITFLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL L+ +RE +A+ + M +AM+ D R VLIKL+DRLHNM TL+ +
Sbjct: 104 GVTKLKNLNYTSREEK------QAENIRKMVMAMSNDVRVVLIKLSDRLHNMRTLEYMTR 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K+ + A ETLEI+VPLA+RLGI + K +LE+LCF++ P+++ EL+ + EA
Sbjct: 158 KKQIQIADETLEIYVPLAHRLGIYSLKWELEDLCFRYQEPEKYYELAEMVNVKRREREAY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IE L ++L+ +I+F + GR KSLYSI+ KM + + +EI+D+ +R++V+
Sbjct: 218 INEIIESLSKSLEGTDINFEI-SGRPKSLYSINKKMQRNGIAFEEIYDLTAVRVLVDTIA 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY L VH LW +P ++KDYI +PK NGY+SLHT V G+ P EVQIRT+ MH +
Sbjct: 277 ECYAVLGKVHSLWRPIPNRIKDYIGQPKPNGYRSLHTTVFGDDSRPFEVQIRTRTMHKEC 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKE + S F M + R ++ WQ E
Sbjct: 337 EYGVAAHWRYKENNNTQSDFDDAM-SFLRRIVEWQQEG 373
>gi|374297070|ref|YP_005047261.1| RelA/SpoT family (p)ppGpp synthetase [Clostridium clariflavum DSM
19732]
gi|359826564|gb|AEV69337.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium clariflavum DSM
19732]
Length = 725
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 212/340 (62%), Gaps = 16/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P+++H +E A +LA + + T + AG+LHDT++D +Y+ + FG VA LV+
Sbjct: 40 RVSGEPFIMHPMEVANILAELELDCTAIVAGILHDTIEDTTYTYEQLKEKFGEEVALLVD 99
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +A+ L MFLAM+ D R +LIKLADRLHNM TL +
Sbjct: 100 GVTKLGKIPYTTKEEQ------QAENLRKMFLAMSKDIRVILIKLADRLHNMRTLKYMSP 153
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+ AKETLEI+ P+A+RLGIS K +LE+L ++L+P + +L K+ E
Sbjct: 154 EKQIEKAKETLEIYAPIAHRLGISKIKWELEDLSLRYLDPKGYYDLVDKIANKRRER--E 211
Query: 181 SAIEKLEQALKDKNISFL----VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ IEK+ LK+K IS L L GR K YSI+ KM ++ T+D+I+D++ R+IV+
Sbjct: 212 AYIEKILATLKEK-ISELGIQVRLDGRPKHFYSIYRKMQQQNKTLDQIYDLFAFRVIVDT 270
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY L +VH+++ +PG+ KDYI PK N YQSLHT V G VP E+QIRT EMH
Sbjct: 271 VKDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPDGVPFEIQIRTWEMHR 330
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE G AAHW+YKEG + + W R +L WQ +
Sbjct: 331 VAEVGIAAHWKYKEG--KSGGGYENKLAWLRQLLDWQTDT 368
>gi|225568638|ref|ZP_03777663.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
15053]
gi|225162566|gb|EEG75185.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
15053]
Length = 793
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/348 (41%), Positives = 221/348 (63%), Gaps = 17/348 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAG+LHD ++D +S + I + FG VA LV+
Sbjct: 95 RKSGEPYIVHPLWVAIILANLEMDKETIAAGMLHDVVEDTSVSEEEIKKNFGEEVALLVD 154
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +LS ++ V+A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 155 GVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMTP 209
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP----DQHTELSSKLVECFDE 176
K++ AKET++I+ P+A RLGIS K +L++L K+ P D +++S+ E E
Sbjct: 210 AKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFFDLVNQINSRKTE--RE 267
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
V ++++ +K+ NI V GR K +SI+ KM+ ++ T+D+I+D++ +R+IV++
Sbjct: 268 EFVQQIVDEVSTHMKNANIKADV-NGRVKHFFSIYKKMVNQEKTVDQIYDLFAVRIIVDS 326
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P E+QIRT+EMH
Sbjct: 327 VKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQPFEIQIRTEEMHK 386
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE + S Q E W R +L WQ + MS +R
Sbjct: 387 TAEYGIAAHWKYKESNDGKKSVQAQEEEKLSWLRQILEWQRD-MSDNR 433
>gi|205374215|ref|ZP_03227014.1| GTP diphosphokinase [Bacillus coahuilensis m4-4]
Length = 708
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 213/342 (62%), Gaps = 14/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + ++ VAAG LHD ++D +S I TF VA LV
Sbjct: 19 FRKSGEPYIIHPIQVAGILADLEMDAATVAAGFLHDVVEDTPISKQDIAETFNEEVAMLV 78
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 79 DGVTKLGKIKFKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLP 132
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A ET+EIF PLA+RLGIS K +LE+ ++LNP Q+ + + + + DE
Sbjct: 133 AEKQRRIANETIEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRDEREQ 192
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V I ++E +L+D +I L GR K +YSI+ KM+ + +EI+D+ +R+IV +
Sbjct: 193 YVDDVIHEMEDSLRDVDIH-AELSGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIVNSI 251
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT++MH
Sbjct: 252 KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTRDMHRI 311
Query: 298 AEFGFAAHWRYKEGD---CQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKE ++F ++ W R +L +Q E+
Sbjct: 312 AEYGVAAHWAYKEEKEHVASRNTFDKKL-SWFREILEFQNES 352
>gi|229918416|ref|YP_002887062.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sp. AT1b]
gi|229469845|gb|ACQ71617.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sp. AT1b]
Length = 729
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 210/335 (62%), Gaps = 10/335 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+LH V+ A +L IG ++T + LLHD ++D +S + FG VA LV+
Sbjct: 44 RRSGEPYILHPVQVAGILVDIGLDATTIIGALLHDVVEDTDISLQQLTDDFGPDVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +++ A + M +AMA D R +LIKLADRLHNM TL +P
Sbjct: 104 GVTKLGKIKYKSKKEELA------ENHRKMIIAMAEDVRVILIKLADRLHNMRTLQHMPK 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K+ + A+ETLEIF PLA+R+GIST K +LE++ +++NP Q+ ++ S K EA+
Sbjct: 158 EKQVQKAEETLEIFAPLAHRMGISTIKWELEDISLRYINPQQYYKIVSMMKQKRTEREAL 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
VTS I ++ L++ +I V GR K +YSI+ KM+K K +EI+D+ +R+IV++
Sbjct: 218 VTSVITEVNGVLEEVHIDADV-NGRPKHIYSIYNKMVKHKKEFNEIYDLMAVRIIVDSIR 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H + +PG+ KDYI PK N YQSLHT V G PLEVQIRTK+MH A
Sbjct: 277 DCYAVLGIIHTQYKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTKDMHFIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
EFG AAHW YKEG ++ + + R +L Q
Sbjct: 337 EFGIAAHWAYKEGKNVSTNGFDEKIAHLREILELQ 371
>gi|256375833|ref|YP_003099493.1| (p)ppGpp synthetase I SpoT/RelA [Actinosynnema mirum DSM 43827]
gi|255920136|gb|ACU35647.1| (p)ppGpp synthetase I, SpoT/RelA [Actinosynnema mirum DSM 43827]
Length = 766
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 207/340 (60%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S D + FG VA LV+
Sbjct: 80 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSLDQLRDDFGTVVALLVD 139
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ A EA+ + M +AMA D R ++IKLADRLHNM T+ LP
Sbjct: 140 GVTKLDKVKLGA--------AAEAETIRKMVIAMAKDPRVLVIKLADRLHNMRTMRFLPP 191
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + +
Sbjct: 192 EKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIVRLVANRAPSRDTY 251
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ I +L L+ ++ V GR K YSI+ KM+ + D+IHD+ G+R+ V+
Sbjct: 252 LSGVINELSGHLEGARLTAKV-EGRPKHYYSINQKMIVRGRDFDDIHDLVGVRIQVDEVR 310
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT +MH A
Sbjct: 311 DCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTYDMHRTA 370
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE H +++ E W R +L WQ EA
Sbjct: 371 EYGIAAHWRYKETKGSHRGKSVEVDEMAWMRQLLDWQREA 410
>gi|218132940|ref|ZP_03461744.1| hypothetical protein BACPEC_00801 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991813|gb|EEC57817.1| RelA/SpoT family protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 776
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 239/406 (58%), Gaps = 34/406 (8%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H + A++LA + + + AGLLHD ++D ++ D I R FGA VA LV
Sbjct: 80 FRKSGEPYIIHPICVAIILAELELDKESIIAGLLHDVVEDTVMTTDDITREFGAEVALLV 139
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+QL+ E++ ++A+ L MFLAMA D R ++IKLADRLHNM T+
Sbjct: 140 DGVTKLTQLN---YEHDKIE--IQAENLRKMFLAMAKDIRVIMIKLADRLHNMRTMQYQS 194
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+ ++ET+EI+ P+A+RLGIS KV+L++L ++L PD + +L ++ + EA
Sbjct: 195 PAKQIEKSRETMEIYAPIAHRLGISKIKVELDDLSMQYLMPDVYNDLVKQINMNKENREA 254
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ S I++++ +++ I + GR K +SI+ KM+ + T+D+I+D++ +R+ VE
Sbjct: 255 FIKSIIKEVKMHIENAGIEAEI-DGRVKHFFSIYRKMVNQNKTLDQIYDLFAVRIKVETV 313
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P E+QIRT EMH
Sbjct: 314 KDCYAALGVIHEMYKPIPGRFKDYIAMPKENMYQSLHTTLIASNGRPFEIQIRTYEMHRT 373
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCT 355
AE+G AAHW+YKEG + + + W R +L WQ + MS ++ + SIK
Sbjct: 374 AEYGIAAHWKYKEGKTGETGNQNEEAKLSWLRQILEWQRD-MSDNKEFLS---SIKNDLN 429
Query: 356 FPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
S D + + P V+ PT ST +D
Sbjct: 430 LFS---DSVYCFTPTG----------------DVKNLPTGSTPIDF 456
>gi|373494894|ref|ZP_09585491.1| hypothetical protein HMPREF0380_01129 [Eubacterium infirmum F0142]
gi|371967256|gb|EHO84728.1| hypothetical protein HMPREF0380_01129 [Eubacterium infirmum F0142]
Length = 733
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 211/340 (62%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY +H + A++LA +G + + GLLHD ++D + + + FG VA LV
Sbjct: 38 LRKSGEPYFIHPIAVAIILAQLGMDEATIVGGLLHDVVEDTEYTREMLVNDFGEEVAVLV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL + +E +A+ L MF AM+ D R ++IKLADRLHNM T +
Sbjct: 98 DGVTKLGSIKFDTKEE------AQAENLRKMFFAMSKDIRVLIIKLADRLHNMRTAEYWS 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++ ++ETL+I+ PLA+RLGI T K +LE+ K+L+P ++ L ++ E + E
Sbjct: 152 ESKQKEKSRETLDIYAPLASRLGIFTVKFELEDTALKYLHPQEYETLKREVSEKREQREK 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ S IE++ L+ N+ F + GR K LYSI+ KM+ + +DEI D+ +R+IV++
Sbjct: 212 VINSVIERISTNLEQLNLHFDI-SGRSKHLYSIYKKMVLQNKQLDEIFDLTAVRVIVDSV 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH +W +P + KDYI PK N YQSLHT V G+ P E+QIRT EMH
Sbjct: 271 KDCYAVLGLVHTMWKPIPRRFKDYIAMPKPNMYQSLHTTVIGDNGEPFEIQIRTFEMHKV 330
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG D + ++ L++ W R L WQ E
Sbjct: 331 AEYGIAAHWKYKEGKSDSKQNNEDLKLA-WLRQTLEWQQE 369
>gi|282881989|ref|ZP_06290630.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
gi|281298019|gb|EFA90474.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
Length = 711
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 210/339 (61%), Gaps = 19/339 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + AM+LA + +S + AGLLHDT++D ++Y+ I + FG +A+LV+
Sbjct: 38 RNSGEDYIIHPLHVAMILADMNMDSATIIAGLLHDTIEDTSVTYEDIEKKFGKEIAELVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L N + +A+ + M LAMA D R +++KLADRLHNM TL+ +
Sbjct: 98 GVTKLKKL------NYKSKAEKQAENIRKMVLAMAKDIRVIIVKLADRLHNMRTLEYMTE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K+ A ETLEI+ P+A+RLG+S K +LE+L ++L+PD++ KLV+ +
Sbjct: 152 AKKIEKATETLEIYAPIADRLGMSRVKWELEDLSLRYLDPDEY----YKLVDMVNKRRKE 207
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E ++ S I+ L+ L+ I + GR K+ YSI+ KM K DEI+D+ +R++
Sbjct: 208 REELINSIIDTLKVNLERVGIK-CEINGRPKNFYSIYKKMKVKGKVFDEIYDLSAVRILT 266
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY AL VVH LW +PG+ KDYI PK N YQSLHT V EVQIRT +M
Sbjct: 267 NDIKDCYGALGVVHTLWKPIPGRFKDYIAMPKPNNYQSLHTTVIDNNGETFEVQIRTYQM 326
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
H AE+G AAHW+YK G + +SF + W R ++ WQ
Sbjct: 327 HQTAEYGIAAHWKYKTGQTKTTSFDENLT-WLRQLMEWQ 364
>gi|404371563|ref|ZP_10976867.1| RelA/SpoT family protein [Clostridium sp. 7_2_43FAA]
gi|226912310|gb|EEH97511.1| RelA/SpoT family protein [Clostridium sp. 7_2_43FAA]
Length = 730
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 213/341 (62%), Gaps = 14/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H ++ A +LA +G +++ + AGLLHD ++D +YD I F VADLV+
Sbjct: 37 RESGEPYITHPIDVAEILAEMGMDTSTIVAGLLHDVIEDTHYTYDDIKNIFNEEVADLVQ 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAMA D R ++IKLADRLHN+ TL +P
Sbjct: 97 GVTKLGKIEYKTKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNLRTLKFMPK 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ AKETL+I+ PLA+RLGIS K +LE+L F++L+ +++ +L ++ E E
Sbjct: 151 EKQKQKAKETLDIYAPLAHRLGISKIKWELEDLAFRYLHEEEYYDLVKQIAEKRVERETY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IE L L++ I + GR K YSI+ KM+ K ++++I D+ +R++V +
Sbjct: 211 IAEIIEDLHNKLEESEIDSDI-DGRPKHFYSIYKKMINKNKSIEQIFDLTAIRILVNTVK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EMH A
Sbjct: 270 DCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGPQGKTFEIQIRTFEMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHS---SFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEGD Q SF ++ W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEGDTQEDKEKSFENKLA-WLRDMLEWQKET 369
>gi|334119644|ref|ZP_08493729.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
gi|333457806|gb|EGK86427.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
Length = 758
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 148/346 (42%), Positives = 212/346 (61%), Gaps = 14/346 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +L +G N+ ++AAG LHD ++D ++ + I + FGA V LVE
Sbjct: 63 RKSGEPYICHPVAVAGILRYMGGNNVMIAAGFLHDIVEDTDITLEEIEQRFGAEVRQLVE 122
Query: 62 GVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 123 GVTKLSKF-------NFSSKTERLAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLS 175
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++ A ET +IF PLANRLGI +K +LE+L FK+L P+ + E+ + E E
Sbjct: 176 EEKQRSIALETRDIFAPLANRLGIGRFKWELEDLAFKYLEPEAYREIQELVAEKRADRET 235
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + L + L + I + GR K LY I+ KM +++ ++++DI +R+IVE+
Sbjct: 236 QLAEVTDCLRERLDNLGIKCYEVSGRPKHLYGIYGKMQRRQKGFNQVYDIAAVRIIVESN 295
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY+AL +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT MH
Sbjct: 296 DDCYRALAIVHDSFRPIPGRFKDYIGLPKANRYQSLHTGVIGTSGRPIEVQIRTVAMHHI 355
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE +++ + W R +L WQ + + DR
Sbjct: 356 AEYGIAAHWKYKETGGSNTTVTGDDEKFTWLRQLLEWQSD-LKDDR 400
>gi|299144024|ref|ZP_07037104.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518509|gb|EFI42248.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 713
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 211/339 (62%), Gaps = 19/339 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H A++LA + ++ + AGLLHDT++D ++Y+ I + FG +ADLVE
Sbjct: 37 RNSGEPYIVHPFNVALILADMNMDTATIIAGLLHDTIEDTDVTYEDIKKEFGVEIADLVE 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L N + +A+ + M LAMA D R +++KLADRLHNM TL+ +
Sbjct: 97 GVTKLKKL------NYQTKQEKQAENIRKMVLAMARDIRVIIVKLADRLHNMRTLEYMTD 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K+ A ETLEI+ P+A+RLG+S K +LE+L ++L+P+ + +L VE +
Sbjct: 151 AKKHEKALETLEIYAPIADRLGMSKIKWELEDLSLRYLDPENYYQL----VEMVNKRRHE 206
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
EA+++ ++E+ L I + GR K+ YSI+ KM K DEI+D+ +R++V
Sbjct: 207 REALISKITLEIEKNLNKIGIHADI-HGRPKNFYSIYKKMKIKGKAFDEIYDLSAVRVLV 265
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
++ +DCY L VVH LW +PG+ KDYI PK N YQSLHT V EVQIRT EM
Sbjct: 266 DDIKDCYGVLGVVHTLWKPIPGRFKDYIAMPKPNKYQSLHTTVIDNNGETFEVQIRTFEM 325
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
H AE+G AAHW+YK G + +SF + + W R +L WQ
Sbjct: 326 HQTAEYGIAAHWKYKAGVSKSTSFD-ENLTWLRQLLEWQ 363
>gi|33866854|ref|NP_898413.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. WH 8102]
gi|33639455|emb|CAE08839.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. WH 8102]
Length = 776
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 164/346 (47%), Positives = 210/346 (60%), Gaps = 15/346 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASGDP ++H V A LL IGA+++V+AAG LHD ++D ++ D I FG+ V +LV
Sbjct: 84 FRASGDPCIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPDQIELHFGSEVRELV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + NN +A+ L MFLAMA D R VL+KLADRLHNM TL AL
Sbjct: 144 EGVTKLGGIHF----NNRTE--AQAENLRRMFLAMASDIRVVLVKLADRLHNMRTLGALK 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ----HTELSSKLVECFD 175
KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E++SK E +
Sbjct: 198 EEKRQRIARETKEIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQQEVASKRSEREE 257
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
VT A+ L L + + GR K L+ I KM +++ EI+D+ LR+I
Sbjct: 258 RLGVTVAL--LNDRLAQAGLEGCEVSGRPKHLFGIWSKMQRQQKAFHEIYDVAALRIITP 315
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 316 SVEACYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTIEMH 374
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQCEAMSKD 340
AEFG AAHW+YKEG SS W R ++ WQ E + D
Sbjct: 375 RVAEFGIAAHWKYKEGGSPASSSSEAERFNWLRQLVDWQQEGGNDD 420
>gi|386714927|ref|YP_006181250.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
gi|384074483|emb|CCG45976.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
Length = 734
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 207/341 (60%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + +A G LHD ++D +S + I + F V+ LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVNLEMDPETIAGGFLHDVVEDTEVSIEEIEKAFNTEVSMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSKEAQ------QAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA-- 177
K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + + +E
Sbjct: 157 AEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQYYRIVHLMKQKRNEREH 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ LKD NI L GR K LYSI+ KM+ + +EI+D+ +R+ V +
Sbjct: 217 YIEEVIDEIRSQLKDVNID-ADLNGRPKHLYSIYRKMVLQNKQFNEIYDLLAVRITVNSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH
Sbjct: 276 KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIGPKGDPLEVQIRTHDMHEI 335
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG SF ++ W R +L WQ E
Sbjct: 336 AEYGIAAHWAYKEGRQSTAEQSFEEKLT-WFREILEWQSET 375
>gi|17229041|ref|NP_485589.1| (p)ppGpp 3-pyrophosphohydrolase [Nostoc sp. PCC 7120]
gi|17135369|dbj|BAB77915.1| (p)ppGpp 3-pyrophosphohydrolase [Nostoc sp. PCC 7120]
Length = 751
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/339 (44%), Positives = 205/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H + A LL +G + ++AAG LHD ++D ++ + I FG V LVE
Sbjct: 60 RKSGELYISHPIAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVTIEEIEERFGPEVKQLVE 119
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ N T+ K +A+ MFLAMA D R +++KLADRLHNM TL +
Sbjct: 120 GVTKLSKI------NFTSKKESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMSE 173
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
R+R A+ET +IF PLANRLGI K +LE+L FK+L P+ ++ + E D E
Sbjct: 174 DSRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKNLEPEAFRQMQKYVSEKRDAREEK 233
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A L L+ + L + GR K LYSI+ KM +++ +EI+D+ LR+IVE E
Sbjct: 234 LAKATAILRDRLQQAGVRCLDISGRPKHLYSIYQKMHRQQKEFNEIYDLAALRIIVETNE 293
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 294 ECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRPLEVQIRTMEMHRIA 353
Query: 299 EFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
E+G AAHW+YKE +S + W R +L WQ +
Sbjct: 354 EYGIAAHWKYKETGGSNSLITTSDEKFTWLRQLLEWQSD 392
>gi|227484948|ref|ZP_03915264.1| GTP diphosphokinase [Anaerococcus lactolyticus ATCC 51172]
gi|227237103|gb|EEI87118.1| GTP diphosphokinase [Anaerococcus lactolyticus ATCC 51172]
Length = 726
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 210/335 (62%), Gaps = 16/335 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y +H + A L+ + + + AGL+HD L+D ++ D + FG + LV+
Sbjct: 44 RNSGEDYFIHPIAVASNLSDMKLDDETICAGLMHDVLEDTDVTRDEMKAEFGEEITFLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL + N T+ + +A+ + M +AMA D R VLIKLADRLHNM TL+ +
Sbjct: 104 GVTKLKNI------NYTSKEEKQAENIRKMVMAMANDVRVVLIKLADRLHNMRTLEYMTR 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K+ + A ET+EI+VPLA+RLGI + K +LE+LCF++ P+++ EL+ + E
Sbjct: 158 EKQLQKANETIEIYVPLAHRLGIYSLKWELEDLCFRYQEPEKYYELAEMVNVKRRERENY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+ L +AL NI+F + GR KSLYSI+ KM + K+ +EI+D+ +R++V+
Sbjct: 218 INEIIDTLTKALDSTNINFEI-SGRPKSLYSINKKMERNKIAFEEIYDLTAIRVLVDTIA 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY L VH LW +P ++KDYI +PK NGY+SLHT V G+ P EVQIRT++MH +
Sbjct: 277 ECYAVLGKVHSLWRPIPNRIKDYIGQPKPNGYRSLHTTVFGDDSKPFEVQIRTRKMHREC 336
Query: 299 EFGFAAHWRYKEGDCQHS------SFVLQMVEWAR 327
EFG AAHWRYKE S SF+ Q+VEW +
Sbjct: 337 EFGVAAHWRYKENKKTTSDFDDAMSFLRQIVEWQQ 371
>gi|440680395|ref|YP_007155190.1| (p)ppGpp synthetase I, SpoT/RelA [Anabaena cylindrica PCC 7122]
gi|428677514|gb|AFZ56280.1| (p)ppGpp synthetase I, SpoT/RelA [Anabaena cylindrica PCC 7122]
Length = 758
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 205/340 (60%), Gaps = 12/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H V A LL +G + ++AAG LHD ++D ++ + I FGA V LVE
Sbjct: 60 RKSGEAYIAHPVAVASLLRDLGGSPAMIAAGFLHDVVEDTEVTIEQIEELFGAEVRLLVE 119
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ N T+ +A+ MFLAMA D R +++KLADRLHNM TL +
Sbjct: 120 GVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMSE 173
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
R+R A+ET +IF PLANRLGI K +LE+L FK+L PD E+ + E E
Sbjct: 174 ASRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPDAFREIQQHVSEKRTAREEK 233
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + L + L+ I L + GR K LYSI+ KM +++ EI+D+ LR+IV+ E
Sbjct: 234 LLKTTDVLRERLQQAGIQCLDISGRPKHLYSIYQKMHRQQKEFHEIYDLAALRIIVQTNE 293
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH A
Sbjct: 294 ECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRPLEVQIRTVDMHHIA 353
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
E+G AAHW+YKE ++ V E W R +L WQ +
Sbjct: 354 EYGIAAHWKYKETGSSTNNQVTNSDEKFTWLRQLLEWQSD 393
>gi|322420743|ref|YP_004199966.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M18]
gi|320127130|gb|ADW14690.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M18]
Length = 716
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 211/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H +E A +LA + + V GLLHDT++D +++ + FGA VA LV+
Sbjct: 39 RLSGEPYLIHPMEVAGILADLKLDLPAVVTGLLHDTVEDTLTTHEELESLFGAEVARLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ +E + +A+ M LAMA D R +L+KLADRLHNM TL P
Sbjct: 99 GVTKIGKIHFKTKEES------QAENFRKMLLAMATDIRVILVKLADRLHNMRTLQYQPE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKETL+I+ P+ANRLGIS K +LE+L F++L P + +L+SK+ + E +
Sbjct: 153 PKQRTIAKETLDIYAPIANRLGISWVKGELEDLSFRYLEPQLYYDLASKVAKKKQERESY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V++ E +++ L++ I V GR K LYSI+ KM + + +DEI+D+ +R+ V++
Sbjct: 213 VSTVKEIIKKQLEEHGIKGDV-SGRSKHLYSIYRKMQSRNVDIDEIYDLIAIRVSVDDIR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L V+H W +PG+ KDYI PK N YQSLHT V G +EVQIRT EMH A
Sbjct: 272 ECYEVLGVIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGERMEVQIRTVEMHRVA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E G AAHW+YKEG V + W R +L WQ E
Sbjct: 332 ESGIAAHWKYKEGKGYDEKEVRRFT-WIRQLLEWQQE 367
>gi|118580813|ref|YP_902063.1| (p)ppGpp synthetase I SpoT/RelA [Pelobacter propionicus DSM 2379]
gi|118503523|gb|ABL00006.1| (p)ppGpp synthetase I, SpoT/RelA [Pelobacter propionicus DSM 2379]
Length = 717
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 229/403 (56%), Gaps = 36/403 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H +E A LLA + + V G LHDT++D + + + FG VA LV+
Sbjct: 39 RLSGEPYIIHPMEVAGLLAELRLDVASVITGFLHDTIEDTLTTAEELTSLFGDEVATLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+S++ + + +A+ M LAM+ D R +L+KLADRLHNM TL+ P
Sbjct: 99 GVTKISKIHFKTKAES------QAENFRKMLLAMSIDIRVILVKLADRLHNMRTLEFQPE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAM 178
K++ A+ET++I+ P+ANRLGIS KV+LE+L F++LNP+ + +L+ K L + EA
Sbjct: 153 LKQRSIAQETMDIYAPIANRLGISWIKVELEDLSFRYLNPEIYFDLARKISLKKREREAY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V+ A + L I V GR K LYSI+ KML + + +DEI+D+ LR++V++
Sbjct: 213 VSEAKTVIADKLGQHGIKGEV-SGRSKHLYSIYRKMLARNVELDEIYDLIALRILVDDVR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY+ L V+H W +PG+ KDYI PK N YQSLHT V G +EVQIRT EMH A
Sbjct: 272 DCYEVLGVIHSAWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGDRMEVQIRTHEMHNVA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPS 358
+ G AAHW+YKEG V + W R +L WQ E + R + DS+K FP
Sbjct: 332 DAGIAAHWKYKEGKGYDERDV-KRFSWLRQLLEWQQE-LQDSREFM---DSVKVEL-FPE 385
Query: 359 HADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
+ + PQ V+ FP ST +D
Sbjct: 386 EV----YVFTPQG----------------DVKPFPRGSTPIDF 408
>gi|376284865|ref|YP_005158075.1| GTP pyrophosphokinase [Corynebacterium diphtheriae 31A]
gi|371578380|gb|AEX42048.1| GTP pyrophosphokinase [Corynebacterium diphtheriae 31A]
Length = 759
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + FGA VA L+
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLEDLTADFGAEVARLL 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L LK+ +I V+ GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 242 YLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEIFDLVGIRVLVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|299822818|ref|ZP_07054704.1| GTP diphosphokinase [Listeria grayi DSM 20601]
gi|299816347|gb|EFI83585.1| GTP diphosphokinase [Listeria grayi DSM 20601]
Length = 740
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + + + VA+G LHD ++D ++ D + FG VA LV
Sbjct: 45 FRKSGEPYIIHPIQVAGILAELRMDPSTVASGFLHDVVEDTPVTLDDLKAEFGEEVAMLV 104
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 105 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA-- 177
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + DE
Sbjct: 159 TQKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMRQKRDERER 218
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + L++ NI + GR K +YSI+ KM ++ +EI+D+ +R+IV +
Sbjct: 219 YLQDVIDGVNDNLEELNIQADI-TGRPKHIYSIYRKMSIQQKQFNEIYDLLAVRIIVSSI 277
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 278 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTTEMHQI 337
Query: 298 AEFGFAAHWRYKEGDCQH--SSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG + +SF +M W R +L +Q EA
Sbjct: 338 AEYGVAAHWAYKEGKVVNAKTSFDNKMT-WFREILEYQNEA 377
>gi|86606590|ref|YP_475353.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
gi|86555132|gb|ABD00090.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
Length = 760
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 208/337 (61%), Gaps = 13/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H V A LL +G ++ VAAGLLHD ++D ++ + + FG V LVE
Sbjct: 68 RKSGDPYIAHPVAVASLLRELGGDAVTVAAGLLHDVVEDTEVTLEALEAEFGPEVRLLVE 127
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLSQ N +SKT +A+ MF+AMA D R +++KLADRLHNM TL LP
Sbjct: 128 GVTKLSQF-------NFSSKTEQQAENFRRMFVAMAKDIRVIVVKLADRLHNMRTLQYLP 180
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD---E 176
K+++ A ET+EIF PLANRLGI +K +LE+L FK+L+ + + ++ +LV E
Sbjct: 181 PHKQKQIAAETMEIFAPLANRLGIWHFKWELEDLAFKYLDYEAYRQIQ-ELVNAKRSERE 239
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A + + IE+L + L + + GR K LY I+ KM +++ EI+D+ +R+IV+
Sbjct: 240 AEIQAFIEELRKHLIQGGLEHFEISGRPKHLYGIYRKMQQQRKEFHEIYDLLAVRVIVQT 299
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+CY+ L VVH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT+EMH
Sbjct: 300 VSECYRVLAVVHNCFRPIPGRFKDYIGLPKANRYQSLHTAVIGLQGRPVEVQIRTEEMHR 359
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHW+YKE + W R +L WQ
Sbjct: 360 VAEYGIAAHWKYKEAGSTPVKPEEERFTWLRQLLEWQ 396
>gi|104773939|ref|YP_618919.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|103423020|emb|CAI97706.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
Length = 753
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 145/320 (45%), Positives = 197/320 (61%), Gaps = 18/320 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A +LA +G + VAAG LHDT++D ++ D I FGA VA +V+
Sbjct: 44 RASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + K A+ M +AMA D R +L+KLADRLHNM TL+ L
Sbjct: 104 GVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP E K+V D
Sbjct: 158 DKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP----EAYYKIVSMMDAKRSE 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + AI+ L L I + + GR K +YSI+ KM+ K +EI+D+ +R+IV
Sbjct: 214 REGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNKHKNFNEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+EM
Sbjct: 273 PTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTEEM 332
Query: 295 HLQAEFGFAAHWRYKEGDCQ 314
H AE+G AAHW YK G+ Q
Sbjct: 333 HKVAEYGVAAHWAYKRGNFQ 352
>gi|225376526|ref|ZP_03753747.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
16841]
gi|225211625|gb|EEG93979.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
16841]
Length = 768
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/342 (41%), Positives = 216/342 (63%), Gaps = 15/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A++LA + + + AGLLHD ++D ++ + I + FGA VA LV
Sbjct: 67 VRKSGEPYIIHPLCVAIILAELELDKETIVAGLLHDVVEDTVMTDEEIKQEFGAEVALLV 126
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL QLS A + V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 127 DGVTKLGQLSYDADKVE-----VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMT 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++ A+ET++I+ P+A RLGIS K++L++L K+L P+ + +L ++ + +
Sbjct: 182 PEKQKEKARETMDIYAPIAQRLGISKIKIELDDLSLKYLEPEAYYDLVHQIAQRKSVRDD 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V S +E++++ + + I + GR K +SI+ KM + T+D+I+D++ +R+IV++
Sbjct: 242 YVQSLVEEVKKHIHEAGIPAQI-DGRAKHFFSIYKKMKNQDKTLDQIYDLFAIRIIVDSV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 301 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPFEIQIRTYEMHRT 360
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMV------EWARWVLTWQ 333
AE+G AAHW+YKE + V W R +L WQ
Sbjct: 361 AEYGIAAHWKYKEASNNGGAAAPMTVTEEEKLSWLRQILEWQ 402
>gi|409997388|ref|YP_006751789.1| GTP pyrophosphokinase [Lactobacillus casei W56]
gi|406358400|emb|CCK22670.1| GTP pyrophosphokinase [Lactobacillus casei W56]
Length = 787
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 88 VRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNITLGDIEEVFGHDVAVIV 147
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 148 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 201
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 202 PDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTER-- 259
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AI+++E+AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 260 EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 318
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 319 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 378
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 379 HVAEYGVAAHWAYKEGQTSKVEY 401
>gi|154505866|ref|ZP_02042604.1| hypothetical protein RUMGNA_03408 [Ruminococcus gnavus ATCC 29149]
gi|336432177|ref|ZP_08612016.1| hypothetical protein HMPREF0991_01135 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153793884|gb|EDN76304.1| RelA/SpoT family protein [Ruminococcus gnavus ATCC 29149]
gi|336019336|gb|EGN49062.1| hypothetical protein HMPREF0991_01135 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 768
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 222/347 (63%), Gaps = 13/347 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + ++LA + + + AG+LHDT++D ++ + I R FG VA LV
Sbjct: 69 VRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDTVEDTEMTVEDITREFGEEVALLV 128
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL QLS + V+A+ L MFLAMA D R ++IKLADRLHNM TL+ +
Sbjct: 129 DGVTKLGQLS-----YSKDKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMV 183
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++ A+ET++I+ P+A RLGIS K +L++L K+ P+ + +L L E E
Sbjct: 184 PAKQKEKARETMDIYAPIAQRLGISKIKTELDDLSLKYYQPEVYFQLVKDLNERKTEREE 243
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V + ++ +++ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV++
Sbjct: 244 FVQQIVAEVSHHMENAHIQAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIVDSV 302
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT+EMH
Sbjct: 303 KDCYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPAGQPFEIQIRTEEMHKT 362
Query: 298 AEFGFAAHWRYKE--GDCQHS-SFVLQMVEWARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE G +++ S + + W R +L WQ + MS +R
Sbjct: 363 AEYGIAAHWKYKESGGSAKNNKSREEEKLSWLRQILEWQRD-MSDNR 408
>gi|331083062|ref|ZP_08332179.1| hypothetical protein HMPREF0992_01103 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330405064|gb|EGG84601.1| hypothetical protein HMPREF0992_01103 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 769
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/345 (41%), Positives = 212/345 (61%), Gaps = 23/345 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A++LA + + + AGLLHD ++D ++ + I F A V LV
Sbjct: 71 VRKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDVVEDTVMTSEEIREEFNAEVELLV 130
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL QL N +A K V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 131 DGVTKLGQL------NYSADKVEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYM 184
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VE 172
P K++ A+ET++I+ P+A RLGIS K++L++L K+L P+ + +L K+ +
Sbjct: 185 PPHKQKEKARETMDIYAPIAQRLGISKVKIELDDLSLKYLKPEVYYDLVEKINLKKSERQ 244
Query: 173 CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
F + +V +E+A + I GR K +SI+ KM+ + T+D+I+D++ +R+
Sbjct: 245 AFIDQIVGDVRAHIEKASINAQID-----GRIKHFFSIYKKMVNQDKTIDQIYDLFAVRI 299
Query: 233 IVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTK 292
IV+ DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT
Sbjct: 300 IVDTVRDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPSGQPFEIQIRTF 359
Query: 293 EMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 333
EMH AE+G AAHW+YKE V Q E W R +L WQ
Sbjct: 360 EMHRTAEYGIAAHWKYKEVSNNGKVSVTQSEEEKMSWLRQILEWQ 404
>gi|310658609|ref|YP_003936330.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
gi|308825387|emb|CBH21425.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
Length = 729
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/336 (41%), Positives = 214/336 (63%), Gaps = 11/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H +E A +LA + + +AAGL+HD ++D +S+ I R FG VA+LV+
Sbjct: 37 RKSGEKYIIHPLEVAKILAELELDVFTIAAGLMHDVVEDTEVSFSDIERLFGTEVAELVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ L MF+AM D R +LIKLADRLHNM TL +
Sbjct: 97 GVTKLGKIEYKSKEE------TQAENLRKMFMAMGKDIRVILIKLADRLHNMRTLKYMSE 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K + A ET+EI+ P+A+RLGIS K ++E++ ++L+P+ + +L K+ + E A
Sbjct: 151 EKAKEKATETIEIYAPIAHRLGISRVKWEMEDIALRYLDPEGYYDLIEKVSKKRREREAY 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+ L+ L++ NI + GR K YSI+ KM + + +EI+D+ +R++V++ +
Sbjct: 211 IQGVIDLLKNKLEEANIEGDI-KGRAKHFYSIYRKMKYQSKSFEEIYDLMAVRILVDSLK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +VH +W +PG+ KDYI PK N YQSLHT V G PLE+QIRTKEMH A
Sbjct: 270 DCYGVVGIVHTIWKPMPGRFKDYIAMPKPNMYQSLHTTVLGPDGEPLEIQIRTKEMHRTA 329
Query: 299 EFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQ 333
EFG AAHW+YKEG + S + + + W R ++ WQ
Sbjct: 330 EFGIAAHWKYKEGKIDPNESDMDKKLSWLRQMMEWQ 365
>gi|260589630|ref|ZP_05855543.1| GTP diphosphokinase [Blautia hansenii DSM 20583]
gi|260539870|gb|EEX20439.1| GTP diphosphokinase [Blautia hansenii DSM 20583]
Length = 769
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/345 (41%), Positives = 212/345 (61%), Gaps = 23/345 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A++LA + + + AGLLHD ++D ++ + I F A V LV
Sbjct: 71 VRKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDVVEDTVMTSEEIREEFNAEVELLV 130
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL QL N +A K V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 131 DGVTKLGQL------NYSADKVEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYM 184
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VE 172
P K++ A+ET++I+ P+A RLGIS K++L++L K+L P+ + +L K+ +
Sbjct: 185 PPHKQKEKARETMDIYAPIAQRLGISKVKIELDDLSLKYLKPEVYYDLVEKINLKKSERQ 244
Query: 173 CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
F + +V +E+A + I GR K +SI+ KM+ + T+D+I+D++ +R+
Sbjct: 245 AFIDQIVGDVRAHIEKASINAQID-----GRIKHFFSIYKKMVNQDKTIDQIYDLFAVRI 299
Query: 233 IVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTK 292
IV+ DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT
Sbjct: 300 IVDTVRDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPSGQPFEIQIRTF 359
Query: 293 EMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 333
EMH AE+G AAHW+YKE V Q E W R +L WQ
Sbjct: 360 EMHRTAEYGIAAHWKYKEVSNNGKVSVTQSEEEKMSWLRQILEWQ 404
>gi|417989775|ref|ZP_12630276.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
A2-362]
gi|417993039|ref|ZP_12633390.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
CRF28]
gi|417996397|ref|ZP_12636677.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
M36]
gi|418015214|ref|ZP_12654791.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lpc-37]
gi|410532448|gb|EKQ07156.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
CRF28]
gi|410535519|gb|EKQ10140.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
M36]
gi|410537520|gb|EKQ12094.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
A2-362]
gi|410552038|gb|EKQ26077.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lpc-37]
Length = 742
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 43 VRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNITLGDIEEVFGHDVAVIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 157 PDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTER-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AI+++E+AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 215 EAYIQEAIDEIEKALTDLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 274 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 333
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 334 HVAEYGVAAHWAYKEGQTSKVEY 356
>gi|238854672|ref|ZP_04645002.1| GTP pyrophosphokinase [Lactobacillus jensenii 269-3]
gi|260664385|ref|ZP_05865237.1| ppGpp synthetase [Lactobacillus jensenii SJ-7A-US]
gi|238832462|gb|EEQ24769.1| GTP pyrophosphokinase [Lactobacillus jensenii 269-3]
gi|260561450|gb|EEX27422.1| ppGpp synthetase [Lactobacillus jensenii SJ-7A-US]
Length = 745
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 200/318 (62%), Gaps = 14/318 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A +A +G + VAAG LHDT++D ++ D I R FG VA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTVANLGLDPDTVAAGFLHDTVEDTPVTNDDIKREFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + E A+ M +AMA D R +++KLADRLHNM TLD L
Sbjct: 104 GVTKLNKYEYKSHEE------FLAENHRKMLIAMAQDLRVIMVKLADRLHNMHTLDHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH----TELSSKLVECFDE 176
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP+ + +++SK E E
Sbjct: 158 DKQRRIASETLDIYAPLADRLGIGTIKWELEDMSLHYLNPEAYYNIVNQMNSKRSER--E 215
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ +AI L+ L +I + + GR K +YSI+ KM+ K EI D+ +R+IV+N
Sbjct: 216 GYIDTAITYLKDTLDGLHIKYDIY-GRPKHIYSIYKKMVNKHKDFSEIFDLLAVRVIVQN 274
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++MH
Sbjct: 275 VRDCYAVLGAVHTKWKPMPGRFKDYIAVPKANGYQSLHTTIIGPGGKPLEIQIRTQQMHE 334
Query: 297 QAEFGFAAHWRYKEGDCQ 314
AE+G AAHW YK+GD Q
Sbjct: 335 VAEYGVAAHWAYKKGDTQ 352
>gi|298529911|ref|ZP_07017313.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509285|gb|EFI33189.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
Length = 720
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 214/339 (63%), Gaps = 11/339 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H +E + +LA + ++ +AAGLLHDT++D S + + FG VA +V
Sbjct: 38 IRLSGEPYLSHPLEVSDMLADLHLDADTIAAGLLHDTVEDTKASLEEVRDQFGEEVARIV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALP 119
+GV+K+ ++S ++E +A+ + M LAMAD R +L+KLADRLHNM TL+
Sbjct: 98 KGVTKIGKMSFDSKEE------AQAENIRKMILAMADDIRVILVKLADRLHNMKTLEHQS 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
K++ A+ET++I+ PLANRLG+ K+QLE+L +++ PD + ++ + + E
Sbjct: 152 SFKQKAVAQETMDIYAPLANRLGLYRLKIQLEDLSLRYMKPDVYFQIQEGVNKQKVVGEQ 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +E+ L+ +I V GR K +YSI+ KM+++ L++D++ DI R++V++
Sbjct: 212 YIQKVCQNIEEILEQNSIEGRV-SGRMKHIYSIYHKMVQQGLSLDQVFDIIAFRVLVQSI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +VH +W VPG+ KDYI+ PK N YQSLHT V G +E+QIRT+EMH
Sbjct: 271 KDCYAVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVIGPDGERIEIQIRTEEMHKM 330
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQCE 335
AEFG A+HWRYKE G + + W R +L WQ E
Sbjct: 331 AEFGVASHWRYKEDGKNRFKDKDAERFSWLRQILDWQEE 369
>gi|227534968|ref|ZP_03965017.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239631387|ref|ZP_04674418.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066581|ref|YP_003788604.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei str. Zhang]
gi|417980818|ref|ZP_12621497.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
12A]
gi|417986894|ref|ZP_12627458.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
32G]
gi|417999269|ref|ZP_12639480.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
T71499]
gi|418002217|ref|ZP_12642339.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UCD174]
gi|418008131|ref|ZP_12648000.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW4]
gi|418010975|ref|ZP_12650746.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lc-10]
gi|227187425|gb|EEI67492.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239525852|gb|EEQ64853.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438988|gb|ADK18754.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei str. Zhang]
gi|410524265|gb|EKP99178.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
32G]
gi|410524329|gb|EKP99241.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
12A]
gi|410539545|gb|EKQ14073.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
T71499]
gi|410544645|gb|EKQ18966.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UCD174]
gi|410547359|gb|EKQ21594.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW4]
gi|410553554|gb|EKQ27557.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lc-10]
Length = 742
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 43 VRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNITLGDIEEVFGHDVAVIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 157 PDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTER-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AI+++E+AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 215 EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 274 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 333
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 334 HVAEYGVAAHWAYKEGQTSKVEY 356
>gi|363899872|ref|ZP_09326379.1| hypothetical protein HMPREF9625_01039 [Oribacterium sp. ACB1]
gi|395210307|ref|ZP_10399227.1| putative GTP diphosphokinase [Oribacterium sp. ACB8]
gi|361957535|gb|EHL10843.1| hypothetical protein HMPREF9625_01039 [Oribacterium sp. ACB1]
gi|394704597|gb|EJF12135.1| putative GTP diphosphokinase [Oribacterium sp. ACB8]
Length = 755
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 216/338 (63%), Gaps = 12/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D ++ + F VA LV+
Sbjct: 59 RKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTGMTLKDLEAEFNPDVASLVD 118
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QL+ N+ ++A+ L MF++MA D R ++IKLADRLHN+ TL+
Sbjct: 119 GVTKLTQLNL-----NSDKVEMQAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSP 173
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
KR+ A+E+LEI+ PLA+RLGIS K+++++L K+L P+ + +L+ K+ E
Sbjct: 174 EKRKEKARESLEIYSPLADRLGISKIKIEMDDLSLKYLEPEVYYDLADKVHFKREAREDR 233
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ S +E++ + +++ I + GR K +SI+ KM+ + T+D+I+D++ +R+IVE
Sbjct: 234 INSIVEEVREHIEESGIEANI-KGRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIVETVR 292
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L V+H+++ +PG+ KDYI PK N YQSLHT V G VP E+QIRT EMH A
Sbjct: 293 DCYAVLGVIHKMYTPIPGRFKDYIAMPKPNMYQSLHTTVIGRDGVPFEIQIRTYEMHRTA 352
Query: 299 EFGFAAHWRYKE-GDCQHSSFVLQM--VEWARWVLTWQ 333
EFG AAHW+YKE G + +M ++W +L WQ
Sbjct: 353 EFGIAAHWKYKEQGGSNEKATETEMSKMKWLHEILEWQ 390
>gi|191638527|ref|YP_001987693.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
gi|385820236|ref|YP_005856623.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
gi|385823433|ref|YP_005859775.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
gi|418005247|ref|ZP_12645243.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW1]
gi|190712829|emb|CAQ66835.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
gi|327382563|gb|AEA54039.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
gi|327385760|gb|AEA57234.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
gi|410547500|gb|EKQ21733.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW1]
Length = 742
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 43 VRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNITLGDIEEVFGHDVAVIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 157 PDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTER-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AI+++E+AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 215 EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 274 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 333
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 334 HVAEYGVAAHWAYKEGQTSKVEY 356
>gi|296132724|ref|YP_003639971.1| (p)ppGpp synthetase I SpoT/RelA [Thermincola potens JR]
gi|296031302|gb|ADG82070.1| (p)ppGpp synthetase I, SpoT/RelA [Thermincola potens JR]
Length = 722
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 152/341 (44%), Positives = 206/341 (60%), Gaps = 18/341 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +LA + + +AAGLLHD ++D + I FG +A LV+
Sbjct: 38 RISGEPYIIHPLSVAHILADLELDVVTIAAGLLHDVVEDTDSPLETIEEKFGVEIALLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++S N + VE L MFLAMA D R +LIKLADRLHNM TL L
Sbjct: 98 GVTKLSRISY----KNKMEQQVE--NLRKMFLAMAKDIRVILIKLADRLHNMRTLKHLAE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE---- 176
K++ ++ETLEIF PLA+RLGI K +LE+L ++L P ++ EL + + E
Sbjct: 152 PKQKEISEETLEIFAPLAHRLGIFKIKWELEDLALRYLEPKKYYELVDGIAQKRAEREEY 211
Query: 177 -AMVTSAI-EKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
A VT + EKLE +I GR K YSI+ KML+++ + EI+D+ +R+IV
Sbjct: 212 IARVTQILAEKLENVGIKADIQ-----GRPKHFYSIYKKMLEQQKELAEIYDLLAVRVIV 266
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY AL ++H LW +PG+ KDYI PK N YQSLHT V G P E+QIRT EM
Sbjct: 267 DTVKDCYGALGIIHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPNGEPFEIQIRTWEM 326
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
H AE+G AAHWRYKEG + + W R +L WQ +
Sbjct: 327 HRTAEYGIAAHWRYKEGGGRGDEEFENKLAWLRQLLEWQND 367
>gi|418036575|ref|ZP_12674991.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
gi|354687625|gb|EHE87705.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
Length = 753
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/320 (45%), Positives = 197/320 (61%), Gaps = 18/320 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A +LA +G + VAAG LHDT++D ++ D I FGA VA +V+
Sbjct: 44 RASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + K A+ M +AMA D R +L+KLADRLHNM TL+ L
Sbjct: 104 GVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP E K+V D
Sbjct: 158 DKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP----EAYYKIVSMMDAKRSE 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + AI+ L L I + + GR K +YSI+ KM+ K +EI+D+ +R+IV
Sbjct: 214 REGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNKHKNFNEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+EM
Sbjct: 273 PTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTEEM 332
Query: 295 HLQAEFGFAAHWRYKEGDCQ 314
H AE+G AAHW YK G+ Q
Sbjct: 333 HKVAEYGVAAHWAYKRGNFQ 352
>gi|347753065|ref|YP_004860630.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 36D1]
gi|347585583|gb|AEP01850.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 36D1]
Length = 729
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 213/339 (62%), Gaps = 13/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + + VAAG LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHDVVEDTDVTLDELREEFNDEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISAIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + IE++++ L D +I + GR K +YSI+ KM+++ +EI+D+ +R+IV++ +
Sbjct: 218 LQNVIEEVKERLADIHIKSEI-SGRPKHIYSIYRKMVQQHKQFNEIYDLLAVRIIVKSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L V+H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGVIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTFEMHRIA 336
Query: 299 EFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW YKEG + +SF ++ W R +L +Q +
Sbjct: 337 EYGVAAHWAYKEGKTVNEKTSFEKKL-SWFREILEFQND 374
>gi|331090638|ref|ZP_08339489.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401078|gb|EGG80673.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 766
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 144/355 (40%), Positives = 219/355 (61%), Gaps = 14/355 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H ++LA + + +AAG+LHD ++D ++ + I FG+ VA LV
Sbjct: 69 VRKSGEAYIIHPTWVGLILADLELDKETIAAGILHDVVEDTVMTEEEITEEFGSEVALLV 128
Query: 61 EGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL QLS +A K V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 129 DGVTKLGQLS------YSADKLEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQFM 182
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDE 176
K++ A+ET++I+ P+A RLGIS K +L++L K+ PD +L +++ + E
Sbjct: 183 RPEKQKEKARETMDIYAPIAQRLGISKIKTELDDLALKYSQPDVFYDLVNQINARKTERE 242
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
V +E++ +K+ NI V GR K +SI+ KM+ + T+D+I+D++ +R+IV++
Sbjct: 243 EFVQQIVEEVSTHMKNANIKAEVY-GRVKHFFSIYKKMVNQDKTVDQIYDLFAIRIIVDS 301
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL +H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 302 VKDCYAALGAIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPAGQPFEIQIRTVEMHK 361
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDRSCVGNGD 348
AE+G AAHW+YKE S + E W R +L WQ + +++ + GD
Sbjct: 362 TAEYGIAAHWKYKESGGSEKSVATRAEEKLSWLRQILEWQQDTDNREFLSLLKGD 416
>gi|291561450|emb|CBL40249.1| (p)ppGpp synthetase, RelA/SpoT family [butyrate-producing bacterium
SS3/4]
Length = 761
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 219/338 (64%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D + + + FG VA LV+
Sbjct: 61 RKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTVYTEEQLAELFGKEVALLVD 120
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL+QLS +A K ++A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 121 GVTKLTQLSW------SADKVEMQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMR 174
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++ A+ET+EI+ PLA+RLGIS K++L++L ++L P+ + EL K+ + +
Sbjct: 175 PEKQKEKARETIEIYSPLADRLGISKIKIELDDLALRYLEPNVYKELEEKIALTSEARQK 234
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +++ +++ I V GR K +SI+ KML + T+D+I+DI+ +R+IV++
Sbjct: 235 FIDDIISEIKTHMENAEIRCEV-NGRVKHFFSIYKKMLNQHKTLDQIYDIFAVRIIVDSV 293
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 294 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGTNGQPFEIQIRTFEMHRT 353
Query: 298 AEFGFAAHWRYKE-GDCQHSSF-VLQMVEWARWVLTWQ 333
AE+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 354 AEYGIAAHWKYKESGSGQVAAGDEAKKLSWLRQILEWQ 391
>gi|258645309|ref|ZP_05732778.1| GTP diphosphokinase [Dialister invisus DSM 15470]
gi|260402658|gb|EEW96205.1| GTP diphosphokinase [Dialister invisus DSM 15470]
Length = 792
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 208/343 (60%), Gaps = 10/343 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RA+G+PY++H + A +LA + ++ + A LLHD ++D + + I R FG VA +V
Sbjct: 103 IRATGEPYIIHPLAVAYILAELEIDAQGIIAALLHDVVEDTAYTLEDIRRIFGDEVAFIV 162
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+G++KLSQ +E+ + + MFLAMA D R V+IKLADRLHNM TL
Sbjct: 163 DGITKLSQFHYKDKEDQ------QTENFRKMFLAMAQDIRVVVIKLADRLHNMRTLGIFR 216
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+ R AKET+EI+ PLA+RLGI K +LE+LCF +L+ +++ +L ++ + E
Sbjct: 217 REKQIRIAKETMEIYAPLAHRLGIYNIKWELEDLCFHYLHTEEYYDLVRQMRQKRKAREE 276
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V +E L Q++ D I + GR K YSI+ KM + + +I+D+Y +R+IV
Sbjct: 277 IVNDTMEVLHQSINDAGIK-ATITGRPKHFYSIYKKMKRDNKDLSQIYDLYAVRVIVNTI 335
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY L + H LW +P + KDYI PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 336 PQCYAVLGIAHSLWKPLPNRFKDYIAVPKPNMYQSLHTTVIGTKGQPVEIQIRTWEMHHI 395
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
+E+G AAHWRYKEG+ + Q + W R +L WQ + SK+
Sbjct: 396 SEYGVAAHWRYKEGNKAGTKDFDQKISWLRRLLEWQDTSNSKE 438
>gi|379709769|ref|YP_005264974.1| GTP pyrophosphokinase [Nocardia cyriacigeorgica GUH-2]
gi|374847268|emb|CCF64338.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((p)ppGpp synthetase) [Nocardia
cyriacigeorgica GUH-2]
Length = 803
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 211/341 (61%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FGA VA LV
Sbjct: 115 FRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLEQLTADFGAEVAHLV 174
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 175 DGVTKLDKVNLGA--------AAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 226
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + AKETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 227 PEKQAKKAKETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYDEIVRLVADRAPSRDT 286
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L I+ +V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 287 YLAKVRAEIVNTLAASRINAIV-EGRPKHYWSIYQKMIVKGKDFDDIHDLVGIRILCDEV 345
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 346 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPDGKPLEVQIRTQDMHRT 405
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
AEFG AAHWRYKE +HSS ++ + W R +L WQ EA
Sbjct: 406 AEFGIAAHWRYKETRGKHSSDTAEVDDMAWMRQLLDWQREA 446
>gi|197303672|ref|ZP_03168709.1| hypothetical protein RUMLAC_02399 [Ruminococcus lactaris ATCC
29176]
gi|197297192|gb|EDY31755.1| RelA/SpoT family protein [Ruminococcus lactaris ATCC 29176]
Length = 774
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 219/347 (63%), Gaps = 13/347 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D I R FG VA LV
Sbjct: 75 VRKSGEPYIIHPLWVGIILAELEMDKETIVAGMLHDVVEDTEMTLDDITREFGEEVALLV 134
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL QLS + V+A+ L MFLAMA D R ++IKLADRLHNM TL+ +
Sbjct: 135 DGVTKLGQLSY-----SQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMT 189
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
K++ A+ET++I+ P+A RLGIS K +L++L K+ P+ + +L L + E
Sbjct: 190 EAKQKEKARETMDIYAPIAQRLGISKIKTELDDLSLKYYQPEVYYQLVKDLNARKTEREE 249
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V + ++ + +++ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV++
Sbjct: 250 FVQQIVAEVSKHMENASIKAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIVDSV 308
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT+EMH
Sbjct: 309 KDCYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPAGQPFEIQIRTEEMHKT 368
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE ++ + E W R +L WQ + MS +R
Sbjct: 369 AEYGIAAHWKYKETGGSNAKGLNSQEEKLNWLRQILEWQRD-MSDNR 414
>gi|385815572|ref|YP_005851963.1| ppGpp synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|325125609|gb|ADY84939.1| ppGpp synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
Length = 738
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/320 (45%), Positives = 197/320 (61%), Gaps = 18/320 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H ++ A LA +G + VAAG LHDT++D ++ D I FGA VA +V+
Sbjct: 29 RASGQPYIVHPIQVAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVD 88
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + K A+ M +AMA D R +L+KLADRLHNM TL+ L
Sbjct: 89 GVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRP 142
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP E K+V D
Sbjct: 143 DKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP----EAYYKIVSMMDAKRSE 198
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + AI+ L L I + + GR K +YSI+ KM+ K +EI+D+ +R+IV
Sbjct: 199 REGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNKHKNFNEIYDLLAVRVIV 257
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+EM
Sbjct: 258 PTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTEEM 317
Query: 295 HLQAEFGFAAHWRYKEGDCQ 314
H AE+G AAHW YK G+ Q
Sbjct: 318 HKVAEYGVAAHWAYKRGNFQ 337
>gi|421074132|ref|ZP_15535173.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
gi|392527799|gb|EIW50884.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
Length = 736
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 244/452 (53%), Gaps = 45/452 (9%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+ Y+ H + A +LA + ++ ++A LLHD ++D S + + + FG VA LV+
Sbjct: 44 RASGEEYICHPLGVAKILAELQIDALTISASLLHDVVEDTAFSLEELEKLFGKEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ ++E + + MFLAMA D R VLIKLADRLHNM TL +P
Sbjct: 104 GVTKLSRIEYKSKEEQ------QLENFRKMFLAMAKDIRVVLIKLADRLHNMRTLKHMPE 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++R ++ET EIF PLA+RLGIS+ K +LE+L F++L P+++ EL K+ + E +
Sbjct: 158 HKQRRISQETHEIFAPLAHRLGISSVKWELEDLAFRYLEPEKYYELVEKVKQKRREREQL 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AI+ L L D I + GR K YSI+ KMLK + EI+D+ +R++V+ +
Sbjct: 218 INEAIKILSTRLDDVEIKADI-QGRPKHFYSIYKKMLKGNKDLSEIYDLSAVRILVDTVK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VVH LW +P + KDYI PK N YQSLHT V PLE+QIRT +MH +
Sbjct: 277 DCYGALGVVHTLWKPLPLRFKDYIAMPKSNMYQSLHTTVISTEGQPLEIQIRTMDMHRTS 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPS 358
E+G AAHWRYKEG + + + W R + WQ + ++ P F
Sbjct: 337 EYGIAAHWRYKEGSKGANKDFDEKLTWLRQLSEWQQD--------------LRDPHEFME 382
Query: 359 HADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFP 418
FS VFV + D V + P ST +D R G
Sbjct: 383 TVKMDIFS--------DEVFVFTPKGD---VIDLPAGSTPIDFAYRIHTGVGNRC----- 426
Query: 419 LKEELRPRLNHKAVGDPRCKLKMGDVVELTPA 450
+ R+N K + KL GD+VE+ +
Sbjct: 427 ----VGARINGKMI-PLETKLTNGDIVEIVTS 453
>gi|383753776|ref|YP_005432679.1| putative GTP diphosphokinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365828|dbj|BAL82656.1| putative GTP diphosphokinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 739
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 212/340 (62%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H + A +L + + ++A LLHD ++D + + I FG VA +V
Sbjct: 45 VRVSGEEYIIHPLHVAEILTELHIDDVTISAALLHDVVEDTLYTKEQIEEMFGEEVAMIV 104
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E V+ + MFLAMA D R +++KLADRLHNM TL +
Sbjct: 105 DGVTKLGRIKYKSKEE------VQLENYRKMFLAMAKDIRVIMVKLADRLHNMRTLKYMR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R AKET+EI+ PLANRLGIS K +LE+LC ++L P+++ +L + + E A
Sbjct: 159 EDKQKRIAKETIEIYAPLANRLGISNIKWELEDLCLRYLEPEKYYDLVENVKQKRKERQA 218
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +AIE++E + + I + GR K YSI+ KML+ K + EI+D+ +R++VE+
Sbjct: 219 FIDTAIEQIETKIGEAGIKAEI-KGRAKHFYSIYKKMLRDKKDISEIYDLSAIRVLVESV 277
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G PLE+QIRT MH
Sbjct: 278 RDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRGY-PLEIQIRTFHMHEV 336
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVL-QMVEWARWVLTWQCE 335
+EFG AAHW+YKE G + + Q + W R +++ Q E
Sbjct: 337 SEFGVAAHWKYKENGKGSTAGGAMDQKMNWLRQMVSLQQE 376
>gi|116495022|ref|YP_806756.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei ATCC 334]
gi|116105172|gb|ABJ70314.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei ATCC 334]
Length = 742
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 43 VRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNITLGDIEEVFGHDVAVIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 157 PDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTER-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AI+++E+AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 215 EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 274 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 333
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 334 HVAEYGVAAHWAYKEGQTSKVEY 356
>gi|225874445|ref|YP_002755904.1| GTP pyrophosphokinase [Acidobacterium capsulatum ATCC 51196]
gi|225792335|gb|ACO32425.1| GTP pyrophosphokinase [Acidobacterium capsulatum ATCC 51196]
Length = 747
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 214/338 (63%), Gaps = 10/338 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+P++LH +E A++LA + +ST +AAGLLHD ++D ++ I FG VA +V
Sbjct: 57 FRASGEPFVLHPLEVALVLAEMKLDSTAIAAGLLHDAVEDTPVTAADIANQFGEQVAHIV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVLIKLADRLHNMMTLDALP 119
EGV+K+ ++ RE+ +A+ + M LAM D R VLIKLADRLHNM TL+ L
Sbjct: 117 EGVTKIDKIQFANREDR------QAENVRKMLLAMVTDVRVVLIKLADRLHNMRTLEHLS 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA-M 178
++Q A+ETL+I+ PLA+RLG+ + +LE+L F++++P + +L + E E
Sbjct: 171 AERQQAIARETLDIYAPLAHRLGMGKLRGELEDLSFRYVDPYSYDQLQLAVEERRSEGEQ 230
Query: 179 VTSAIEKLE-QALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +E L + LK+ I+ V R K L+SIH K+ K + ++D+++D+ LR+I +
Sbjct: 231 FLAGVEALLLEKLKENKITARVQW-RIKRLFSIHSKLQKSRSSVDQLYDLLALRVITNSV 289
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L ++H +W VPG++KD+I P+ N YQSLHT V GEG EVQIRT+EMH
Sbjct: 290 PDCYAVLGLIHSIWRPVPGRIKDFIAMPRPNMYQSLHTTVMGEGGHQFEVQIRTEEMHRV 349
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G AAHW+YK G+ S+ Q + W R ++ WQ E
Sbjct: 350 AEEGIAAHWKYKAGNSPISARDEQRLAWVRQLVEWQRE 387
>gi|251780257|ref|ZP_04823177.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084572|gb|EES50462.1| RelA/SpoT family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 728
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 214/346 (61%), Gaps = 23/346 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA +G +++ +AAGLLHD ++D SY+ + F +A+LV
Sbjct: 37 RESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDTTCSYESMKTIFNEEIANLVN 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAMA D R ++IKLADRLHNM TL +
Sbjct: 97 GVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMTK 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE------CF 174
K++ AKETL+I+ PLA+RLG+S K +LE+L F++L+ D++ +L ++ E +
Sbjct: 151 GKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLHEDEYYQLVEQIAEKRVERETY 210
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
+V EKL+++ D +I GR K YSI+ KM+ K ++++I D+ +R++V
Sbjct: 211 INEVVCYLKEKLDESGIDSDIE-----GRPKHFYSIYKKMINKNKSIEQIFDLTAIRILV 265
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G E+QIRT EM
Sbjct: 266 NSVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGNQGKTFEIQIRTFEM 325
Query: 295 HLQAEFGFAAHWRYKEGDCQH----SSFVLQMVEWARWVLTWQCEA 336
H AE+G AAHW+YKEGD F ++V W R +L WQ E
Sbjct: 326 HKTAEYGIAAHWKYKEGDKNEEDKAKDFEKKLV-WLRDMLEWQKET 370
>gi|427731593|ref|YP_007077830.1| RelA/SpoT family (p)ppGpp synthetase [Nostoc sp. PCC 7524]
gi|427367512|gb|AFY50233.1| (p)ppGpp synthetase, RelA/SpoT family [Nostoc sp. PCC 7524]
Length = 797
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 206/340 (60%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H V A LL +G + ++AAG LHD ++D ++ + I + FG V LVE
Sbjct: 106 RKSGELYISHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVTIEEIEQHFGPEVRQLVE 165
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS++ N SKT +A+ MFLAMA D R +++KLADRLHNM TL +
Sbjct: 166 GVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMS 218
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
R+R A+ET +IF PLANRLGI K +LE+L FK+L P+ ++ + E E
Sbjct: 219 EDSRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPEAFRQIQQHVSEKRTAREE 278
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ A L++ L+ I L + GR K LYSI+ KM +++ EI+D+ LR+IV+
Sbjct: 279 KLVKATTILQERLQQAGIRCLDISGRPKHLYSIYQKMQRQQKEFHEIYDLAALRIIVQGN 338
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 339 EECYRALAIVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRPLEVQIRTMEMHRI 398
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
AE+G AAHW+YKE HS + W R +L WQ +
Sbjct: 399 AEYGIAAHWKYKETGGSHSQLTTSDEKFTWLRQLLEWQSD 438
>gi|94967206|ref|YP_589254.1| (p)ppGpp synthetase SpoT/RelA [Candidatus Koribacter versatilis
Ellin345]
gi|94549256|gb|ABF39180.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Candidatus Koribacter versatilis Ellin345]
Length = 740
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 218/341 (63%), Gaps = 25/341 (7%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PYL+H +E ++LA + ++T +AAGLLHD+++D ++ + I FG VA +VE
Sbjct: 53 RASGEPYLVHPLEVGIILADMRLDTTAIAAGLLHDSVEDTSVTIEEIQEQFGEQVAHIVE 112
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPL 120
GV+K+S++ +RE +A+ + M LAM D R VLIKLADRLHNM TL L
Sbjct: 113 GVTKISRIDFASREE------AQAENVRKMVLAMVDDIRVVLIKLADRLHNMRTLQHLSQ 166
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
++++ A+ETLEI+ P+A+RLG+ + +LE+L F +++P + K VE E+
Sbjct: 167 ERQEKIARETLEIYAPIAHRLGMGRVRGELEDLAFPYVDP-----IGYKRVEEAVESRRK 221
Query: 181 SAIEKLEQA-------LKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
E LEQ LK+ +I V R K LYSI+ K++++++ +++++D+Y LR+I
Sbjct: 222 KGEEFLEQVKGVITAKLKENSIDARV-DSRIKRLYSINQKLIRQRIDVEQVYDMYALRII 280
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
++ DCY L ++H LW VPG++KD+I P+ N YQSLHT V E P EVQIRT+E
Sbjct: 281 TKSVVDCYSILGIIHNLWRPVPGRIKDFIAMPRPNFYQSLHTTVIAENGNPFEVQIRTEE 340
Query: 294 MHLQAEFGFAAHWRYKEG-----DCQHSSFVLQMVEWARWV 329
MH AE G AAHW+YK+G D Q +++ Q+VEW R V
Sbjct: 341 MHKLAEEGIAAHWKYKDGPISAKDEQRLAWLRQVVEWQRDV 381
>gi|366085882|ref|ZP_09452367.1| GTP pyrophosphokinase [Lactobacillus zeae KCTC 3804]
Length = 741
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 43 VRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNITLGDIEEVFGHDVAVIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 157 PDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTER-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AIE++++AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 215 EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 274 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 333
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 334 HVAEYGVAAHWAYKEGQTSKVQY 356
>gi|229552374|ref|ZP_04441099.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
gi|229314276|gb|EEN80249.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
Length = 769
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 71 VRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNITLGDIEEVFGHDVAVIV 130
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 131 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 184
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 185 PDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTE--R 242
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AIE++++AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 243 EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 301
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 302 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 361
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 362 HVAEYGVAAHWAYKEGQTSKVQY 384
>gi|433463434|ref|ZP_20420988.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
gi|432187529|gb|ELK44809.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
Length = 734
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 206/341 (60%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + VA G LHD ++D ++ + I F VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVNLEMDPETVAGGFLHDVVEDTDITLEEIGDAFNTEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSKEAQ------QAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA-- 177
K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + + +E
Sbjct: 157 AEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQYYRIVHLMKQKRNEREH 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +++ L D NI L GR K LYSI+ KM+ + +EI+D+ +R+ VE+
Sbjct: 217 YIEEVINEIQTQLDDVNIQ-ADLNGRPKHLYSIYRKMVLQNKQFNEIYDLLAVRITVESI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH
Sbjct: 276 KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIGPKGDPLEVQIRTHDMHEI 335
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG SF ++ W R +L WQ E
Sbjct: 336 AEYGIAAHWAYKEGKQSAAEQSFEEKLT-WFREILEWQNET 375
>gi|42523075|ref|NP_968455.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
gi|39575280|emb|CAE79448.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
Length = 738
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 209/345 (60%), Gaps = 14/345 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A +LA + +A GLLHDT++D + + I R FG +A LV
Sbjct: 52 IRRSGEPYISHPLSVAAILADFHLDLDTIATGLLHDTVEDTAATLEDIRREFGDVIAHLV 111
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+K+ Q+ + N+ K + + + M +AM D R VL+KLADRLHNM TL+ +P
Sbjct: 112 DGVTKIGQM----KFKNSHEK--QGENIRKMIVAMGKDVRVVLVKLADRLHNMRTLNFMP 165
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
K++R A ETLEI+ PLA R+GIS K++LE+LCF++ PD + EL ++ + EA
Sbjct: 166 FEKQERIALETLEIYCPLAGRMGISALKIELEDLCFRYYRPDMYYELVQQIKKT--EAEQ 223
Query: 180 TSAIEKLE----QALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
IE+++ + L + V GR K L+SI+ KM + + D+++D+ R++VE
Sbjct: 224 NRYIEEVKHLIGKELTKAGFRYEVY-GRSKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVE 282
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +CY AL +VH LW +PG+ KD+I PK N YQSLHT V G G +E+QIRT EMH
Sbjct: 283 SVAECYAALGLVHSLWKPIPGRFKDFIAMPKANNYQSLHTTVMGPGGERIEIQIRTSEMH 342
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
L AE G AAHW+YKE LQ W R +++W + D
Sbjct: 343 LVAEKGIAAHWKYKERGKMMDDGDLQQANWLRDLVSWHQNVRNPD 387
>gi|423078898|ref|ZP_17067574.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
gi|357548801|gb|EHJ30660.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
Length = 760
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 62 VRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDKNITLGDIEEVFGHDVAVIV 121
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 122 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 175
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 176 PDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTER-- 233
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AIE++++AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 234 EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 292
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 293 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 352
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 353 HVAEYGVAAHWAYKEGQTSKVQY 375
>gi|331090444|ref|ZP_08339325.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336440256|ref|ZP_08619849.1| hypothetical protein HMPREF0990_02243 [Lachnospiraceae bacterium
1_1_57FAA]
gi|330401191|gb|EGG80784.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336013722|gb|EGN43596.1| hypothetical protein HMPREF0990_02243 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 767
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 218/347 (62%), Gaps = 14/347 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D + FG VA LV
Sbjct: 69 VRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLDDVAGEFGEEVALLV 128
Query: 61 EGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL QL N + K V+A+ L MFLAMA D R ++IKLADRLHNM TL+ +
Sbjct: 129 DGVTKLGQL------NYSQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFM 182
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDE 176
K+Q A+ET++I+ P+A RLGIS K +L++L K+ P+ + L L + E
Sbjct: 183 TPTKQQEKARETMDIYAPIAQRLGISKIKTELDDLSLKYWKPEVYYNLVRDLNRRKTERE 242
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV++
Sbjct: 243 EFVQQIVAEVSKHMKNAHIEAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIVDS 301
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT+EMH
Sbjct: 302 VKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPFEIQIRTEEMHK 361
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQCEAMSKDR 341
AE+G AAHW+YKEG S Q + W R +L WQ + MS +R
Sbjct: 362 TAEYGIAAHWKYKEGGDSAKSMESQEAKLNWLRQILEWQRD-MSDNR 407
>gi|169831064|ref|YP_001717046.1| (p)ppGpp synthetase I SpoT/RelA [Candidatus Desulforudis
audaxviator MP104C]
gi|169637908|gb|ACA59414.1| (p)ppGpp synthetase I, SpoT/RelA [Candidatus Desulforudis
audaxviator MP104C]
Length = 712
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/338 (44%), Positives = 211/338 (62%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ +++H +E A +LA + + V GLLHD ++DA + I FG VA LV+
Sbjct: 38 RISGEDFIVHPLEVAQILAELELDLESVVGGLLHDVIEDAGIELCVIREEFGDEVALLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L+ ++E +A+ L M LAMA D R +LIKLADRLHN+ TL +
Sbjct: 98 GVTKLRRLAYRSKEEQ------QAENLRKMLLAMAKDVRVILIKLADRLHNLRTLQYHTV 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K++ A+ETLEIF PLA+RLGI K +LE++ F+ P++H EL+ +L E
Sbjct: 152 PKQREIAQETLEIFAPLAHRLGIYRIKSELEDIAFRFREPERHEELTRRLSATRSVREGY 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+ L++ L I+ + GR K LYSI+ KML ++ ++EI DI G+R++VE+ +
Sbjct: 212 IGGVIKILQEKLGGMGITADI-QGRPKHLYSIYQKMLAQEKDLEEIFDILGIRILVESVK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQ 297
DCY L VVH LW VPG+ KDYI PK N YQSLHT V G EG V LE+Q+RT +MH
Sbjct: 271 DCYATLGVVHTLWKPVPGRFKDYIAMPKSNMYQSLHTSVVGPEGEV-LEIQVRTWDMHRT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHWRYK G +F ++ W R +L WQ E
Sbjct: 330 AEYGIAAHWRYKSGTRADPAFDEKLA-WLRQLLEWQHE 366
>gi|336114504|ref|YP_004569271.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 2-6]
gi|335367934|gb|AEH53885.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 2-6]
Length = 723
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 211/337 (62%), Gaps = 13/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + + VAAG LHD ++D ++ D + F VA LV+
Sbjct: 38 RKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHDVVEDTDVTLDELREEFNDEVAMLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 98 GVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPP 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 152 EKQRRIANETLEIFAPLAHRLGISAIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREQY 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + IE++++ L D I + GR K +YSI+ KM+++ +EI+D+ +R+IV++ +
Sbjct: 212 LQNVIEEVKERLADIRIKSEI-SGRPKHIYSIYRKMVQQHKQFNEIYDLLAVRIIVKSIK 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L V+H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 271 DCYAVLGVIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTFEMHRIA 330
Query: 299 EFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQ 333
E+G AAHW YKEG + +SF ++ W R +L +Q
Sbjct: 331 EYGVAAHWAYKEGKTVNEKTSFEKKL-SWFREILEFQ 366
>gi|404258414|ref|ZP_10961733.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia namibiensis NBRC
108229]
gi|403402928|dbj|GAC00143.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia namibiensis NBRC
108229]
Length = 784
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 204/343 (59%), Gaps = 17/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + R FG VA LV+
Sbjct: 94 RKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQALERDFGQEVAHLVD 153
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 154 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 205
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 206 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 265
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL IS V GR K +SI+ KM+ K D+IHD+ G+R++ E +
Sbjct: 266 LARVRADINNALSAARISATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGMRILCEEDR 324
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 325 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTHEMHRTA 384
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
EFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 385 EFGIAAHWRYKESGYRKSGKKSDTAEIDDMAWMRQLLDWQREA 427
>gi|317502040|ref|ZP_07960222.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
gi|316896514|gb|EFV18603.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
Length = 774
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 218/347 (62%), Gaps = 14/347 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D + FG VA LV
Sbjct: 76 VRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLDDVAGEFGEEVALLV 135
Query: 61 EGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL QL N + K V+A+ L MFLAMA D R ++IKLADRLHNM TL+ +
Sbjct: 136 DGVTKLGQL------NYSQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFM 189
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDE 176
K+Q A+ET++I+ P+A RLGIS K +L++L K+ P+ + L L + E
Sbjct: 190 TPTKQQEKARETMDIYAPIAQRLGISKIKTELDDLSLKYWKPEVYYNLVRDLNRRKTERE 249
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV++
Sbjct: 250 EFVQQIVAEVSKHMKNAHIEAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIVDS 308
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT+EMH
Sbjct: 309 VKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPFEIQIRTEEMHK 368
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQCEAMSKDR 341
AE+G AAHW+YKEG S Q + W R +L WQ + MS +R
Sbjct: 369 TAEYGIAAHWKYKEGGDSAKSMESQEAKLNWLRQILEWQRD-MSDNR 414
>gi|153816124|ref|ZP_01968792.1| hypothetical protein RUMTOR_02372 [Ruminococcus torques ATCC 27756]
gi|145846609|gb|EDK23527.1| RelA/SpoT family protein [Ruminococcus torques ATCC 27756]
Length = 438
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 219/350 (62%), Gaps = 14/350 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D + FG VA LV
Sbjct: 76 VRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLDDVAGEFGEEVALLV 135
Query: 61 EGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL QL N + K V+A+ L MFLAMA D R ++IKLADRLHNM TL+ +
Sbjct: 136 DGVTKLGQL------NYSQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFM 189
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDE 176
K+Q A+ET++I+ P+A RLGIS K +L++L K+ P+ + L L + E
Sbjct: 190 TPTKQQEKARETMDIYAPIAQRLGISKIKTELDDLSLKYWKPEVYYNLVRDLNRRKTERE 249
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV++
Sbjct: 250 EFVQQIVAEVSKHMKNAHIEAKV-YGRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIVDS 308
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT+EMH
Sbjct: 309 VKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPFEIQIRTEEMHK 368
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQCEAMSKDRSCV 344
AE+G AAHW+YKEG S Q + W R +L WQ + MS +R +
Sbjct: 369 TAEYGIAAHWKYKEGGDSAKSMESQEAKLNWLRQILEWQRD-MSDNREFL 417
>gi|25028323|ref|NP_738377.1| GTP pyrophosphokinase [Corynebacterium efficiens YS-314]
gi|259507378|ref|ZP_05750278.1| GTP diphosphokinase [Corynebacterium efficiens YS-314]
gi|23493608|dbj|BAC18577.1| GTP pyrophosphokinase [Corynebacterium efficiens YS-314]
gi|259165003|gb|EEW49557.1| GTP diphosphokinase [Corynebacterium efficiens YS-314]
Length = 761
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 212/342 (61%), Gaps = 16/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A + A IG ++T + A LLHDT++D S D + R FG VA LV
Sbjct: 70 VRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLDDLTRDFGEEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASIKWELEDLSFAILYPKKYEEIVRLVADRSPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ L D NI VL GR K +SI+ KM+ + D+I D+ G+R++V+N
Sbjct: 242 YLKEIIDQVTAGLHDNNIPAEVL-GRPKHYWSIYQKMIVRGRDFDDIFDLVGIRILVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L+ +PG+ KDYI+ P+F Y+SLHT V G G PLEVQ RT EMH
Sbjct: 301 NNCYAAIGVVHSLFNALPGRFKDYISAPRFGVYKSLHTTVMGPGGKPLEVQARTHEMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS---FVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE H+ V QM W R +L WQ EA
Sbjct: 361 AEFGIAAHWRYKETKGSHTGDREEVDQMA-WMRQLLDWQKEA 401
>gi|199599338|ref|ZP_03212736.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus rhamnosus HN001]
gi|258508564|ref|YP_003171315.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|385828226|ref|YP_005865998.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|385835394|ref|YP_005873168.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
gi|421768716|ref|ZP_16205426.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP2]
gi|421771132|ref|ZP_16207793.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP3]
gi|199589777|gb|EDY97885.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus rhamnosus HN001]
gi|257148491|emb|CAR87464.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|259649871|dbj|BAI42033.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|355394885|gb|AER64315.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
gi|411185565|gb|EKS52692.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP2]
gi|411186567|gb|EKS53691.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP3]
Length = 741
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 43 VRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNITLGDIEEVFGHDVAVIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 157 PDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTER-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AIE++++AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 215 EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 274 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 333
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 334 HVAEYGVAAHWAYKEGQTSKVQY 356
>gi|255994169|ref|ZP_05427304.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
gi|255993837|gb|EEU03926.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
Length = 733
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 204/336 (60%), Gaps = 11/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H A +LA +G + + AGLLHD ++D + + + FG+ V LVE
Sbjct: 39 RKSGEPYIIHPEAVAKILAELGMDEDTLIAGLLHDVIEDTDFTPEMVEEKFGSDVRHLVE 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL L +E V+A+ + MFLAM+ D R ++IKLADRLHN+ T++ +
Sbjct: 99 GVTKLGTLVFETKEE------VQAENMRKMFLAMSKDIRVLIIKLADRLHNLRTINYMSQ 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K + +ETL+I+ PLA+RLGI + K +LE++ K L+P+ + EL + E E
Sbjct: 153 DKIKLKCQETLDIYAPLASRLGIYSIKFELEDIALKCLHPETYEELKKNVNEKKTEREKA 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I ++E+ALK I + + GR K YSI+ KM +K ++DEI D+ +R+IV +
Sbjct: 213 IKDVISEVERALKPLGIEYTIY-GRSKHFYSIYKKMQHQKKSLDEIFDLTAIRIIVNEKS 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VVH +W +PG+ KDYI PK N YQS+HT V G P EVQIRTK+MH A
Sbjct: 272 DCYAVLGVVHNIWTPIPGRFKDYIAMPKMNMYQSIHTTVIGSIGRPFEVQIRTKKMHELA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQ 333
E+G AAHW+YKEG S + + W R L WQ
Sbjct: 332 EYGIAAHWKYKEGKSSASEEADDIKLAWLRQTLEWQ 367
>gi|238925277|ref|YP_002938794.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
gi|238876953|gb|ACR76660.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
Length = 786
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 216/352 (61%), Gaps = 14/352 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD L+D ++ D + FG VA LV+
Sbjct: 74 RKSGEPYIIHPLCVAIILAELELDKETIAAGLLHDVLEDTIMTMDEMRAEFGDDVAHLVD 133
Query: 62 GVSKLSQL-----SKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 115
GV+KL L +K ++ N ++A+ L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 134 GVTKLKHLHLTDSTKDPKDKNADRLEMQAENLRKMFLAMAKDIRVILIKLADRLHNMRTL 193
Query: 116 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVEC 173
+QR A+ET +I+ P+A RLGIS K++LE+LC K+L PD + +L K L +
Sbjct: 194 KYQSKEAQQRIARETQDIYCPIAQRLGISKIKIELEDLCMKYLYPDAYYDLVEKVALRKT 253
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
+ + + +++ + D I + GR K +SI+ KM+ + T+D+I+D++ +R++
Sbjct: 254 ERDTYIQGLVNDVKKYVSDAGIKAEIY-GRAKHFFSIYKKMVNQDKTIDQIYDLFAIRIL 312
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V+ DCY L ++H+ + +PG+ KDYI PK N YQSLHT + G P E+QIRT E
Sbjct: 313 VDTIPDCYAVLGIIHEKYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPSGQPFEIQIRTYE 372
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQM----VEWARWVLTWQCEAMSKDR 341
MH AE+G AAHW+YKE + +++ + W R +L WQ + MS ++
Sbjct: 373 MHRTAEYGIAAHWKYKETNNGNATTTTVTEEEKLSWLRQILEWQ-QDMSDNK 423
>gi|452994812|emb|CCQ93581.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium ultunense Esp]
Length = 721
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 221/339 (65%), Gaps = 13/339 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y +H AM+LA + + T + AGLLHD L+D +SY+ + + FG VA+LV
Sbjct: 36 LRNSGEIYFVHPFNVAMILADLNMDGTTIVAGLLHDVLEDTSVSYETLVKEFGEEVANLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +L ++ + +A+ L M +AMA D R ++IKLADRLHNM TL+ +
Sbjct: 96 DGVTKLKKLKYKTKQES------QAENLRKMVMAMAKDIRVIIIKLADRLHNMRTLEYMS 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++ A ETLEI+ PLA+RLGIS K +LE+L ++L+P+ + +L K+ + E A
Sbjct: 150 EEKKKEKALETLEIYAPLAHRLGISKIKWELEDLSLRYLDPEGYYDLVDKVSKRRKEREA 209
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++++ L++ NI F + GR KS YSI+ KM+ + + ++I D+ +R+IV+
Sbjct: 210 YIQRIIDEIDEKLEEMNI-FRDISGRPKSFYSIYKKMVYQNKSFEQIFDLTAIRVIVDTI 268
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHL 296
+DCY L +VH +W +PG+ KDYI PK N YQSLHT V G EG + EVQIRT +MH
Sbjct: 269 KDCYGVLGIVHTMWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPEGEI-FEVQIRTWDMHR 327
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG+ + +F ++ W R +L WQ E
Sbjct: 328 TAEYGIAAHWKYKEGNVKTDNFDEKLT-WLRQLLEWQKE 365
>gi|296270031|ref|YP_003652663.1| (p)ppGpp synthetase I [Thermobispora bispora DSM 43833]
gi|296092818|gb|ADG88770.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobispora bispora DSM 43833]
Length = 786
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 206/340 (60%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G + + A LLHDT++D S + + FG +A LV+
Sbjct: 101 RKSGDPYITHPLAVATILAELGTDDETLCAALLHDTVEDTEYSLEQLRADFGENIARLVD 160
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +A+ + M +AM+ D R ++IKLADRLHNM T+ +P
Sbjct: 161 GVTKLDKVKY--------GDAAQAETVRKMIVAMSRDIRVLVIKLADRLHNMRTMRYMPE 212
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
KR++ ++ETLEIF PLA+RLG++T K +LE+L F L P ++ E++ + E +
Sbjct: 213 EKRKQKSRETLEIFAPLAHRLGMNTIKWELEDLAFSMLYPKRYDEIARMVFERAPRRDLY 272
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IEK+ L++ I V+ GR K YSI+ KM+ K L D+I+D+ G+R++V+
Sbjct: 273 LQQVIEKVSADLREAKIKATVM-GRPKHYYSIYQKMIAKGLAFDDIYDLVGIRVLVDTVR 331
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL +H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH +A
Sbjct: 332 DCYAALGTIHARWKPVPGRFKDYIAMPKFNMYQSLHTTVIGPEGKPIELQIRTHAMHKRA 391
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHW+YKE + + W R +L WQ E+
Sbjct: 392 EYGVAAHWKYKEEMTASGGTKGKQADMAWLRQILDWQKES 431
>gi|170079402|ref|YP_001736040.1| GTP pyrophosphokinase [Synechococcus sp. PCC 7002]
gi|169887071|gb|ACB00785.1| GTP pyrophosphokinase/ RelA/SpoT family protein [Synechococcus sp.
PCC 7002]
Length = 755
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/340 (45%), Positives = 209/340 (61%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G N ++AAG LHD ++D +S + I FGA LVE
Sbjct: 62 RKSGEPYIAHPIAVAGLLLDLGGNGAMIAAGFLHDVVEDTEVSPEEIEERFGAETRKLVE 121
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL++ + +SKT +A+ MFL+MA D R +++KLADRLHNM TL+ L
Sbjct: 122 GVTKLTKFT-------FSSKTERQAENFRRMFLSMAEDIRVIVVKLADRLHNMRTLEHLR 174
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A ET EIF PLANRLGI +K +LE+LCFK+L + + + + E EA
Sbjct: 175 PDKQERIALETREIFAPLANRLGIWRFKWELEDLCFKYLEREAYRSMQKHISEKRTEREA 234
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ AIE + L+ + + GR K LYSI+ KM ++ DEI DI G+R+IVE
Sbjct: 235 KLEEAIEIIRDRLRHLGLHVWEIKGRPKHLYSIYHKMQRQHKEFDEIFDIAGIRIIVETN 294
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+AL V+H + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 295 DECYRALAVIHDAFKPIPGRFKDYIGLPKPNRYQSLHTTVVGLNGRPLEVQIRTMEMHHI 354
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
AE+G AAHW+YKE +SF + W R ++ WQ +
Sbjct: 355 AEYGIAAHWKYKEAGHSAASFTSEDEKFTWLRQLIEWQSD 394
>gi|258539745|ref|YP_003174244.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
gi|257151421|emb|CAR90393.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
Length = 741
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 43 VRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNITLGDIEEVFGHDVAVIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 157 PDKQRRIANETLEIYAPLADRLGISTIKWKLEDLSLRYLNPQQYYRIAHLMNSKRTER-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AIE++++AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 215 EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 274 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 333
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 334 HVAEYGVAAHWAYKEGQTSKVQY 356
>gi|418070749|ref|ZP_12708024.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
gi|357540169|gb|EHJ24186.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
Length = 741
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 205/323 (63%), Gaps = 14/323 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 43 VRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDKNITLGDIEEVFGHDVAVIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+++ +A ++ A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFD 175
K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+ ++ SK E
Sbjct: 157 PDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTER-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + AIE++++AL D +I + + GR K +YSI+ KM K DE++D+ +R+I E
Sbjct: 215 EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITE 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT+EMH
Sbjct: 274 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIGPMGKPLEVQIRTEEMH 333
Query: 296 LQAEFGFAAHWRYKEGDCQHSSF 318
AE+G AAHW YKEG +
Sbjct: 334 HVAEYGVAAHWAYKEGQTSKVQY 356
>gi|253699682|ref|YP_003020871.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M21]
gi|251774532|gb|ACT17113.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M21]
Length = 716
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 209/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H +E A +LA + + V GLLHDT++D +++ + FGA VA LV+
Sbjct: 39 RLSGEPYLIHPMEVAGILADLRLDLAAVVTGLLHDTVEDTLTTHEELESLFGAEVARLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ +E + +A+ M LAMA D R +L+KLADRLHNM TL P
Sbjct: 99 GVTKIGKIHFKTKEES------QAENFRKMLLAMATDIRVILVKLADRLHNMRTLQYQPE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKETL+I+ P+ANRLGIS K +LE+L F++L P + +L+ K+ + E +
Sbjct: 153 PKQRTIAKETLDIYAPIANRLGISWVKGELEDLSFRYLEPQLYYDLAGKVAKKKQERESY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + E +++ L++ I V GR K LYSI+ KM + + +DEI+D+ +R+ VE+
Sbjct: 213 VATVKEIIKKQLEEHGIKGDV-SGRSKHLYSIYRKMQSRNVDIDEIYDLIAIRVSVEDIR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L ++H W +PG+ KDYI PK N YQSLHT V G +EVQIRT EMH A
Sbjct: 272 ECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGERMEVQIRTVEMHRVA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E G AAHW+YKEG V + W R +L WQ E
Sbjct: 332 ESGIAAHWKYKEGKGYDEKDVKRFT-WIRQLLEWQQE 367
>gi|428776221|ref|YP_007168008.1| (p)ppGpp synthetase I SpoT/RelA [Halothece sp. PCC 7418]
gi|428690500|gb|AFZ43794.1| (p)ppGpp synthetase I, SpoT/RelA [Halothece sp. PCC 7418]
Length = 765
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 206/340 (60%), Gaps = 16/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A L+ +G S ++AAG LHD ++D ++ + I FG GV LVE
Sbjct: 64 RRSGEPYIAHPVAVAGLIRDLGGGSAMIAAGFLHDIVEDTDITCEEIQEKFGEGVRHLVE 123
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ +SKT +A+ MFLAMA D R V++KLADRLHNM TL+ L
Sbjct: 124 GVTKLSKFK-------FSSKTERQAENFRRMFLAMAKDIRVVVVKLADRLHNMRTLEHLK 176
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+++ A ET EIF PLANRLGI +K +LE+L FK+L P+ E+ + + EA
Sbjct: 177 PEKQKQIALETREIFAPLANRLGIGRFKWELEDLSFKYLEPEAFQEIRELVADRRADREA 236
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I+ L Q I L GR K LY I+ KM +++ +EI+D+ G+R+I++
Sbjct: 237 RIENVIQILHQRFDQAGIEIEELKGRPKHLYGIYQKMQQQQKEFEEIYDLAGVRVILKTR 296
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
EDCY+AL V+H + +PG+ KDYI PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 297 EDCYRALAVIHDAFKPIPGRFKDYIGLPKPNRYQSLHTTVIGTYGKPIEMQIRTMEMHHI 356
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL----QMVEWARWVLTWQ 333
AE+G AAHW YKE S F + W R +L WQ
Sbjct: 357 AEYGIAAHWLYKETGGS-SDFKPTAEDEKFTWLRQLLEWQ 395
>gi|404328487|ref|ZP_10968935.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 724
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 213/340 (62%), Gaps = 11/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H VE A +L + + T + +G LHD ++D ++ D + FG VA LV
Sbjct: 37 LRKSGEPYITHPVEVAGILVNLKMDVTTIMSGFLHDVVEDTPVTLDDVRNEFGDNVAMLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++E+ +A+ MF+AMA D R V++KLADRLHNM TL +
Sbjct: 97 DGVTKLRHFEYSSKEDQ------QAENHRKMFVAMARDLRCVIVKLADRLHNMRTLKYMT 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K+ + A ET+EIF PLANRLGIS K +LE++ ++LNP Q+ ++ + + + +E A
Sbjct: 151 KEKQIQKANETMEIFAPLANRLGISAIKWELEDISLRYLNPQQYYKIVNLMKQKREEREA 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +E L++ +K +I + GR K +YSI+ KM+ + +EI+D++ +R+IVE+
Sbjct: 211 YIAQVVEDLKKYVKSVHIKAEI-SGRPKHIYSIYRKMVNQHKQFNEIYDLFAVRIIVESI 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQ+RT+EMH
Sbjct: 270 KDCYAILGIIHTHWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGDPLEVQVRTEEMHDV 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
AE+G AAHW YKEG ++ + + + W R +L +Q E
Sbjct: 330 AEYGIAAHWAYKEGKTKNINNKFEDKLTWFREILEYQKET 369
>gi|392960862|ref|ZP_10326327.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
gi|421054380|ref|ZP_15517348.1| RelA/SpoT family protein [Pelosinus fermentans B4]
gi|421059720|ref|ZP_15522283.1| RelA/SpoT family protein [Pelosinus fermentans B3]
gi|421068769|ref|ZP_15530010.1| RelA/SpoT family protein [Pelosinus fermentans A12]
gi|421071241|ref|ZP_15532361.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
gi|392439135|gb|EIW16869.1| RelA/SpoT family protein [Pelosinus fermentans A12]
gi|392440738|gb|EIW18398.1| RelA/SpoT family protein [Pelosinus fermentans B4]
gi|392447157|gb|EIW24411.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
gi|392454759|gb|EIW31581.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
gi|392458415|gb|EIW34950.1| RelA/SpoT family protein [Pelosinus fermentans B3]
Length = 736
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/452 (37%), Positives = 244/452 (53%), Gaps = 45/452 (9%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+ Y+ H + A +L+ + ++ ++A LLHD ++D S + + + FG VA LV+
Sbjct: 44 RASGEEYICHPLGVAKILSELQIDALTISASLLHDVVEDTAFSLEELEKLFGKEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ ++E + + MFLAMA D R VLIKLADRLHNM TL +P
Sbjct: 104 GVTKLSRIEYKSKEEQ------QLENFRKMFLAMAKDIRVVLIKLADRLHNMRTLKHMPE 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++R ++ET EIF PLA+RLGIS+ K +LE+L F++L P+++ EL K+ + E +
Sbjct: 158 HKQRRISQETHEIFAPLAHRLGISSVKWELEDLAFRYLEPEKYYELVEKVKQKRREREQL 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AI+ L L D I + GR K YSI+ KMLK + EI+D+ +R++V+ +
Sbjct: 218 INEAIKILSARLDDVEIKADI-QGRPKHFYSIYKKMLKGNKDLSEIYDLSAVRILVDTVK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VVH LW +P + KDYI PK N YQSLHT V PLE+QIRT +MH +
Sbjct: 277 DCYGALGVVHTLWKPLPLRFKDYIAMPKSNMYQSLHTTVISTEGQPLEIQIRTMDMHRTS 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPS 358
E+G AAHWRYKEG + + + W R + WQ + ++ P F
Sbjct: 337 EYGIAAHWRYKEGSKGANKDFDEKLTWLRQLSEWQQD--------------LRDPHEFME 382
Query: 359 HADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFP 418
FS VFV + D V + P ST +D R G
Sbjct: 383 TVKMDIFS--------DEVFVFTPKGD---VIDLPAGSTPIDFAYRIHTGVGNRC----- 426
Query: 419 LKEELRPRLNHKAVGDPRCKLKMGDVVELTPA 450
+ R+N K + KL GD+VE+ +
Sbjct: 427 ----VGARINGKMI-PLETKLTNGDIVEIVTS 453
>gi|313679281|ref|YP_004057020.1| (p)ppGpp synthetase I SpoT/RelA [Oceanithermus profundus DSM 14977]
gi|313151996|gb|ADR35847.1| (p)ppGpp synthetase I, SpoT/RelA [Oceanithermus profundus DSM
14977]
Length = 734
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 223/355 (62%), Gaps = 27/355 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYDYIFRTFGAGVADL 59
R SG+PY+ H V +LA + + + AGLLHDT++D +S++ I + FG VA +
Sbjct: 45 FRRSGEPYITHPVAVTEILAELQMDPDSLIAGLLHDTVEDVESVSFETIRQRFGEDVARI 104
Query: 60 VEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
VEG +K+S+LSK+A T+ + +A+ L MF+AM D R +++KLADR HNM TL+ +
Sbjct: 105 VEGETKVSKLSKMA----TSVEDQQAENLRQMFIAMTRDLRIIIVKLADRTHNMRTLEFM 160
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--E 176
P K++R +KETLEIF P+A+RLGI K++LE+L F++L+P+++ L +L
Sbjct: 161 PPEKQRRISKETLEIFAPMAHRLGIGQIKLELEDLAFRYLHPEEYAALVERLAHHSQAHR 220
Query: 177 AMVTSAIEKLEQALKDK-----NISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 231
+V +A LE AL++ ++ + GR K L+SI KM +++ T+++I+D+ LR
Sbjct: 221 EVVDNAKGALEHALENDYVLGLSVDGFSVSGRTKHLFSIWKKMQREEKTLEQIYDLLALR 280
Query: 232 LIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 278
+I++ ++ CY L +VH LW +PG++KDYI +PK NGYQSLHT V
Sbjct: 281 VILDPKPVASPEEAASREKQVCYHVLGLVHALWPPIPGRVKDYIAQPKPNGYQSLHTTVI 340
Query: 279 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
G +PLEVQIRT+EMH AE+G AAHW YKEG + + + V+W + WQ
Sbjct: 341 TPGGLPLEVQIRTREMHRVAEYGVAAHWLYKEG-LTDPNQLKRRVKWIELLQEWQ 394
>gi|428320218|ref|YP_007118100.1| (p)ppGpp synthetase I, SpoT/RelA [Oscillatoria nigro-viridis PCC
7112]
gi|428243898|gb|AFZ09684.1| (p)ppGpp synthetase I, SpoT/RelA [Oscillatoria nigro-viridis PCC
7112]
Length = 756
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/346 (43%), Positives = 213/346 (61%), Gaps = 14/346 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +L +G N+ ++AAG LHD ++D ++ + I + FGA V LVE
Sbjct: 62 RKSGEPYICHPVAVAGILRYMGGNNVMIAAGFLHDIVEDTDITLEEIEQRFGAEVRQLVE 121
Query: 62 GVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT A+ MFLAMA D R +++KLADRLHNM TL+ L
Sbjct: 122 GVTKLSKF-------NFSSKTERLAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLS 174
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EA 177
K++ A ET +IF PLANRLGI +K +LE+L FK+L P+ + E+ + V+ D E
Sbjct: 175 EEKQRSIALETRDIFAPLANRLGIGRFKWELEDLAFKYLEPEAYREIQELVAVKRADRET 234
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + L + L + I + GR K LY I+ KM +++ ++++DI +R+IVE
Sbjct: 235 QLAEVTDCLRERLDNLGIKCYEVSGRPKHLYGIYAKMQRRQKGFNQVYDIAAVRIIVETN 294
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY+AL +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT MH
Sbjct: 295 DDCYRALAIVHDSFRPIPGRFKDYIGLPKANRYQSLHTGVIGTSGRPIEVQIRTVAMHHI 354
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE +++ + W R +L WQ + + DR
Sbjct: 355 AEYGIAAHWKYKETGGSNTTVTGDDEKFTWLRQLLEWQSD-LKDDR 399
>gi|256851206|ref|ZP_05556595.1| ppGpp synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260660630|ref|ZP_05861545.1| ppGpp synthetase [Lactobacillus jensenii 115-3-CHN]
gi|256616268|gb|EEU21456.1| ppGpp synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260548352|gb|EEX24327.1| ppGpp synthetase [Lactobacillus jensenii 115-3-CHN]
Length = 747
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 199/318 (62%), Gaps = 14/318 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D I R FG VA +V+
Sbjct: 47 RASGQPYIIHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKREFGEDVAFIVD 106
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + E A+ M +AMA D R +++KLADRLHNM TLD L
Sbjct: 107 GVTKLNKYEYKSHEE------FLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLRP 160
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH----TELSSKLVECFDE 176
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP+ + +++SK E E
Sbjct: 161 DKQRRIASETLDIYAPLADRLGIGTIKWELEDMSLHYLNPEAYYNIVNQMNSKRSER--E 218
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ +AI L+ L +I + + GR K +YSI+ KM+ K EI D+ +R+IV+N
Sbjct: 219 GYIETAIAYLKDTLDSLHIKYDIY-GRPKHIYSIYKKMVNKHKDFSEIFDLLAVRVIVQN 277
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G LE+QIRT++MH
Sbjct: 278 VRDCYAVLGAVHTKWKPMPGRFKDYIAVPKANGYQSLHTTIIGPGGKTLEIQIRTQQMHE 337
Query: 297 QAEFGFAAHWRYKEGDCQ 314
AE+G AAHW YK+GD Q
Sbjct: 338 VAEYGVAAHWAYKKGDTQ 355
>gi|291522836|emb|CBK81129.1| (p)ppGpp synthetase, RelA/SpoT family [Coprococcus catus GD/7]
Length = 770
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/351 (39%), Positives = 217/351 (61%), Gaps = 22/351 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A++LA + + + GLLHD ++D ++ + I R F A +A +V
Sbjct: 67 LRKSGEPYIIHPLCVALILADLELDKETIVGGLLHDVVEDTIMTEEDITREFSAEIALIV 126
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL QLS + ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 127 SGVTKLGQLSY-----SKDKVEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMT 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEA 177
K++ A+ET++I+ P+A RLGIS K++L++L ++L P+ + +L+ + L +A
Sbjct: 182 PAKQKEKARETMDIYAPIAQRLGISKIKIELDDLSLRYLEPEVYYDLARQINLKRSERQA 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V + +E++ Q + I V GR K +SI+ KM+ + T+DEI+D++ +R+IV+
Sbjct: 242 FVDAIVEEVSQHMAQSGIKAQV-NGRVKHFFSIYKKMVNQDKTLDEIYDLFAVRIIVDTV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT +MH
Sbjct: 301 KDCYAALGIIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPNGQPFEIQIRTFDMHRT 360
Query: 298 AEFGFAAHWRYKEG-------DCQHSSFVLQMVEWARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE D + + W R +L WQ + MS ++
Sbjct: 361 AEYGIAAHWKYKEDPNAKNVEDSEEAKLT-----WLRQILEWQTD-MSDNK 405
>gi|86609008|ref|YP_477770.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557550|gb|ABD02507.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 760
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/338 (44%), Positives = 208/338 (61%), Gaps = 15/338 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H V A LL +G ++ VAAGLLHD ++D ++ + + FG+ V LVE
Sbjct: 68 RKSGDPYIAHPVAVATLLRELGGDAVTVAAGLLHDVIEDTEVTPEALEAEFGSEVRLLVE 127
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MF+AMA D R +++KLADRLHNM TL L
Sbjct: 128 GVTKLSKF-------NFSSKTEQQAENFRRMFVAMAKDIRVIVVKLADRLHNMRTLQYLS 180
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
K+++ A ET+EIF PLANRLGI +K +LE+L FK+L+ + + ++ ++K E
Sbjct: 181 PSKQRQIAAETMEIFAPLANRLGIWHFKWELEDLAFKYLDYEAYRKIQELVNAKRAE--R 238
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA + + IE+L Q L + + GR K LYSI+ KM ++ EI+D+ +R+IV
Sbjct: 239 EAEIQAFIEELRQNLLQAGLEHFEISGRPKHLYSIYRKMQQQHKEFHEIYDLSAVRVIVH 298
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+CY+ L VVH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT+EMH
Sbjct: 299 TNSECYRVLAVVHNCFRPIPGRFKDYIGLPKANRYQSLHTAVIGLQGRPVEVQIRTEEMH 358
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHW+YKE + W R +L WQ
Sbjct: 359 RVAEYGIAAHWKYKEAGSTTVKPDEERFTWLRQLLEWQ 396
>gi|269836765|ref|YP_003318993.1| (p)ppGpp synthetase I SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
gi|269786028|gb|ACZ38171.1| (p)ppGpp synthetase I, SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
Length = 748
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 207/341 (60%), Gaps = 6/341 (1%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A++LA + + + A LLHD ++D S + + FG +A LV
Sbjct: 65 LRRSGDPYISHPLAVAIILAEMQLDQETLCAALLHDVIEDTDTSVEELTTIFGERIARLV 124
Query: 61 EGVSKLSQLSKLARENN-TASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDAL 118
+GV+KL ++ E++ T K +A+ L MFLAM D R VLIKLADRLHNM TL+ +
Sbjct: 125 DGVTKLGRIRWATEEDSVTREKERQAESLRKMFLAMVDDVRVVLIKLADRLHNMRTLEHM 184
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
P K+ R A+ET+EI+ PLANRLGI K +LE+L ++L+P + + L E
Sbjct: 185 PRAKQLRSAQETMEIYAPLANRLGIWQLKSELEDLALRYLDPQTYFSIKRALDRRGTDRE 244
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I L +AL + I + R K + SI KM +K + DEI+D+ G+R+IV+
Sbjct: 245 RYLQRVINDLTKALAEAGIRAEI-SAREKHITSIARKMERKGRSFDEIYDVLGVRVIVDE 303
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
++DCY AL V+H +W +PG+ DYI PK + YQS+HT V G PLE+QIRT EMH
Sbjct: 304 KKDCYGALGVIHTMWHPIPGEFDDYIATPKESMYQSIHTAVLGPDGHPLEIQIRTAEMHH 363
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAM 337
AE+G AAHWRYKEG + V + W R ++ W+ E +
Sbjct: 364 VAEYGIAAHWRYKEG-ARPDPNVEAKIAWLRQLMDWRDEVV 403
>gi|330466917|ref|YP_004404660.1| RelA/SpoT family protein [Verrucosispora maris AB-18-032]
gi|328809888|gb|AEB44060.1| RelA/SpoT family protein [Verrucosispora maris AB-18-032]
Length = 823
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/345 (44%), Positives = 209/345 (60%), Gaps = 23/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D + FG VA LV+
Sbjct: 135 RKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRTDFGGEVALLVD 194
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 195 GVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPR 246
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E++ + E EA+
Sbjct: 247 PKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREAL 306
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +K++ LK I GR K LYSI+ KM+ + ++I+D+ G+R++V+
Sbjct: 307 LRQVTQKVQTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDIYDLVGVRILVDTVR 365
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH A
Sbjct: 366 DCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTYAMHRTA 425
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 426 EFGIAAHWKYKEHKGTQIVGPPAH----IDEMTWLRQLLDWQREA 466
>gi|197119579|ref|YP_002140006.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
bemidjiensis Bem]
gi|197088939|gb|ACH40210.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter bemidjiensis Bem]
Length = 716
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 209/337 (62%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H +E A +LA + + V GLLHDT++D +++ + FGA VA LV+
Sbjct: 39 RLSGEPYLIHPMEVAGILADLRLDLPAVVTGLLHDTVEDTLTTHEELESLFGAEVARLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ +E + +A+ M LAMA D R +L+KLADRLHNM TL P
Sbjct: 99 GVTKIGKIHFKTKEES------QAENFRKMLLAMATDIRVILVKLADRLHNMRTLQYQPE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKETL+I+ P+ANRLGIS K +LE+L F++L P + +L+ K+ + E +
Sbjct: 153 PKQRTIAKETLDIYAPIANRLGISWVKGELEDLSFRYLEPQLYYDLAGKVAKKKQERESY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + E +++ L++ I V GR K LYSI+ KM + + +DEI+D+ +R+ VE+
Sbjct: 213 VATVKEIIKKQLEEHGIKGDV-SGRSKHLYSIYRKMQSRNVDIDEIYDLIAIRVSVEDIR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L ++H W +PG+ KDYI PK N YQSLHT V G +EVQIRT EMH A
Sbjct: 272 ECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGERMEVQIRTVEMHRVA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E G AAHW+YKEG V + W R +L WQ E
Sbjct: 332 ESGIAAHWKYKEGKGYDDKDVKRFT-WIRQLLEWQQE 367
>gi|300812618|ref|ZP_07093031.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496399|gb|EFK31508.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 753
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/320 (45%), Positives = 196/320 (61%), Gaps = 18/320 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D I FGA VA +V+
Sbjct: 44 RASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + K A+ M +AMA D R +L+KLADRLHNM TL+ L
Sbjct: 104 GVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP E K+V D
Sbjct: 158 DKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYMNP----EAYYKIVSMMDAKRSE 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + AI+ L L I + + GR K +YSI+ KM+ K +EI+D+ +R+IV
Sbjct: 214 REGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNKHKDFNEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+EM
Sbjct: 273 PTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTEEM 332
Query: 295 HLQAEFGFAAHWRYKEGDCQ 314
H AE+G AAHW YK G+ Q
Sbjct: 333 HKVAEYGVAAHWAYKRGNFQ 352
>gi|212696222|ref|ZP_03304350.1| hypothetical protein ANHYDRO_00758 [Anaerococcus hydrogenalis DSM
7454]
gi|212676851|gb|EEB36458.1| hypothetical protein ANHYDRO_00758 [Anaerococcus hydrogenalis DSM
7454]
Length = 726
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 213/340 (62%), Gaps = 15/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y +H + A ++ + + + AGL+HD L+D +S D + FG + LV+
Sbjct: 44 RNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDTPVSKDQMRDLFGEEITFLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L+ RE +A+ + M LAM+ D R +LIKLADRLHNM TL+
Sbjct: 104 GVTKLKKLNYKTREEK------QAENIRKMVLAMSNDIRVILIKLADRLHNMRTLEYKTE 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFDE 176
K+++ A ETLEI+VPLA+RLGI T K +LE+LCF++ P+++ EL+ +K E E
Sbjct: 158 KKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQKPEEYYELAQMVHNKRRE--RE 215
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ IE L+++L I++ + GR K L+SI+ KM + K+ +EI+D+ +R++V+
Sbjct: 216 NYINEIIETLDKSLSSSKINYEI-SGRPKGLFSIYKKMSRNKIEFNEIYDLTAVRVLVDT 274
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY+ L VH +W +P ++KDYI +PK NGY+SLHT V G P EVQIRT++MH
Sbjct: 275 VADCYEVLGKVHSIWRPIPNRIKDYIGQPKPNGYRSLHTTVFGADSKPFEVQIRTRQMHY 334
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
+ E+G AAHW+YKE + + F ++ + R ++ WQ E
Sbjct: 335 ECEYGIAAHWKYKENKSKSTEFDEKLT-FIRQIMEWQKEG 373
>gi|159037429|ref|YP_001536682.1| (p)ppGpp synthetase I SpoT/RelA [Salinispora arenicola CNS-205]
gi|157916264|gb|ABV97691.1| (p)ppGpp synthetase I, SpoT/RelA [Salinispora arenicola CNS-205]
Length = 827
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/345 (44%), Positives = 210/345 (60%), Gaps = 23/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D + FG VA LV+
Sbjct: 139 RKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRTDFGGEVALLVD 198
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 199 GVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLIFLPR 250
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ AKETLEI PLA+RLG++T K +LE+L F L P ++ E++ + E EA+
Sbjct: 251 PKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRYEEINRLIGEHQPQREAL 310
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +K+ LK I V GR K LYSI+ KM+ + ++I+D+ G+R++V+
Sbjct: 311 LRQVTKKVGTDLKAAKIRAEV-TGRPKHLYSIYQKMIVRGRDFNDIYDLVGVRILVDTVR 369
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH A
Sbjct: 370 DCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTYAMHRTA 429
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 430 EFGIAAHWKYKEHKGTQIVGPPAH----IDEMTWLRQLLDWQREA 470
>gi|357038708|ref|ZP_09100505.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum gibsoniae DSM
7213]
gi|355359500|gb|EHG07262.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum gibsoniae DSM
7213]
Length = 725
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 205/335 (61%), Gaps = 11/335 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V +L + + + AGLLHDT++D + + I + FG VA LV+
Sbjct: 38 RNSGEPYITHPVAITTILTDLEMDMDTLVAGLLHDTVEDTGTTLEDIEKYFGREVAQLVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+L ++E + + L MFLAMA D R VLIKLADRLHNM TL
Sbjct: 98 GVTKLSRLEYRSKEER------QVENLRKMFLAMARDIRVVLIKLADRLHNMRTLQYHLE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A ETLEIF PLA+RLGI K +LE+L + NP+++ EL+ + + E
Sbjct: 152 HKQREIALETLEIFAPLAHRLGIYRLKWELEDLALRFSNPEKYYELADLVARTREKREEY 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ S I L + + + I+ + GR K+LYSI+ KM K++L ++I+D+ +R++V++
Sbjct: 212 IRSIISVLHKKMMEVKINAEI-QGRPKNLYSIYMKMQKQQLEFNQIYDVMAVRVLVDSVR 270
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH LW +PG+ KDYI PK N YQSLHT V PLE+QIRT EMH +
Sbjct: 271 DCYAVLGTVHTLWVPIPGRFKDYIAMPKSNMYQSLHTTVVSPQGDPLEIQIRTWEMHRTS 330
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKEG + F ++ W R +L WQ
Sbjct: 331 EYGIAAHWRYKEGGGKDGDFDRKL-SWLRQILDWQ 364
>gi|313123577|ref|YP_004033836.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312280140|gb|ADQ60859.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 753
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/316 (44%), Positives = 198/316 (62%), Gaps = 10/316 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D I FGA VA +V+
Sbjct: 44 RASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + K A+ M +AMA D R +L+KLADRLHNM TL+ L
Sbjct: 104 GVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP+++ ++ S + E
Sbjct: 158 DKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYMNPEEYYKIVSMMDAKRSEREDY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ AI+ L L I + + GR K +YSI+ KM+ K +EI+D+ +R+IV +
Sbjct: 218 IKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNKHKDFNEIYDLLAVRVIVPTVK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+EMH A
Sbjct: 277 DCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTEEMHKVA 336
Query: 299 EFGFAAHWRYKEGDCQ 314
E+G AAHW YK G+ Q
Sbjct: 337 EYGVAAHWAYKRGNFQ 352
>gi|416384945|ref|ZP_11684705.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Crocosphaera watsonii WH 0003]
gi|357264961|gb|EHJ13781.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Crocosphaera watsonii WH 0003]
Length = 744
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 215/352 (61%), Gaps = 15/352 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +L +G + ++AAG LHD ++D ++ + I + FG VA LVE
Sbjct: 55 RKSGEPYIAHPVAVAGILRELGGDKAMIAAGFLHDVVEDTDVTVEDIEQRFGQEVALLVE 114
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N ++KT +A+ MFLAMA D R +++KL+DRLHNM TL+ L
Sbjct: 115 GVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRVIVVKLSDRLHNMRTLEPLR 167
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A ET EIF PLANRLGI K +LE+L FK+L + + ++ + + E E
Sbjct: 168 PDKQRRIALETKEIFAPLANRLGIWRVKWELEDLSFKYLESEDYRKIQNFVSEKRIDRET 227
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + L + L I L GR K LY I+CKM ++ EI+D+ LR+IV+
Sbjct: 228 RIETVKKLLSKRLDTMGIQVEELQGRPKHLYGIYCKMQRQNKGFHEIYDLAALRIIVKTN 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY++L VVH L+ +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 288 EECYRSLAVVHDLFKPMPGRFKDYIGLPKPNLYQSLHTTVVGLNGRPLEIQIRTLEMHHI 347
Query: 298 AEFGFAAHWRYKE-GDCQHSSFV--LQMVEWARWVLTWQCEAMSKDRSCVGN 346
AE+G AAHW+YKE G H+ F + W R +L WQ + + D+ V N
Sbjct: 348 AEYGIAAHWKYKETGGSDHTQFSDEDEKFTWLRQLLDWQND-LKDDQEYVDN 398
>gi|262202238|ref|YP_003273446.1| RelA/SpoT family protein [Gordonia bronchialis DSM 43247]
gi|262085585|gb|ACY21553.1| RelA/SpoT family protein [Gordonia bronchialis DSM 43247]
Length = 790
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 208/345 (60%), Gaps = 20/345 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D + + FGA VA LV+
Sbjct: 99 RKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYTLDQLEKDFGAEVAHLVD 158
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 159 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 210
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 211 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 270
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL IS V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 271 LARVRADINNALSAARISATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGMRILCDEVR 329
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 330 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTHEMHRTA 389
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHWRYKE G S+ + +M W R +L WQ EA
Sbjct: 390 EFGIAAHWRYKESGYKDRKGRRTDSTEIDEMA-WMRQLLDWQREA 433
>gi|117928545|ref|YP_873096.1| (p)ppGpp synthetase I SpoT/RelA [Acidothermus cellulolyticus 11B]
gi|117649008|gb|ABK53110.1| (p)ppGpp synthetase I, SpoT/RelA [Acidothermus cellulolyticus 11B]
Length = 820
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 207/340 (60%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G + A LLHDT++D + D + R FG VA LV
Sbjct: 120 LRRSGDPYITHPLAVATILAELGMTPPTIVAALLHDTVEDTTYTLDQLRRDFGDEVASLV 179
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL R + TVE R M +AMA D R +++KLADRLHNM TL LP
Sbjct: 180 DGVTKLD------RVKYGDAATVETVR--KMVVAMARDPRVLVLKLADRLHNMRTLRYLP 231
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A+ETLEI+ PLA+RLG++T K +LE+L F L P ++ E++ + E +
Sbjct: 232 PEKQERKARETLEIYAPLAHRLGMNTLKWELEDLSFATLYPKRYEEIARLVAERAPSRDT 291
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + IE++ L+ I V GR K YSI+ KM+ + +I+D+ G+R++V+
Sbjct: 292 YLANVIEQVSAQLRAAKIKATV-TGRPKHYYSIYQKMIVRGRDFADIYDLLGVRVLVDTV 350
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL ++H +W VPG+ KD+I PKFN YQSLHT V G P+EVQIRT MH +
Sbjct: 351 RDCYAALGIIHAMWNPVPGRFKDFIAMPKFNLYQSLHTTVIGPEGKPVEVQIRTHAMHRR 410
Query: 298 AEFGFAAHWRYKEGDCQHSS-FVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YKE S+ + W R +L WQ EA
Sbjct: 411 AEYGIAAHWKYKEEATGSSTKGSGNDMAWLRQLLDWQKEA 450
>gi|67921546|ref|ZP_00515064.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
gi|67856658|gb|EAM51899.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
Length = 744
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 215/352 (61%), Gaps = 15/352 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +L +G + ++AAG LHD ++D ++ + I + FG VA LVE
Sbjct: 55 RKSGEPYIAHPVAVAGILRELGGDKAMIAAGFLHDVVEDTDVTVEDIEQRFGQEVALLVE 114
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N ++KT +A+ MFLAMA D R +++KL+DRLHNM TL+ L
Sbjct: 115 GVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRVIVVKLSDRLHNMRTLEPLR 167
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A ET EIF PLANRLGI K +LE+L FK+L + + ++ + + E E
Sbjct: 168 PDKQRRIALETKEIFAPLANRLGIWRVKWELEDLSFKYLESEDYRKIQNFVSEKRIDRET 227
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + L + L I L GR K LY I+CKM ++ EI+D+ LR+IV+
Sbjct: 228 RIETVKKLLSKRLDTMGIQVEELQGRPKHLYGIYCKMQRQNKGFHEIYDLAALRIIVKTN 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY++L VVH L+ +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 288 EECYRSLAVVHDLFKPMPGRFKDYIGLPKPNLYQSLHTTVVGLNGRPLEIQIRTLEMHHI 347
Query: 298 AEFGFAAHWRYKE-GDCQHSSFV--LQMVEWARWVLTWQCEAMSKDRSCVGN 346
AE+G AAHW+YKE G H+ F + W R +L WQ + + D+ V N
Sbjct: 348 AEYGIAAHWKYKETGGSDHTQFSDEDEKFTWLRQLLDWQND-LKDDQEYVDN 398
>gi|325262048|ref|ZP_08128786.1| GTP diphosphokinase [Clostridium sp. D5]
gi|324033502|gb|EGB94779.1| GTP diphosphokinase [Clostridium sp. D5]
Length = 767
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 216/345 (62%), Gaps = 12/345 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + ++LA + + + AG+LHD ++D ++ + + R F VA LV+
Sbjct: 70 RKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLEDVAREFSEEVALLVD 129
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS + V+A+ L MFLAMA D R ++IKLADRLHNM TL+ +
Sbjct: 130 GVTKLGQLSY-----SQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTP 184
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ET++I+ P+A+RLGIS K +L++L K+ P+ + L L E E
Sbjct: 185 AKQKEKARETMDIYAPIAHRLGISKIKTELDDLSLKYSQPEVYNNLVKDLNERKTEREEF 244
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++ +K+ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV++ +
Sbjct: 245 VQQIVAEVSTHMKNSHIHAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIVDSVK 303
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT+EMH A
Sbjct: 304 DCYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPSGQPFEIQIRTEEMHKTA 363
Query: 299 EFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCEAMSKDR 341
EFG AAHW+YKE S+ + + W R +L WQ + MS +R
Sbjct: 364 EFGIAAHWKYKESSAGKSAKAQEEEKLSWLRQILEWQRD-MSDNR 407
>gi|315503193|ref|YP_004082080.1| (p)ppGpp synthetase I SpoT/RelA [Micromonospora sp. L5]
gi|315409812|gb|ADU07929.1| (p)ppGpp synthetase I, SpoT/RelA [Micromonospora sp. L5]
Length = 823
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/345 (44%), Positives = 208/345 (60%), Gaps = 23/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D + FG VA LV+
Sbjct: 135 RKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRADFGGEVALLVD 194
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 195 GVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPR 246
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E++ + E EA+
Sbjct: 247 PKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREAL 306
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +K+ LK I GR K LYSI+ KM+ + ++I+D+ G+R++V+
Sbjct: 307 LRQVTQKVSTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDIYDLVGVRILVDTVR 365
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH A
Sbjct: 366 DCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTYAMHRTA 425
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 426 EFGIAAHWKYKEHKGTPVVGPPAH----IDEMTWLRQLLDWQREA 466
>gi|167746626|ref|ZP_02418753.1| hypothetical protein ANACAC_01337 [Anaerostipes caccae DSM 14662]
gi|167653586|gb|EDR97715.1| RelA/SpoT family protein [Anaerostipes caccae DSM 14662]
Length = 758
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 214/339 (63%), Gaps = 16/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D ++Y+ + R FG VA LV+
Sbjct: 64 RKSGEPYIIHPICVAIILAELELDRETIIAGLLHDVVEDTDVTYEDVVREFGVEVAQLVD 123
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS + V+A+ L MFLAMA D R +LIKLADRLHNM T+ +
Sbjct: 124 GVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMKP 178
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD + EL L + EA
Sbjct: 179 EKQKEKSRETMDIYAPIAHRLGISKIKVELDDLSLRYLKPDVYKELEHSLDSQKVRREAY 238
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++++ ++ I + GR K +SI+ KM+ + T+D+I+D++ +R+ V+ +
Sbjct: 239 IKEIVDEVSGHIERSGIKAEI-DGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIKVDTVK 297
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 298 DCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPEGHPFEIQIRTFEMHRIA 357
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 333
E+G AAHW+YKE + SS + E W R +L WQ
Sbjct: 358 EYGIAAHWKYKE---KSSSVGVNKEEEKLSWLREILEWQ 393
>gi|410459965|ref|ZP_11313653.1| GTP pyrophosphokinase [Bacillus azotoformans LMG 9581]
gi|409927803|gb|EKN64929.1| GTP pyrophosphokinase [Bacillus azotoformans LMG 9581]
Length = 733
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 208/337 (61%), Gaps = 12/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + VAAG LHD ++D ++ + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILAELEMDPVAVAAGFLHDVVEDTEVTLKDLEVAFNKEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSKEAQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQYYRIVNLMKNKRAERENQ 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I+++ + L + ++ + GR K +YSI+ KM+ + +EI+D+ +R++VE+ +
Sbjct: 218 VHEVIDEIRKRLDEVHLKADI-SGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRVLVESIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L V+H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGVIHTCWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGDPLEVQIRTTEMHQIA 336
Query: 299 EFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW YKEG Q+ + + + W R +L WQ
Sbjct: 337 EYGIAAHWAYKEGKQITQNRENLQEKMTWFREILEWQ 373
>gi|302866778|ref|YP_003835415.1| RelA/SpoT family protein [Micromonospora aurantiaca ATCC 27029]
gi|302569637|gb|ADL45839.1| RelA/SpoT family protein [Micromonospora aurantiaca ATCC 27029]
Length = 823
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/345 (44%), Positives = 208/345 (60%), Gaps = 23/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D + FG VA LV+
Sbjct: 135 RKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRADFGGEVALLVD 194
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 195 GVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPR 246
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E++ + E EA+
Sbjct: 247 PKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREAL 306
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +K+ LK I GR K LYSI+ KM+ + ++I+D+ G+R++V+
Sbjct: 307 LRQVTQKVSTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDIYDLVGVRILVDTVR 365
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH A
Sbjct: 366 DCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTYAMHRTA 425
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 426 EFGIAAHWKYKEHKGTPVVGPPAH----IDEMTWLRQLLDWQREA 466
>gi|407796127|ref|ZP_11143083.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
gi|407019481|gb|EKE32197.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
Length = 733
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 209/339 (61%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H V+ A +L + ++ +A+G LHDT++D ++ + + TF VA LV+
Sbjct: 44 RKSGEPYIIHPVQVAGILVNLELDAETIASGFLHDTVEDTGVTVEDLKVTFNEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSKEEQ------QAENHRKMFVAMAKDLRVILIKLADRLHNMRTLKHLPA 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA--M 178
K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + + +E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQYYRIVHLMKQKRNEREHY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I ++ L + NI L GR K LYSI+ KM+ + +EI+D+ +R++V + +
Sbjct: 218 VDEVINQIRGELDNVNIE-ADLDGRPKHLYSIYKKMVLQSKQFNEIYDLLAVRILVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIGPKGDPLEVQIRTHDMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQCEA 336
E+G AAHW YKEG S+ + + W R ++ WQ E
Sbjct: 337 EYGIAAHWAYKEGKQSGSTQSFEEKLSWFREIMEWQSET 375
>gi|403386962|ref|ZP_10929019.1| GTP pyrophosphokinase [Clostridium sp. JC122]
Length = 725
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 213/338 (63%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H +E A +LA +G +++ + AGLLHD ++D +Y+ I + F VADLV+
Sbjct: 37 RESGEPYIIHPLEVACILAELGLDTSTIVAGLLHDVIEDTDYTYEDICQMFSVEVADLVQ 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL ++ +E +AD + M LAMA D R +LIKLADRLHN+ TL
Sbjct: 97 GVSKLGKIKYKTKEEQ------QADNVRKMLLAMAKDIRVILIKLADRLHNLRTLKFKKE 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ AKETL+I+ PLA+RLGIS K +LE+L ++L+ ++ EL ++ + E
Sbjct: 151 AKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLHEKEYYELVKEISQKRAEREVQ 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + I+ L+ L I + GR K YSI+ KM+KK T+D+I D+ +R++V++
Sbjct: 211 IENIIKNLQDNLDKVGIKSEI-EGRPKHFYSIYRKMVKKNKTIDQIFDLTAVRVLVDDIG 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL +VH ++ +PG+ KDYI PK N YQS+HT V G P+E+QIRT EMH A
Sbjct: 270 DCYAALGIVHTIYKPIPGRFKDYIAMPKPNMYQSIHTTVIGPFGKPVEIQIRTYEMHRIA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW+YKEG ++ + + W R +L WQ E
Sbjct: 330 EYGIAAHWKYKEGISNNNDSLESRLSWLREMLEWQGET 367
>gi|220932056|ref|YP_002508964.1| (p)ppGpp synthetase I SpoT/RelA [Halothermothrix orenii H 168]
gi|219993366|gb|ACL69969.1| (p)ppGpp synthetase I, SpoT/RelA [Halothermothrix orenii H 168]
Length = 716
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 211/336 (62%), Gaps = 11/336 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+P++ H + A +LA + + ++A LLHD ++D ++ I FG +A LV
Sbjct: 37 FRVSGEPFIEHPLGVACILAELELDIISISAALLHDVVEDTSVTSKNIEEEFGDEIALLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL++L ++E + +A+ L MFLAM+ D R VLIKLADRLHNM TL L
Sbjct: 97 DGVTKLTRLEFKSKEEH------QAENLRKMFLAMSEDIRVVLIKLADRLHNMRTLRFLA 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAM- 178
K+ AKETLEI+ PLA+RLG+S K +LE+L F+ ++ + E++ K+ + +
Sbjct: 151 KEKQVEKAKETLEIYAPLAHRLGMSRLKWELEDLSFRFIDSKMYYEIAEKVAANRKQRIR 210
Query: 179 -VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ AI+ L L ++ I + GR K LYSI+ KM +K++ +EI+D+ +R+IV +
Sbjct: 211 DIKEAIKILNDKLGNQGI-LAEIYGRPKHLYSIYQKMKRKEVDFNEIYDLTAIRIIVNSV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+ L +VH++W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 270 KECYEVLGIVHEIWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPKGDPLEVQIRTPEMHRT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHW+YKEG F + + W R +L WQ
Sbjct: 330 AEYGIAAHWKYKEGKTGKDDFE-EKLSWLRQILEWQ 364
>gi|325846553|ref|ZP_08169468.1| GTP diphosphokinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481311|gb|EGC84352.1| GTP diphosphokinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 726
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 213/340 (62%), Gaps = 15/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y +H + A ++ + + + AGL+HD L+D +S D + FG + LV+
Sbjct: 44 RNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDTPVSKDQMRDLFGEEITFLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L+ RE +A+ + M LAM+ D R +LIKLADRLHNM TL+
Sbjct: 104 GVTKLKKLNYKTREEK------QAENIRKMVLAMSNDIRVILIKLADRLHNMRTLEYKTE 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKLVECFDE 176
K+++ A ETLEI+VPLA+RLGI T K +LE+LCF++ P+++ EL+ +K E E
Sbjct: 158 KKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQKPEEYYELAQMVHNKRRE--RE 215
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I+ L+++L I++ + GR K L+SI+ KM + K+ +EI+D+ +R++V+
Sbjct: 216 NYINEIIDTLDKSLSSSKINYEI-SGRPKGLFSIYKKMSRNKIEFNEIYDLTAVRVLVDT 274
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY+ L VH +W +P ++KDYI +PK NGY+SLHT V G P EVQIRT++MH
Sbjct: 275 VADCYEVLGKVHSIWRPIPNRIKDYIGQPKPNGYRSLHTTVFGADSKPFEVQIRTRQMHY 334
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
+ E+G AAHW+YKE + + F ++ + R ++ WQ E
Sbjct: 335 ECEYGIAAHWKYKENKSKSTEFDEKLT-FIRQIMEWQKEG 373
>gi|75911185|ref|YP_325481.1| (p)ppGpp synthetase I [Anabaena variabilis ATCC 29413]
gi|75704910|gb|ABA24586.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Anabaena
variabilis ATCC 29413]
Length = 751
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 205/340 (60%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H + A LL +G + ++AAG LHD ++D ++ + I FG V LVE
Sbjct: 60 RKSGELYISHPIAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVTIEEIEERFGPEVKQLVE 119
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS++ N SKT +A+ MFLAMA D R +++KLADRLHNM TL +
Sbjct: 120 GVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMS 172
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
R+R A+ET +IF PLANRLGI K +LE+L FK+L P+ ++ + E D E
Sbjct: 173 EDSRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKNLEPEAFRQMQKYVSEKRDAREE 232
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ A L L+ I L + GR K LYSI+ KM +++ +EI+D+ LR+IVE
Sbjct: 233 KLAKATAILRDRLQQAGIRCLDISGRPKHLYSIYQKMHRQQKEFNEIYDLAALRIIVETN 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 293 EECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRPLEVQIRTMEMHRI 352
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 335
AE+G AAHW+YKE +S + W R +L WQ +
Sbjct: 353 AEYGIAAHWKYKETGGSNSLITTSDEKFTWLRQLLEWQSD 392
>gi|418029539|ref|ZP_12668077.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|354689845|gb|EHE89818.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
Length = 753
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/320 (45%), Positives = 196/320 (61%), Gaps = 18/320 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D I FGA VA +V+
Sbjct: 44 RASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + K A+ M +AMA D R +L+KLADRLHNM TL+ L
Sbjct: 104 GVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP E K+V D
Sbjct: 158 DKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP----EAYYKIVYMMDAKRSE 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + AI+ L L I + + GR K +YSI+ KM+ K +EI+D+ +R+IV
Sbjct: 214 REGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNKHKNFNEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+EM
Sbjct: 273 PTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTEEM 332
Query: 295 HLQAEFGFAAHWRYKEGDCQ 314
H AE+G AAHW YK G+ Q
Sbjct: 333 HKVAEYGVAAHWAYKRGNFQ 352
>gi|229492002|ref|ZP_04385819.1| RelA/SpoT family protein [Rhodococcus erythropolis SK121]
gi|453071000|ref|ZP_21974227.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus qingshengii BKS
20-40]
gi|229321134|gb|EEN86938.1| RelA/SpoT family protein [Rhodococcus erythropolis SK121]
gi|452760083|gb|EME18426.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus qingshengii BKS
20-40]
Length = 803
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 208/340 (61%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + + FG VA LV+
Sbjct: 116 RKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEELTKDFGDEVAHLVD 175
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 176 GVTKLDKV--------VLGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 227
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 228 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEIVRLVADRAPSRDTY 287
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ L I+ +V GR K +SI+ KM+ K D+IHD+ G+R++ E
Sbjct: 288 LAKVRAEINSTLSASRINAIV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCEEVR 346
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH A
Sbjct: 347 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTQDMHRTA 406
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
EFG AAHWRYKE +H+ + ++ + W R +L WQ EA
Sbjct: 407 EFGIAAHWRYKETKGKHAGDIAEVDDMAWMRQLLDWQREA 446
>gi|72383394|ref|YP_292749.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL2A]
gi|72003244|gb|AAZ59046.1| metal dependent phosphohydrolase [Prochlorococcus marinus str.
NATL2A]
Length = 775
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/334 (45%), Positives = 203/334 (60%), Gaps = 16/334 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H V A LL IGA+++V+AAG LHD ++D ++ + + FG+ V LV
Sbjct: 84 FRKSGEPYITHPVAVADLLREIGASASVIAAGFLHDVVEDTDITPEQLEGYFGSEVRYLV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + NN +A+ L MFLAM+ D R VL+KLADRLHNM T+ L
Sbjct: 144 EGVTKLGGIHF----NNRTE--AQAENLRKMFLAMSSDIRVVLVKLADRLHNMRTISYLG 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+ R A+ET EI+ PLANRLGI K +LE+L FK L PD E+ ++ E
Sbjct: 198 EEKQTRIARETREIYAPLANRLGIGRLKWELEDLAFKLLEPDPFREIQQQIASKRSEREE 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + ++ L+ L + + GR K LY I KM ++K EI D+ LR+IV +
Sbjct: 258 RLNTTVQLLKDRLNSAGLHQCEVSGRPKHLYGIWSKMQRQKKEFHEIFDVAALRIIVSDV 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 318 ETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTPEMHRV 376
Query: 298 AEFGFAAHWRYKEG------DCQHSSFVLQMVEW 325
+EFG AAHW+YKEG D + +++ Q+VEW
Sbjct: 377 SEFGIAAHWKYKEGGSPANPDSEKFNWLRQLVEW 410
>gi|429760116|ref|ZP_19292606.1| GTP diphosphokinase [Veillonella atypica KON]
gi|429178521|gb|EKY19799.1| GTP diphosphokinase [Veillonella atypica KON]
Length = 746
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 205/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A +LA + + + A LLHD ++D + + I + FGA VA LV
Sbjct: 57 FRASGEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGAEVAFLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 117 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKDMR 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E
Sbjct: 171 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQARED 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V +E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+
Sbjct: 231 IVNDTMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTV 289
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H +W +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 290 PDCYAVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 349
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 350 SEYGVAAHWRYKEGNKGADKEFDQKVAWLRQVLEWQ 385
>gi|303229459|ref|ZP_07316249.1| GTP diphosphokinase [Veillonella atypica ACS-134-V-Col7a]
gi|302515995|gb|EFL57947.1| GTP diphosphokinase [Veillonella atypica ACS-134-V-Col7a]
Length = 746
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 205/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A +LA + + + A LLHD ++D + + I + FGA VA LV
Sbjct: 57 FRASGEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGAEVAFLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 117 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMR 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E
Sbjct: 171 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQARED 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V +E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+
Sbjct: 231 IVNDTMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTV 289
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H +W +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 290 PDCYAVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 349
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 350 SEYGVAAHWRYKEGNKGADKEFDQKVAWLRQVLEWQ 385
>gi|418702279|ref|ZP_13263190.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410758798|gb|EKR25024.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 674
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 243/455 (53%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S + + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D RA+LIKLAD+ HN+ TL P
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRAILIKLADKTHNLRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|343924320|ref|ZP_08763871.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia alkanivorans NBRC
16433]
gi|343765754|dbj|GAA10797.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia alkanivorans NBRC
16433]
Length = 787
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 203/343 (59%), Gaps = 17/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + R FG VA LV+
Sbjct: 97 RKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQALERDFGQEVAHLVD 156
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 157 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 208
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 209 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 268
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I V GR K +SI+ KM+ K D+IHD+ G+R++ E +
Sbjct: 269 LARVRADINNALSAARIQATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGMRILCEEDR 327
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 328 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTHEMHRTA 387
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
EFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 388 EFGIAAHWRYKESGYRKSGKKSDTAEIDDMAWMRQLLDWQREA 430
>gi|229828401|ref|ZP_04454470.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
14600]
gi|229792995|gb|EEP29109.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
14600]
Length = 790
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 217/347 (62%), Gaps = 11/347 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + GLLHD ++D +S D + R F +A LV+
Sbjct: 76 RKSGEPYIIHPLSVALILADLELDKETIVGGLLHDVVEDTVMSLDDVRREFSDEIALLVD 135
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS + ++A+ L MFLAM+ D R +LIKLADRLHNM TL +
Sbjct: 136 GVTKLGQLSY-----DADKVEIQAENLRKMFLAMSKDIRVLLIKLADRLHNMRTLKFMTP 190
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ A+ET+EI+ PLA RLGIS KV+L++L K L PD + +L +L + E
Sbjct: 191 AKQKEKARETMEIYAPLAQRLGISKVKVELDDLALKFLEPDAYYDLLEQLNQRESERSEY 250
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ S + + + + I + GR K L+SI+ KM+ + T+D+I+D++ +R+IV++ +
Sbjct: 251 IQSLADLVTRQIDAAGIKAKIY-GRAKHLFSIYKKMVNQHKTLDQIYDLFAVRIIVDDLK 309
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY +L ++H+ + +PG+ KDYI PK N YQSLHT V G P E+QIRT EMH +
Sbjct: 310 DCYASLGIIHEHYTPIPGRFKDYIAMPKPNMYQSLHTTVIGPKGQPFEIQIRTWEMHRIS 369
Query: 299 EFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCV 344
E+G AAHW+YKE G+ ++ Q + W R +L WQ + M+ ++ V
Sbjct: 370 EYGIAAHWKYKESGEGATTNQEEQKLSWLRQILEWQ-QDMTDNKEFV 415
>gi|227871732|ref|ZP_03990140.1| GTP diphosphokinase, partial [Oribacterium sinus F0268]
gi|227842420|gb|EEJ52642.1| GTP diphosphokinase [Oribacterium sinus F0268]
Length = 708
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 218/339 (64%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++L+ + + +AAGLLHD ++D +S + F VA LV+
Sbjct: 58 RKSGEPYIIHPLCVAIILSDLEMDKETIAAGLLHDVVEDTGMSLKQVEEMFNPDVAVLVD 117
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QL+ NT ++A+ L MF++MA D R ++IKLADRLHN+ TL+
Sbjct: 118 GVTKLTQLNL-----NTDKVELQAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSP 172
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KR+ A+E+LEI+ PLA+RLGIS K+++++L K+L P+ + +L+ K+ F +
Sbjct: 173 EKRKEKARESLEIYSPLADRLGISKIKIEMDDLSLKYLEPEVYYDLAEKV--HFKREVRE 230
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
I+K+ Q +++ + + GR K +SI+ KM+ + T+D+I+D++ +R+IV+
Sbjct: 231 ERIDKIVQEVREHIEESGIRANIKGRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIVDTV 290
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H+L+ +PG+ KDYI PK N YQSLHT V G+ VP E+QIRT EMH
Sbjct: 291 KDCYAVLGFIHKLYTPIPGRFKDYIAMPKPNMYQSLHTTVIGKDGVPFEIQIRTFEMHRT 350
Query: 298 AEFGFAAHWRYK-EGDCQHSSFVLQM--VEWARWVLTWQ 333
AEFG AAHW+YK EG ++ + +M ++W +L WQ
Sbjct: 351 AEFGIAAHWKYKEEGGSENKATENEMTKMKWLSEILEWQ 389
>gi|226185535|dbj|BAH33639.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus erythropolis PR4]
Length = 809
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 208/340 (61%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + + FG VA LV+
Sbjct: 122 RKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEELTKDFGDEVAHLVD 181
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 182 GVTKLDKV--------VLGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 233
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 234 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEIVRLVADRAPSRDTY 293
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ L I+ +V GR K +SI+ KM+ K D+IHD+ G+R++ E
Sbjct: 294 LAKVRAEINSTLSASRINAIV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCEEVR 352
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH A
Sbjct: 353 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTQDMHRTA 412
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
EFG AAHWRYKE +H+ + ++ + W R +L WQ EA
Sbjct: 413 EFGIAAHWRYKETKGKHAGDIAEVDDMAWMRQLLDWQREA 452
>gi|383821694|ref|ZP_09976930.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium phlei RIVM601174]
gi|383332543|gb|EID11019.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium phlei RIVM601174]
Length = 782
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 212/346 (61%), Gaps = 19/346 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FG+ VA LV
Sbjct: 89 LRKSGDPYITHPLAVAHILAELGMDTTTLIAALLHDTVEDTGYTLEELTAEFGSEVAHLV 148
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ E + + M +AMA DAR ++IK+ADRLHNM T+ LP
Sbjct: 149 DGVTKLDKVA--------LGTAAEGETIRKMIIAMARDARVLVIKVADRLHNMRTMRFLP 200
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+QR A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 201 PEKQQRKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 260
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ Q L+ I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 261 YLAKVRAEIAQTLQASKIN-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEI 319
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 320 RDCYAALGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHKT 379
Query: 298 AEFGFAAHWRYKEGDCQ-------HSSFVLQMVEWARWVLTWQCEA 336
AE G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 380 AELGIAAHWRYKENKGRNGVPNNPHAAAEIDEMAWMRQLLDWQREA 425
>gi|441513494|ref|ZP_20995324.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amicalis NBRC 100051]
gi|441451792|dbj|GAC53285.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amicalis NBRC 100051]
Length = 789
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 203/343 (59%), Gaps = 17/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + R FG VA LV+
Sbjct: 99 RKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQALERDFGPEVAHLVD 158
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 159 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 210
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 211 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 270
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I V GR K +SI+ KM+ K D+IHD+ G+R++ E +
Sbjct: 271 LARVRADINSALSAARIHATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGMRILCEEDR 329
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 330 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTHEMHRTA 389
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
EFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 390 EFGIAAHWRYKENGYRKSGKKSDTTEIDDMAWMRQLLDWQREA 432
>gi|258405012|ref|YP_003197754.1| (p)ppGpp synthetase I SpoT/RelA [Desulfohalobium retbaense DSM
5692]
gi|257797239|gb|ACV68176.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfohalobium retbaense DSM
5692]
Length = 733
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 210/338 (62%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL H +E A +LA + ++ +AAGLLHDTL+D + + FG VA +VE
Sbjct: 39 RLSGEPYLSHPLEVAHILAELRLDAPTIAAGLLHDTLEDTQSNVSDLEEQFGEEVAQIVE 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ T+ + +A+ + M LAMA D R +++KLADRLHNM TL
Sbjct: 99 GVTKIGKV------RFTSKEEAQAENIRKMILAMAEDIRVIIVKLADRLHNMRTLQHQKG 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K++ ++ET+EI+ PLANRLG+ KVQLE++ F++L PD + ++ S + + + +
Sbjct: 153 IKQRLISQETMEIYAPLANRLGLYRVKVQLEDISFQYLRPDVYYQIKSGVEQ--HQTLGQ 210
Query: 181 SAIEK---LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
IE+ L Q++ D+N + GR K LYSI KM ++ L++D++HD+ R+I+++
Sbjct: 211 QYIERVTGLIQSILDENSIPGRVSGRQKHLYSIFHKMQRQGLSLDQVHDLVAFRVILKSV 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L ++H +W VPG+ KDYI+ PK N YQSLHT V G +E+QIRT+EMH
Sbjct: 271 RDCYAVLGLIHSIWKPVPGRFKDYISMPKANMYQSLHTTVIGPDGERIEIQIRTEEMHEI 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YK+G S W R +L WQ E
Sbjct: 331 NEYGIAAHWKYKDG-SNLSERDADRFRWLRQILDWQKE 367
>gi|154482685|ref|ZP_02025133.1| hypothetical protein EUBVEN_00361 [Eubacterium ventriosum ATCC
27560]
gi|149736461|gb|EDM52347.1| RelA/SpoT family protein [Eubacterium ventriosum ATCC 27560]
Length = 759
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 208/339 (61%), Gaps = 17/339 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + TA++LA + + + AGLLHD ++D ++ + + FG V DLV+
Sbjct: 66 RKSGEPYIIHPIHTALILADLELDKESIMAGLLHDVMEDTKVTREQMISEFGEEVTDLVD 125
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+ KL + + K +A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 126 GVTKLT---KLDYDADKVEK--QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMTP 180
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VECF 174
K++ +KET+EI+ P+A+RLGIS K++L++L ++L P+++ +L + E F
Sbjct: 181 EKQKEKSKETMEIYAPIADRLGISKIKIELDDLALRYLEPEKYKDLVDGVHLRLEHREEF 240
Query: 175 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
++ +E+A I GR K +SI+ KM+ + T+D+I+D++ +R+IV
Sbjct: 241 MSQLIAEVAGYIEKAGIKATID-----GRVKHYFSIYKKMVNQHKTLDQIYDVFAIRIIV 295
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +CY AL V+H+ + VPG+ KDYI PK N YQSLHT + G P E+QIRT EM
Sbjct: 296 DTVMECYGALGVIHEKYTPVPGRFKDYIAMPKQNMYQSLHTTLIGPNGQPFEIQIRTMEM 355
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
H AE+G AAHW+YKE Q + W R +L WQ
Sbjct: 356 HKTAEYGIAAHWKYKENITGEGDNEEQKISWLRQILEWQ 394
>gi|394989576|ref|ZP_10382409.1| (p)ppGpp synthetase I SpoT/RelA [Sulfuricella denitrificans skB26]
gi|393791076|dbj|GAB72048.1| (p)ppGpp synthetase I SpoT/RelA [Sulfuricella denitrificans skB26]
Length = 729
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 204/339 (60%), Gaps = 10/339 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H + A +LA ++ + A LLHD ++D ++ I FG VA+LV
Sbjct: 54 FRKSGEPYISHPLAVAEILADWHLDAQTLMAALLHDVVEDTAITKKEIAERFGKAVAELV 113
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GVSKL ++ E T +A+ M LAMA D R +LIK+ADRLHNM TL A+
Sbjct: 114 DGVSKLDKI-----EFQTEIHA-QAENFRKMLLAMARDVRVILIKIADRLHNMRTLGAMA 167
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
KRQR A ETLEI+ P+ANRLG+++ +LE+L F HL P++ L+ K
Sbjct: 168 PEKRQRIANETLEIYAPIANRLGLNSVYDELEDLSFHHLYPNRFEVLAKAVKAARGNRRE 227
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V +E +EQ LKD I + GR K LYSI+ KM K LT E+ DIYG R+IV++
Sbjct: 228 VVGKVLEAIEQKLKDCQIE-ATITGREKHLYSIYKKMQGKSLTFSEVFDIYGFRVIVKDV 286
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY L +HQL+ +PGK KDYI PK NGYQSLHT + G P+E+QIR+++MH
Sbjct: 287 PTCYLTLGSLHQLYKPIPGKFKDYIAIPKANGYQSLHTTLFGPFGTPIEIQIRSQDMHKI 346
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE G A+HW YK GD + + + +W + +L Q E+
Sbjct: 347 AEAGVASHWLYKSGDTEINEMQQKTHQWLQSLLEIQSES 385
>gi|156741205|ref|YP_001431334.1| (p)ppGpp synthetase I SpoT/RelA [Roseiflexus castenholzii DSM
13941]
gi|156232533|gb|ABU57316.1| (p)ppGpp synthetase I, SpoT/RelA [Roseiflexus castenholzii DSM
13941]
Length = 771
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 206/335 (61%), Gaps = 10/335 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +L + ++ VAA LLHD L+D ++ + + FGA +A+LV+
Sbjct: 90 RDSGEPYIDHPVAVAHILIDLQLDAASVAAALLHDVLEDTLVTKEQLIALFGAEIANLVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPL 120
GV+KLS L RE + MF+AMAD R VL+KLADRLHNM T+ +L
Sbjct: 150 GVTKLSALEARTREE------AQVGTYRKMFIAMADDPRVVLVKLADRLHNMRTISSLSE 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
+++R A+ETLEI+ PLA+RLGI K +LE+ F LNP ++ E+S +L D E +
Sbjct: 204 ERQKRMARETLEIYAPLAHRLGIWQIKWELEDRAFAVLNPAKYQEISRQLALRRDARERL 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I++L Q L+ + I + GR K +YSI+ KM +K +++D+I+D +R+IV+
Sbjct: 264 IHRVIQRLRQVLEKEGIKADI-TGRPKHIYSIYRKMERKGVSLDQIYDQLAVRVIVDTVA 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY+ L +VH W VPG+ DYI PK + YQSLHT V G P E+QIRT EMH A
Sbjct: 323 DCYRVLGLVHATWPPVPGEFDDYIAMPKESMYQSLHTTVLIPGGQPCEIQIRTHEMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E G AAHWRYKEG + + + W R ++ W+
Sbjct: 383 ERGIAAHWRYKEGFGRIDASFESKLAWLRGLIEWR 417
>gi|433449313|ref|ZP_20412177.1| GTP pyrophosphokinase [Weissella ceti NC36]
gi|429538827|gb|ELA06865.1| GTP pyrophosphokinase [Weissella ceti NC36]
Length = 741
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 202/315 (64%), Gaps = 9/315 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY++H ++ A +LA + + V AG LHD ++D + + + FGA VA +V
Sbjct: 43 MRQSGEPYIMHPIQVAGILADLNMDPDTVVAGYLHDVIEDTDATLEELTELFGANVAIIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GVSKLS++ +S+ A+ + LAM+ D R +++KLADRLHNM TLDAL
Sbjct: 103 DGVSKLSKIEY------KSSREQLAENHRKLLLAMSKDIRVIIVKLADRLHNMRTLDALK 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAM- 178
K++R A ETLEI+ PLA+RLGI T K +LE+L ++L+PD + +++ K+ E +
Sbjct: 157 PEKQRRIASETLEIYAPLADRLGIMTIKWELEDLSLRYLDPDAYHDIAKKMKMRRQERLN 216
Query: 179 -VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V A++++E + N+ + GR K +YS++ KM+ K ++I D+ +R++V++
Sbjct: 217 FVEEAVDEIENIISSLNLEHTDVYGRPKHIYSVYRKMVDKHKDFEDIFDLSAIRVVVDSM 276
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ Y L ++H W +PG+ KDYI PK NGYQSLHT V G G P+EVQIRT EMH
Sbjct: 277 PETYAVLGMIHSKWTPMPGRFKDYIALPKNNGYQSLHTTVVGPGGRPMEVQIRTHEMHEV 336
Query: 298 AEFGFAAHWRYKEGD 312
AEFG AAHW YKEG+
Sbjct: 337 AEFGVAAHWAYKEGN 351
>gi|57233675|ref|YP_180760.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
gi|57224123|gb|AAW39180.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
Length = 728
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 212/346 (61%), Gaps = 22/346 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+P++ H + A+ LA + +S +AA LLHD +DA +S + I + FGA VA LV
Sbjct: 37 MRKSGEPFIEHPLNVAITLADLQLDSATLAAALLHDVPEDAHISLEQIEKKFGADVAKLV 96
Query: 61 EGVSKLSQLS-----KLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 114
+GV+KLS+L+ + AR + +A+ L M +AM+ D R V IKLADR HNM T
Sbjct: 97 DGVTKLSKLALGPGIEDARRPGGNASLRQAENLRKMLVAMSEDLRVVFIKLADRFHNMRT 156
Query: 115 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKL 170
L AL KR+ AKET+EI+ PLA+RLGI K QLE+L F++L+P + +++ SKL
Sbjct: 157 LQALSAEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKL 216
Query: 171 VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK---KKLTMDEIHDI 227
+ + SAI Q+ +KN + L GR K LYSI+ KM K + ++I+D+
Sbjct: 217 AQRKNYIEHVSAIL---QSEFEKNGLKVELSGRPKHLYSIYQKMEKYASQGKQFEDIYDV 273
Query: 228 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEV 287
LR++V + DCY A+ +VH LW +PG DYI PK NGYQSLHT V G PLEV
Sbjct: 274 LALRVLVNDIPDCYHAIGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSLGTTPLEV 333
Query: 288 QIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF------VLQMVEWAR 327
Q+RT +MH AE+G AAHWRYK + +F + Q++EW R
Sbjct: 334 QVRTYQMHHIAEYGVAAHWRYKTAGKEDVNFEDRIGWLRQLIEWHR 379
>gi|422845570|ref|ZP_16892280.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325684220|gb|EGD26396.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 753
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/320 (45%), Positives = 196/320 (61%), Gaps = 18/320 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D I FGA VA +V+
Sbjct: 44 RASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEEFGADVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + K A+ M +AMA D R +L+KLADRLHNM TL+ L
Sbjct: 104 GVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP E K+V D
Sbjct: 158 DKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYMNP----EAYYKIVSMMDAKRSE 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + AI+ L L I + + GR K +YSI+ KM+ K +EI+D+ +R+IV
Sbjct: 214 REDYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNKHKDFNEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+EM
Sbjct: 273 PTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTEEM 332
Query: 295 HLQAEFGFAAHWRYKEGDCQ 314
H AE+G AAHW YK G+ Q
Sbjct: 333 HKVAEYGVAAHWAYKRGNFQ 352
>gi|27262490|gb|AAN87526.1| GTP pyrophosphokinase [Heliobacillus mobilis]
Length = 734
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 206/338 (60%), Gaps = 10/338 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A +LA + + +AAGLLHD ++D ++ + + + FG VA LV
Sbjct: 40 LRKSGEPYIYHPLAVAFILADLELDMATIAAGLLHDVVEDTPITLEELEKEFGPEVALLV 99
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+L +++ + + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 100 DGVTKLSRLEVRSKQEQ------QVESLRKMFLAMAKDIRVILIKLADRLHNMRTLRHQK 153
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K++ A+ET+E+F PLANRLGIS K +LE+L ++L P+ + +L ++ E
Sbjct: 154 PEKQREIAEETIELFAPLANRLGISRIKWELEDLSLRYLEPETYYDLVQRIATKRAEREE 213
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L + L+ + + GR K YSI+ KM +K + EI+D+ +R++V++
Sbjct: 214 RINDIIRELSEKLEAVGVKADI-SGRPKHFYSIYRKMTNQKKDLSEIYDLIAVRVLVDSV 272
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL ++H +W +P + KDYI PK N YQSLHT + G P EVQIRT EMH
Sbjct: 273 KDCYGALGIIHTIWKPIPMRFKDYIATPKTNMYQSLHTTLVGPMGEPFEVQIRTFEMHRT 332
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG + + + W R + WQ E
Sbjct: 333 AEYGIAAHWKYKEGGKSQGTGFEEKLAWLRQLQEWQSE 370
>gi|317471454|ref|ZP_07930806.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
gi|316901069|gb|EFV23031.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
Length = 904
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 214/339 (63%), Gaps = 16/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D ++Y+ + R FG VA LV+
Sbjct: 210 RKSGEPYIIHPICVAIILAELELDRETIIAGLLHDVVEDTDVTYEDVVREFGVEVAQLVD 269
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS + V+A+ L MFLAMA D R +LIKLADRLHNM T+ +
Sbjct: 270 GVTKLGQLSY-----SKDKIEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMKP 324
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD + EL L + EA
Sbjct: 325 EKQKEKSRETMDIYAPIAHRLGISKIKVELDDLSLRYLKPDVYKELEHSLDSQKVRREAY 384
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++++ ++ I + GR K +SI+ KM+ + T+D+I+D++ +R+ V+ +
Sbjct: 385 IKEIVDEVSGHIERSGIKAEI-DGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIKVDTVK 443
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 444 DCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPEGHPFEIQIRTFEMHRIA 503
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 333
E+G AAHW+YKE + SS + E W R +L WQ
Sbjct: 504 EYGIAAHWKYKE---KSSSVGVNKEEEKLSWLREILEWQ 539
>gi|429221371|ref|YP_007183015.1| RelA/SpoT family (p)ppGpp synthetase [Deinococcus peraridilitoris
DSM 19664]
gi|429132234|gb|AFZ69249.1| (p)ppGpp synthetase, RelA/SpoT family [Deinococcus peraridilitoris
DSM 19664]
Length = 746
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 211/338 (62%), Gaps = 31/338 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +LA +G ++ V AGLLHDT++D ++++ + + FG V +V
Sbjct: 30 LRKSGEPYITHPVTVAQILADLGMDTDGVIAGLLHDTVEDTDVTFEQVEQDFGVVVRRIV 89
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVLIKLADRLHNMMTLDALP 119
EG +K+S+L+K++ +N + +++ L M +AM D R +++KLADRLHNM TL ++P
Sbjct: 90 EGETKVSKLTKMS--SNLHDE--QSENLRQMLIAMTGDIRVIIVKLADRLHNMRTLASMP 145
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+QR A+ETLEIF PLA+RLGI K +LE+L FK+L+PD + L +L + E
Sbjct: 146 AHKQQRIARETLEIFAPLAHRLGIGQIKWELEDLSFKYLDPDAYESLERRLRTRQSERER 205
Query: 178 MVTSAIEKLEQALKDKN-----ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
+ A+E+L L++ ++ + GR K LYSIH KM K+ ++++I D+ +R+
Sbjct: 206 HIVGALEQLRATLEEDVELPEWVASTDITGRGKHLYSIHNKMRKEGKSLEQIFDLLAVRV 265
Query: 233 IV-------------ENEED------CYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSL 273
I+ E ED CY AL +VH +W +PG+ KDYI PK NGYQSL
Sbjct: 266 ILRPKPVEAPPGKAKERAEDAREKRVCYHALGLVHSMWTPIPGRFKDYIAVPKPNGYQSL 325
Query: 274 HTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 311
HT V P+EVQIR++ MH AEFG AAHW YK+G
Sbjct: 326 HTTVISTAGQPIEVQIRSQRMHEVAEFGIAAHWMYKQG 363
>gi|313150268|dbj|BAJ39892.1| ppGpp synthetase [Actinoplanes teichomyceticus]
Length = 821
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 152/345 (44%), Positives = 209/345 (60%), Gaps = 23/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + FGA VA LV+
Sbjct: 133 RKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQMRNDFGAEVALLVD 192
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 193 GVTKLDRV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPR 244
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E++ + E EA+
Sbjct: 245 PKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREAL 304
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +++ LK I V GR K LYSI+ KM+ + ++I+D+ G+R++V+
Sbjct: 305 LRQVTNRVQLDLKSAKIKAEV-TGRPKHLYSIYQKMIVRGRDFNDIYDLVGVRILVDTVR 363
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH A
Sbjct: 364 DCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTFAMHRTA 423
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 424 EFGIAAHWKYKEQKGATIVGPPAH----IDEMTWLRQLLDWQREA 464
>gi|339445999|ref|YP_004712003.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Eggerthella sp. YY7918]
gi|338905751|dbj|BAK45602.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Eggerthella sp. YY7918]
Length = 791
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 209/337 (62%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H VE A++LA + + + A LLHDT++D ++ + + R F +A LVE
Sbjct: 90 RKSGEPFVAHPVEVAIILADLRMDVETLVASLLHDTVEDTSVTREDVEREFSPEIAQLVE 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K++++ + + A+ + M +AM+ D R ++IKLADRLHNM TL AL
Sbjct: 150 GVTKITRIEVESLSDEQAAT------IRKMLVAMSKDIRVIVIKLADRLHNMRTLGALRE 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 178
+R ++ETLEI+ P+A+RLGI+ K +LE+L F +L P++ ++S + E E
Sbjct: 204 DRRIFKSRETLEIYAPIAHRLGINNIKWELEDLSFFYLEPNKFKQVSRMVTESRAEREGY 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IE L ++ I ++ GR K LYSI+ KM KK EI+D+ +R+IV++ +
Sbjct: 264 LDQIIEILHGEMEKVGIQAQIM-GRPKHLYSIYQKMTKKGKGFSEIYDLIAVRIIVKSVK 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VH LW +PG+ KDYI PKFN YQSLHT V G PLEVQIRT++MH +
Sbjct: 323 DCYSALGAVHTLWHPMPGRFKDYIAMPKFNMYQSLHTTVIGPAGRPLEVQIRTEDMHRTS 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKE + + Q + W R ++ WQ E
Sbjct: 383 EYGVAAHWRYKEKGGKGGDELDQQLAWLRQMIDWQSE 419
>gi|317508687|ref|ZP_07966342.1| RelA/SpoT family protein [Segniliparus rugosus ATCC BAA-974]
gi|316253008|gb|EFV12423.1| RelA/SpoT family protein [Segniliparus rugosus ATCC BAA-974]
Length = 797
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 211/342 (61%), Gaps = 16/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++ + A LLHDT++D S + + R FG+ VA +V
Sbjct: 108 FRRSGDPYITHPLAVAHILAELGMDTLSLVAALLHDTVEDTGYSLEELERDFGSDVAHIV 167
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ T EA+ + M +AMA D R ++IK+ADRLHNM T+ +P
Sbjct: 168 DGVTKLDKV--------TWGAGAEAETIRKMVIAMARDPRVLVIKVADRLHNMRTMRFMP 219
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
K+ R A+ETLE+ PLA+RLG+++ K +LE+L F L+P ++ E+ +LV +
Sbjct: 220 PEKQVRKAQETLEVIAPLAHRLGMASVKWELEDLAFAVLHPKKYAEIV-RLVADRAPSRD 278
Query: 180 TSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
T + +++ L+ SF V + GR K +SI+ KM+ K D+IHD+ GLR++
Sbjct: 279 TY-LARVKGELQSALSSFRVDAKVAGRPKHYWSIYQKMIVKGRDFDDIHDLVGLRVVCGE 337
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY A+ VVH LW +PG+ KDYI +P++ YQSLHT V G PLEVQ+RTKEMH
Sbjct: 338 VRDCYAAVGVVHSLWQPLPGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQLRTKEMHR 397
Query: 297 QAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE G S + + W R +L WQ EA
Sbjct: 398 VAEFGIAAHWRYKENKGKVGSDSAEVDRMAWMRQLLDWQREA 439
>gi|145594359|ref|YP_001158656.1| RelA/SpoT family protein [Salinispora tropica CNB-440]
gi|145303696|gb|ABP54278.1| RelA/SpoT family protein [Salinispora tropica CNB-440]
Length = 815
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/345 (44%), Positives = 208/345 (60%), Gaps = 23/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D + FG VA LV+
Sbjct: 127 RKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRADFGGEVALLVD 186
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 187 GVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLIFLPR 238
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E++ + E EA+
Sbjct: 239 PKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREAL 298
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ K+ LK I V GR K LYSI+ KM+ + ++I+D+ G+R++V+
Sbjct: 299 LRQVTRKVGTDLKSAKIRAEV-TGRPKHLYSIYQKMIVRGRDFNDIYDLVGVRILVDTVR 357
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH A
Sbjct: 358 DCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTYAMHRTA 417
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 418 EFGIAAHWKYKEHKGTQIVGPPAH----IDEMTWLRQLLDWQREA 458
>gi|409390045|ref|ZP_11241816.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Gordonia rubripertincta NBRC
101908]
gi|403199872|dbj|GAB85050.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Gordonia rubripertincta NBRC
101908]
Length = 784
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 203/343 (59%), Gaps = 17/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + R FG VA LV+
Sbjct: 94 RKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQALERDFGQEVAHLVD 153
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 154 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 205
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 206 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 265
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I V GR K +SI+ KM+ K D+IHD+ G+R++ E +
Sbjct: 266 LARVRADINNALSAARIQATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGMRILCEEDR 324
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 325 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTHEMHRTA 384
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
EFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 385 EFGIAAHWRYKESGYRKSGKKSDTAEIDDMAWMRQLLDWQREA 427
>gi|323485946|ref|ZP_08091279.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
WAL-14163]
gi|323693057|ref|ZP_08107277.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
WAL-14673]
gi|355621474|ref|ZP_09046124.1| hypothetical protein HMPREF1020_00203 [Clostridium sp. 7_3_54FAA]
gi|323400736|gb|EGA93101.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
WAL-14163]
gi|323502938|gb|EGB18780.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
WAL-14673]
gi|354823569|gb|EHF07899.1| hypothetical protein HMPREF1020_00203 [Clostridium sp. 7_3_54FAA]
Length = 761
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 213/337 (63%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AG+LHD ++D ++ + + FG VA LV+
Sbjct: 62 RRSGEPYIIHPLCVAIILADLELDKETIVAGILHDVVEDTVMTEEELTSIFGEEVALLVD 121
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+Q+S + ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 122 GVTKLTQISW-----SMDKVEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKP 176
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A+ET++I+ P+A+RLGIS K +L++L K+L P+ + EL+ K+ D EA
Sbjct: 177 EKQKEKARETMDIYAPIADRLGISKIKTELDDLSLKYLEPEVYYELAEKVALRKDAREAF 236
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + +++ ++D I V GR K +SI+ KM+ + T+++I+D++ +R++VE +
Sbjct: 237 VQGIVFEVKSHMEDAGIEAKV-DGRVKHFFSIYKKMVNQDKTLEQIYDLFAVRIVVETVK 295
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+L+ +PG+ KDYI PK N YQSLHT + P E+QIRT EMH A
Sbjct: 296 DCYAALGVIHELYKPIPGRFKDYIAMPKPNMYQSLHTTLISSSGQPFEIQIRTFEMHRTA 355
Query: 299 EFGFAAHWRYKEGDCQHSSF--VLQMVEWARWVLTWQ 333
E+G AAHW+YKE S+ + W R +L WQ
Sbjct: 356 EYGIAAHWKYKESGSSKSATDSAEAKLSWLRQILEWQ 392
>gi|311031524|ref|ZP_07709614.1| GTP pyrophosphokinase [Bacillus sp. m3-13]
Length = 732
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 208/341 (60%), Gaps = 11/341 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +AAG LHD ++D ++ + I F A VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLDLDPSTIAAGFLHDVVEDTSVTLEEIKEAFNAEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ + ++ L++ I+ L GR K +YSI+ KM K+ EI+D+ +R+IV + +
Sbjct: 218 ISEVMNEVNDRLEEVEIT-AELSGRPKHIYSIYRKMAKQNKQFSEIYDLLAVRIIVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTSDMHQIA 336
Query: 299 EFGFAAHWRYKEG-DCQHSSFVLQMVEWARWVLTWQCEAMS 338
E+G AAHW YKE + + + + W R +L WQ +A +
Sbjct: 337 EYGIAAHWAYKEDKEADDRASFEEKLTWFREILEWQNDATN 377
>gi|296139654|ref|YP_003646897.1| (p)ppGpp synthetase I SpoT/RelA [Tsukamurella paurometabola DSM
20162]
gi|296027788|gb|ADG78558.1| (p)ppGpp synthetase I, SpoT/RelA [Tsukamurella paurometabola DSM
20162]
Length = 779
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 147/344 (42%), Positives = 207/344 (60%), Gaps = 17/344 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SGDPY+ H + A +LA +G ++T + A LLHDT++D S D + FG+ VA LV
Sbjct: 88 MRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLDQLTAEFGSEVAHLV 147
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 148 DGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 199
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R AKETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 200 PEKQARKAKETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEIVRLVADRAPSRDT 259
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ S ++ AL I V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 260 YLASVRAEINGALTASRIVADV-QGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEV 318
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 319 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTRDMHRT 378
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
AEFG AAHWRYKE + + E W R +L WQ EA
Sbjct: 379 AEFGIAAHWRYKETKGKGGKGGSDLSEVDDMAWMRQLLDWQREA 422
>gi|315303282|ref|ZP_07873919.1| GTP diphosphokinase [Listeria ivanovii FSL F6-596]
gi|313628349|gb|EFR96845.1| GTP diphosphokinase [Listeria ivanovii FSL F6-596]
Length = 738
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEAFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLNDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMTEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDY+ PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYVAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|428779441|ref|YP_007171227.1| RelA/SpoT family (p)ppGpp synthetase [Dactylococcopsis salina PCC
8305]
gi|428693720|gb|AFZ49870.1| (p)ppGpp synthetase, RelA/SpoT family [Dactylococcopsis salina PCC
8305]
Length = 762
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 204/339 (60%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A L+ +G S ++ AG LHD ++D ++ + I FG V LVE
Sbjct: 64 RRSGEPYIAHPVAVAGLIRDLGGGSAMIGAGFLHDIVEDTEVTCEEIEERFGESVRHLVE 123
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N +SKT +A+ MFLAMA D R +++KLADRLHNM TL L
Sbjct: 124 GVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLQHLK 176
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+++ A ET EIF PLANRLGI ++K +LE+L FK+L P+ E+ + + E
Sbjct: 177 PEKQKQIALETREIFAPLANRLGIGSFKWELEDLSFKYLEPEAFQEIRELVADRRTDREK 236
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + E L++ I L GR K LY I+ KM +++ T EI+D+ G+R+I++
Sbjct: 237 RIQTVTEALQKRFDQGGIEVEELKGRPKHLYGIYQKMQQQQKTFAEIYDLAGVRVILKTR 296
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
EDCY+AL ++H + +PG+ KDYI PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 297 EDCYRALAIIHDEFKPIPGRFKDYIGLPKPNRYQSLHTTVIGGYGKPIEMQIRTLEMHYI 356
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQ 333
AE+G AAHW YKE G F + W R +L WQ
Sbjct: 357 AEYGIAAHWLYKETGGTSDFKFTAEDEKFTWLRQLLEWQ 395
>gi|350569311|ref|ZP_08937707.1| GTP diphosphokinase [Propionibacterium avidum ATCC 25577]
gi|348660129|gb|EGY76839.1| GTP diphosphokinase [Propionibacterium avidum ATCC 25577]
Length = 773
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 205/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D +++ + FG VA LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDEQTLCAGLLHDTVEDTSYTHEQLTADFGEEVALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++ +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGESAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAEQAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKEVIAIVRQDLDEAGIEATVY-GRPKHYYSIYQKMVVRGRDFSDIYDLIGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGKGIQPDGTDLSWVQSLNQWSK 417
>gi|363889992|ref|ZP_09317340.1| hypothetical protein HMPREF9628_01782 [Eubacteriaceae bacterium
CM5]
gi|361966090|gb|EHL19031.1| hypothetical protein HMPREF9628_01782 [Eubacteriaceae bacterium
CM5]
Length = 733
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 213/341 (62%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H +E A +LA + + +AAGL+HD ++D + + + FGA +A LV
Sbjct: 36 VRRSGEKYIMHPIEVAGILAELELDVATIAAGLMHDVVEDTDTTNEQMINMFGAEIATLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E N + + L MF+AMA D R VLIKLADRLHNM TL +
Sbjct: 96 DGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVLIKLADRLHNMRTLKFMT 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K + +KET+EIF P+A RLGIS K ++E++ ++L PD + ++ K+ + +
Sbjct: 150 PRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPDFYFDMERKISRRITQRDS 209
Query: 178 MVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I KL++ ++ + NI + GR K++YSI+ KM K + +EI+D +R++V+
Sbjct: 210 YINGIISKLKEKIQVEANIP-CEIYGREKNMYSIYKKMKFKNKSFEEIYDFIAVRVVVKE 268
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY + +VH +W +P + KDYI PK N YQS+HT + G P+E+QIRT+EMH
Sbjct: 269 LKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMYQSIHTTIFGPDGEPVEIQIRTEEMHK 328
Query: 297 QAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YKEG + S + + + W R ++ WQ E
Sbjct: 329 TAEYGIAAHWKYKEGRIDTNESDMDKKLAWLRQIMDWQKEV 369
>gi|374709317|ref|ZP_09713751.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus inulinus CASD]
Length = 724
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 212/340 (62%), Gaps = 11/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H +E A +L + + T + +G LHD ++D ++ D I FG VA+LV
Sbjct: 37 VRKSGEPYIIHPIEVAGILVQLNMDVTTIVSGFLHDVVEDTRVTLDDIRVKFGDNVAELV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++E+ +A+ MF+AMA D R V++KLADRLHNM TL +
Sbjct: 97 DGVTKLRNFEYTSKEDQ------QAENHRKMFVAMARDLRCVIVKLADRLHNMRTLKYMR 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K+ + A ETLEI+ PLANRLGIS K +LE++ ++L P Q+ ++ + + + +E A
Sbjct: 151 HEKQIQKANETLEIYAPLANRLGISAIKWELEDISLRYLKPQQYYKIVNLMKQKREEREA 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +E L+ +K +I V GR K +YSI+ KM+ + +EI+D++ +R+IV+
Sbjct: 211 YIAKVVEDLKAYVKSVHIPAEV-SGRPKHIYSIYRKMVNQHKQFNEIYDLFAVRIIVKTI 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT+EMH
Sbjct: 270 KDCYAILGIIHTHWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTEEMHDV 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
AE+G AAHW YKEG ++ + + + W R +L +Q E
Sbjct: 330 AEYGIAAHWAYKEGKVKNINNKFEDRLTWFREILEYQNET 369
>gi|363894837|ref|ZP_09321896.1| hypothetical protein HMPREF9629_02165 [Eubacteriaceae bacterium
ACC19a]
gi|361961297|gb|EHL14508.1| hypothetical protein HMPREF9629_02165 [Eubacteriaceae bacterium
ACC19a]
Length = 733
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 213/341 (62%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H +E A +LA + + +AAGL+HD ++D + + + FGA +A LV
Sbjct: 36 VRRSGEKYIMHPIEVAGILAELELDVATIAAGLMHDVVEDTDTTNEQMINMFGAEIATLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E N + + L MF+AMA D R VLIKLADRLHNM TL +
Sbjct: 96 DGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVLIKLADRLHNMRTLKFMT 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K + +KET+EIF P+A RLGIS K ++E++ ++L PD + ++ K+ + +
Sbjct: 150 PRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPDFYFDMERKISRRITQRDS 209
Query: 178 MVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I KL++ ++ + NI + GR K++YSI+ KM K + +EI+D +R++V+
Sbjct: 210 YINGIISKLKEKIQVEANIP-CEIYGREKNMYSIYKKMKFKNKSFEEIYDFIAVRVVVKE 268
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY + +VH +W +P + KDYI PK N YQS+HT + G P+E+QIRT+EMH
Sbjct: 269 LKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMYQSIHTTIFGPDGEPVEIQIRTEEMHK 328
Query: 297 QAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YKEG + S + + + W R ++ WQ E
Sbjct: 329 TAEYGIAAHWKYKEGRIDTNESDMDKKLAWLRQIMDWQKEV 369
>gi|315282436|ref|ZP_07870851.1| GTP diphosphokinase [Listeria marthii FSL S4-120]
gi|313613919|gb|EFR87648.1| GTP diphosphokinase [Listeria marthii FSL S4-120]
Length = 738
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|153004178|ref|YP_001378503.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
gi|152027751|gb|ABS25519.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
Length = 738
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 149/342 (43%), Positives = 205/342 (59%), Gaps = 21/342 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL+H +E A LLA + + V GLLHDT++D + + I FG +A+LV
Sbjct: 52 IRKSGEPYLIHPLEVAGLLAELKLDEASVVTGLLHDTIEDTLATKEEIAELFGPEIAELV 111
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLSQ S NT + +A+ M +AMA D R +L+KLADR HNM TLD +
Sbjct: 112 DGVTKLSQFSAA----NTQEEK-QAENFRKMVVAMAKDIRVLLVKLADRTHNMRTLDHMK 166
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA-- 177
++R A+ETL+I+ PLANRLGI K +LE+L FK+L P + ELS+++ E
Sbjct: 167 PESQERIARETLDIYAPLANRLGIQWLKSELEDLSFKYLRPQDYVELSTRVEAEQKEKGE 226
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V ++ + L I+ V GR K +YSI KM + + D+I D+ G R+IV++
Sbjct: 227 FVEEVVDLIRTRLTGAGINAQV-SGRVKHVYSIWRKMRQLDVDFDQIQDVIGFRVIVDSV 285
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY++L ++H LW VPG+ KDYI PK N YQSLHT V G +EVQIRTKEMH
Sbjct: 286 AECYESLGIIHSLWKPVPGRFKDYIAIPKPNLYQSLHTTVVGPRGERIEVQIRTKEMHRI 345
Query: 298 AEFGFAAHWRYKE------------GDCQHSSFVLQMVEWAR 327
AE G AAHW YKE D + ++ Q+VEW R
Sbjct: 346 AEEGVAAHWAYKEKGRDGKGAELSKKDAESFGWLRQLVEWQR 387
>gi|363420442|ref|ZP_09308534.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus pyridinivorans AK37]
gi|359735684|gb|EHK84641.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus pyridinivorans AK37]
Length = 770
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 208/341 (60%), Gaps = 16/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FG VA LV+
Sbjct: 83 RKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYTLEQLTAEFGEEVAHLVD 142
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 143 GVTKLDKV--------VLGSAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 194
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC---FDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ +LV +
Sbjct: 195 EKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEIV-RLVATRAPSRDT 253
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +++ + L I V+ GR K +SI+ KM+ K D+IHD+ G+R++
Sbjct: 254 YLATVRDEIGRTLSASRID-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCNEI 312
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT EMH
Sbjct: 313 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTHEMHRT 372
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
AEFG AAHWRYKE +HS V ++ + W R +L WQ EA
Sbjct: 373 AEFGIAAHWRYKETKGRHSGDVAELDDMAWMRQLLDWQREA 413
>gi|363892830|ref|ZP_09319981.1| RelA/SpoT family protein [Eubacteriaceae bacterium CM2]
gi|361962457|gb|EHL15582.1| RelA/SpoT family protein [Eubacteriaceae bacterium CM2]
Length = 733
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 232/406 (57%), Gaps = 37/406 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H V+ A +LA + + +AAGL+HD ++D + + + FG +A LV
Sbjct: 36 VRRSGEAYIVHPVQVAGILAELELDVATIAAGLMHDVVEDTDTTNEQMINMFGVEIATLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E N + + L MF+AMA D R VLIKLADRLHNM TL +P
Sbjct: 96 DGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVLIKLADRLHNMRTLKFMP 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K + +KET+EIF P+A RLGIS K ++E++ ++L P+ + ++ K+ + +
Sbjct: 150 PRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPEFYFDMERKISRRITQRDS 209
Query: 178 MVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I KL++ ++ + NI + GR K++YSI+ KM K + +EI+D +R++V+
Sbjct: 210 YINGIISKLKEKIQVEANIP-CEIYGREKNMYSIYKKMKFKNKSFEEIYDFIAVRVVVKE 268
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY + +VH +W +P + KDYI PK N YQS+HT + G P+E+QIRT+EMH
Sbjct: 269 LKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMYQSIHTTIFGPDGEPVEIQIRTEEMHK 328
Query: 297 QAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCT 355
AE+G AAHW+YKEG + S + + + W R ++ WQ E + P
Sbjct: 329 TAEYGIAAHWKYKEGRIDTNESDMDKKLAWLRQIMDWQKE--------------VSDPTE 374
Query: 356 FPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
F F+ VFV + D V E PT ST +DL
Sbjct: 375 FMESLKIDLFA--------NQVFVFTPKGD---VIELPTDSTPIDL 409
>gi|300781066|ref|ZP_07090920.1| GTP diphosphokinase [Corynebacterium genitalium ATCC 33030]
gi|300532773|gb|EFK53834.1| GTP diphosphokinase [Corynebacterium genitalium ATCC 33030]
Length = 759
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 207/341 (60%), Gaps = 16/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A + A IG ++T V A LLHDT++D S + FG VA LV+
Sbjct: 72 RKSGDPYITHPLAVATICAEIGMDTTTVVAALLHDTVEDTDYSLADLTEDFGPEVARLVD 131
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 132 GVTKLDKVA--------FGSAAEAETVRKMVVAMAQDPRVLVIKVADRLHNMRTMRFLPP 183
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE---CFDEA 177
K+Q+ A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + E D A
Sbjct: 184 EKQQKKARETLEVIAPLAHRLGMATVKWELEDLAFAILYPKKYEEIVRLVAERAPSRDRA 243
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E ++ LK + V+ GR K +SI+ KM+ + +EI D+ G+R++V+N
Sbjct: 244 LKEITAE-IQTELKTNGVKADVM-GRPKHYWSIYQKMVVRGRDFNEIFDLVGIRILVDNV 301
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH +++ +PG+ KDYI+ P+F YQSLHT V + PLE+Q+RT EMH
Sbjct: 302 SDCYAAIGVVHSMYSAMPGRFKDYISNPRFGVYQSLHTTVMNDSGRPLEIQVRTHEMHYN 361
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE H L + W R +L WQ EA
Sbjct: 362 AEFGVAAHWRYKETKGSHKGDQAELDQMTWMRQLLDWQKEA 402
>gi|217964330|ref|YP_002350008.1| GTP pyrophosphokinase [Listeria monocytogenes HCC23]
gi|290893882|ref|ZP_06556860.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J2-071]
gi|386008294|ref|YP_005926572.1| GTP pyrophosphokinase [Listeria monocytogenes L99]
gi|386026896|ref|YP_005947672.1| putative (p)ppGpp synthetase [Listeria monocytogenes M7]
gi|404407961|ref|YP_006690676.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2376]
gi|217333600|gb|ACK39394.1| GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Listeria
monocytogenes HCC23]
gi|290556599|gb|EFD90135.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J2-071]
gi|307571104|emb|CAR84283.1| GTP pyrophosphokinase [Listeria monocytogenes L99]
gi|336023477|gb|AEH92614.1| putative (p)ppGpp synthetase [Listeria monocytogenes M7]
gi|404242110|emb|CBY63510.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2376]
Length = 738
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|295106146|emb|CBL03689.1| (p)ppGpp synthetase, RelA/SpoT family [Gordonibacter pamelaeae
7-10-1-b]
Length = 802
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 210/337 (62%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H VE A++LA + + + A LLHDT++D ++ + + F VA LVE
Sbjct: 96 RKSGEPFVAHPVEVAIILADLRMDVETLCAALLHDTVEDTCVTTEQVAVEFNEQVAQLVE 155
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K++++ + + A+ + MF+AM+ D R ++IKLADRLHNM TL AL
Sbjct: 156 GVTKITRIEVESLSDEQAAT------IRKMFVAMSKDIRVIVIKLADRLHNMRTLGALRE 209
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 178
+R A+ETLEI+ P+A+RLGI+ K +LE+L F +L P+++ ++S + E E
Sbjct: 210 DRRIFKARETLEIYAPIAHRLGINNIKWELEDLSFYYLEPNKYKQVSRMVTESRAEREGY 269
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L ++ I+ ++ GR K LYSI+ KM +K EI+D+ +R+IV + +
Sbjct: 270 LDQIIGILHDEMEKVGITAQIM-GRPKHLYSIYQKMTQKGKGFSEIYDLIAVRIIVPSVK 328
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VH LW +PG+ KDYI PK+N YQSLHT V G PLEVQIRT++MH Q+
Sbjct: 329 DCYLALGAVHTLWHPMPGRFKDYIAMPKYNMYQSLHTTVIGPAGRPLEVQIRTEDMHRQS 388
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKE + + Q + W R ++ WQ E
Sbjct: 389 EYGVAAHWRYKEKGGKSGDAIDQQLAWLRQMVDWQDE 425
>gi|417837430|ref|ZP_12483668.1| GTP pyrophosphokinase , ppGpp synthetase I [Lactobacillus johnsonii
pf01]
gi|338760973|gb|EGP12242.1| GTP pyrophosphokinase , ppGpp synthetase I [Lactobacillus johnsonii
pf01]
Length = 749
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 196/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA + + VAAG LHDT++D ++ D I FG VA +V
Sbjct: 43 FRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVTNDDIKEKFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 DGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSER-- 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + AI L+Q L I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHKDFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+ MH
Sbjct: 276 SVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPGGKPLEIQIRTEAMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QVAEYGVAAHWAYKEG 351
>gi|319947807|ref|ZP_08022001.1| GTP diphosphokinase [Dietzia cinnamea P4]
gi|319438531|gb|EFV93457.1| GTP diphosphokinase [Dietzia cinnamea P4]
Length = 788
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 210/340 (61%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A + A +G ++T + A LLHDT++D S + + +G VA LV+
Sbjct: 100 RKSGDPYITHPLAVATICAEMGMDTTTLVAALLHDTVEDTDYSLEQLEADYGGEVAHLVD 159
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 160 GVTKLDKVD--------FGEAAEAETIRKMIIAMAHDPRVLVIKVADRLHNMRTMRFLPP 211
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ + A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 212 EKQVKKARETLEVIAPLAHRLGMATVKWELEDLAFAILEPKKYQEIVRLVADRAPSRDVY 271
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + I +++ L+ NI V GR K +SI+ KM+ + DEIHD+ G+R++ ++
Sbjct: 272 LNTVINRVKADLEKANIQARV-EGRPKHYWSIYQKMIVRGREFDEIHDLVGIRVLCDDVR 330
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH W +PG+ KDYI +P+F Y+SLHT V G PLE+QIRT EMH A
Sbjct: 331 DCYAAIGVVHSTWKPMPGRFKDYIAQPRFGVYRSLHTTVIGPDGKPLEIQIRTHEMHRNA 390
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE +H+ ++ E W R +L+WQ EA
Sbjct: 391 EYGIAAHWRYKETRGKHNGDPAEVDEMAWMRQLLSWQREA 430
>gi|254994034|ref|ZP_05276224.1| (p)ppGpp synthetase [Listeria monocytogenes FSL J2-064]
Length = 711
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|42519264|ref|NP_965194.1| GTP pyrophosphokinase [Lactobacillus johnsonii NCC 533]
gi|385825782|ref|YP_005862124.1| GTP pyrophosphokinase [Lactobacillus johnsonii DPC 6026]
gi|41583552|gb|AAS09160.1| GTP pyrophosphokinase [Lactobacillus johnsonii NCC 533]
gi|329667226|gb|AEB93174.1| GTP pyrophosphokinase [Lactobacillus johnsonii DPC 6026]
Length = 749
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 196/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA + + VAAG LHDT++D ++ D I FG VA +V
Sbjct: 43 FRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVTNDDIKEKFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 DGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSER-- 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + AI L+Q L I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHKDFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+ MH
Sbjct: 276 SVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPGGKPLEIQIRTEAMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QVAEYGVAAHWAYKEG 351
>gi|402837147|ref|ZP_10885675.1| GTP diphosphokinase [Eubacteriaceae bacterium OBRC8]
gi|402275627|gb|EJU24772.1| GTP diphosphokinase [Eubacteriaceae bacterium OBRC8]
Length = 733
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 232/406 (57%), Gaps = 37/406 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H V+ A +LA + + +AAGL+HD ++D + + + FG +A LV
Sbjct: 36 VRRSGEAYIVHPVQVAGILAELELDVATIAAGLMHDVVEDTDTTNEQMINMFGVEIATLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E N + + L MF+AMA D R VLIKLADRLHNM TL +P
Sbjct: 96 DGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVLIKLADRLHNMRTLKFMP 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K + +KET+EIF P+A RLGIS K ++E++ ++L P+ + ++ K+ + +
Sbjct: 150 PRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPEFYFDMERKISRRITQRDS 209
Query: 178 MVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I KL++ ++ + NI + GR K++YSI+ KM K + +EI+D +R++V+
Sbjct: 210 YINGIISKLKEKIQVEANIP-CEIYGREKNMYSIYKKMKFKNKSFEEIYDFIAVRVVVKE 268
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY + +VH +W +P + KDYI PK N YQS+HT + G P+E+QIRT+EMH
Sbjct: 269 LKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMYQSIHTTIFGPDGEPVEIQIRTEEMHK 328
Query: 297 QAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCT 355
AE+G AAHW+YKEG + S + + + W R ++ WQ E + P
Sbjct: 329 TAEYGIAAHWKYKEGRIDTNESDMDKKLAWLRQIMDWQKE--------------VSDPTE 374
Query: 356 FPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
F F+ VFV + D V E PT ST +DL
Sbjct: 375 FMESLKIDLFA--------NQVFVFTPKGD---VIELPTDSTPIDL 409
>gi|401679361|ref|ZP_10811292.1| GTP diphosphokinase [Veillonella sp. ACP1]
gi|400219582|gb|EJO50446.1| GTP diphosphokinase [Veillonella sp. ACP1]
Length = 746
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 205/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A +LA + + + A LLHD ++D + + I + FG+ VA LV
Sbjct: 57 FRASGEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGSEVAFLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 117 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMR 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E
Sbjct: 171 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQARED 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V +E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+
Sbjct: 231 IVNDTMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTV 289
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H +W +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 290 PDCYAVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 349
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 350 SEYGVAAHWRYKEGNKGADKEFDQKVAWLRQVLEWQ 385
>gi|383781444|ref|YP_005466011.1| putative ppGpp synthetase [Actinoplanes missouriensis 431]
gi|381374677|dbj|BAL91495.1| putative ppGpp synthetase [Actinoplanes missouriensis 431]
Length = 830
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 207/345 (60%), Gaps = 23/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + FGA VA LV+
Sbjct: 142 RKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQMRNDFGAEVALLVD 201
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 202 GVTKLDRV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPR 253
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E++ + E EA+
Sbjct: 254 AKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREAL 313
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ LK I GR K LYSI+ KM+ + ++I+D+ G+R++V+
Sbjct: 314 LRQVTNRVSLDLKSAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDIYDLVGVRILVDTVR 372
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH A
Sbjct: 373 DCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTFAMHRTA 432
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 433 EFGIAAHWKYKEQKGATIVGPPAH----IDEMTWLRQLLDWQREA 473
>gi|303230780|ref|ZP_07317527.1| GTP diphosphokinase [Veillonella atypica ACS-049-V-Sch6]
gi|302514540|gb|EFL56535.1| GTP diphosphokinase [Veillonella atypica ACS-049-V-Sch6]
Length = 746
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 205/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A +LA + + + A LLHD ++D + + I + FG+ VA LV
Sbjct: 57 FRASGEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGSEVAFLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 117 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMR 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E
Sbjct: 171 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQARED 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V +E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+
Sbjct: 231 IVNDTMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTV 289
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H +W +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 290 PDCYAVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 349
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 350 SEYGVAAHWRYKEGNKGADKEFDQKVAWLRQVLEWQ 385
>gi|326791627|ref|YP_004309448.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium lentocellum DSM 5427]
gi|326542391|gb|ADZ84250.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium lentocellum DSM 5427]
Length = 743
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 225/386 (58%), Gaps = 21/386 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H +E A LA + + + AGLLHD ++D + + I R F VA LV
Sbjct: 40 LRKSGEPYIIHPLEVACNLADLELDIESIVAGLLHDVVEDTDYTLEDIERLFNKEVALLV 99
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ A+ + ++A+ MFLAMA D R VLIKLADRLHNM TL +
Sbjct: 100 DGVTKLGKIQYSAQNKQLQKEEIQAENYRKMFLAMAQDIRVVLIKLADRLHNMQTLKFMT 159
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
K++ A+ETL I+ P+A+RLGI K LE+L +++ P+ + EL+ ++ E +
Sbjct: 160 PAKQKEIAEETLNIYAPIAHRLGICKIKADLEDLSLRYMEPEVYYELAHQISSKRMERI- 218
Query: 180 TSAIEKLEQALKDKNISF---LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
IE + Q +K+K + V+ GR K +SI+ K++ K T+D+I+D++ +R IV++
Sbjct: 219 -QYIEHIVQQIKEKVSAAGIEAVIEGRPKHFFSIYKKIVNKNKTLDQIYDLFAVRAIVKS 277
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY L ++H+++ +PG+ KDYI PK N Y+SLHT + GE P E+QIRT+EMH
Sbjct: 278 VKDCYGVLGIIHEMYTPIPGRFKDYIAMPKPNMYRSLHTTLMGEEGTPFEMQIRTEEMHR 337
Query: 297 QAEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCE---------AMSKDRSCVG 345
AE+G AAHW+YKEG + + + W R +L WQ + A+ D G
Sbjct: 338 TAEYGIAAHWKYKEGKTDQGTQDKSEEKLTWLREILEWQRDMSDNQEFMSALKGDLDVYG 397
Query: 346 NGDSIKPPC----TFPSHADDCPFSY 367
+ + P T P + F+Y
Sbjct: 398 DQVYVFTPSGELLTLPKGSTPIDFAY 423
>gi|268319355|ref|YP_003293011.1| GTP pyrophosphokinase [Lactobacillus johnsonii FI9785]
gi|262397730|emb|CAX66744.1| GTP pyrophosphokinase [Lactobacillus johnsonii FI9785]
Length = 749
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 196/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA + + VAAG LHDT++D ++ D I FG VA +V
Sbjct: 43 FRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVTNDDIKEKFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 DGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSER-- 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + AI L+Q L I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHKDFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+ MH
Sbjct: 276 SVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPGGKPLEIQIRTEAMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QVAEYGVAAHWAYKEG 351
>gi|238852662|ref|ZP_04643072.1| GTP pyrophosphokinase [Lactobacillus gasseri 202-4]
gi|238834808|gb|EEQ27035.1| GTP pyrophosphokinase [Lactobacillus gasseri 202-4]
Length = 750
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 196/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA + + VAAG LHDT++D ++ D I FG VA +V
Sbjct: 43 FRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVTNDDIKEKFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 DGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSER-- 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + AI+ L+Q L I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 EGYIADAIKTLKQTLDSLGIEYEIY-GRPKHIYSIYKKMVNKHKDFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+ MH
Sbjct: 276 SVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPGGKPLEIQIRTEAMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QVAEYGVAAHWAYKEG 351
>gi|238063876|ref|ZP_04608585.1| relA/spoT family protein [Micromonospora sp. ATCC 39149]
gi|237885687|gb|EEP74515.1| relA/spoT family protein [Micromonospora sp. ATCC 39149]
Length = 828
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 207/345 (60%), Gaps = 23/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D + FG V LV+
Sbjct: 140 RKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRADFGGEVTLLVD 199
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 200 GVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLSFLPA 251
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
KR++ AKETLEI PLA+RLG++T K +LE+L F L P ++ E+ + E E++
Sbjct: 252 PKREQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRYEEILRLIGEHQPQRESL 311
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +K+ LK I GR K LYSI+ KM+ + ++I+D+ G+R++V+
Sbjct: 312 LRQVTQKVGTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDIYDLVGVRILVDTVR 370
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH A
Sbjct: 371 DCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTYAMHRTA 430
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 431 EFGIAAHWKYKEHKGTQIVGPPAH----IDEMTWLRQLLDWQREA 471
>gi|116629512|ref|YP_814684.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus gasseri ATCC 33323]
gi|282852110|ref|ZP_06261468.1| GTP diphosphokinase [Lactobacillus gasseri 224-1]
gi|311110845|ref|ZP_07712242.1| GTP diphosphokinase [Lactobacillus gasseri MV-22]
gi|420147336|ref|ZP_14654612.1| GTP diphosphokinase [Lactobacillus gasseri CECT 5714]
gi|116095094|gb|ABJ60246.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus gasseri ATCC 33323]
gi|282556870|gb|EFB62474.1| GTP diphosphokinase [Lactobacillus gasseri 224-1]
gi|311065999|gb|EFQ46339.1| GTP diphosphokinase [Lactobacillus gasseri MV-22]
gi|398401337|gb|EJN54839.1| GTP diphosphokinase [Lactobacillus gasseri CECT 5714]
Length = 750
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 196/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA + + VAAG LHDT++D ++ D I FG VA +V
Sbjct: 43 FRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVTNDDIKEKFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 DGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSER-- 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + AI+ L+Q L I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 EGYIADAIKTLKQTLDSLGIEYEIY-GRPKHIYSIYKKMVNKHKDFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+ MH
Sbjct: 276 SVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPGGKPLEIQIRTEAMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QVAEYGVAAHWAYKEG 351
>gi|222055238|ref|YP_002537600.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter daltonii FRC-32]
gi|221564527|gb|ACM20499.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter daltonii FRC-32]
Length = 716
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 207/337 (61%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H +E A +LA + + V GLLHDT++D + + + FG VA LV+
Sbjct: 39 RLSGEPYLVHPMEVAGVLAELKLDVPTVVTGLLHDTVEDTLTTLEELEEMFGPEVARLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ +E + +A+ M LAMA D R +L+KLADRLHNM TL P
Sbjct: 99 GVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ AKETL+I+ P+ANRLGIS K +LE+L F++L+P + +L+SK+ + E
Sbjct: 153 PKQRSIAKETLDIYAPIANRLGISWVKSELEDLSFRYLDPQIYYDLASKVTKKKKERETY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V ++ ++ L D I V GR K LYSI+ KM + + +DEI+D+ +R++VE+
Sbjct: 213 VDEVMQIIKAKLVDHGIKGEV-SGRSKHLYSIYRKMQSRSVDIDEIYDLIAIRVMVEDIR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L ++H W +PG+ KDYI PK N YQSLHT V G +EVQIRT EMH A
Sbjct: 272 ECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPYGERMEVQIRTSEMHRVA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E G AAHW+YKEG V + W R +L WQ E
Sbjct: 332 EAGIAAHWKYKEGKGYDEKEVKRFT-WLRQLLEWQQE 367
>gi|16803563|ref|NP_465048.1| hypothetical protein lmo1523 [Listeria monocytogenes EGD-e]
gi|47097020|ref|ZP_00234593.1| GTP pyrophosphokinase [Listeria monocytogenes str. 1/2a F6854]
gi|254828243|ref|ZP_05232930.1| relA [Listeria monocytogenes FSL N3-165]
gi|254912197|ref|ZP_05262209.1| GTP pyrophosphokinase [Listeria monocytogenes J2818]
gi|254936525|ref|ZP_05268222.1| relA [Listeria monocytogenes F6900]
gi|284801913|ref|YP_003413778.1| hypothetical protein LM5578_1668 [Listeria monocytogenes 08-5578]
gi|284995055|ref|YP_003416823.1| hypothetical protein LM5923_1620 [Listeria monocytogenes 08-5923]
gi|386043834|ref|YP_005962639.1| GTP pyrophosphokinase [Listeria monocytogenes 10403S]
gi|386047175|ref|YP_005965507.1| relA [Listeria monocytogenes J0161]
gi|386050499|ref|YP_005968490.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-561]
gi|386053776|ref|YP_005971334.1| GTP pyrophosphokinase [Listeria monocytogenes Finland 1998]
gi|404284015|ref|YP_006684912.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2372]
gi|404410825|ref|YP_006696413.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC5850]
gi|405758571|ref|YP_006687847.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2479]
gi|16410952|emb|CAC99601.1| relA [Listeria monocytogenes EGD-e]
gi|47014602|gb|EAL05562.1| GTP pyrophosphokinase [Listeria monocytogenes str. 1/2a F6854]
gi|258600631|gb|EEW13956.1| relA [Listeria monocytogenes FSL N3-165]
gi|258609119|gb|EEW21727.1| relA [Listeria monocytogenes F6900]
gi|284057475|gb|ADB68416.1| hypothetical protein LM5578_1668 [Listeria monocytogenes 08-5578]
gi|284060522|gb|ADB71461.1| hypothetical protein LM5923_1620 [Listeria monocytogenes 08-5923]
gi|293590170|gb|EFF98504.1| GTP pyrophosphokinase [Listeria monocytogenes J2818]
gi|345534166|gb|AEO03607.1| relA [Listeria monocytogenes J0161]
gi|345537068|gb|AEO06508.1| GTP pyrophosphokinase [Listeria monocytogenes 10403S]
gi|346424345|gb|AEO25870.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-561]
gi|346646427|gb|AEO39052.1| GTP pyrophosphokinase [Listeria monocytogenes Finland 1998]
gi|404230651|emb|CBY52055.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC5850]
gi|404233517|emb|CBY54920.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2372]
gi|404236453|emb|CBY57855.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2479]
gi|441471216|emb|CCQ20971.1| GTP pyrophosphokinase [Listeria monocytogenes]
gi|441474345|emb|CCQ24099.1| GTP pyrophosphokinase [Listeria monocytogenes N53-1]
Length = 738
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|14325225|dbj|BAB60670.1| Rel [Listeria monocytogenes]
Length = 738
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|347548906|ref|YP_004855234.1| putative (p)ppGpp synthetase [Listeria ivanovii subsp. ivanovii PAM
55]
gi|346981977|emb|CBW85962.1| Putative (p)ppGpp synthetase [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 738
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRISNETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLNDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|47094426|ref|ZP_00232112.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
gi|47017201|gb|EAL08048.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
Length = 724
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 29 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 88
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 89 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 142
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 143 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 202
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 203 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 261
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 262 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 321
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 322 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 361
>gi|334562930|ref|ZP_08515921.1| GTP pyrophosphokinase [Corynebacterium bovis DSM 20582]
Length = 754
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 214/342 (62%), Gaps = 16/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A + A IG ++T + A LLHDT++D S + R FGA VA LV
Sbjct: 62 LRKSGEPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTEYSLADLERDFGAEVARLV 121
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMA D R ++IK++DRLHNM T+ LP
Sbjct: 122 DGVTKLDKVA--------LGSAAEAETIRKMIVAMAHDPRVLVIKVSDRLHNMRTMRFLP 173
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEA 177
K+ + A+ETLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 174 PEKQAKKARETLEVIAPLAHRLGMASVKWELEDLAFAILYPKKYDEIVRLVADRAPKRDQ 233
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I++++ A++ +I+ V+ GR K +SI+ KM+ + DEI D+ G+R++VE+
Sbjct: 234 YLAGVIDEVQAAMRSSSITAEVV-GRPKHYWSIYQKMIVRGREFDEIFDLVGIRILVEDV 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VH L+ +PG+ KDYI+ P+F Y+SLHT V G PLEVQIRT EMH
Sbjct: 293 RDCYAAVGAVHSLYQPMPGRFKDYISSPRFGVYRSLHTTVIGPDAKPLEVQIRTYEMHHN 352
Query: 298 AEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE H ++ V QM W R +L WQ EA
Sbjct: 353 AEFGIAAHWRYKETRGSHRGDNAEVDQMA-WMRQLLDWQKEA 393
>gi|421130113|ref|ZP_15590310.1| putative GTP diphosphokinase [Leptospira kirschneri str.
2008720114]
gi|410358572|gb|EKP05728.1| putative GTP diphosphokinase [Leptospira kirschneri str.
2008720114]
Length = 674
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 242/455 (53%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S + + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HN+ TL P
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNLRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|227890126|ref|ZP_04007931.1| GTP diphosphokinase [Lactobacillus johnsonii ATCC 33200]
gi|227849301|gb|EEJ59387.1| GTP diphosphokinase [Lactobacillus johnsonii ATCC 33200]
Length = 749
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 196/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA + + VAAG LHDT++D ++ D I FG VA +V
Sbjct: 43 FRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVTNDDIKEKFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 DGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSER-- 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + AI L+Q L I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHKDFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+ MH
Sbjct: 276 SVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPGGKPLEIQIRTEAMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QVAEYGVAAHWAYKEG 351
>gi|395242383|ref|ZP_10419380.1| GTP diphosphokinase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480115|emb|CCI85620.1| GTP diphosphokinase [Lactobacillus pasteurii CRBIP 24.76]
Length = 743
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 208/344 (60%), Gaps = 12/344 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + +AAG LHDT++D ++ D I + FG VA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTLANLGLDQDTIAAGFLHDTVEDTPVTNDDIKKEFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL+ L
Sbjct: 104 GVTKLNKYQY------KSHQEFLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLNHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNPD + + S L E+
Sbjct: 158 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNPDAYYRIVSLMDLKRSERESY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L++ L I + V GR K +YSI+ KM+ K +EI+D+ +R++V+N
Sbjct: 218 IAETISVLKKTLDSLGIKYEVY-GRPKHIYSIYKKMVDKHKDFNEIYDLLAVRVLVKNVR 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++MH A
Sbjct: 277 DCYAVLGAVHTEWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPGGKPLEIQIRTEQMHQVA 336
Query: 299 EFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEAMSKD 340
E+G AAHW YK G+ +S + ++ R +L + E D
Sbjct: 337 EYGVAAHWAYKRGNFSGVQASSSGEKLDMVREILELKDETKDAD 380
>gi|443290378|ref|ZP_21029472.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Micromonospora
lupini str. Lupac 08]
gi|385886705|emb|CCH17546.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Micromonospora
lupini str. Lupac 08]
Length = 842
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 208/345 (60%), Gaps = 23/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +L +G ++T + A LLHDT++D + D + FG VA LV+
Sbjct: 154 RKSGDPYITHPLAVATILGNLGMDTTTLVAALLHDTIEDTEYTLDAMRADFGGEVALLVD 213
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 214 GVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPR 265
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ AKETLEI PLA+RLG++T K +LE+L F L P ++ E++ + E E++
Sbjct: 266 PKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRYEEINRLIGEHQPQRESL 325
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +K+ LK I GR K LYSI+ KM+ + ++I+D+ G+R++V+
Sbjct: 326 LRQVTQKVGTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDIYDLVGVRILVDTVR 384
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH A
Sbjct: 385 DCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTYAMHRTA 444
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 445 EFGIAAHWKYKEHKGTQIVGPPAH----IDEMTWLRQLLDWQREA 485
>gi|324999169|ref|ZP_08120281.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudonocardia sp. P1]
Length = 777
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 209/339 (61%), Gaps = 13/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + + +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 87 RKSGDPYITHPLAVSTILAELGMDTTTLVAALLHDTVEDTDYSLERLRTDFGDEVAHLVD 146
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E TA+ EA+ + M +AMA D R ++IKL+DRLHNM T+ L
Sbjct: 147 GVTKLDKV-----EFGTAA---EAETIRKMVVAMARDPRVLVIKLSDRLHNMRTMRFLRP 198
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ + A ETLE+F PLA+RLG++T K++LE+L F L P ++ E+ + + +
Sbjct: 199 EKQVKKANETLEVFAPLAHRLGMATVKLELEDLSFAILQPKKYQEIVRLVADRAPSRDTY 258
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+++ L I V GR K YSI+ KM+ K D+IHD+ G+R++VE
Sbjct: 259 LRQVIDEVTSQLDSARIPAKV-EGRPKHYYSIYRKMIVKGRDFDDIHDLVGVRVLVEEVR 317
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ +VH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT MH A
Sbjct: 318 DCYAAIGMVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPLEVQIRTHAMHRTA 377
Query: 299 EFGFAAHWRYKEGDCQHSSFV-LQMVEWARWVLTWQCEA 336
E+G AAHWRYKE S V ++ + W R +L WQ EA
Sbjct: 378 EYGIAAHWRYKEIKGGQSKEVEVEEMAWMRQLLDWQREA 416
>gi|46907751|ref|YP_014140.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226224124|ref|YP_002758231.1| (p)ppGpp synthetase [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824418|ref|ZP_05229419.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J1-194]
gi|254852146|ref|ZP_05241494.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-503]
gi|254931458|ref|ZP_05264817.1| GTP pyrophosphokinase [Listeria monocytogenes HPB2262]
gi|300764810|ref|ZP_07074800.1| GTP pyrophosphokinase [Listeria monocytogenes FSL N1-017]
gi|386732261|ref|YP_006205757.1| (p)ppGpp synthetase [Listeria monocytogenes 07PF0776]
gi|404281082|ref|YP_006681980.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2755]
gi|404286945|ref|YP_006693531.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405749867|ref|YP_006673333.1| GTP pyrophosphokinase [Listeria monocytogenes ATCC 19117]
gi|405752743|ref|YP_006676208.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2378]
gi|405755681|ref|YP_006679145.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2540]
gi|406704296|ref|YP_006754650.1| GTP pyrophosphokinase [Listeria monocytogenes L312]
gi|417316063|ref|ZP_12102721.1| (p)ppGpp synthetase [Listeria monocytogenes J1816]
gi|424714398|ref|YP_007015113.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424823285|ref|ZP_18248298.1| GTP pyrophosphokinase [Listeria monocytogenes str. Scott A]
gi|46881020|gb|AAT04317.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
F2365]
gi|225876586|emb|CAS05295.1| Putative (p)ppGpp synthetase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258605450|gb|EEW18058.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-503]
gi|293583010|gb|EFF95042.1| GTP pyrophosphokinase [Listeria monocytogenes HPB2262]
gi|293593653|gb|EFG01414.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J1-194]
gi|300514486|gb|EFK41543.1| GTP pyrophosphokinase [Listeria monocytogenes FSL N1-017]
gi|328465560|gb|EGF36789.1| (p)ppGpp synthetase [Listeria monocytogenes J1816]
gi|332311965|gb|EGJ25060.1| GTP pyrophosphokinase [Listeria monocytogenes str. Scott A]
gi|384391019|gb|AFH80089.1| (p)ppGpp synthetase [Listeria monocytogenes 07PF0776]
gi|404219067|emb|CBY70431.1| GTP pyrophosphokinase [Listeria monocytogenes ATCC 19117]
gi|404221943|emb|CBY73306.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2378]
gi|404224881|emb|CBY76243.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2540]
gi|404227717|emb|CBY49122.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2755]
gi|404245874|emb|CBY04099.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361326|emb|CBY67599.1| GTP pyrophosphokinase [Listeria monocytogenes L312]
gi|424013582|emb|CCO64122.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 738
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|300361857|ref|ZP_07058034.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
gi|300354476|gb|EFJ70347.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
Length = 750
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 196/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA + + VAAG LHDT++D ++ D I FG VA +V
Sbjct: 43 FRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVTNDDIKEKFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 DGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSER-- 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + AI+ L+Q L I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 EGYIADAIKTLKQTLDSLGIEYEIY-GRPKHIYSIYKKMVNKHKDFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+ MH
Sbjct: 276 SVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPGGKPLEIQIRTEAMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QVAEYGVAAHWAYKEG 351
>gi|414154562|ref|ZP_11410880.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453959|emb|CCO08784.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 723
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 210/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + +++LA + + VAAGLLHD ++D ++ I FGA VA++V+
Sbjct: 39 RISGEDYIVHPLAISIILAELQLDVQTVAAGLLHDVVEDTGITLADIENNFGAEVANMVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L +E +A+ L MFLAMA D R +LIKLADRLHN+ TL
Sbjct: 99 GVTKLGKLQYQTKEER------QAENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETL F P+A+RLGI K +LE+L F++L P+Q+ + +++ + E
Sbjct: 153 RKQKEVAEETLHFFAPMAHRLGIYKIKWELEDLSFRYLEPEQYQRMKAQIAKSRAKREEY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I++L + L NI + GR K+LYSI+ KM++++ + +I D+ +R++V + +
Sbjct: 213 IQGVIKELAEKLAAVNIKAEI-QGRPKNLYSIYQKMIEQQKELKDIFDVQAVRVLVNSVK 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL + H LW +PG+ KDYI PK N YQSLHT V G P+E+QIRT EMH A
Sbjct: 272 DCYGALGIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPNGEPVEIQIRTWEMHRVA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKEG F ++ W R +L Q EA
Sbjct: 332 EYGIAAHWRYKEGAQGEKDFDKKLA-WIRQMLDAQHEA 368
>gi|404413602|ref|YP_006699189.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC7179]
gi|404239301|emb|CBY60702.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC7179]
Length = 738
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|298491762|ref|YP_003721939.1| (p)ppGpp synthetase I ['Nostoc azollae' 0708]
gi|298233680|gb|ADI64816.1| (p)ppGpp synthetase I, SpoT/RelA ['Nostoc azollae' 0708]
Length = 758
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 204/340 (60%), Gaps = 12/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H V A LL +G + ++ AG LHD ++D ++ + I FGA V LVE
Sbjct: 60 RKSGEAYIAHPVAVAGLLRDLGGSPAMIGAGFLHDVVEDTEVTIEEIEEHFGAEVRQLVE 119
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ N T+ +A+ MFLAMA D R +++KLADRLHNM TL +
Sbjct: 120 GVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMSE 173
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
R+R A+ET +IF PLANRLGI K +LE+L FK+L PD E+ + E E
Sbjct: 174 ASRRRSAQETRDIFAPLANRLGIWRVKWELEDLAFKYLEPDAFREIQQHVSEKRTAREEK 233
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A E L + ++ I L + GR K LYSI+ KM ++ EI+D+ LR+IV+ E
Sbjct: 234 LARATEVLRKRMQQAGIQCLDVSGRPKHLYSIYQKMHRQHKEFHEIYDLAALRIIVQTNE 293
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 294 ECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLTGRPLEVQIRTMEMHHVA 353
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
E+G AAHW+YKE +S + E W R +L WQ +
Sbjct: 354 EYGIAAHWKYKETGGSTNSQLTGTDEKFTWLRQLLEWQSD 393
>gi|91774406|ref|YP_544162.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Methylobacillus flagellatus KT]
gi|91708393|gb|ABE48321.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Methylobacillus flagellatus KT]
Length = 740
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 211/339 (62%), Gaps = 10/339 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +LA + + + A LLHD ++D ++ I FG VA+LV
Sbjct: 59 VRRSGEPYVTHPVSVAGILAELHLDPPTLIAALLHDVVEDTGVTKQEISDRFGKQVAELV 118
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+G+SKL ++ E +A++ +A+ M LAM+ D R +L+KLADRLHNM TLD +
Sbjct: 119 DGLSKLDKI-----EFQSATQA-QAENFRKMLLAMSQDVRVILVKLADRLHNMSTLDVMK 172
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++R A+ETL+I+ P+ANRLG++ LE+L FK+L P +H +S ++ +
Sbjct: 173 PEKQRRIARETLDIYAPIANRLGLNEIYQTLEDLSFKYLYPMRHRVISKAVMAARGNRKE 232
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V ++ + Q LK++NI V GR K LYSI+ KM K +T +I+DIYG R+IV +
Sbjct: 233 VVGKILDAINQRLKEQNIEAEV-TGREKHLYSIYKKMTGKTITFSQIYDIYGFRVIVRDL 291
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY AL V+H L+ +PGK KDYI PK NGYQSLHT + G P+E+QIR++EMH
Sbjct: 292 PTCYAALGVLHGLYKPIPGKFKDYIAIPKANGYQSLHTTLFGPFGTPIEIQIRSREMHNI 351
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
A+ G AAHW YK D ++ Q +W + +L Q E+
Sbjct: 352 ADAGVAAHWLYKTTDAHLTALQQQTHQWLQRLLDIQSES 390
>gi|410667595|ref|YP_006919966.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
gi|409105342|gb|AFV11467.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
Length = 726
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 206/338 (60%), Gaps = 10/338 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+ ++ H ++ A +LA + + T + AGLLHD ++D S I FG V LV
Sbjct: 37 FRNSGEAFIEHPLQVACILADLQLDITSIVAGLLHDVVEDTNTSLQDIETDFGPEVRFLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL ++ ++E+ A+ L MFLAMA D R +LIKLADRLHN+ TL A
Sbjct: 97 AGVTKLGKIEYKSKEDR------HAENLRKMFLAMARDIRVILIKLADRLHNLRTLGAHE 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA-- 177
+ K++ A+ETLEIF P+A+RLGI K ++E+L F++L PD++ EL+ ++ + E
Sbjct: 151 VPKQREIARETLEIFAPVAHRLGIYKIKWEMEDLAFRYLEPDKYYELADRIAKKRKERED 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I KL + L + I + GR K+ YSI+ KM+ + + EI+D+ +R+IVE
Sbjct: 211 YINLVITKLREKLTEAGIKAEI-SGRPKNFYSIYRKMVDQGKDLSEIYDLVAVRVIVETV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY L +VH +W +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 270 KECYATLGIVHTMWKPIPGRFKDYIAMPKQNMYQSLHTTLVGPLGEPFELQIRTFEMHRT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHWRYKEG + + + W R +L WQ E
Sbjct: 330 AEYGIAAHWRYKEGGRLNDPEFEKKLSWLRQILEWQHE 367
>gi|422809604|ref|ZP_16858015.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Listeria
monocytogenes FSL J1-208]
gi|378753218|gb|EHY63803.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Listeria
monocytogenes FSL J1-208]
Length = 738
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|258515502|ref|YP_003191724.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum acetoxidans DSM
771]
gi|257779207|gb|ACV63101.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum acetoxidans DSM
771]
Length = 727
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 206/335 (61%), Gaps = 11/335 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +LA + + +A LLHD ++D ++ I + FG+ VA LV+
Sbjct: 36 RISGEPYIFHPLAVAKILADLELDIEALAGALLHDVVEDTEITLQDIEKDFGSEVALLVD 95
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ ++E + +A+ L MFLAMA D R +LIKLADRLHN+ TL A P
Sbjct: 96 GVTKLSKIDFKSKEEH------QAENLRKMFLAMAKDIRVILIKLADRLHNLRTLGAQPE 149
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A ETLEIF PLA+RLGI K ++E+L F+ L P ++ EL+ K+ + + E
Sbjct: 150 AKQKEIALETLEIFAPLAHRLGIYHLKWEIEDLAFRFLQPSKYYELADKVAKTRNKREED 209
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IE L++ D I + GR K LYSI+ KM ++K +I DI +R+ V+ +
Sbjct: 210 INEIIEVLKKKFIDVGIKADI-QGRPKHLYSIYEKMQRQKKDFAQILDIMAVRVTVDTVK 268
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW +PG+ KDYI PK N YQSLHT V G P E+Q+RT EMH A
Sbjct: 269 DCYGTLGIVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPHGDPFEIQMRTWEMHRTA 328
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW YKEG F +++ W R +L WQ
Sbjct: 329 EYGIAAHWCYKEGGHAQKGFDGKLI-WLRQLLEWQ 362
>gi|403237624|ref|ZP_10916210.1| GTP pyrophosphokinase [Bacillus sp. 10403023]
Length = 729
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 212/344 (61%), Gaps = 15/344 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H V+ A +L + + + +A G LHD ++D ++ I F + VA LV
Sbjct: 43 FRKSGEPYIIHPVQVAGILVDLEMDPSTIAGGFLHDVVEDTNVTLQEISDAFSSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSKEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + + A
Sbjct: 157 PEKQRRISNETLEIFAPLAHRLGISRIKWELEDTALRYLNPQQYYRIVNLMKK--KRAER 214
Query: 180 TSAIEKLEQALKDK--NISFLV-LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+E++ + +KD+ +S + GR K +YSI+ KM+ + +EI+D+ +R++V +
Sbjct: 215 EEYLEEVIKEVKDRVDEVSIKADISGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIVVNS 274
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 275 IKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTVEMHQ 334
Query: 297 QAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEAMS 338
AE+G AAHW YKEG Q SSF ++ W R +L WQ +A +
Sbjct: 335 IAEYGIAAHWAYKEGKQVNQQSSFEEKLT-WFREILEWQNDATN 377
>gi|304436591|ref|ZP_07396560.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370287|gb|EFM23943.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 739
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 207/344 (60%), Gaps = 23/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +L + + + A LHD ++D + + I FG V L++
Sbjct: 45 RVSGEPYIVHPMHVAYILTTLHLDDETICAAFLHDVVEDTQTTLEEIEAVFGKNVMTLID 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 105 GVTKLGRIESMSKED------VKLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMRE 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
KRQR A+ETLE++ PLANRLGIS K +LE+LC ++L P+ + L ++ + E
Sbjct: 159 DKRQRIARETLEVYAPLANRLGISGIKAELEDLCLRYLEPEAYYTLVEEVKQKRRERQEF 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A++K+ L+ I + GR K YSI+ KM + +++EI+D+ +R++V +
Sbjct: 219 IQDAVQKIRAQLETAGIEAEI-KGRAKHFYSIYRKMKRDNKSINEIYDLSAVRVLVSTVK 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L V+H +W +PG+ KDYI PK NGYQSLHT V EG PLE+QIRTK MH +
Sbjct: 278 DCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTEG-DPLEIQIRTKAMHQIS 336
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCE 335
EFG AAHW+YKE GD Q + W R +++ Q E
Sbjct: 337 EFGIAAHWKYKEAGRSVGAGDEND-----QKMSWLRQMVSLQKE 375
>gi|188585914|ref|YP_001917459.1| (p)ppGpp synthetase I SpoT/RelA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350601|gb|ACB84871.1| (p)ppGpp synthetase I, SpoT/RelA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 729
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 211/339 (62%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H +E A++LA + + ++AGLLHD ++D + + + FG + LV+
Sbjct: 44 RVSGEEYIVHPIEVALVLADLELDLDTISAGLLHDVMEDTPATREELEELFGDEITLLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+L+ +E + +A+ L MF AMA D R +LIKLADR HNM TL+ LP
Sbjct: 104 GVTKLSRLNFKTKEEH------QAENLRKMFFAMANDIRVILIKLADRTHNMRTLNYLPE 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K++ AKET+EI+ PLANRLGI K +LE+L F+++ P+Q+ L+ ++V+ E
Sbjct: 158 RKQKEIAKETMEIYAPLANRLGIYKIKWELEDLAFRYIEPEQYYYLADRIVQKRMER--E 215
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
I+K++ L+DK + + GR K LYSI+ KM K ++EI+D+ LR+IV N
Sbjct: 216 EYIKKIKVDLRDKLKEMGIDGEIHGRPKHLYSIYSKMKKTGKDLNEIYDLIALRIIVNNV 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L VH +W VPG+ KDYI PK N YQSLHT V +E+QIRT +MH
Sbjct: 276 KDCYAVLGTVHTMWKPVPGRFKDYIAVPKSNMYQSLHTTVLCPQGNLVEIQIRTWDMHKT 335
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YKE + F + V W R +L WQ E
Sbjct: 336 AEYGIAAHWKYKE-NTDDKKFA-EKVSWFRQLLEWQQET 372
>gi|410938453|ref|ZP_11370300.1| putative GTP diphosphokinase [Leptospira noguchii str. 2006001870]
gi|410786378|gb|EKR75322.1| putative GTP diphosphokinase [Leptospira noguchii str. 2006001870]
Length = 680
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 242/455 (53%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S + + R FG + DLV
Sbjct: 50 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDITDLV 109
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HN+ TL P
Sbjct: 110 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNLRTLSFQP 163
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++ E+ + E
Sbjct: 164 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQEVKKNINSKKSEREG 223
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 224 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 278
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 279 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 338
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 339 MNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ--------------DSALDP 383
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 384 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 432
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 433 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 463
>gi|347736231|ref|ZP_08868924.1| GTP pyrophosphokinase rsh [Azospirillum amazonense Y2]
gi|346920343|gb|EGY01483.1| GTP pyrophosphokinase rsh [Azospirillum amazonense Y2]
Length = 733
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 198/333 (59%), Gaps = 7/333 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDPY H +E A LL + + + LLHDT++D + D + R FG +A LV+
Sbjct: 46 RASGDPYFSHPLEVAGLLTQLKLDGASIITALLHDTVEDTLTTLDEVQRLFGPEIARLVD 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS ++ +N + ++ +A+ + LAM+ D R +L+KLADRLHNM TL L
Sbjct: 106 GVTKLS---RIELQNLESDQSKQAENFRKLVLAMSEDIRVLLVKLADRLHNMQTLHYLSK 162
Query: 121 C-KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAM- 178
KR+R A+ETLEI+ PLA R+GI WK QLE L FK LNPD + ++ +L + ++
Sbjct: 163 PEKRKRIARETLEIYAPLAERIGIQRWKDQLEELSFKELNPDAYDSITKRLQDLEEQGAG 222
Query: 179 -VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V I +L L + + + GR K+ YSI KM +K +T +++ D+ R+ VE+
Sbjct: 223 RVDRIITELVDTLHENGLPQATVSGRRKAPYSIWRKMQRKNVTFEQLSDVMAFRITVESI 282
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CYQAL V+H + VPG+ KDY++ PK NGY+SLHT V G +EVQIRT EMH
Sbjct: 283 EQCYQALGVIHARYPVVPGRFKDYVSTPKPNGYRSLHTTVIGPERQRIEVQIRTAEMHEV 342
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVL 330
+E G AAHW YK + W R +L
Sbjct: 343 SELGVAAHWAYKSDGSSQPKTEGRQYRWLRELL 375
>gi|167563693|ref|ZP_02356609.1| GTP pyrophosphokinase [Burkholderia oklahomensis EO147]
Length = 788
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 257/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FG VA+LV+
Sbjct: 91 RQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVD 150
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 151 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 204
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP+++ L + K +
Sbjct: 205 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPNRYATLEKAVKAARGNRREV 264
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E +++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 265 IGKILESVQRAMADAKIGAEI-TGREKTIYSIYKKMRDKQLSFSQVLDVYGFRIVVEHPL 323
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 324 DCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 383
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 384 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 443
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 444 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 499
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 500 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 549
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 550 -----GLALADVTPEV 560
>gi|441523303|ref|ZP_21004929.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia sihwensis NBRC 108236]
gi|441457074|dbj|GAC62890.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia sihwensis NBRC 108236]
Length = 764
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 203/344 (59%), Gaps = 17/344 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FGA VA LV
Sbjct: 74 FRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTSYSLEKLEADFGAEVAHLV 133
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 134 DGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 185
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 186 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEIVRLVADRAPSRDT 245
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ L AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 246 YLARVRSDLNTALGASRITATV-EGRPKHYWSIYQKMIVKGKDFDDIHDLVGMRILCDEV 304
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P F YQSLHT V G PLEVQIRT EMH
Sbjct: 305 RDCYAAIGVVHSLWQPMAGRFKDYIAQPSFGVYQSLHTTVIGPEGKPLEVQIRTFEMHRT 364
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
AEFG AAHWRYKEG + E W R +L WQ EA
Sbjct: 365 AEFGIAAHWRYKEGRKGKGRKATDIAEVDDMAWMRQLLDWQREA 408
>gi|398338439|ref|ZP_10523142.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
kirschneri serovar Bim str. 1051]
gi|418676031|ref|ZP_13237317.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418688085|ref|ZP_13249242.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418695002|ref|ZP_13256028.1| putative GTP diphosphokinase [Leptospira kirschneri str. H1]
gi|418739479|ref|ZP_13295863.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421089191|ref|ZP_15550005.1| putative GTP diphosphokinase [Leptospira kirschneri str. 200802841]
gi|421106960|ref|ZP_15567521.1| putative GTP diphosphokinase [Leptospira kirschneri str. H2]
gi|400323796|gb|EJO71644.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|409957161|gb|EKO16076.1| putative GTP diphosphokinase [Leptospira kirschneri str. H1]
gi|410002142|gb|EKO52665.1| putative GTP diphosphokinase [Leptospira kirschneri str. 200802841]
gi|410007974|gb|EKO61652.1| putative GTP diphosphokinase [Leptospira kirschneri str. H2]
gi|410737509|gb|EKQ82250.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410753279|gb|EKR10248.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 674
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 242/455 (53%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S + + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HN+ TL P
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNLRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|213966136|ref|ZP_03394323.1| RelA/SpoT family protein [Corynebacterium amycolatum SK46]
gi|213951234|gb|EEB62629.1| RelA/SpoT family protein [Corynebacterium amycolatum SK46]
Length = 753
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 212/341 (62%), Gaps = 16/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A + A IG ++T + A LLHDT++D + + + R FG VA LV+
Sbjct: 63 RKSGEPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYTLEDLERDFGPEVARLVD 122
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 123 GVTKLDKVA--------LGSAAEAETVRKMIIAMSQDPRVLVIKVADRLHNMRTMRFLPP 174
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA--M 178
K+ + A+ETLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 175 EKQAKKARETLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEIVRLVADRAPQRDRY 234
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ E +++ LK+ +I+ V GR K +SI+ KM+ + DEI D+ GLR++V+ +
Sbjct: 235 IQEVSEMIQKDLKESHIAAEV-QGRPKHYWSIYQKMIVRGHEFDEIFDLVGLRVLVDTTK 293
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VH L+ +PG+ KDYI+ P+F YQSLHT V G G PLEVQIRT EMH A
Sbjct: 294 DCYAAMGAVHSLFKPMPGRFKDYISAPRFGVYQSLHTTVIGPGGSPLEVQIRTHEMHYNA 353
Query: 299 EFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKE H S+ V QM W R +L WQ EA
Sbjct: 354 EYGIAAHWRYKETKGSHKGDSAEVDQMA-WMRQLLDWQREA 393
>gi|257066403|ref|YP_003152659.1| (p)ppGpp synthetase I SpoT/RelA [Anaerococcus prevotii DSM 20548]
gi|256798283|gb|ACV28938.1| (p)ppGpp synthetase I, SpoT/RelA [Anaerococcus prevotii DSM 20548]
Length = 726
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 210/338 (62%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y +H + A L+ + + + AGL+HD L+D ++ + + FG + LV+
Sbjct: 44 RNSGEDYFIHPIAVARKLSDMKLDDETICAGLMHDVLEDTPVTREEMAEEFGEEITFLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL L+ +RE +AD + M +AM+ D R VLIKL+DRLHNM TL+ +
Sbjct: 104 GVTKLKNLNYTSREEK------QADNIRKMVMAMSNDVRVVLIKLSDRLHNMRTLEYMTR 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K+ + A ETLEI+VPLA+RLGI + K +LE+LCF++ P+++ EL+ + EA
Sbjct: 158 KKQIQIADETLEIYVPLAHRLGIYSLKWELEDLCFRYQEPEKYYELAEMVNVKRREREAY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I L +LK +I+F + GR KSLYSI+ KM + + DEI+D+ +R+IV+
Sbjct: 218 INEIINTLTNSLKGTSINFEI-SGRPKSLYSINKKMERNGIAFDEIYDLTAIRVIVDTIA 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY L VH LW +P ++KDY+ +PK NGY+SLHT V GE P EVQIRT++MH +
Sbjct: 277 ECYAVLGKVHSLWRPIPNRIKDYVGQPKPNGYRSLHTTVFGEDSKPFEVQIRTRQMHKEC 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKE + S F M + R ++ WQ E
Sbjct: 337 EYGVAAHWRYKENNNTKSDFDDAM-SFLRRIVEWQQEG 373
>gi|289434803|ref|YP_003464675.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171047|emb|CBH27589.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 738
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEEFGSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|294828236|ref|NP_713265.2| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. 56601]
gi|417760220|ref|ZP_12408246.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000624]
gi|417765432|ref|ZP_12413394.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|417768721|ref|ZP_12416648.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Pomona]
gi|417776288|ref|ZP_12424129.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000621]
gi|417785522|ref|ZP_12433226.1| putative GTP diphosphokinase [Leptospira interrogans str. C10069]
gi|418666430|ref|ZP_13227853.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418675521|ref|ZP_13236812.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000623]
gi|418682526|ref|ZP_13243741.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|418693250|ref|ZP_13254313.1| putative GTP diphosphokinase [Leptospira interrogans str. FPW2026]
gi|418705583|ref|ZP_13266447.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|418709158|ref|ZP_13269952.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418717424|ref|ZP_13277086.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 08452]
gi|418723737|ref|ZP_13282571.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12621]
gi|418731431|ref|ZP_13289830.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12758]
gi|421116511|ref|ZP_15576896.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|421119978|ref|ZP_15580292.1| putative GTP diphosphokinase [Leptospira interrogans str. Brem 329]
gi|421125931|ref|ZP_15586175.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135462|ref|ZP_15595584.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|293386086|gb|AAN50283.2| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. 56601]
gi|400325689|gb|EJO77963.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400352369|gb|EJP04565.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400356908|gb|EJP13066.1| putative GTP diphosphokinase [Leptospira interrogans str. FPW2026]
gi|409943787|gb|EKN89378.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000624]
gi|409949367|gb|EKN99344.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Pomona]
gi|409951387|gb|EKO05902.1| putative GTP diphosphokinase [Leptospira interrogans str. C10069]
gi|409962535|gb|EKO26269.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12621]
gi|410011971|gb|EKO70077.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410020359|gb|EKO87162.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410347064|gb|EKO97983.1| putative GTP diphosphokinase [Leptospira interrogans str. Brem 329]
gi|410436583|gb|EKP85695.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410573896|gb|EKQ36937.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000621]
gi|410577683|gb|EKQ45553.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000623]
gi|410757794|gb|EKR19401.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410764849|gb|EKR35552.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410770494|gb|EKR45713.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410773963|gb|EKR53984.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12758]
gi|410787021|gb|EKR80756.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 08452]
gi|455665880|gb|EMF31366.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Fox 32256]
gi|455791273|gb|EMF43089.1| putative GTP diphosphokinase [Leptospira interrogans serovar Lora
str. TE 1992]
gi|456825939|gb|EMF74313.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 674
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 242/455 (53%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S + + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HN+ TL P
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNLRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|402310465|ref|ZP_10829429.1| putative GTP diphosphokinase [Eubacterium sp. AS15]
gi|400368388|gb|EJP21399.1| putative GTP diphosphokinase [Eubacterium sp. AS15]
Length = 739
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 212/345 (61%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H VE A +LA + + +AAGL+HD ++D ++ D + FG +A LV
Sbjct: 36 VRRSGEKYIIHPVEVANILAELELDVASIAAGLMHDVVEDTEVTSDQMKSMFGEEIAKLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ +E N +A+ L MF+AM D R VLIKLADRLHNM TL +P
Sbjct: 96 DGVTKLGKIAYKTKEEN------QAENLRKMFMAMGDDIRVVLIKLADRLHNMRTLKFMP 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEA 177
K +KETLEIF P+A RLG+ K ++E++ ++ PD + ++ +++ E+
Sbjct: 150 PYKAVIKSKETLEIFAPIAERLGMFKIKWEMEDIALRYTEPDFYFDMRRQIMRRLYQRES 209
Query: 178 MVTSAIEKLEQAL-KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+T I+ L++ L K+ + + GR K+LYSI+ KM K +EI+D +R+IV+
Sbjct: 210 YITDMIDFLKENLAKEIPNNHFEIYGREKNLYSIYKKMKFKNKAFEEIYDFLAIRVIVQT 269
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+ +CY L +VH +W +P + KDYI PK N YQSLHT V G G +E+QIRT+EMH
Sbjct: 270 KAECYWVLGIVHSMWKPIPDRNKDYIGNPKVNNYQSLHTTVFGPGGELVEIQIRTEEMHK 329
Query: 297 QAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEAMSKD 340
AE+G AAHW+YK+G H S + + + W R ++ WQ E D
Sbjct: 330 TAEYGIAAHWKYKQGRIDPHESEMDKKLAWLRQLMDWQKEVTDPD 374
>gi|429727583|ref|ZP_19262348.1| putative GTP diphosphokinase [Peptostreptococcus anaerobius VPI
4330]
gi|429151973|gb|EKX94811.1| putative GTP diphosphokinase [Peptostreptococcus anaerobius VPI
4330]
Length = 739
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 246/451 (54%), Gaps = 46/451 (10%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A +LA + + + G+LHD ++D I FG VA LV
Sbjct: 40 VRKSGEPYIIHPLAVANILADMQLDMDTICGGILHDVVEDTEYEESDIEEMFGKDVAVLV 99
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + +E + +++ L MFLAMA D R +LIKLADRLHNM TL+ +
Sbjct: 100 DGVTKLGKIQYMTKEES------QSENLRKMFLAMAKDMRVILIKLADRLHNMRTLEYMD 153
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K + A+ETL+I+ +A+RLGI T K +LE+L + L+P+ + L K+ + + E
Sbjct: 154 SNKARYKARETLDIYAGIAHRLGIQTIKWELEDLSLRFLDPEGYYSLVKKVNKKREQREC 213
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + ++ L+ + I V GR K YSI+ KM KK + DEI+D+ +R+IV+
Sbjct: 214 YIANIVDMLKGKFQQMEIPSDVY-GRPKHFYSIYRKMKKKNKSFDEIYDLTAVRIIVDTV 272
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L VVH LW +PG+ KDYI PK N YQSLHT V G P+E+QIRTKEMH
Sbjct: 273 KDCYGVLGVVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGADGEPVEIQIRTKEMHQV 332
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF 356
AE+GFAAHW+YKEG L + ++W R ++ W+ + +K P F
Sbjct: 333 AEYGFAAHWKYKEGVTDKDVSALDEKLQWFRMMMEWEKD--------------VKDPHEF 378
Query: 357 PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYG 416
D +Y+ V+V + + V E PT ST +D R S G
Sbjct: 379 LDALKDDVLTYQ--------VYVFTPQGE---VIELPTGSTTIDFAYRIHSKVGN-SCVG 426
Query: 417 FPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
+ + P L+H LK GD+VE+
Sbjct: 427 AKVNGRIVP-LDH--------ILKNGDIVEI 448
>gi|386740500|ref|YP_006213680.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 31]
gi|384477194|gb|AFH90990.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 31]
Length = 763
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 74 FRKSGDPYITHPLAVATITAEIGMDTTTLVAALLHDTVEDTEYSLEDLTRDFGEEVARLV 133
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 134 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 185
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 186 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEVVRLVADRAPSRDR 245
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +L+QALK+ +I V+ GR K +SI+ KM+ + ++I D+ G+R++V++
Sbjct: 246 YLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDIFDLVGIRILVDSI 304
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ PLEVQ+RT EMH
Sbjct: 305 NNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKPLEVQVRTHEMHFN 364
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 365 AEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 405
>gi|416938722|ref|ZP_11934326.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. TJI49]
gi|325524709|gb|EGD02697.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. TJI49]
Length = 788
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 255/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPT 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YS++ KM K+L+ ++ D+YG R++VEN
Sbjct: 264 ISKILEAAQRAMSDAKIDAEI-TGREKTIYSVYRKMRDKQLSFSQVLDVYGFRVVVENPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLGGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G S + +W + +L Q EA + P +
Sbjct: 383 EAGVAAHWLYKNGGADLSDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 442
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 443 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 498
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 499 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 548
Query: 465 RMYERGLAVSNTGPAV 480
GL++++ GP V
Sbjct: 549 -----GLSLADVGPEV 559
>gi|238018954|ref|ZP_04599380.1| hypothetical protein VEIDISOL_00814 [Veillonella dispar ATCC 17748]
gi|237864438|gb|EEP65728.1| hypothetical protein VEIDISOL_00814 [Veillonella dispar ATCC 17748]
Length = 746
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 207/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASG+PY++H + A +LA + + + A L+HD ++D S + + + FG+ VA LV
Sbjct: 57 LRASGEPYIMHPLAVAEILAHLQIDHITLMAALMHDVVEDTSYSKEDLEKMFGSEVAFLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKLADRLHNM TL +
Sbjct: 117 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLADRLHNMRTLKHMR 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E
Sbjct: 171 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQARED 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V + +L +AL + +I + GR K YSI+ KM K + +I+D+ +R+IV+
Sbjct: 231 IVNDTMSQLTKALGEAHIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTI 289
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H LW +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 290 PDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 349
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 350 SEYGVAAHWRYKEGNKNGDKDFDQKVAWLRQVLEWQ 385
>gi|167570843|ref|ZP_02363717.1| GTP pyrophosphokinase [Burkholderia oklahomensis C6786]
Length = 788
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 207/338 (61%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FG VA+LV+
Sbjct: 91 RQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVD 150
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 151 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 204
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP+++ L + K +
Sbjct: 205 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPNRYATLEKAVKAARGNRREV 264
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E +++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 265 IGKILESVQRAMADAKIGAEI-TGREKTIYSIYKKMRDKQLSFSQVLDVYGFRIVVEHPL 323
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 324 DCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 383
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + + +W + +L Q EA
Sbjct: 384 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 421
>gi|291549196|emb|CBL25458.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus torques L2-14]
Length = 773
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 217/348 (62%), Gaps = 15/348 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H + A++LA + + + AG+LHD ++D ++ D I FG VA LV
Sbjct: 75 FRKSGEPYIIHPLWVAIILADLEMDKETIVAGMLHDVVEDTTMTLDEISAEFGEEVALLV 134
Query: 61 EGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL QL N + K +A+ L MFLAMA D R +++KLADRLHNM T++ +
Sbjct: 135 DGVTKLGQL------NYSQDKLEAQAENLRKMFLAMAKDIRVIIVKLADRLHNMRTMEFM 188
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDE 176
K++ ++ET++I+ P+A RLGIS K +L++L K+ P+ + +L L + E
Sbjct: 189 TPAKQKEKSRETMDIYAPIAQRLGISKIKTELDDLSLKYYQPEVYNQLVHDLNARKTERE 248
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV++
Sbjct: 249 EFVQQIVAEVSKHMKNADIEAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDLFAVRIIVDS 307
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT+EMH
Sbjct: 308 VKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLIGPSGQPFEIQIRTEEMHK 367
Query: 297 QAEFGFAAHWRYKE-GDCQHSSFVLQ--MVEWARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE G Q + W R +L WQ + MS +R
Sbjct: 368 TAEYGIAAHWKYKETGGSNTKGLNTQEEKLNWLRQILEWQRD-MSDNR 414
>gi|345023332|ref|ZP_08786945.1| GTP pyrophosphokinase [Ornithinibacillus scapharcae TW25]
Length = 732
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 209/342 (61%), Gaps = 14/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+ Y++H ++ A +L + + +A G LHD ++D ++ + I F VA LV
Sbjct: 43 FRKSGEAYIIHPIQVAGILVDLKMDPETIAGGFLHDVVEDTDITLEMIEEEFNKEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSKEAQ------QAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++ A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + + D+ +
Sbjct: 157 PEKQRIKANETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKRDQRVS 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ L++ NI + GR K LYSI+ KM+K+ +EI+D+ +R++V +
Sbjct: 217 YIDEVIQEVSDQLEELNIEAEI-SGRPKHLYSIYQKMVKQNKQFNEIYDLLAVRVLVNSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH
Sbjct: 276 KDCYAVLGIIHTCWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPKGDPLEVQIRTKEMHEI 335
Query: 298 AEFGFAAHWRYKEG---DCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG + +F + + W R +L WQ E
Sbjct: 336 AEYGIAAHWAYKEGKQINNDKKTFE-EKLSWFREILEWQNET 376
>gi|45656898|ref|YP_000984.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|421087294|ref|ZP_15548135.1| putative GTP diphosphokinase [Leptospira santarosai str. HAI1594]
gi|421102246|ref|ZP_15562852.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600135|gb|AAS69621.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
gi|410367953|gb|EKP23335.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430403|gb|EKP74773.1| putative GTP diphosphokinase [Leptospira santarosai str. HAI1594]
Length = 674
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 242/455 (53%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S + + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HN+ TL P
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNLRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|289423171|ref|ZP_06424986.1| GTP diphosphokinase [Peptostreptococcus anaerobius 653-L]
gi|289156502|gb|EFD05152.1| GTP diphosphokinase [Peptostreptococcus anaerobius 653-L]
Length = 739
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 246/451 (54%), Gaps = 46/451 (10%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A +LA + + + G+LHD ++D I FG VA LV
Sbjct: 40 VRKSGEPYIIHPLAVANILADMQLDMDTICGGILHDVVEDTEYEESDIEEMFGKDVAVLV 99
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + +E + +++ L MFLAMA D R +LIKLADRLHNM TL+ +
Sbjct: 100 DGVTKLGKIQYMTKEES------QSENLRKMFLAMAKDMRVILIKLADRLHNMRTLEYMD 153
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K + A+ETL+I+ +A+RLGI T K +LE+L + L+P+ + L K+ + + E
Sbjct: 154 SNKARYKARETLDIYAGIAHRLGIQTIKWELEDLSLRFLDPEGYYSLVKKVNKKREQREC 213
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + ++ L+ + I V GR K YSI+ KM KK + DEI+D+ +R+IV+
Sbjct: 214 YIANIVDMLKGKFQQMEIPSDVY-GRPKHFYSIYRKMKKKNKSFDEIYDLTAVRIIVDTV 272
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L VVH LW +PG+ KDYI PK N YQSLHT V G P+E+QIRTKEMH
Sbjct: 273 KDCYGVLGVVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGADGEPVEIQIRTKEMHQV 332
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF 356
AE+GFAAHW+YKEG L + ++W R ++ W+ + +K P F
Sbjct: 333 AEYGFAAHWKYKEGVTDKDVSALDEKLQWFRMMMEWEKD--------------VKDPHEF 378
Query: 357 PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYG 416
D +Y+ V+V + + V E PT ST +D R S G
Sbjct: 379 LDALKDDVLTYQ--------VYVFTPQGE---VIELPTGSTTIDFAYRIHSKVGN-SCVG 426
Query: 417 FPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
+ + P L+H LK GD+VE+
Sbjct: 427 AKVNGRIVP-LDH--------ILKNGDIVEI 448
>gi|379715466|ref|YP_005303803.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 316]
gi|383314350|ref|YP_005375205.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis P54B96]
gi|384511044|ref|YP_005690622.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis PAT10]
gi|392400702|ref|YP_006437302.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis Cp162]
gi|341824983|gb|AEK92504.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis PAT10]
gi|377654172|gb|AFB72521.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 316]
gi|380869851|gb|AFF22325.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis P54B96]
gi|390531780|gb|AFM07509.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis Cp162]
Length = 763
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 74 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLEDLTRDFGEEVARLV 133
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 134 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 185
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 186 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEVVRLVADRAPSRDR 245
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +L+QALK+ +I V+ GR K +SI+ KM+ + ++I D+ G+R++V++
Sbjct: 246 YLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDIFDLVGIRILVDSI 304
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ PLEVQ+RT EMH
Sbjct: 305 NNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKPLEVQVRTHEMHFN 364
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 365 AEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 405
>gi|406962538|gb|EKD88859.1| hypothetical protein ACD_34C00295G0001, partial [uncultured
bacterium]
Length = 691
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 210/361 (58%), Gaps = 31/361 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ HCV A++LA + VV+A LLHDT++D ++ D I + FG + LV+
Sbjct: 46 RASGEPYITHCVAVAIILAEMQVQPIVVSAALLHDTVEDTKITLDDIRKEFGTEIGGLVD 105
Query: 62 GVSKLSQLSKLARENN-------TASKTVEAD-------------------RLHTMFLAM 95
GV+KL+ L +++R + +K EAD L FLAM
Sbjct: 106 GVTKLTHLPRVSRADQHDAEIFEQITKDSEADDSLLDSQLARDRRRDLANETLRKTFLAM 165
Query: 96 A-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLC 154
D R +LIKLADRLHNM TL +P KR+R A+ETL+IF PLANRLGI K +LE+L
Sbjct: 166 GEDIRVILIKLADRLHNMRTLGFMPEKKRKRIAQETLDIFAPLANRLGIWQLKWELEDLG 225
Query: 155 FKHLNPDQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHC 212
F++ NP+++ E++ L E E + + +KLE+ L D + + + R K ++SI+
Sbjct: 226 FRYTNPEKYKEIAQNLSETRLERDRQMQAISDKLEKLLSDAGVK-VDISARSKHIFSIYK 284
Query: 213 KMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQS 272
KM +K + + D+ G+RLIV + CY AL ++H W +P + DYI PK N YQS
Sbjct: 285 KMQEKNKPFELVRDLRGVRLIVPDIPSCYSALGLIHTNWRPIPNEFDDYIAGPKDNFYQS 344
Query: 273 LHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTW 332
LHT + + PLEVQIRT EM AEFG AAHW+YKE H Q + W + ++ W
Sbjct: 345 LHTAILYDDGKPLEVQIRTPEMDENAEFGIAAHWKYKE-KGPHDEKYEQRINWLKKLMEW 403
Query: 333 Q 333
+
Sbjct: 404 R 404
>gi|238926103|ref|ZP_04657863.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
gi|238885993|gb|EEQ49631.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
Length = 739
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 207/344 (60%), Gaps = 23/344 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +L + + + A LHD ++D + + I FG V L++
Sbjct: 45 RVSGEPYIVHPMHVAYILTTLHLDDETICAAFLHDVVEDTQTTLEEIEAVFGKNVMTLID 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 105 GVTKLGRIESMSKED------VKLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMRE 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
KRQR A+ETLE++ PLANRLGIS K +LE+LC ++L P+ + L ++ + E
Sbjct: 159 DKRQRIARETLEVYAPLANRLGISGIKAELEDLCLRYLEPEAYYTLVEEVKQKRRERQEF 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A++K+ L+ I + GR K YSI+ KM + +++EI+D+ +R++V +
Sbjct: 219 IQDAVQKIRAQLEAAGIEAEI-KGRAKHFYSIYRKMKRDNKSINEIYDLSAVRVLVSTVK 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L V+H +W +PG+ KDYI PK NGYQSLHT V EG PLE+QIRTK MH +
Sbjct: 278 DCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTEG-DPLEIQIRTKAMHQIS 336
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCE 335
EFG AAHW+YKE GD Q + W R +++ Q E
Sbjct: 337 EFGIAAHWKYKEAGRSVGAGDEND-----QKMSWLRQMVSLQKE 375
>gi|386851465|ref|YP_006269478.1| GTP pyrophosphokinase [Actinoplanes sp. SE50/110]
gi|359838969|gb|AEV87410.1| GTP pyrophosphokinase [Actinoplanes sp. SE50/110]
Length = 810
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 207/345 (60%), Gaps = 23/345 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + FGA VA LV+
Sbjct: 122 RKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQMRNDFGAEVALLVD 181
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 182 GVTKLDRV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPR 233
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E++ + E EA+
Sbjct: 234 AKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREAL 293
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ LK I GR K LYSI+ KM+ + ++I+D+ G+R++V+
Sbjct: 294 LRQVTNRVSLDLKSAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDIYDLVGVRILVDTVR 352
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH A
Sbjct: 353 DCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTFAMHRTA 412
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 413 EFGIAAHWKYKEQKGATIVGPPAH----IDEMTWLRQLLDWQREA 453
>gi|124024980|ref|YP_001014096.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL1A]
gi|123960048|gb|ABM74831.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL1A]
Length = 778
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/334 (45%), Positives = 203/334 (60%), Gaps = 16/334 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H V A LL IGA+++V+AAG LHD ++D ++ + + FG+ V LV
Sbjct: 84 FRKSGEPYITHPVAVADLLREIGASASVIAAGFLHDVVEDTDITPEQLEGYFGSEVRYLV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL + NN +A+ L MFLAM+ D R VL+KLADRLHNM T+ L
Sbjct: 144 EGVTKLGGIHF----NNRTE--AQAENLRKMFLAMSSDIRVVLVKLADRLHNMRTISYLG 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K+ R A+ET EI+ PLANRLGI K +LE+L FK L PD E+ ++ E
Sbjct: 198 EEKQIRIARETREIYAPLANRLGIGRLKWELEDLAFKLLEPDPFREIQQQIASKRSEREE 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + ++ L+ L + + GR K LY I KM ++K EI D+ LR+IV +
Sbjct: 258 RLNTTVQLLKDRLNSAGLHQCEVSGRPKHLYGIWSKMQRQKKEFHEIFDVAALRIIVLDV 317
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT EMH
Sbjct: 318 ETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTPEMHRV 376
Query: 298 AEFGFAAHWRYKEG------DCQHSSFVLQMVEW 325
+EFG AAHW+YKEG D + +++ Q+VEW
Sbjct: 377 SEFGIAAHWKYKEGGSPANPDSEKFNWLRQLVEW 410
>gi|306820100|ref|ZP_07453748.1| GTP diphosphokinase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551878|gb|EFM39821.1| GTP diphosphokinase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 739
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 212/345 (61%), Gaps = 11/345 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H VE A +LA + + +AAGL+HD ++D ++ D + FG +A LV
Sbjct: 36 VRRSGEKYIIHPVEVANILAELELDVASIAAGLMHDVVEDTEVTSDQMKSMFGEEIAKLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ +E N +A+ L MF+AM D R VLIKLADRLHNM TL +P
Sbjct: 96 DGVTKLGKIAYKTKEEN------QAENLRKMFMAMGDDIRVVLIKLADRLHNMRTLKFMP 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEA 177
K +KETLEIF P+A RLG+ K ++E++ ++ PD + ++ +++ E+
Sbjct: 150 PYKAVIKSKETLEIFAPIAERLGMFKIKWEMEDIALRYTEPDFYFDMRRQIMRRLYQRES 209
Query: 178 MVTSAIEKLEQAL-KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+T I+ L++ L K+ + + GR K+LYSI+ KM K +EI+D +R+IV+
Sbjct: 210 YITDMIDFLKENLAKEIPNNHFEIYGREKNLYSIYKKMKFKNKAFEEIYDFLAIRVIVQT 269
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+ +CY L +VH +W +P + KDYI PK N YQSLHT V G G +EVQIRT+EMH
Sbjct: 270 KAECYWVLGIVHGMWKPIPDRNKDYIGNPKVNNYQSLHTTVFGPGGELVEVQIRTEEMHK 329
Query: 297 QAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEAMSKD 340
AE+G AAHW+YK+G H S + + + W R ++ WQ E D
Sbjct: 330 TAEYGIAAHWKYKQGRIDPHESEMDKKLAWLRQLMDWQKEVTDPD 374
>gi|167837498|ref|ZP_02464381.1| GTP pyrophosphokinase [Burkholderia thailandensis MSMB43]
gi|424903250|ref|ZP_18326763.1| GTP pyrophosphokinase [Burkholderia thailandensis MSMB43]
gi|390931123|gb|EIP88524.1| GTP pyrophosphokinase [Burkholderia thailandensis MSMB43]
Length = 789
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 256/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FG VA+LV+
Sbjct: 91 RQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVD 150
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 151 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 204
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 205 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 264
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E +++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 265 IGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFSQVLDVYGFRIVVEHPL 323
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 324 DCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 383
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 384 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 443
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 444 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 499
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 500 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 549
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 550 -----GLALADVAPEV 560
>gi|308233820|ref|ZP_07664557.1| (p)ppGpp synthetase I, SpoT/RelA [Atopobium vaginae DSM 15829]
gi|328944552|ref|ZP_08242013.1| GTP diphosphokinase [Atopobium vaginae DSM 15829]
gi|327490953|gb|EGF22731.1| GTP diphosphokinase [Atopobium vaginae DSM 15829]
Length = 796
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 205/345 (59%), Gaps = 16/345 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAA-IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADL 59
MR SG+PY+ H VE A +LA + + + A LLHDT++D + D I FG V DL
Sbjct: 76 MRQSGEPYINHPVEVAFILAKDLHMDEDSICAALLHDTVEDTSATLDDIRNLFGETVMDL 135
Query: 60 VEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
V+GV+KL+ + + + +A L MFLAM+ D R ++IKLADRLHNM TL AL
Sbjct: 136 VDGVTKLTSIEVSSMDEK------QALNLRKMFLAMSKDIRVIIIKLADRLHNMRTLAAL 189
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ--HTELSSKLVECFDE 176
P +R A+ET++++ PLA+RLGIS+ K +LE+L F +L D+ H L + E
Sbjct: 190 PPHRRNFKARETMDVYAPLADRLGISSIKWELEDLAFLYLEHDEYEHVALMVQETRAQRE 249
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+TS I LEQ L IS + GR K L+SI+ KML+K + ++I+D+ +R++ ++
Sbjct: 250 QNITSTIHMLEQELHKVGISDFQIQGRPKHLWSIYQKMLRKDKSFNDIYDLVAIRVLTKS 309
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY AL VH +W +PG+ KDYI PK NGY+SLHT V G P+E+QIRT EMH
Sbjct: 310 VGDCYLALGAVHTIWHPLPGRFKDYIAMPKPNGYRSLHTTVVGVDARPIEIQIRTFEMHD 369
Query: 297 QAEFGFAAHWRYKEGDCQHSSF------VLQMVEWARWVLTWQCE 335
QAE+G AAHW YK+ + + W R L W +
Sbjct: 370 QAEYGIAAHWLYKKNGSSTGKMSRDEEEIDSQINWIRRSLDWAVD 414
>gi|422416024|ref|ZP_16492981.1| GTP diphosphokinase [Listeria innocua FSL J1-023]
gi|423100605|ref|ZP_17088312.1| GTP diphosphokinase [Listeria innocua ATCC 33091]
gi|313623673|gb|EFR93827.1| GTP diphosphokinase [Listeria innocua FSL J1-023]
gi|370792829|gb|EHN60672.1| GTP diphosphokinase [Listeria innocua ATCC 33091]
Length = 738
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 210/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGEEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|111023852|ref|YP_706824.1| GTP diphosphokinase [Rhodococcus jostii RHA1]
gi|110823382|gb|ABG98666.1| GTP diphosphokinase [Rhodococcus jostii RHA1]
Length = 791
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 206/340 (60%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 104 RKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEQLTDEFGEEVAHLVD 163
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 164 GVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 215
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 216 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEIVRLVADRAPSRDTY 275
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ L I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 276 LAKVRAEINATLTASRIN-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEVR 334
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT +MH A
Sbjct: 335 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTHDMHRTA 394
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
EFG AAHWRYKE +HS V ++ + W R +L WQ EA
Sbjct: 395 EFGIAAHWRYKESKGRHSGDVAEVDDMAWMRQLLDWQREA 434
>gi|384506865|ref|YP_005683534.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis C231]
gi|384508952|ref|YP_005685620.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis I19]
gi|385807648|ref|YP_005844045.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 267]
gi|387140761|ref|YP_005696739.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 1/06-A]
gi|302206299|gb|ADL10641.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis C231]
gi|308276541|gb|ADO26440.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis I19]
gi|355392552|gb|AER69217.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 1/06-A]
gi|383805041|gb|AFH52120.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 267]
Length = 759
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLEDLTRDFGEEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +L+QALK+ +I V+ GR K +SI+ KM+ + ++I D+ G+R++V++
Sbjct: 242 YLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDIFDLVGIRILVDSI 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKPLEVQVRTHEMHFN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 401
>gi|16800626|ref|NP_470894.1| hypothetical protein lin1558 [Listeria innocua Clip11262]
gi|422413014|ref|ZP_16489973.1| GTP diphosphokinase [Listeria innocua FSL S4-378]
gi|16414045|emb|CAC96789.1| relA [Listeria innocua Clip11262]
gi|313618809|gb|EFR90701.1| GTP diphosphokinase [Listeria innocua FSL S4-378]
Length = 738
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 210/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGEEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|453077480|ref|ZP_21980226.1| GTP diphosphokinase [Rhodococcus triatomae BKS 15-14]
gi|452759155|gb|EME17528.1| GTP diphosphokinase [Rhodococcus triatomae BKS 15-14]
Length = 770
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 206/340 (60%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 83 RKSGDPYITHPLAVATILAELGMDTTTLIAALLHDTVEDTGYSLEQLTDEFGEEVAHLVD 142
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 143 GVTKLDKV--------VLGHAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 194
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 195 EKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEIVRLVADRAPSRDTY 254
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ L IS V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 255 LAKVRAEINATLTASRISATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEIR 313
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH A
Sbjct: 314 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTRDMHRTA 373
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
EFG AAHWRYKE +H S ++ + W R +L WQ EA
Sbjct: 374 EFGIAAHWRYKETKGKHGSDTAEVDDMAWMRQLLDWQREA 413
>gi|225026135|ref|ZP_03715327.1| hypothetical protein EUBHAL_00376 [Eubacterium hallii DSM 3353]
gi|224956540|gb|EEG37749.1| RelA/SpoT family protein [Eubacterium hallii DSM 3353]
Length = 758
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 212/335 (63%), Gaps = 10/335 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AG+LHD ++D + + + R F VA LV+
Sbjct: 63 RKSGEPYIIHPLCVAIILAELELDKETIVAGILHDVVEDTTATLEDLSREFNDEVALLVD 122
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS + ++A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 123 GVTKLGQLS-----YSHDKMDLQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRP 177
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++ A+ET++I+ P+A+RLGIS K +L++L K+L P+ + +L KL + E
Sbjct: 178 EKQKEKARETMDIYAPIAHRLGISKIKTELDDLSLKYLQPEVYKDLEEKLQTNKEGRENF 237
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ S I+++ + +++ I + GR K L+SI+ KM + T+D+I+DI+ +R+ V+ +
Sbjct: 238 IQSIIDEVSKHIEEAGIRAEI-DGRVKHLFSIYKKMRNQNKTLDQIYDIFAVRIKVDTVK 296
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 297 DCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSSGTPFEIQIRTFEMHRTA 356
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW+YKEG + + + W R +L WQ
Sbjct: 357 EYGIAAHWKYKEGGGNINK-EEEKLSWLRQILEWQ 390
>gi|94499848|ref|ZP_01306384.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bermanella marisrubri]
gi|94428049|gb|EAT13023.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Oceanobacter sp. RED65]
Length = 710
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 212/342 (61%), Gaps = 15/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY++H + A +L+ + +S + A +LHD ++D + D + FG V++LV
Sbjct: 38 FRRSGDPYIVHPLAVANILSEMHMDSQSLMAAMLHDVIEDTAVPKDALKDQFGETVSELV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GVSKL+ + ++E +A M +AMA D R +L+KLADRLHNM TL A+P
Sbjct: 98 DGVSKLTHIKFESQEEK------QAGNFQKMAMAMAKDIRVILVKLADRLHNMRTLSAMP 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
K++R A ETLEI+ P+ANRLGIS +++LE+LCF +P + + K V+
Sbjct: 152 PEKKRRIAGETLEIYAPIANRLGISNIRIELEDLCFNAKHP-MRSNMIKKAVKSA-RGNR 209
Query: 180 TSAIEKLEQALK----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
+ +EK+ QALK ++ + V+ GR K LYSI+ KM ++K + +I D+YG R+IV+
Sbjct: 210 SELVEKINQALKTRLKEEGLKTRVM-GREKHLYSIYRKMKEQKKSFKQIMDVYGFRIIVD 268
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
N + CY+AL +VH + VPG+ KDYI PK NGYQSLHT V G G V +E+QIRT+EM
Sbjct: 269 NVDSCYRALGIVHNFYKPVPGRFKDYIAIPKSNGYQSLHTTVVGVGGVHIEIQIRTEEME 328
Query: 296 LQAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEA 336
A G AAHW YK+ + Q ++ + +W + +L Q A
Sbjct: 329 AMAHNGIAAHWLYKDDNAQSEANGGKRARQWVQGLLELQQRA 370
>gi|336325683|ref|YP_004605649.1| GTP pyrophosphokinase [Corynebacterium resistens DSM 45100]
gi|336101665|gb|AEI09485.1| GTP pyrophosphokinase [Corynebacterium resistens DSM 45100]
Length = 756
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 213/342 (62%), Gaps = 16/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A + A IG ++T + A LLHDT++D + + + + FGA VA LV
Sbjct: 64 VRKSGEPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYTLEELTKDFGAEVARLV 123
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ EA+ + M +A+A D R ++IK+ADRLHNM T+ LP
Sbjct: 124 DGVTKLDKM--------VLGSAAEAETIRKMIVAIANDPRVLVIKVADRLHNMRTMRFLP 175
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+ + A++TLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + ++
Sbjct: 176 PEKQAKKARQTLEVIAPLAHRLGMATVKWELEDLSFAILYPKKYDEIVRMVADRAPKRDS 235
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ ++E+AL+ I V+ GR K +SI+ KM+ + DEI D+ G+R++V++
Sbjct: 236 YISDVKREIEEALRRSGIHATVV-GRPKHYWSIYQKMIVRGRDFDEIFDLVGIRILVDSV 294
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ +H L+ +PG+ KDYI+ P+F YQSLHT V G PLEVQIRT EMH +
Sbjct: 295 RDCYGAVGAIHTLYHPMPGRFKDYISAPRFGVYQSLHTTVLGPKAKPLEVQIRTHEMHHK 354
Query: 298 AEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE H S V QM W R +L WQ EA
Sbjct: 355 AEFGIAAHWRYKETKGSHKGDSGEVDQMA-WMRQLLDWQKEA 395
>gi|167586479|ref|ZP_02378867.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ubonensis Bu]
Length = 795
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/496 (33%), Positives = 255/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + FG VA+LV+
Sbjct: 97 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVD 156
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 157 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 210
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 211 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 270
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++VEN
Sbjct: 271 ISKILEAAQRAMADAKIDAEI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVENPL 329
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 330 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 389
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 390 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 449
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 450 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 505
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 506 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 555
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 556 -----GLALADVTPEV 566
>gi|384515799|ref|YP_005710891.1| GTP pyrophosphokinase [Corynebacterium ulcerans 809]
gi|397654144|ref|YP_006494827.1| GTP pyrophosphokinase [Corynebacterium ulcerans 0102]
gi|334697000|gb|AEG81797.1| GTP pyrophosphokinase [Corynebacterium ulcerans 809]
gi|393403100|dbj|BAM27592.1| GTP pyrophosphokinase [Corynebacterium ulcerans 0102]
Length = 759
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 215/341 (63%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLEDLTRDFGEEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +L+QAL++ +I V+ GR K +SI+ KM+ + ++I D+ G+R++V++
Sbjct: 242 YLKEITSQLQQALRENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDIFDLVGIRILVDSI 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L+A +PG+ KDYI+ PKF YQSLHT V G+ PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHALYAAMPGRFKDYISSPKFGVYQSLHTTVMGDEGKPLEVQVRTHEMHFN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 401
>gi|333371965|ref|ZP_08463903.1| GTP diphosphokinase [Desmospora sp. 8437]
gi|332975146|gb|EGK12048.1| GTP diphosphokinase [Desmospora sp. 8437]
Length = 737
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 207/337 (61%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H V A +LA + ++T + + +LHD ++D + + + FG VA +V+
Sbjct: 59 RKSGEEYIHHPVAVAGILAELQMDATTLISAILHDVVEDTGATLETVEAEFGETVAQIVD 118
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G++KL Q K +TA E R MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 119 GLTKLKQRMKY---KSTAEHQAENHR--KMFVAMAQDIRVILIKLADRLHNMRTLKYLPE 173
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
KR+R AKETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + K E
Sbjct: 174 AKRRRIAKETLEIFAPLAHRLGISTIKWELEDSSLRNLNPQQYYRIVNLMKQKRAEREKY 233
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + + L+ N+S + GR K +YSI+ KM+K +EI+D+ +R+IV++
Sbjct: 234 LDEVIATIRERLEGMNLSADI-SGRPKHIYSIYRKMVKDHKQFNEIYDLLAVRVIVDSIR 292
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H +W +PG+ KDYI PK N YQSLHT V G P+EVQIRT+EMH A
Sbjct: 293 DCYAVLGIIHTIWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGEPIEVQIRTREMHRIA 352
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW YKEG SF + +++ R +L Q E
Sbjct: 353 EYGIAAHWAYKEGAQIEGSFN-EKLKFFREILEMQQE 388
>gi|456989321|gb|EMG24130.1| putative GTP diphosphokinase, partial [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 493
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 242/455 (53%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S + + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HN+ TL P
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNLRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ A+ P
Sbjct: 333 MNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQDSALD--------------P 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|395236997|ref|ZP_10415120.1| GTP pyrophosphokinase [Turicella otitidis ATCC 51513]
gi|394487806|emb|CCI83208.1| GTP pyrophosphokinase [Turicella otitidis ATCC 51513]
Length = 758
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 208/341 (60%), Gaps = 16/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A + A IG ++T + A LLHDT++D + + FG A LV+
Sbjct: 70 RKSGDPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTDYTLKQLTDEFGQETARLVD 129
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 130 GVTKLDKVALGA--------AAEAETVRKMVVAMAQDPRVLVIKVADRLHNMRTMRFLPP 181
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K+++ A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + + M
Sbjct: 182 EKQEKKARQTLEVIAPLAHRLGMASIKWELEDLSFAILYPKKYDEIVRLVADRAPQRDKM 241
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +LE +LKD NIS V GR K +SI+ KM + DEI D+ G+R++V+
Sbjct: 242 IKEISSQLEASLKDNNISAEV-QGRPKHYWSIYQKMKVRGHEFDEIFDLIGIRVLVDTVA 300
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + VVH L+ +PG+ KDYI+ P+F YQSLHT V E PLEVQ+RT EMH A
Sbjct: 301 DCYAVIGVVHLLYNPMPGRFKDYISAPRFGVYQSLHTTVMTESGRPLEVQVRTHEMHFNA 360
Query: 299 EFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 336
EFG AAHWRYKE H + V QM W R +L WQ EA
Sbjct: 361 EFGIAAHWRYKETKGTHKGDQAEVDQMA-WMRQLLDWQKEA 400
>gi|256619448|ref|ZP_05476294.1| RelA/SpoT protein [Enterococcus faecalis ATCC 4200]
gi|256598975|gb|EEU18151.1| RelA/SpoT protein [Enterococcus faecalis ATCC 4200]
Length = 737
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA G LHD ++D ++ D + FG +A LV
Sbjct: 43 VRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDVTLDDLKEEFGEDIAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENYRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q+ + + + DE A
Sbjct: 157 EDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQYYRIVNLMQSKRDEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V A+E + A +D I + + GR K +YSI+ KM +K +EI+D+ +R+IV++
Sbjct: 217 YVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQS+HT V G P+EVQIRT EMH
Sbjct: 276 KDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGPKGNPVEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 336 AEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|453382568|dbj|GAC82863.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia paraffinivorans NBRC
108238]
Length = 792
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 207/344 (60%), Gaps = 18/344 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + + FG VA LV+
Sbjct: 101 RKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLEELEKDFGPEVAHLVD 160
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 161 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 212
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 213 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 272
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ E +
Sbjct: 273 LARVRADINNALSAARINATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCEEDR 331
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT EMH A
Sbjct: 332 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTHEMHRTA 391
Query: 299 EFGFAAHWRYKEGDCQHSS------FVLQMVEWARWVLTWQCEA 336
EFG AAHWRYKE ++ S + + W R +L WQ EA
Sbjct: 392 EFGIAAHWRYKESGYRNKSGRKTDTAEIDDMAWMRQLLDWQREA 435
>gi|375288764|ref|YP_005123305.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 3/99-5]
gi|371576053|gb|AEX39656.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 3/99-5]
Length = 763
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 74 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLEDLTRDFGEEVARLV 133
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 134 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 185
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 186 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEVVRLVADRAPSRDR 245
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +L+QALK+ +I V+ GR K +SI+ KM+ + ++I D+ G+R++V++
Sbjct: 246 YLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDIFDLVGIRILVDSI 304
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ PLEVQ+RT EMH
Sbjct: 305 NNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKPLEVQVRTHEMHFN 364
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 365 AEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 405
>gi|365175246|ref|ZP_09362677.1| RelA/SpoT family protein [Synergistes sp. 3_1_syn1]
gi|363613138|gb|EHL64661.1| RelA/SpoT family protein [Synergistes sp. 3_1_syn1]
Length = 784
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 199/313 (63%), Gaps = 10/313 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R +G+PY++H V A +L+++ + + A LLHD L+D + + FG V LV+
Sbjct: 92 RHTGEPYIIHTVSVAAILSSMEIDRETIVASLLHDVLEDTATTPQQLSEKFGEDVVILVD 151
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L + E +++ L MF+ MA D R VLIKLADRLHNM T+ +
Sbjct: 152 GVTKLGKLQFKSVEE------YQSENLRKMFVVMAKDIRVVLIKLADRLHNMRTISSHKR 205
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 178
K+ A+ETLEI+ PLA+RLGI K +LE+L F+ L+P+ + ++ ++ + E +
Sbjct: 206 EKQLSIARETLEIYAPLAHRLGIYQVKRELEDLSFRILDPEMYYDIKRRVRKKLPEREGI 265
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A++ LEQ LKD NI+ + GR K YSI+ KM +K L++++++D+ LR+IV+
Sbjct: 266 IKEAMDTLEQRLKDDNINASI-KGRPKHFYSIYEKMRRKNLSLEQLYDLLALRVIVKTIG 324
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CYQ L +VH +W +PG DYI PK N YQSLHT V G PLEVQIRTKEMHL A
Sbjct: 325 ECYQVLGLVHTIWKPIPGLFDDYIANPKSNMYQSLHTTVVGPEGEPLEVQIRTKEMHLLA 384
Query: 299 EFGFAAHWRYKEG 311
E+G AAHW YKEG
Sbjct: 385 EYGIAAHWNYKEG 397
>gi|226366288|ref|YP_002784071.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus opacus B4]
gi|226244778|dbj|BAH55126.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus opacus B4]
Length = 791
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 206/340 (60%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 104 RKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEQLTDEFGEEVAHLVD 163
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 164 GVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 215
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 216 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEIVRLVADRAPSRDTY 275
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ L I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 276 LAKVRAEINATLTASRIN-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEVR 334
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT +MH A
Sbjct: 335 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTHDMHRTA 394
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
EFG AAHWRYKE +HS V ++ + W R +L WQ EA
Sbjct: 395 EFGIAAHWRYKETKGRHSGDVAEVDDMAWMRQLLDWQREA 434
>gi|300858587|ref|YP_003783570.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis FRC41]
gi|384504771|ref|YP_005681441.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 1002]
gi|300686041|gb|ADK28963.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis FRC41]
gi|302330856|gb|ADL21050.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 1002]
Length = 759
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLEDLTRDFGEEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +L+QALK+ +I V+ GR K +SI+ KM+ + ++I D+ G+R++V++
Sbjct: 242 YLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDIFDLVGIRILVDSI 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKPLEVQVRTHEMHFN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 401
>gi|407646893|ref|YP_006810652.1| GTP pyrophosphokinase [Nocardia brasiliensis ATCC 700358]
gi|407309777|gb|AFU03678.1| GTP pyrophosphokinase [Nocardia brasiliensis ATCC 700358]
Length = 795
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 210/341 (61%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV
Sbjct: 107 FRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLEQLTLDFGPEVAHLV 166
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 167 DGVTKLDKVNLGA--------AAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 218
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + AKETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 219 PEKQAKKAKETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYDEIVRLVADRAPSRDT 278
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L I+ +V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 279 YLAKVRAEIVNTLAASRINAIV-EGRPKHYWSIYQKMIVKGKDFDDIHDLVGIRILCDEV 337
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 338 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPDGKPLEVQIRTQDMHRT 397
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
AEFG AAHWRYKE +HS+ ++ + W R +L WQ EA
Sbjct: 398 AEFGIAAHWRYKETRGKHSNDSTEVDDMAWMRQLLDWQREA 438
>gi|295426083|ref|ZP_06818753.1| GTP diphosphokinase [Lactobacillus amylolyticus DSM 11664]
gi|295064252|gb|EFG55190.1| GTP diphosphokinase [Lactobacillus amylolyticus DSM 11664]
Length = 749
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 198/314 (63%), Gaps = 10/314 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LAA+G + +AAG LHDT++D ++ D I + FG VA +V+
Sbjct: 44 RASGQPYIMHPTQVAGTLAALGLDPDTIAAGFLHDTVEDTPVTNDDIKKEFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 104 GVTKLNKYQY------KSHQEFLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP+ + + + + E
Sbjct: 158 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNPEAYYRIVNLVAVKRSEREKY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ AI L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV+
Sbjct: 218 ISDAISVLKKTLDNLGIKYEIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIVKTVR 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++MH A
Sbjct: 277 DCYAVLGAVHTEWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPGGRPLEIQIRTQQMHEVA 336
Query: 299 EFGFAAHWRYKEGD 312
E+G AAHW YK G+
Sbjct: 337 EYGVAAHWAYKRGN 350
>gi|238922253|ref|YP_002935767.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
gi|238873925|gb|ACR73633.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
Length = 770
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/390 (40%), Positives = 229/390 (58%), Gaps = 36/390 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H + A++LA + + + AGLLHD ++D ++ + + + FG VA LV
Sbjct: 73 FRKSGEPYIIHPLCVAIILAELELDKESIIAGLLHDVVEDTVMTSEDVAKEFGDEVALLV 132
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL+QL N K V+A+ L MFLAMA D R +LIKLADRLHNM T+
Sbjct: 133 DGVTKLTQL------NYQHDKIEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQYQ 186
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDE 176
K+ ++ET+EI+ P+A+RLGIS KV+L++L K+L PD + +L + L E
Sbjct: 187 SPAKQIEKSRETMEIYAPIAHRLGISKIKVELDDLSMKYLMPDVYNDLVEQVNLNRPGRE 246
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A + S I+++ + + I + GR K +SI+ KM+ + T+D+I+DI+ +R+ V+
Sbjct: 247 AFIKSIIKEVGMHISNAGIEAEI-DGRVKHFFSIYRKMVNQNKTLDQIYDIFAVRIKVDT 305
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P E+QIRT EMH
Sbjct: 306 VKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNNYQSLHTTLIASNGQPFEIQIRTYEMHK 365
Query: 297 QAEFGFAAHWRYKEG-----DCQHSSFVLQMVEWARWVLTWQCEAMSKDR---SCVGN-- 346
AE+G AAHW+YKEG D Q L W R +L WQ E MS ++ S + N
Sbjct: 366 IAEYGIAAHWKYKEGKTGEKDNQSEEAKLS---WLRQILEWQKE-MSDNKEFLSSIKNDL 421
Query: 347 ---GDSIKPPCTFPSH------ADDCPFSY 367
DS+ C PS A CP +
Sbjct: 422 NLFSDSVY--CFTPSGDVKNLPAGSCPIDF 449
>gi|444919613|ref|ZP_21239613.1| GTP pyrophosphokinase [Cystobacter fuscus DSM 2262]
gi|444708165|gb|ELW49258.1| GTP pyrophosphokinase [Cystobacter fuscus DSM 2262]
Length = 740
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 205/341 (60%), Gaps = 17/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL+H +E A LLA + + + GLLHDT++D + + + FG VA LV
Sbjct: 38 LRKSGEPYLIHPLEVAGLLAELKLDEASIVTGLLHDTIEDTLATAEELTELFGPEVAQLV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+ S A + + +A+ M +AMA D R +L+KLADR HNM TLD +
Sbjct: 98 DGVTKLSKFSASA---TLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMS 154
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL+I+ PLANRLGIS K +LE+L F++L P ++ L K+ E
Sbjct: 155 EEKQRRIAQETLDIYAPLANRLGISWVKTELEDLSFRYLKPQEYLALQDKIGRRKKEREK 214
Query: 174 FDEAMVTSAIEKL-EQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
+ + + T KL E+ LK + + GR K +YSI+ KM + + ++IHD+ R+
Sbjct: 215 YIDDVSTLITTKLTERGLKGE------VSGRFKHVYSIYKKMKSQGIEFEQIHDVIAFRI 268
Query: 233 IVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTK 292
I + CY+AL +VHQLW VPG+ KD+I PK N YQSLHT V G +EVQIRT
Sbjct: 269 ITNSMPACYEALGLVHQLWKPVPGRFKDFIAIPKPNMYQSLHTTVVGPLGERIEVQIRTP 328
Query: 293 EMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+MH AE G AAHW YKEG S + W R ++ WQ
Sbjct: 329 DMHKVAEEGIAAHWAYKEGKALSVSKDDEKFAWLRQLMEWQ 369
>gi|405983984|ref|ZP_11042289.1| RelA/SpoT family protein [Slackia piriformis YIT 12062]
gi|404388799|gb|EJZ83881.1| RelA/SpoT family protein [Slackia piriformis YIT 12062]
Length = 788
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/337 (41%), Positives = 205/337 (60%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H +E A++LA + ++ + A LLHDT++D + + + F VA LV+
Sbjct: 85 RKSGEPFIAHPIEVALILADLRMDADTLCAALLHDTVEDTPTTVEEVSELFNPQVAQLVQ 144
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K++++ + + A+ + MF+AM+ D R ++IKLADRLHNM TL AL
Sbjct: 145 GVTKITRIEVGSLTDEQAAT------IRKMFVAMSKDIRVIVIKLADRLHNMRTLSALKE 198
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 178
+R A+ETLEI+ P+A+RLGI + K +LE+L F +L+P + ++S + E E
Sbjct: 199 DRRIFKARETLEIYAPIAHRLGIGSIKWELEDLSFYYLDPAKFGQISRMVAESRVERERY 258
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IE L L NI+ + GR K LYSI+ KM K+ EI+D+ +R+IV+ +
Sbjct: 259 LADVIETLTGELTKVNITGHI-AGRPKHLYSIYQKMTKRGKGFSEIYDLIAVRVIVKTVK 317
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRT+EMH +
Sbjct: 318 DCYSVLGAVHALWHPMPGRFKDYIAMPKLNMYQSLHTTVIGPSGRPLEVQIRTEEMHRMS 377
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKE + + + W R ++ WQ E
Sbjct: 378 EYGVAAHWRYKEKGSKADEAFDRQIAWLRQMVDWQEE 414
>gi|337290887|ref|YP_004629908.1| GTP pyrophosphokinase [Corynebacterium ulcerans BR-AD22]
gi|334699193|gb|AEG83989.1| GTP pyrophosphokinase [Corynebacterium ulcerans BR-AD22]
Length = 759
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 215/341 (63%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 70 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLEDLTRDFGEEVARLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 130 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 181
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 182 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEVVRLVADRAPSRDR 241
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +L+QAL++ +I V+ GR K +SI+ KM+ + ++I D+ G+R++V++
Sbjct: 242 YLKEITSQLQQALRENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDIFDLVGIRILVDSI 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH L+A +PG+ KDYI+ PKF YQSLHT V G+ PLEVQ+RT EMH
Sbjct: 301 NNCYAAIGVVHALYAAMPGRFKDYISSPKFGVYQSLHTTVMGDEGKPLEVQVRTHEMHFN 360
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 361 AEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 401
>gi|403070228|ref|ZP_10911560.1| GTP pyrophosphokinase [Oceanobacillus sp. Ndiop]
Length = 733
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 210/342 (61%), Gaps = 14/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H V+ A +LA + ++ +A G LHD ++D ++ + + + F +A LV
Sbjct: 43 FRKSGEPYIIHPVQVAGILANLEMDAETIAGGFLHDVVEDTDVTLEKMEQEFNHEIAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +E +A+ MF+AMA D R +LIKLADRLHNM TL L
Sbjct: 103 DGVTKLGKIRYETKEAQ------QAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLS 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + + +E +
Sbjct: 157 SEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKREERES 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I++L L + NI + GR K LYSI+ KM+ + +EI+D+ +R+IV++
Sbjct: 217 YIKEVIDELSVDLHEVNIE-AEMSGRPKHLYSIYQKMVLQNKQFNEIYDLLAVRIIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH
Sbjct: 276 KDCYAVLGIIHTNWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPKGDPLEVQIRTKEMHEI 335
Query: 298 AEFGFAAHWRYKEGDC---QHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG SF ++ W R +L WQ +
Sbjct: 336 AEYGIAAHWAYKEGKQVKPGKKSFEEKLT-WFREILDWQNDT 376
>gi|422485252|ref|ZP_16561614.1| GTP diphosphokinase [Propionibacterium acnes HL043PA2]
gi|327445780|gb|EGE92434.1| GTP diphosphokinase [Propionibacterium acnes HL043PA2]
Length = 774
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 204/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|172040623|ref|YP_001800337.1| GTP pyrophosphokinase [Corynebacterium urealyticum DSM 7109]
gi|448823600|ref|YP_007416765.1| GTP pyrophosphokinase [Corynebacterium urealyticum DSM 7111]
gi|171851927|emb|CAQ04903.1| GTP pyrophosphokinase [Corynebacterium urealyticum DSM 7109]
gi|448277097|gb|AGE36521.1| GTP pyrophosphokinase [Corynebacterium urealyticum DSM 7111]
Length = 758
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/387 (39%), Positives = 224/387 (57%), Gaps = 33/387 (8%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY+ H + A + A IG ++T + A LLHDT++D S + + FG VA LV
Sbjct: 64 MRKSGEPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLEELTTDFGEEVARLV 123
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AM+ D R ++IK+ DRLHNM T+ LP
Sbjct: 124 DGVTKLDKVA--------LGSAAEAETVRKMIVAMSHDPRVLVIKVCDRLHNMRTMRFLP 175
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+ + A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 176 PEKQAKKARETLEVIAPLAHRLGMATVKWELEDLAFAILYPRKYEEIVRIVADRAPKRDQ 235
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +++E A++D I+ V+ GR K +SI+ KM+ + DEI D+ G+R++VE
Sbjct: 236 YIARVKDEIESAMQDTGINAEVV-GRPKHYWSIYQKMIVRGRDFDEIFDLVGIRILVETV 294
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VH L+ +PG+ KDYI+ P+F Y+SLHT V G PLE+QIRT EMH
Sbjct: 295 RDCYAAVGAVHALYQPMPGRFKDYISSPRFGVYKSLHTTVLGPDAKPLEIQIRTLEMHRN 354
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA-------------MSKDRS 342
AE+G AAHWRYKE HS S L + W R +L WQ EA +S D
Sbjct: 355 AEYGIAAHWRYKETRGTHSGTSEDLDQMAWMRQLLDWQKEAADPNEFLDSLRYDLSTDEI 414
Query: 343 CV--GNGDSIKPPCTFPSHADDCPFSY 367
V GD+I T P+ A F+Y
Sbjct: 415 FVFTPKGDAI----TLPAGATPVDFAY 437
>gi|384103695|ref|ZP_10004661.1| GTP diphosphokinase [Rhodococcus imtechensis RKJ300]
gi|419965699|ref|ZP_14481639.1| GTP diphosphokinase [Rhodococcus opacus M213]
gi|424852310|ref|ZP_18276707.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus opacus PD630]
gi|432337532|ref|ZP_19588954.1| GTP diphosphokinase [Rhodococcus wratislaviensis IFP 2016]
gi|356666975|gb|EHI47046.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus opacus PD630]
gi|383838765|gb|EID78133.1| GTP diphosphokinase [Rhodococcus imtechensis RKJ300]
gi|414568892|gb|EKT79645.1| GTP diphosphokinase [Rhodococcus opacus M213]
gi|430775550|gb|ELB91051.1| GTP diphosphokinase [Rhodococcus wratislaviensis IFP 2016]
Length = 791
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 206/340 (60%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 104 RKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEQLTDEFGEEVAHLVD 163
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 164 GVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 215
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 216 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEIVRLVADRAPSRDTY 275
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ L I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 276 LAKVRAEINATLTASRIN-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEVR 334
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT +MH A
Sbjct: 335 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTHDMHRTA 394
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
EFG AAHWRYKE +HS V ++ + W R +L WQ EA
Sbjct: 395 EFGIAAHWRYKETKGRHSGDVAEVDDMAWMRQLLDWQREA 434
>gi|381151624|ref|ZP_09863493.1| (p)ppGpp synthetase, RelA/SpoT family [Methylomicrobium album BG8]
gi|380883596|gb|EIC29473.1| (p)ppGpp synthetase, RelA/SpoT family [Methylomicrobium album BG8]
Length = 722
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H V A+ LA + ++ + A +LHD ++D +S + F VA+LV+
Sbjct: 53 RKSGEAYICHPVAVAISLAEMRMDANCIMAAILHDVIEDTPISKAELAAEFSPDVAELVD 112
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+++ ++R +A+ + MF+AM D R +++KLADRLHNM TL +P
Sbjct: 113 GVTKLTKIDGISRAE------AQAENVRKMFMAMTRDLRIIMVKLADRLHNMQTLGVMPS 166
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K++R AKETL+I+ PLANRLG++ + LE L F+ + P ++ L + + + + T
Sbjct: 167 EKKRRIAKETLDIYAPLANRLGMNNIQQHLEVLSFEAMYPRRYAILKAAVKKTRGSGLKT 226
Query: 181 SAIEKLEQALKDKNISFLVLC---GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
I +E ++K++ ++C GR K+LYSI+ KM KK+++ +I D+Y R+ V+
Sbjct: 227 --INTVENSVKNRMSQADIVCEVSGREKNLYSIYTKMRHKKISLPDIFDVYAFRICVDTI 284
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY+ + VVH L+ PG+ KDYI PK NGYQSLHT + G G VPLE+QIRT EMH
Sbjct: 285 DDCYRTIGVVHSLYNPKPGRFKDYIALPKANGYQSLHTTLIGPGGVPLEIQIRTHEMHRM 344
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE G AAHW YK D + F + EW + +L Q A
Sbjct: 345 AESGIAAHWLYKSDDDRQEKFQKRANEWLKDILEIQKSA 383
>gi|423321551|ref|ZP_17299422.1| RelA/SpoT family protein [Lactobacillus crispatus FB077-07]
gi|405594489|gb|EKB67900.1| RelA/SpoT family protein [Lactobacillus crispatus FB077-07]
Length = 746
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 196/318 (61%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D + FG VA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVTNDELKEKFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 104 GVTKLNKYEY------KSHQEFLAENHRKMLIAMAQDLRVIMVKLADRLHNMHTLQHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 158 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV
Sbjct: 214 REKYIADTIKTLKKTLNELGIKYEIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++M
Sbjct: 273 KNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEQM 332
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 333 HKVAEYGVAAHWAYKRGN 350
>gi|423350055|ref|ZP_17327708.1| GTP pyrophosphokinase [Turicella otitidis ATCC 51513]
gi|404387964|gb|EJZ83054.1| GTP pyrophosphokinase [Turicella otitidis ATCC 51513]
Length = 748
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 208/341 (60%), Gaps = 16/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A + A IG ++T + A LLHDT++D + + FG A LV+
Sbjct: 60 RKSGDPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTDYTLKQLTDEFGQETARLVD 119
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 120 GVTKLDKVALGA--------AAEAETVRKMVVAMAQDPRVLVIKVADRLHNMRTMRFLPP 171
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K+++ A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + + M
Sbjct: 172 EKQEKKARQTLEVIAPLAHRLGMASIKWELEDLSFAILYPKKYDEIVRLVADRAPQRDKM 231
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +LE +LKD NIS V GR K +SI+ KM + DEI D+ G+R++V+
Sbjct: 232 IKEISSQLEASLKDNNISAEV-QGRPKHYWSIYQKMKVRGHEFDEIFDLIGIRVLVDTVA 290
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + VVH L+ +PG+ KDYI+ P+F YQSLHT V E PLEVQ+RT EMH A
Sbjct: 291 DCYAVIGVVHLLYNPMPGRFKDYISAPRFGVYQSLHTTVMTESGRPLEVQVRTHEMHFNA 350
Query: 299 EFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 336
EFG AAHWRYKE H + V QM W R +L WQ EA
Sbjct: 351 EFGIAAHWRYKETKGTHKGDQAEVDQMA-WMRQLLDWQKEA 390
>gi|365962856|ref|YP_004944422.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365965098|ref|YP_004946663.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn17]
gi|422451696|ref|ZP_16528397.1| GTP diphosphokinase [Propionibacterium acnes HL030PA2]
gi|422501466|ref|ZP_16577720.1| GTP diphosphokinase [Propionibacterium acnes HL063PA2]
gi|422543035|ref|ZP_16618885.1| GTP diphosphokinase [Propionibacterium acnes HL037PA1]
gi|313827636|gb|EFS65350.1| GTP diphosphokinase [Propionibacterium acnes HL063PA2]
gi|314967479|gb|EFT11578.1| GTP diphosphokinase [Propionibacterium acnes HL037PA1]
gi|315108540|gb|EFT80516.1| GTP diphosphokinase [Propionibacterium acnes HL030PA2]
gi|365739537|gb|AEW83739.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365741779|gb|AEW81473.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn17]
Length = 774
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 204/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|395244306|ref|ZP_10421275.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
gi|394483401|emb|CCI82283.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
Length = 748
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/319 (45%), Positives = 197/319 (61%), Gaps = 18/319 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA + + VAAG LHDT++D ++ + I FG VA +V
Sbjct: 43 FRVSGQPYIIHPTQVAGTLATLKLDPDTVAAGYLHDTVEDTPVTNEDIKEKFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLD 116
+GV+KLS++ SKT E AD M +AMA D R +++KLADRLHNM TLD
Sbjct: 103 DGVTKLSKIQ-------YKSKTHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLD 155
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVE 172
L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP+Q+ + SK E
Sbjct: 156 HLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPEQYYRIVNLMQSKRSE 215
Query: 173 CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
E + AI+ L Q L +I + + GR K +YSI+ KM+ K EI+D+ +R+
Sbjct: 216 R--EGYIADAIQILRQTLDSLHIDYEIY-GRPKHIYSIYKKMVNKHKDFSEIYDLLAVRV 272
Query: 233 IVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTK 292
IV++ DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+
Sbjct: 273 IVKSVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKSNGYQSLHTTIIGPGGKPLEIQIRTE 332
Query: 293 EMHLQAEFGFAAHWRYKEG 311
MH AE+G AAHW YKEG
Sbjct: 333 AMHQVAEYGVAAHWAYKEG 351
>gi|422558365|ref|ZP_16634105.1| GTP diphosphokinase [Propionibacterium acnes HL025PA2]
gi|328753279|gb|EGF66895.1| GTP diphosphokinase [Propionibacterium acnes HL025PA2]
Length = 774
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 204/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|289427301|ref|ZP_06429016.1| GTP diphosphokinase [Propionibacterium acnes J165]
gi|354607125|ref|ZP_09025095.1| hypothetical protein HMPREF1003_01662 [Propionibacterium sp.
5_U_42AFAA]
gi|386024111|ref|YP_005942416.1| GTP pyrophosphokinase [Propionibacterium acnes 266]
gi|407935561|ref|YP_006851203.1| GTP pyrophosphokinase [Propionibacterium acnes C1]
gi|417929159|ref|ZP_12572543.1| GTP diphosphokinase [Propionibacterium acnes SK182]
gi|422384764|ref|ZP_16464899.1| GTP diphosphokinase [Propionibacterium acnes HL096PA3]
gi|422388618|ref|ZP_16468721.1| GTP diphosphokinase [Propionibacterium acnes HL096PA2]
gi|422392957|ref|ZP_16473010.1| GTP diphosphokinase [Propionibacterium acnes HL099PA1]
gi|422424630|ref|ZP_16501580.1| GTP diphosphokinase [Propionibacterium acnes HL043PA1]
gi|422430858|ref|ZP_16507737.1| GTP diphosphokinase [Propionibacterium acnes HL072PA2]
gi|422449215|ref|ZP_16525940.1| GTP diphosphokinase [Propionibacterium acnes HL036PA3]
gi|422462028|ref|ZP_16538652.1| GTP diphosphokinase [Propionibacterium acnes HL038PA1]
gi|422474898|ref|ZP_16551362.1| GTP diphosphokinase [Propionibacterium acnes HL056PA1]
gi|422478227|ref|ZP_16554650.1| GTP diphosphokinase [Propionibacterium acnes HL007PA1]
gi|422480763|ref|ZP_16557166.1| GTP diphosphokinase [Propionibacterium acnes HL063PA1]
gi|422483265|ref|ZP_16559654.1| GTP diphosphokinase [Propionibacterium acnes HL036PA1]
gi|422488505|ref|ZP_16564834.1| GTP diphosphokinase [Propionibacterium acnes HL013PA2]
gi|422490606|ref|ZP_16566921.1| GTP diphosphokinase [Propionibacterium acnes HL020PA1]
gi|422498374|ref|ZP_16574646.1| GTP diphosphokinase [Propionibacterium acnes HL002PA3]
gi|422506137|ref|ZP_16582360.1| GTP diphosphokinase [Propionibacterium acnes HL036PA2]
gi|422508247|ref|ZP_16584428.1| GTP diphosphokinase [Propionibacterium acnes HL046PA2]
gi|422513517|ref|ZP_16589640.1| GTP diphosphokinase [Propionibacterium acnes HL087PA2]
gi|422518763|ref|ZP_16594831.1| GTP diphosphokinase [Propionibacterium acnes HL074PA1]
gi|422522018|ref|ZP_16598048.1| GTP diphosphokinase [Propionibacterium acnes HL045PA1]
gi|422527406|ref|ZP_16603396.1| GTP diphosphokinase [Propionibacterium acnes HL083PA1]
gi|422529839|ref|ZP_16605805.1| GTP diphosphokinase [Propionibacterium acnes HL053PA1]
gi|422534482|ref|ZP_16610406.1| GTP diphosphokinase [Propionibacterium acnes HL072PA1]
gi|422537214|ref|ZP_16613102.1| GTP diphosphokinase [Propionibacterium acnes HL078PA1]
gi|422552107|ref|ZP_16627898.1| GTP diphosphokinase [Propionibacterium acnes HL005PA3]
gi|422554043|ref|ZP_16629815.1| GTP diphosphokinase [Propionibacterium acnes HL005PA2]
gi|422560824|ref|ZP_16636511.1| GTP diphosphokinase [Propionibacterium acnes HL005PA1]
gi|422568522|ref|ZP_16644140.1| GTP diphosphokinase [Propionibacterium acnes HL002PA2]
gi|289159500|gb|EFD07689.1| GTP diphosphokinase [Propionibacterium acnes J165]
gi|313771968|gb|EFS37934.1| GTP diphosphokinase [Propionibacterium acnes HL074PA1]
gi|313807661|gb|EFS46148.1| GTP diphosphokinase [Propionibacterium acnes HL087PA2]
gi|313810168|gb|EFS47889.1| GTP diphosphokinase [Propionibacterium acnes HL083PA1]
gi|313818698|gb|EFS56412.1| GTP diphosphokinase [Propionibacterium acnes HL046PA2]
gi|313820468|gb|EFS58182.1| GTP diphosphokinase [Propionibacterium acnes HL036PA1]
gi|313822726|gb|EFS60440.1| GTP diphosphokinase [Propionibacterium acnes HL036PA2]
gi|313825340|gb|EFS63054.1| GTP diphosphokinase [Propionibacterium acnes HL063PA1]
gi|313830499|gb|EFS68213.1| GTP diphosphokinase [Propionibacterium acnes HL007PA1]
gi|313833535|gb|EFS71249.1| GTP diphosphokinase [Propionibacterium acnes HL056PA1]
gi|314925077|gb|EFS88908.1| GTP diphosphokinase [Propionibacterium acnes HL036PA3]
gi|314960386|gb|EFT04488.1| GTP diphosphokinase [Propionibacterium acnes HL002PA2]
gi|314973499|gb|EFT17595.1| GTP diphosphokinase [Propionibacterium acnes HL053PA1]
gi|314976179|gb|EFT20274.1| GTP diphosphokinase [Propionibacterium acnes HL045PA1]
gi|314978562|gb|EFT22656.1| GTP diphosphokinase [Propionibacterium acnes HL072PA2]
gi|314983799|gb|EFT27891.1| GTP diphosphokinase [Propionibacterium acnes HL005PA1]
gi|314987980|gb|EFT32071.1| GTP diphosphokinase [Propionibacterium acnes HL005PA2]
gi|314989790|gb|EFT33881.1| GTP diphosphokinase [Propionibacterium acnes HL005PA3]
gi|315080497|gb|EFT52473.1| GTP diphosphokinase [Propionibacterium acnes HL078PA1]
gi|315085511|gb|EFT57487.1| GTP diphosphokinase [Propionibacterium acnes HL002PA3]
gi|315088432|gb|EFT60408.1| GTP diphosphokinase [Propionibacterium acnes HL072PA1]
gi|315096046|gb|EFT68022.1| GTP diphosphokinase [Propionibacterium acnes HL038PA1]
gi|327326326|gb|EGE68116.1| GTP diphosphokinase [Propionibacterium acnes HL096PA2]
gi|327331799|gb|EGE73536.1| GTP diphosphokinase [Propionibacterium acnes HL096PA3]
gi|327443576|gb|EGE90230.1| GTP diphosphokinase [Propionibacterium acnes HL013PA2]
gi|327448237|gb|EGE94891.1| GTP diphosphokinase [Propionibacterium acnes HL043PA1]
gi|328753331|gb|EGF66947.1| GTP diphosphokinase [Propionibacterium acnes HL020PA1]
gi|328760712|gb|EGF74278.1| GTP diphosphokinase [Propionibacterium acnes HL099PA1]
gi|332675569|gb|AEE72385.1| GTP pyrophosphokinase [Propionibacterium acnes 266]
gi|340773282|gb|EGR95774.1| GTP diphosphokinase [Propionibacterium acnes SK182]
gi|353557240|gb|EHC26609.1| hypothetical protein HMPREF1003_01662 [Propionibacterium sp.
5_U_42AFAA]
gi|407904142|gb|AFU40972.1| GTP pyrophosphokinase [Propionibacterium acnes C1]
gi|456739915|gb|EMF64454.1| GTP pyrophosphokinase [Propionibacterium acnes FZ1/2/0]
Length = 774
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 204/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|335051392|ref|ZP_08544312.1| GTP diphosphokinase [Propionibacterium sp. 409-HC1]
gi|333766726|gb|EGL44010.1| GTP diphosphokinase [Propionibacterium sp. 409-HC1]
Length = 774
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 204/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|397737388|ref|ZP_10504060.1| GTP 3'-pyrophosphotransferase [Rhodococcus sp. JVH1]
gi|396926827|gb|EJI94064.1| GTP 3'-pyrophosphotransferase [Rhodococcus sp. JVH1]
Length = 791
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 206/340 (60%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 104 RKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEQLTDEFGEEVAHLVD 163
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 164 GVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 215
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 216 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEIVRLVADRAPSRDTY 275
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ L I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 276 LAKVRAEINATLTASRIN-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEVR 334
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT +MH A
Sbjct: 335 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTHDMHRTA 394
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
EFG AAHWRYKE +HS V ++ + W R +L WQ EA
Sbjct: 395 EFGIAAHWRYKETKGRHSGDVAEVDDMAWMRQLLDWQREA 434
>gi|296393867|ref|YP_003658751.1| (p)ppGpp synthetase I [Segniliparus rotundus DSM 44985]
gi|296181014|gb|ADG97920.1| (p)ppGpp synthetase I, SpoT/RelA [Segniliparus rotundus DSM 44985]
Length = 797
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 211/342 (61%), Gaps = 16/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++ + A LLHDT++D S + + R FG+ VA +V
Sbjct: 108 FRRSGDPYITHPLAVAHILAELGMDTLSLVAALLHDTVEDTGYSLEELERDFGSDVAHIV 167
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ T EA+ + M +AMA D R ++IK+ADRLHNM T+ +P
Sbjct: 168 DGVTKLDKV--------TWGAGAEAETIRKMVIAMARDPRVLVIKVADRLHNMRTMRFMP 219
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
K+ R A+ETLE+ PLA+RLG+++ K +LE+L F L+P ++ E+ +LV +
Sbjct: 220 PEKQVRKAQETLEVIAPLAHRLGMASVKWELEDLAFAVLHPKKYAEIV-RLVADRAPSRD 278
Query: 180 TSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
T + +++ L+ SF V + GR K +SI+ KM+ K D+IHD+ GLR++
Sbjct: 279 TY-LARVKSELQSALSSFRVDAEVAGRPKHYWSIYQKMIVKGRDFDDIHDLVGLRIVCGE 337
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY A+ VVH LW +PG+ KDYI +P++ YQSLHT V G PLEVQ+RT+EMH
Sbjct: 338 VRDCYAAVGVVHSLWQPLPGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQLRTQEMHR 397
Query: 297 QAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE G + + + W R +L WQ EA
Sbjct: 398 VAEFGIAAHWRYKENKGKVGSDAAEVDRMAWMRQLLDWQREA 439
>gi|392394513|ref|YP_006431115.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525591|gb|AFM01322.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 726
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 206/340 (60%), Gaps = 11/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y+ H +E A +L+ + + +AA LHD ++D + + I R FG+ VA LV
Sbjct: 36 LRNSGEEYIQHPLEVAKILSELEMDEATIAAAFLHDVVEDTKYTIEDIEREFGSQVAILV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E ++ + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 96 DGVTKLGRIEYKSKEE------LQVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKFHS 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++ A+ETLEIF PLANRLGI K +LE+L F++L P ++ +LS L E
Sbjct: 150 EKKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLKPQEYYDLSEGIALKRAEREV 209
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L + L + I + GR K YSI+ KM+ + + EI+D+ +R+IV++
Sbjct: 210 QINEVITQLSKRLTEVGIKADI-SGRPKHFYSIYRKMITQHRELSEIYDLTAVRVIVDSV 268
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL ++H +W +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 269 NDCYGALGIIHTMWKPLPGRFKDYIAMPKPNMYQSLHTTLVGAHGEPFEIQIRTWEMHRT 328
Query: 298 AEFGFAAHWRYKEGDCQH-SSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YKEG + Q + W R +L WQ ++
Sbjct: 329 AEYGIAAHWKYKEGAGKPVGGNFEQKLSWLRQLLEWQHDS 368
>gi|50842646|ref|YP_055873.1| GTP pyrophosphokinase [Propionibacterium acnes KPA171202]
gi|289425156|ref|ZP_06426933.1| GTP diphosphokinase [Propionibacterium acnes SK187]
gi|335055041|ref|ZP_08547835.1| GTP diphosphokinase [Propionibacterium sp. 434-HC2]
gi|342211740|ref|ZP_08704465.1| GTP diphosphokinase [Propionibacterium sp. CC003-HC2]
gi|387503540|ref|YP_005944769.1| GTP pyrophosphokinase [Propionibacterium acnes 6609]
gi|422438217|ref|ZP_16515061.1| GTP diphosphokinase [Propionibacterium acnes HL092PA1]
gi|422457221|ref|ZP_16533883.1| GTP diphosphokinase [Propionibacterium acnes HL030PA1]
gi|422493438|ref|ZP_16569738.1| GTP diphosphokinase [Propionibacterium acnes HL086PA1]
gi|422495646|ref|ZP_16571933.1| GTP diphosphokinase [Propionibacterium acnes HL025PA1]
gi|422524246|ref|ZP_16600255.1| GTP diphosphokinase [Propionibacterium acnes HL053PA2]
gi|422532216|ref|ZP_16608162.1| GTP diphosphokinase [Propionibacterium acnes HL110PA1]
gi|50840248|gb|AAT82915.1| GTP pyrophosphokinase [Propionibacterium acnes KPA171202]
gi|289154134|gb|EFD02822.1| GTP diphosphokinase [Propionibacterium acnes SK187]
gi|313792000|gb|EFS40101.1| GTP diphosphokinase [Propionibacterium acnes HL110PA1]
gi|313812804|gb|EFS50518.1| GTP diphosphokinase [Propionibacterium acnes HL025PA1]
gi|313838871|gb|EFS76585.1| GTP diphosphokinase [Propionibacterium acnes HL086PA1]
gi|315077872|gb|EFT49923.1| GTP diphosphokinase [Propionibacterium acnes HL053PA2]
gi|315105673|gb|EFT77649.1| GTP diphosphokinase [Propionibacterium acnes HL030PA1]
gi|327453281|gb|EGE99935.1| GTP diphosphokinase [Propionibacterium acnes HL092PA1]
gi|333763083|gb|EGL40553.1| GTP diphosphokinase [Propionibacterium sp. 434-HC2]
gi|335277585|gb|AEH29490.1| GTP pyrophosphokinase [Propionibacterium acnes 6609]
gi|340767284|gb|EGR89809.1| GTP diphosphokinase [Propionibacterium sp. CC003-HC2]
Length = 774
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 204/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|58337233|ref|YP_193818.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
gi|58254550|gb|AAV42787.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
Length = 746
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 200/318 (62%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + +AAG LHDT++D ++ D + FG VA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHDTVEDTPVTNDELKEKFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ E N+ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 104 GVTKLNKY-----EYNSHQEFL-AENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 158 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E ++ I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV
Sbjct: 214 REKYISDTIKTLKKTLDELGIKYDIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++M
Sbjct: 273 KNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEQM 332
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 333 HEVAEYGVAAHWAYKRGN 350
>gi|387136696|ref|YP_005692676.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 42/02-A]
gi|348607141|gb|AEP70414.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 42/02-A]
Length = 746
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 57 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLEDLTRDFGEEVARLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ LP
Sbjct: 117 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLP 168
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 169 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEVVRLVADRAPSRDR 228
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +L+QALK+ +I V+ GR K +SI+ KM+ + ++I D+ G+R++V++
Sbjct: 229 YLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDIFDLVGIRILVDSI 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ PLEVQ+RT EMH
Sbjct: 288 NNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKPLEVQVRTHEMHFN 347
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 AEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 388
>gi|313893200|ref|ZP_07826777.1| GTP diphosphokinase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442553|gb|EFR60968.1| GTP diphosphokinase [Veillonella sp. oral taxon 158 str. F0412]
Length = 742
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 205/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A +LA + + + A L+HD ++D + + + + FG+ VA LV
Sbjct: 57 FRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYTKEDLEKMFGSEVAFLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 117 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMR 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E
Sbjct: 171 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVRED 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V + +L +AL + NI + GR K YSI+ KM K + +I+D+ +R+IV+
Sbjct: 231 IVNDTMSQLTKALGEANIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTI 289
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H LW +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 290 PDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 349
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 350 SEYGVAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 385
>gi|427723832|ref|YP_007071109.1| (p)ppGpp synthetase I SpoT/RelA [Leptolyngbya sp. PCC 7376]
gi|427355552|gb|AFY38275.1| (p)ppGpp synthetase I, SpoT/RelA [Leptolyngbya sp. PCC 7376]
Length = 749
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 208/340 (61%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG PY+ H V A LL +G NS ++AAG LHD ++D ++ + I FG V LVE
Sbjct: 56 RKSGRPYIEHPVAVAGLLRDLGGNSAMIAAGFLHDVVEDTDVTPEEIEEHFGEEVRQLVE 115
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL++ + +SKT +A+ MFL+MA D R +++KLADRLHNM TL+ L
Sbjct: 116 GVTKLTKFT-------FSSKTERQAENFRRMFLSMAEDIRVIVVKLADRLHNMRTLEPLR 168
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A ET EIF PLANRLGI +K +LE+LCFK+L + + + E EA
Sbjct: 169 PDKQKRIALETKEIFAPLANRLGIWRFKWELEDLCFKYLESEAFRAMQDHISEKRAEREA 228
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V AI+ + L + + GR K LYSI+ KM ++ DEI DI G+R+IVE+
Sbjct: 229 RVNEAIDIVRDRLHKLKLHVWEIKGRPKHLYSIYDKMQRQHKEFDEIFDISGIRVIVEST 288
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+AL V+H + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 289 DECYRALAVIHDAFKPIPGRFKDYIGLPKPNRYQSLHTTVVGLNGRPLEVQIRTMEMHHI 348
Query: 298 AEFGFAAHWRYKEGDCQHSSF--VLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE ++S + W R +L WQ +
Sbjct: 349 AEYGIAAHWKYKEVGHSNASISSTDEKFTWLRQLLEWQSD 388
>gi|54025654|ref|YP_119896.1| ppGpp synthetase [Nocardia farcinica IFM 10152]
gi|54017162|dbj|BAD58532.1| putative ppGpp synthetase [Nocardia farcinica IFM 10152]
Length = 798
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 209/341 (61%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D + FG VA LV
Sbjct: 110 FRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYTLDQLRAEFGDEVAHLV 169
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 170 DGVTKLDKVNLGA--------AAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 221
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + AKETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 222 PEKQAKKAKETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYDEIVRLVADRAPSRDT 281
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 282 YLAKVRAEIVNTLAASRIN-AVVEGRPKHYWSIYQKMIVKGKDFDDIHDLVGIRILCDEV 340
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT +MH
Sbjct: 341 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPDGKPLEVQIRTHDMHRT 400
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
AEFG AAHWRYKE +HS + ++ + W R +L WQ EA
Sbjct: 401 AEFGIAAHWRYKETKGKHSGDLAEVDDMAWMRQLLDWQREA 441
>gi|336421845|ref|ZP_08602000.1| hypothetical protein HMPREF0993_01377 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009694|gb|EGN39685.1| hypothetical protein HMPREF0993_01377 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 781
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 220/346 (63%), Gaps = 13/346 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + +G+LHD ++D +S + I R FG VA LV+
Sbjct: 83 RKSGEPYIVHPLWVAIILADLEMDKETIVSGMLHDVVEDTEVSEEDIKREFGEEVALLVD 142
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +LS ++ V+A+ L MFLAMA D R ++IKLADRLHNM TL+ +
Sbjct: 143 GVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTP 197
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K++ AKET++I+ P+A RLGIS K +L++L K+ P+ +L +++ + E
Sbjct: 198 AKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFFDLVNQINARKTEREEF 257
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V ++++ +K+ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV++ +
Sbjct: 258 VQQIVDEVSTHMKNASIKADV-NGRVKHFFSIYKKMVNQDKTVDQVYDLFAVRIIVDSVK 316
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P E+QIRT+EMH A
Sbjct: 317 DCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQPFEIQIRTQEMHKTA 376
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDR 341
E+G AAHW+YKE + S Q E W R +L WQ + MS +R
Sbjct: 377 EYGIAAHWKYKESNDGKKSVEAQEEEKLSWLRQILEWQRD-MSDNR 421
>gi|419421340|ref|ZP_13961568.1| GTP pyrophosphokinase [Propionibacterium acnes PRP-38]
gi|422396586|ref|ZP_16476617.1| GTP diphosphokinase [Propionibacterium acnes HL097PA1]
gi|327330397|gb|EGE72146.1| GTP diphosphokinase [Propionibacterium acnes HL097PA1]
gi|379977831|gb|EIA11156.1| GTP pyrophosphokinase [Propionibacterium acnes PRP-38]
Length = 774
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 204/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|365974032|ref|YP_004955591.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn33]
gi|422427939|ref|ZP_16504850.1| GTP diphosphokinase [Propionibacterium acnes HL087PA1]
gi|422433331|ref|ZP_16510199.1| GTP diphosphokinase [Propionibacterium acnes HL059PA2]
gi|422435890|ref|ZP_16512747.1| GTP diphosphokinase [Propionibacterium acnes HL083PA2]
gi|422443695|ref|ZP_16520493.1| GTP diphosphokinase [Propionibacterium acnes HL002PA1]
gi|422445869|ref|ZP_16522616.1| GTP diphosphokinase [Propionibacterium acnes HL027PA1]
gi|422454300|ref|ZP_16530980.1| GTP diphosphokinase [Propionibacterium acnes HL087PA3]
gi|422510504|ref|ZP_16586650.1| GTP diphosphokinase [Propionibacterium acnes HL059PA1]
gi|422539308|ref|ZP_16615181.1| GTP diphosphokinase [Propionibacterium acnes HL013PA1]
gi|422547962|ref|ZP_16623778.1| GTP diphosphokinase [Propionibacterium acnes HL050PA3]
gi|422562921|ref|ZP_16638598.1| GTP diphosphokinase [Propionibacterium acnes HL046PA1]
gi|422570085|ref|ZP_16645692.1| GTP diphosphokinase [Propionibacterium acnes HL067PA1]
gi|422578538|ref|ZP_16654062.1| GTP diphosphokinase [Propionibacterium acnes HL005PA4]
gi|313764313|gb|EFS35677.1| GTP diphosphokinase [Propionibacterium acnes HL013PA1]
gi|313815851|gb|EFS53565.1| GTP diphosphokinase [Propionibacterium acnes HL059PA1]
gi|314915303|gb|EFS79134.1| GTP diphosphokinase [Propionibacterium acnes HL005PA4]
gi|314920223|gb|EFS84054.1| GTP diphosphokinase [Propionibacterium acnes HL050PA3]
gi|314931746|gb|EFS95577.1| GTP diphosphokinase [Propionibacterium acnes HL067PA1]
gi|314955647|gb|EFT00049.1| GTP diphosphokinase [Propionibacterium acnes HL027PA1]
gi|314958043|gb|EFT02146.1| GTP diphosphokinase [Propionibacterium acnes HL002PA1]
gi|315098675|gb|EFT70651.1| GTP diphosphokinase [Propionibacterium acnes HL059PA2]
gi|315101322|gb|EFT73298.1| GTP diphosphokinase [Propionibacterium acnes HL046PA1]
gi|327450641|gb|EGE97295.1| GTP diphosphokinase [Propionibacterium acnes HL087PA3]
gi|327454021|gb|EGF00676.1| GTP diphosphokinase [Propionibacterium acnes HL083PA2]
gi|328754059|gb|EGF67675.1| GTP diphosphokinase [Propionibacterium acnes HL087PA1]
gi|365744031|gb|AEW79228.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn33]
Length = 774
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 204/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|312139501|ref|YP_004006837.1| gtp diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-diphosphatase [Rhodococcus equi 103S]
gi|325672609|ref|ZP_08152305.1| GTP diphosphokinase [Rhodococcus equi ATCC 33707]
gi|311888840|emb|CBH48152.1| GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-diphosphatase [Rhodococcus equi 103S]
gi|325556486|gb|EGD26152.1| GTP diphosphokinase [Rhodococcus equi ATCC 33707]
Length = 778
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 208/341 (60%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV
Sbjct: 90 FRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLEELTAEFGDEVAHLV 149
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 150 DGVTKLDKV--------VLGSAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 201
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 202 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 261
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 262 YLAKVRAEINATLSASRIN-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEI 320
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 321 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTRDMHRT 380
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
AEFG AAHWRYKE +HS+ + ++ + W R +L WQ EA
Sbjct: 381 AEFGIAAHWRYKETKGKHSNDIAEVDDMAWMRQLLDWQREA 421
>gi|227879058|ref|ZP_03996948.1| GTP diphosphokinase [Lactobacillus crispatus JV-V01]
gi|256843052|ref|ZP_05548540.1| ppGpp synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256850296|ref|ZP_05555725.1| ppGpp synthetase [Lactobacillus crispatus MV-1A-US]
gi|262046025|ref|ZP_06018989.1| ppGpp synthetase [Lactobacillus crispatus MV-3A-US]
gi|293381310|ref|ZP_06627313.1| GTP diphosphokinase [Lactobacillus crispatus 214-1]
gi|312977236|ref|ZP_07788984.1| GTP diphosphokinase [Lactobacillus crispatus CTV-05]
gi|423318875|ref|ZP_17296752.1| RelA/SpoT family protein [Lactobacillus crispatus FB049-03]
gi|227861353|gb|EEJ68982.1| GTP diphosphokinase [Lactobacillus crispatus JV-V01]
gi|256614472|gb|EEU19673.1| ppGpp synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256712933|gb|EEU27925.1| ppGpp synthetase [Lactobacillus crispatus MV-1A-US]
gi|260573984|gb|EEX30540.1| ppGpp synthetase [Lactobacillus crispatus MV-3A-US]
gi|290922126|gb|EFD99125.1| GTP diphosphokinase [Lactobacillus crispatus 214-1]
gi|310895667|gb|EFQ44733.1| GTP diphosphokinase [Lactobacillus crispatus CTV-05]
gi|405591738|gb|EKB65207.1| RelA/SpoT family protein [Lactobacillus crispatus FB049-03]
Length = 746
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 196/318 (61%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D + FG VA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVTNDELKEKFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 104 GVTKLNKYEY------KSHQEFLAENHRKMLIAMAQDLRVIMVKLADRLHNMHTLQHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 158 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV
Sbjct: 214 REKYIADTIKTLKKTLNELGIKYEIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++M
Sbjct: 273 KNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEQM 332
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 333 HKVAEYGVAAHWAYKRGN 350
>gi|422516400|ref|ZP_16592509.1| GTP diphosphokinase [Propionibacterium acnes HL110PA2]
gi|422545278|ref|ZP_16621108.1| GTP diphosphokinase [Propionibacterium acnes HL082PA1]
gi|313802050|gb|EFS43284.1| GTP diphosphokinase [Propionibacterium acnes HL110PA2]
gi|314962656|gb|EFT06756.1| GTP diphosphokinase [Propionibacterium acnes HL082PA1]
Length = 774
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 204/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|429762033|ref|ZP_19294440.1| GTP diphosphokinase [Anaerostipes hadrus DSM 3319]
gi|429182579|gb|EKY23677.1| GTP diphosphokinase [Anaerostipes hadrus DSM 3319]
Length = 765
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/336 (40%), Positives = 213/336 (63%), Gaps = 10/336 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D +++ I R FG VA LV+
Sbjct: 64 RKSGEPYIIHPICVAIILAELELDKETIMAGLLHDVVEDTETTHEDIVRDFGEEVAQLVD 123
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS + V+A+ L MFLAMA D R +LIKLADRLHNM T+ +
Sbjct: 124 GVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMRP 178
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD + +L L +E A
Sbjct: 179 EKQKEKSRETMDIYAPIAHRLGISKIKVELDDLALRYLKPDVYEDLERSLDSAKEEREAF 238
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +++++ + I + GR K ++SI+ KM+ + T+D+I+D++ +R+ V+ +
Sbjct: 239 IQEIVDEVKGHIDRAGIKAEI-DGRVKHMFSIYKKMVNQHKTIDQIYDLFAVRIKVDTVK 297
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 298 DCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEGHPFEIQIRTFEMHRVA 357
Query: 299 EFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQ 333
E+G AAHW+YKE + + + + W R VL WQ
Sbjct: 358 EYGIAAHWKYKENNNTKGLNKEEEKLSWLREVLEWQ 393
>gi|313895497|ref|ZP_07829053.1| GTP diphosphokinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|320528880|ref|ZP_08029972.1| GTP diphosphokinase [Selenomonas artemidis F0399]
gi|402302377|ref|ZP_10821491.1| GTP diphosphokinase [Selenomonas sp. FOBRC9]
gi|312975623|gb|EFR41082.1| GTP diphosphokinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|320138510|gb|EFW30400.1| GTP diphosphokinase [Selenomonas artemidis F0399]
gi|400380596|gb|EJP33410.1| GTP diphosphokinase [Selenomonas sp. FOBRC9]
Length = 742
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 206/339 (60%), Gaps = 13/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + A +L + + + A LLHD ++D + + + FG +A L++
Sbjct: 46 RISGEAYIIHPLHVAYILTGLHMDDETICAALLHDVVEDTHATIEEMEELFGKNIAVLID 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 106 GVTKLGRIQYMSKED------VQLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMRE 159
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
KRQR A ETLE++ PLANRLGIS K++LE+LC ++L PD + L ++ E A
Sbjct: 160 DKRQRIAHETLEVYAPLANRLGISNIKIELEDLCLRYLEPDAYYALVEEVKHKRRERQAF 219
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +I ++ + L+D I + GR K YSI+ KM + ++ EI+D+ +R++V + +
Sbjct: 220 ILDSIRQIREKLEDAGIEAEI-KGRAKHFYSIYRKMKRDNKSVSEIYDLSAVRVLVSSVK 278
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L V+H +W +PG+ KDYI PK NGYQSLHT V +G PLE+QIRT MH +
Sbjct: 279 DCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTQG-DPLEIQIRTHAMHRVS 337
Query: 299 EFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 335
EFG AAHW+YKE Q + W R +++ Q E
Sbjct: 338 EFGVAAHWKYKESGKSIGAGGAADQKMSWLRQMVSLQKE 376
>gi|443673223|ref|ZP_21138292.1| GTP pyrophosphokinase/guanosine-3',5'-bis (Diphosphate)
3-pyrophosphohydrolase [Rhodococcus sp. AW25M09]
gi|443414186|emb|CCQ16630.1| GTP pyrophosphokinase/guanosine-3',5'-bis (Diphosphate)
3-pyrophosphohydrolase [Rhodococcus sp. AW25M09]
Length = 824
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 206/341 (60%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SGDPY+ H + A +LA +G ++T + A LLHDT++D S + FG V+ LV
Sbjct: 136 MRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLAKLTEEFGDEVSHLV 195
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 196 DGVTKLDKV--------VLGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 247
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R AKETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 248 PEKQARKAKETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYDEIVRLVADRAPSRDT 307
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L IS V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 308 YLEKVRAEINATLSASRIS-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEI 366
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 367 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTRDMHRT 426
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
AEFG AAHWRYKE +HS ++ + W R +L WQ EA
Sbjct: 427 AEFGIAAHWRYKETKGRHSQDNTEVDDMAWMRQLLDWQREA 467
>gi|407280047|ref|ZP_11108517.1| gtp diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-diphosphatase [Rhodococcus sp. P14]
Length = 743
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 204/341 (59%), Gaps = 16/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 56 RKSGDPYITHPLAVATILAELGMDTTTLIAALLHDTVEDTGYSLEQLTAEFGEEVAHLVD 115
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 116 GVTKLDKV--------VLGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 167
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC---FDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ +LV +
Sbjct: 168 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIV-RLVATRAPSRDT 226
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L I V GR K +SI+ KM+ K D+IHD+ G+R++
Sbjct: 227 YLAKVRAEINSTLSASRIEATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCNEI 285
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT+EMH
Sbjct: 286 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTREMHRT 345
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
AEFG AAHWRYKE +HS ++ + W R +L WQ EA
Sbjct: 346 AEFGIAAHWRYKETKGKHSGDAAELDDMAWMRQLLDWQREA 386
>gi|206890423|ref|YP_002248838.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742361|gb|ACI21418.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 702
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 199/312 (63%), Gaps = 10/312 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R G PY+ H + A +LA + +ST +AAGLLHDT++DA ++ D I F VA LV+
Sbjct: 39 RKEGIPYIYHPLAVAAILADMKLDSTTIAAGLLHDTVEDAEMTIDDIGEIFTPDVAFLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
V+KLS+L + + +A+ MFLAM+ D R +LIK ADRLHNM T++ LP
Sbjct: 99 AVTKLSKL------QFSTVEEAQAESFRKMFLAMSKDIRVILIKFADRLHNMRTIEFLPP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++R AKETLEI+ PLANRLGI + + E+L FK L PD++ +L K+ + + +A
Sbjct: 153 DKQKRIAKETLEIYAPLANRLGIGWMRSEFEDLSFKVLYPDEYDDLVKKVAKRKEDQQAY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + I L + + NI F + GR K Y I+ K++K+K+ ++++D+ G+R+I +
Sbjct: 213 IDNVINILSEKISAMNIPFKIY-GRVKHYYGIYQKLIKQKIPFEQVYDVIGIRIITDTVP 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY L ++H LW +PG+ KD+I+ PK N YQSLHT V G G +E QIRT+EM + A
Sbjct: 272 HCYDILGIIHSLWTLIPGRFKDFISLPKSNYYQSLHTTVIGPGGERVEFQIRTEEMDIIA 331
Query: 299 EFGFAAHWRYKE 310
E G AAHWRYKE
Sbjct: 332 EEGIAAHWRYKE 343
>gi|256371735|ref|YP_003109559.1| (p)ppGpp synthetase I SpoT/RelA [Acidimicrobium ferrooxidans DSM
10331]
gi|256008319|gb|ACU53886.1| (p)ppGpp synthetase I, SpoT/RelA [Acidimicrobium ferrooxidans DSM
10331]
Length = 721
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/314 (45%), Positives = 201/314 (64%), Gaps = 10/314 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A +A + A+ VAA LLHDT++D +S + + + FGA VA LV
Sbjct: 32 LRRSGEPYIVHPLAVARRVAELRADPITVAAALLHDTVEDTSISLEELEQRFGAEVAALV 91
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+G +KL +LS ++E +A + M +AMA D R ++IKLADRLHNM T+ AL
Sbjct: 92 DGATKLDRLSFDSKE------VAQAATMRKMLIAMARDVRVLVIKLADRLHNMQTIGALG 145
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEA 177
K++R A ET++I+ PLA+RLGI K QLE+ F L+P ++ E+ + + EA
Sbjct: 146 REKQRRIAHETMDIYAPLAHRLGIEEVKWQLEDHAFAVLHPRRYAEMEHLVSQRAPEREA 205
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + E+L L I V R K ++SI+ KM+ + D I+DI G+R+I E
Sbjct: 206 RLQAVSEQLAAKLAQVGIVAEV-TARPKHVWSIYEKMVLRGKEFDAIYDILGVRIITHEE 264
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DC+ AL V+H LWA +PG+ KDYI PKFN YQSLHT V EG PLEVQ+RT+EMHL+
Sbjct: 265 RDCWAALGVIHSLWAPIPGRFKDYINAPKFNLYQSLHTTVVLEGGSPLEVQVRTREMHLR 324
Query: 298 AEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 325 AEYGVAAHWGYKEG 338
>gi|291278481|ref|YP_003495316.1| GTP pyrophosphokinase [Deferribacter desulfuricans SSM1]
gi|290753183|dbj|BAI79560.1| GTP pyrophosphokinase [Deferribacter desulfuricans SSM1]
Length = 710
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 222/375 (59%), Gaps = 33/375 (8%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H + A +LA + + V AGLLHDTL+D +Y+ + FG VA LV
Sbjct: 43 LRKSGEPYLSHPLNVAYILAEMNMDLDTVVAGLLHDTLEDTDATYEELVNLFGEDVAFLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GVSK+ ++ N + + +A+ M ++M+ D R ++IKLADRLHNM T++ LP
Sbjct: 103 DGVSKIGKI------NFKSHEEKQAEAFRKMLISMSKDIRVIVIKLADRLHNMRTINFLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEA 177
K++R AKETLEI+ PLA+RLGI+ K +LE+L F+ LNP+ + ++ +K L E
Sbjct: 157 EEKKKRIAKETLEIYAPLAHRLGIAWIKWELEDLSFRILNPEAYYDIYNKVKLKRSEREQ 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +++ L+ + I V GR K YSI+ KM++KK + DEI+D+ LR++V
Sbjct: 217 YLKEVINIVKEVLEKEGIKAEV-TGRPKHFYSIYTKMIRKKTSFDEIYDLLALRVLVNTV 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY L ++H LW + G++KDYI PK N YQSLHT V G + +E QIRT EMH
Sbjct: 276 GECYAVLGIIHNLWKPIQGRIKDYIAMPKSNMYQSLHTTVIGPRGMKVEFQIRTYEMHRI 335
Query: 298 AEFGFAAHWRYKEGDC----QHSSFVLQMVEWARWVLTWQ--------CEAMSKDRSCVG 345
AE G AAHW+YKEG + ++F+ W R +L + EA+ +D +
Sbjct: 336 AEEGIAAHWKYKEGKVFDPKEDTTFI-----WLRQLLEQKDLKDPKEFVEALKEDVLPIQ 390
Query: 346 ------NGDSIKPPC 354
NGD ++ P
Sbjct: 391 IYVFTPNGDIVELPV 405
>gi|429735228|ref|ZP_19269197.1| GTP diphosphokinase [Selenomonas sp. oral taxon 138 str. F0429]
gi|429159340|gb|EKY01855.1| GTP diphosphokinase [Selenomonas sp. oral taxon 138 str. F0429]
Length = 743
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 208/340 (61%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGD Y++H + A +L + + + A LLHD ++D + + + FG + L+
Sbjct: 45 VRISGDAYIIHPLNVAYILTGLHLDDETICAALLHDVVEDTCATLEEMEAEFGKNIMALI 104
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 105 DGVTKLGRIEYMSKED------VQLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
KRQR AKETLE++ PLANRLGIS KV+LE+LC ++L P+ + L ++ E
Sbjct: 159 EDKRQRIAKETLEVYAPLANRLGISNIKVELEDLCLRYLEPEAYYTLVEEVKHKRKERQE 218
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +IE++ + L+ I + GR K YSI+ KM + +++EI+D+ +R++V +
Sbjct: 219 FIRESIEQIREKLEAAGIKAEI-KGRAKHFYSIYRKMKRDNKSVNEIYDLSAVRVLVSSV 277
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G PLE+QIRTK MH
Sbjct: 278 KDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHGY-PLEIQIRTKAMHQV 336
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 335
+EFG AAHW+YKE + Q + W R +++ Q E
Sbjct: 337 SEFGVAAHWKYKEAGRSIGATDENDQKMSWLRQMVSLQKE 376
>gi|418051193|ref|ZP_12689278.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium rhodesiae JS60]
gi|353184850|gb|EHB50374.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium rhodesiae JS60]
Length = 783
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 209/345 (60%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FG VA LV
Sbjct: 91 LRRSGDPYITHPLAVANILAELGMDTTALVAALLHDTVEDTGYAMEALTADFGEEVAHLV 150
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 151 DGVTKLDKVA--------LGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 202
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 203 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDT 262
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ AL IS V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 263 YLAKVRAEITSALSGMKISATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEI 321
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PLEVQIRT++MH
Sbjct: 322 RDCYAAVGVVHSLWQPMPGRFKDYIAQPRFGVYQSLHTTVVGPEGKPLEVQIRTRDMHDT 381
Query: 298 AEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE + +++ + + W R +L WQ EA
Sbjct: 382 AEFGIAAHWRYKESKGRNGLPAGYTAAEIDDMAWMRQLLDWQREA 426
>gi|452202850|ref|YP_007482983.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi DCMB5]
gi|452109909|gb|AGG05641.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi DCMB5]
Length = 728
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/346 (43%), Positives = 211/346 (60%), Gaps = 22/346 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+P++ H + AM LA + ++ ++A LLHD +DA +S + I + FGA VA LV
Sbjct: 37 MRKSGEPFIEHPLNVAMTLADLQLDAATLSAALLHDVPEDANISLEQIDKKFGADVAKLV 96
Query: 61 EGVSKLSQLS-----KLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 114
+GV+KLS+L+ + AR + +A+ L M +AMA D R V IKLADR HNM T
Sbjct: 97 DGVTKLSKLALGPAIEDARRPGGNASLRQAENLRKMLVAMAEDLRVVFIKLADRFHNMRT 156
Query: 115 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKL 170
L AL KR+ AKET+EI+ PLA+RLGI K QLE+L F++L+P + +++ SKL
Sbjct: 157 LQALSPEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKL 216
Query: 171 VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK---KKLTMDEIHDI 227
+ + SAI L+ K ++ V GR K LYSI+ KM K + ++I+D+
Sbjct: 217 AQRQNYLEHVSAI--LQGEFKKNGLNVEV-SGRPKHLYSIYQKMEKYASQGKQFEDIYDV 273
Query: 228 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEV 287
LR++V + DCY A+ +VH LW +PG DYI PK NGYQSLHT V G PLEV
Sbjct: 274 LALRVLVNDIPDCYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSLGTTPLEV 333
Query: 288 QIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF------VLQMVEWAR 327
Q+RT +MH AE+G AAHWRYK + +F + Q++EW R
Sbjct: 334 QVRTYQMHHIAEYGVAAHWRYKTAGKEDVNFEDRIGWLRQLIEWHR 379
>gi|442770988|gb|AGC71687.1| GTP pyrophosphokinase ppGpp synthetase I [uncultured bacterium
A1Q1_fos_300]
Length = 716
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/453 (36%), Positives = 239/453 (52%), Gaps = 54/453 (11%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A LA +G + VV AGLLHD L+D F+ +Y+ + FG + LVE
Sbjct: 90 RLSGEPYIIHPLAVAHTLADLGLDHEVVCAGLLHDVLEDTFIKPEYMRQEFGETITYLVE 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALPL 120
V+K+S L EN +A + M +A + D+R +LIKLAD+LHNM TL
Sbjct: 150 SVTKISVLKTQTAENK------QAINIRKMIMATIRDSRVILIKLADKLHNMRTLGFHST 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K + A+E LEI+ PLA RLGI K +LE+L HL+ + + K+ E +
Sbjct: 204 NKGMQIAREVLEIYAPLAGRLGIYKIKSELEDLALYHLDRTTYALIKDKIAEKKGQRDGR 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + L Q LK+ I V GR K YSI+ KM+++K + ++I+D+ G+R++V
Sbjct: 264 VAMVMSLLTQHLKESKIKATV-EGRSKHFYSIYNKMIEQKKSFEDIYDLTGVRVLVNEVP 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW +PG+ KDYI+ PK NGYQSLHT V G G P+EVQIRT +MH +
Sbjct: 323 DCYTVLGLVHTLWTPIPGRFKDYISVPKSNGYQSLHTTVIGPGGQPIEVQIRTWKMHRVS 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPS 358
EFG A+HW YKE ++F Q L Q A+S D V +GD + + S
Sbjct: 383 EFGIASHWAYKEKPGDQATFETQF-------LDLQNMAISDDE--VDSGDFYQELVSNLS 433
Query: 359 HADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFP 418
A++ S G +F + P +STV+D + F
Sbjct: 434 QANEVYI-----ISPKGKIFTM------------PENSTVLD--------------FAFR 462
Query: 419 LKEELRPRLNHKAVGDP----RCKLKMGDVVEL 447
+ ++ R +GD R LK GD +E+
Sbjct: 463 IHTDIGLRCAGAKIGDRLVSIRTPLKNGDQIEI 495
>gi|378549163|ref|ZP_09824379.1| hypothetical protein CCH26_03720 [Citricoccus sp. CH26A]
Length = 803
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 201/336 (59%), Gaps = 13/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H V A +LA +G T +A LLHDT++D S + + R FG VA LV+
Sbjct: 116 RKSGDPYITHPVAVATILAELGMTGTTLAGALLHDTVEDTSYSLEQLRRDFGDEVAHLVD 175
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +A+ + M LAMAD R ++IKLADRLHN T +
Sbjct: 176 GVTKLDKVK--------FGDAAQAETVRKMVLAMADDVRVLVIKLADRLHNARTWRYVAP 227
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
R AKETLEI+ PLA+RLG++T K +LE+L F L P + E+ + E E
Sbjct: 228 ESSARKAKETLEIYAPLAHRLGMNTIKWELEDLSFAALYPKVYAEIVRLVGERTPEREKN 287
Query: 181 SAI--EKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
A ++E+ LK+ I V+ GR K YSI+ KM+ + DEIHD+ G+R++V++
Sbjct: 288 LAALRGQIERDLKEARIR-AVVTGRPKHFYSIYQKMIVRGKDFDEIHDLMGVRVLVDSVR 346
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W+ +PG+ KDYI PK N YQSLHT V G G P+E+Q+RT EMH +A
Sbjct: 347 DCYGALGVLHSKWSPLPGRFKDYIAMPKLNMYQSLHTTVIGPGGKPVEIQLRTHEMHRRA 406
Query: 299 EFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQ 333
E+G AAHW+YK+ S+ Q W R V+ WQ
Sbjct: 407 EYGVAAHWKYKDQASTPSAATGDQTPGWLRSVMDWQ 442
>gi|326382134|ref|ZP_08203826.1| RelA/SpoT family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326198864|gb|EGD56046.1| RelA/SpoT family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 729
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 202/344 (58%), Gaps = 17/344 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S D + FG VA LV
Sbjct: 39 FRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLDQLEADFGTEVAHLV 98
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 99 DGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 151 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEIVRLVADRAPSRDT 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ L AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 211 YLARVRSDLNTALGASRITATV-EGRPKHYWSIYQKMIVKGKDFDDIHDLVGMRILCDEV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P F YQSLHT V G PLEVQIRT EMH
Sbjct: 270 RDCYAAIGVVHSLWQPMAGRFKDYIAQPSFGVYQSLHTTVIGPEGKPLEVQIRTFEMHRT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
AEFG AAHWRYKEG + E W R +L WQ EA
Sbjct: 330 AEFGIAAHWRYKEGRKGKGRKATDVAEVDDMAWMRQLLDWQREA 373
>gi|295692846|ref|YP_003601456.1| GTP pyrophosphokinase [Lactobacillus crispatus ST1]
gi|295030952|emb|CBL50431.1| GTP pyrophosphokinase [Lactobacillus crispatus ST1]
Length = 746
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 196/318 (61%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D + FG VA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVTNDELKEKFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 104 GVTKLNKYEY------KSHQEFLAENHRKMLIAMAQDLRVIMVKLADRLHNMHTLQHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 158 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV
Sbjct: 214 REKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++M
Sbjct: 273 KNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEQM 332
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 333 HKVAEYGVAAHWAYKRGN 350
>gi|452960672|gb|EME65987.1| gtp diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-diphosphatase [Rhodococcus ruber BKS 20-38]
Length = 724
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 204/341 (59%), Gaps = 16/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 37 RKSGDPYITHPLAVATILAELGMDTTTLIAALLHDTVEDTGYSLEQLTAEFGEEVAHLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 97 GVTKLDKV--------VLGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 148
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC---FDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ +LV +
Sbjct: 149 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIV-RLVATRAPSRDT 207
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L I V GR K +SI+ KM+ K D+IHD+ G+R++
Sbjct: 208 YLAKVRAEINSTLSASRIEATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCNEI 266
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT+EMH
Sbjct: 267 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTREMHRT 326
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
AEFG AAHWRYKE +HS ++ + W R +L WQ EA
Sbjct: 327 AEFGIAAHWRYKETKGKHSGDATELDDMAWMRQLLDWQREA 367
>gi|217420352|ref|ZP_03451857.1| GTP diphosphokinase [Burkholderia pseudomallei 576]
gi|217395764|gb|EEC35781.1| GTP diphosphokinase [Burkholderia pseudomallei 576]
Length = 789
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 256/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FG VA+LV+
Sbjct: 91 RQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVD 150
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 151 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 204
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 205 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 264
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E +++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 265 IGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFSQVLDVYGFRIVVEHPL 323
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 324 DCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 383
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 384 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 443
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 444 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 499
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 500 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 549
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 550 -----GLALADVTPEV 560
>gi|73747961|ref|YP_307200.1| GTP pyrophosphokinase [Dehalococcoides sp. CBDB1]
gi|289431960|ref|YP_003461833.1| (p)ppGpp synthetase I SpoT/RelA [Dehalococcoides sp. GT]
gi|452204331|ref|YP_007484460.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi BTF08]
gi|73659677|emb|CAI82284.1| GTP pyrophosphokinase [Dehalococcoides sp. CBDB1]
gi|288945680|gb|ADC73377.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. GT]
gi|452111387|gb|AGG07118.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi BTF08]
Length = 728
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/346 (43%), Positives = 211/346 (60%), Gaps = 22/346 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+P++ H + AM LA + ++ ++A LLHD +DA +S + I + FGA VA LV
Sbjct: 37 MRKSGEPFIEHPLNVAMTLADLQLDAATLSAALLHDVPEDANISLEQIDKKFGADVAKLV 96
Query: 61 EGVSKLSQLS-----KLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 114
+GV+KLS+L+ + AR + +A+ L M +AMA D R V IKLADR HNM T
Sbjct: 97 DGVTKLSKLALGPAIEDARRPGGNASLRQAENLRKMLVAMAEDLRVVFIKLADRFHNMRT 156
Query: 115 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKL 170
L AL KR+ AKET+EI+ PLA+RLGI K QLE+L F++L+P + +++ SKL
Sbjct: 157 LQALSPEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKL 216
Query: 171 VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK---KKLTMDEIHDI 227
+ + SAI Q +KN + + GR K LYSI+ KM K + ++I+D+
Sbjct: 217 AQRQNYLEHVSAIL---QGEFEKNGLNVEVSGRPKHLYSIYQKMEKYASQGKQFEDIYDV 273
Query: 228 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEV 287
LR++V + DCY A+ +VH LW +PG DYI PK NGYQSLHT V G PLEV
Sbjct: 274 LALRVLVNDIPDCYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSLGTTPLEV 333
Query: 288 QIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF------VLQMVEWAR 327
Q+RT +MH AE+G AAHWRYK + +F + Q++EW R
Sbjct: 334 QVRTYQMHHIAEYGVAAHWRYKTAGKEDVNFEDRIGWLRQLIEWHR 379
>gi|166031162|ref|ZP_02233991.1| hypothetical protein DORFOR_00848 [Dorea formicigenerans ATCC
27755]
gi|166029009|gb|EDR47766.1| RelA/SpoT family protein [Dorea formicigenerans ATCC 27755]
Length = 803
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 235/408 (57%), Gaps = 40/408 (9%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + A LLHD ++D + DYI FG VA LV+
Sbjct: 106 RKSGEPYIIHPLWVAIILADLEMDKETIIAALLHDVVEDTRIGEDYIKEEFGEEVALLVD 165
Query: 62 GVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL +++ +A K ++A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 166 GVTKLGRVA------YSADKLELQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMT 219
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
K+Q A+ET++I+ P+A RLGIS K +L++L K+L PD +L +++ + E
Sbjct: 220 PAKQQEKARETMDIYAPIAGRLGISKIKTELDDLSLKYLKPDVFFDLVNQINARKTEREE 279
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V ++++ +K+ I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++
Sbjct: 280 FVQQIVDEVSMHMKNAGIKADV-NGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIVDSV 338
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + P E+QIRT+EMH
Sbjct: 339 KDCYAALGIIHEIYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSIGQPFEIQIRTQEMHKT 398
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCEAMSKDRSCVG--NGDSIKPP 353
AE+G AAHW+YKE + + + W R +L WQ + MS ++ + GD
Sbjct: 399 AEYGIAAHWKYKESGGSKKGVMAEEEKMSWLRQILEWQRD-MSDNKEFLSLIKGD----- 452
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
ADD + + PQ V+ PT ST +D
Sbjct: 453 --LDLFADDV-YCFTPQG----------------DVKTLPTGSTPIDF 481
>gi|147668657|ref|YP_001213475.1| (p)ppGpp synthetase I SpoT/RelA [Dehalococcoides sp. BAV1]
gi|146269605|gb|ABQ16597.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. BAV1]
Length = 728
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/346 (43%), Positives = 211/346 (60%), Gaps = 22/346 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+P++ H + AM LA + ++ ++A LLHD +DA +S + I + FGA VA LV
Sbjct: 37 MRKSGEPFIEHPLNVAMTLADLQLDAATLSAALLHDVPEDANISLEQIDKKFGADVAKLV 96
Query: 61 EGVSKLSQLS-----KLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 114
+GV+KLS+L+ + AR + +A+ L M +AMA D R V IKLADR HNM T
Sbjct: 97 DGVTKLSKLALGPAIEDARRPGGNASLRQAENLRKMLVAMAEDLRVVFIKLADRFHNMRT 156
Query: 115 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKL 170
L AL KR+ AKET+EI+ PLA+RLGI K QLE+L F++L+P + +++ SKL
Sbjct: 157 LQALSPEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKL 216
Query: 171 VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK---KKLTMDEIHDI 227
+ + SAI Q +KN + + GR K LYSI+ KM K + ++I+D+
Sbjct: 217 AQRQNYLEHVSAIL---QGEFEKNGLNVEVSGRPKHLYSIYQKMEKYASQGKQFEDIYDV 273
Query: 228 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEV 287
LR++V + DCY A+ +VH LW +PG DYI PK NGYQSLHT V G PLEV
Sbjct: 274 LALRVLVNDIPDCYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSLGTTPLEV 333
Query: 288 QIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF------VLQMVEWAR 327
Q+RT +MH AE+G AAHWRYK + +F + Q++EW R
Sbjct: 334 QVRTYQMHHIAEYGVAAHWRYKTAGKEDVNFEDRIGWLRQLIEWHR 379
>gi|167767126|ref|ZP_02439179.1| hypothetical protein CLOSS21_01644 [Clostridium sp. SS2/1]
gi|167711101|gb|EDS21680.1| RelA/SpoT family protein [Clostridium sp. SS2/1]
gi|291559545|emb|CBL38345.1| (p)ppGpp synthetase, RelA/SpoT family [butyrate-producing bacterium
SSC/2]
Length = 765
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/336 (40%), Positives = 213/336 (63%), Gaps = 10/336 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D +++ I R FG VA LV+
Sbjct: 64 RKSGEPYIIHPICVAIILAELELDKETIMAGLLHDVVEDTETTHEDIVRDFGEEVAQLVD 123
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS + V+A+ L MFLAMA D R +LIKLADRLHNM T+ +
Sbjct: 124 GVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMRP 178
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD + +L L +E A
Sbjct: 179 EKQKEKSRETMDIYAPIAHRLGISKIKVELDDLALRYLKPDVYEDLERSLDSAKEEREAF 238
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +++++ + I + GR K ++SI+ KM+ + T+D+I+D++ +R+ V+ +
Sbjct: 239 IQEIVDEVKGHIDRAGIKAEI-DGRVKHMFSIYKKMVNQHKTIDQIYDLFAVRIKVDTVK 297
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 298 DCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEGHPFEIQIRTFEMHRVA 357
Query: 299 EFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQ 333
E+G AAHW+YKE + + + + W R VL WQ
Sbjct: 358 EYGIAAHWKYKENNNTKGLNKEEEKLSWLREVLEWQ 393
>gi|256961538|ref|ZP_05565709.1| RelA/SpoT protein [Enterococcus faecalis Merz96]
gi|293384703|ref|ZP_06630558.1| GTP diphosphokinase [Enterococcus faecalis R712]
gi|293387403|ref|ZP_06631958.1| GTP diphosphokinase [Enterococcus faecalis S613]
gi|312908311|ref|ZP_07767275.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 512]
gi|312910615|ref|ZP_07769457.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 516]
gi|256952034|gb|EEU68666.1| RelA/SpoT protein [Enterococcus faecalis Merz96]
gi|291078010|gb|EFE15374.1| GTP diphosphokinase [Enterococcus faecalis R712]
gi|291083194|gb|EFE20157.1| GTP diphosphokinase [Enterococcus faecalis S613]
gi|310625725|gb|EFQ09008.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 512]
gi|311289163|gb|EFQ67719.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 516]
Length = 737
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA G LHD ++D ++ D + FG +A LV
Sbjct: 43 VRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDVTLDDLKEEFGEDIAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q+ + + + DE A
Sbjct: 157 EDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQYYRIVNLMQSKRDEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V A+E + A +D I + + GR K +YSI+ KM +K +EI+D+ +R+IV++
Sbjct: 217 YVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQS+HT V G P+EVQIRT EMH
Sbjct: 276 KDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGPKGNPVEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 336 AEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|433647464|ref|YP_007292466.1| (p)ppGpp synthetase, RelA/SpoT family [Mycobacterium smegmatis
JS623]
gi|433297241|gb|AGB23061.1| (p)ppGpp synthetase, RelA/SpoT family [Mycobacterium smegmatis
JS623]
Length = 782
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 209/353 (59%), Gaps = 35/353 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FG VA LV
Sbjct: 91 MRRSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYTMEQLTADFGEEVAHLV 150
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ +A+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 151 DGVTKLDRVA--------LGTAADAETIRKMIIAMARDGRVLVIKVADRLHNMRTMRFLP 202
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-----------SS 168
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ +
Sbjct: 203 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 262
Query: 169 KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIY 228
L + DE T K+ ++ GR K +SI+ KM+ K D+IHD+
Sbjct: 263 YLAKVRDEITSTLNASKINADVE----------GRPKHYWSIYQKMIVKGRDFDDIHDLV 312
Query: 229 GLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQ 288
G+R++ + DCY A+ VVH LW +PG+ KDYI +P++ YQSLHT V G PLEVQ
Sbjct: 313 GVRILCDEIRDCYAAVGVVHSLWQPMPGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQ 372
Query: 289 IRTKEMHLQAEFGFAAHWRYKEGDCQ-----HSSFVLQMVEWARWVLTWQCEA 336
IRT++MH AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 373 IRTRDMHTTAEYGIAAHWRYKETKGRNAPHPHAAAEIDDMAWMRQLLDWQREA 425
>gi|53720172|ref|YP_109158.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei K96243]
gi|53726018|ref|YP_103668.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei ATCC 23344]
gi|67643935|ref|ZP_00442678.1| GTP pyrophosphokinase [Burkholderia mallei GB8 horse 4]
gi|76811711|ref|YP_334422.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei 1710b]
gi|121601566|ref|YP_992160.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei SAVP1]
gi|124383450|ref|YP_001028605.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei NCTC 10229]
gi|126439987|ref|YP_001059962.1| GTP pyrophosphokinase [Burkholderia pseudomallei 668]
gi|126449677|ref|YP_001081496.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei NCTC 10247]
gi|126452109|ref|YP_001067254.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106a]
gi|134280234|ref|ZP_01766945.1| GTP pyrophosphokinase [Burkholderia pseudomallei 305]
gi|166998290|ref|ZP_02264150.1| GTP pyrophosphokinase [Burkholderia mallei PRL-20]
gi|167720739|ref|ZP_02403975.1| GTP pyrophosphokinase [Burkholderia pseudomallei DM98]
gi|167739720|ref|ZP_02412494.1| GTP pyrophosphokinase [Burkholderia pseudomallei 14]
gi|167816924|ref|ZP_02448604.1| GTP pyrophosphokinase [Burkholderia pseudomallei 91]
gi|167825327|ref|ZP_02456798.1| GTP pyrophosphokinase [Burkholderia pseudomallei 9]
gi|167846829|ref|ZP_02472337.1| GTP pyrophosphokinase [Burkholderia pseudomallei B7210]
gi|167895420|ref|ZP_02482822.1| GTP pyrophosphokinase [Burkholderia pseudomallei 7894]
gi|167903805|ref|ZP_02491010.1| GTP pyrophosphokinase [Burkholderia pseudomallei NCTC 13177]
gi|167912071|ref|ZP_02499162.1| GTP pyrophosphokinase [Burkholderia pseudomallei 112]
gi|167920045|ref|ZP_02507136.1| GTP pyrophosphokinase [Burkholderia pseudomallei BCC215]
gi|226193783|ref|ZP_03789385.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pakistan 9]
gi|237813378|ref|YP_002897829.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Burkholderia
pseudomallei MSHR346]
gi|242318111|ref|ZP_04817127.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106b]
gi|254181032|ref|ZP_04887630.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1655]
gi|254191878|ref|ZP_04898381.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pasteur 52237]
gi|254196051|ref|ZP_04902476.1| GTP pyrophosphokinase [Burkholderia pseudomallei S13]
gi|254202366|ref|ZP_04908729.1| GTP pyrophosphokinase [Burkholderia mallei FMH]
gi|254207700|ref|ZP_04914050.1| GTP pyrophosphokinase [Burkholderia mallei JHU]
gi|254298848|ref|ZP_04966298.1| GTP pyrophosphokinase [Burkholderia pseudomallei 406e]
gi|254356400|ref|ZP_04972676.1| GTP pyrophosphokinase [Burkholderia mallei 2002721280]
gi|386860855|ref|YP_006273804.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei 1026b]
gi|403519675|ref|YP_006653809.1| GTP pyrophosphokinase [Burkholderia pseudomallei BPC006]
gi|418398307|ref|ZP_12971896.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354a]
gi|418533325|ref|ZP_13099192.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1026a]
gi|418540114|ref|ZP_13105677.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258a]
gi|418546364|ref|ZP_13111584.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258b]
gi|418557416|ref|ZP_13122011.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354e]
gi|52210586|emb|CAH36569.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei K96243]
gi|52429441|gb|AAU50034.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei ATCC 23344]
gi|76581164|gb|ABA50639.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1710b]
gi|121230376|gb|ABM52894.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei SAVP1]
gi|124291470|gb|ABN00739.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei NCTC 10229]
gi|126219480|gb|ABN82986.1| GTP diphosphokinase [Burkholderia pseudomallei 668]
gi|126225751|gb|ABN89291.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106a]
gi|126242547|gb|ABO05640.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei NCTC 10247]
gi|134248241|gb|EBA48324.1| GTP pyrophosphokinase [Burkholderia pseudomallei 305]
gi|147746613|gb|EDK53690.1| GTP pyrophosphokinase [Burkholderia mallei FMH]
gi|147751594|gb|EDK58661.1| GTP pyrophosphokinase [Burkholderia mallei JHU]
gi|148025397|gb|EDK83551.1| GTP pyrophosphokinase [Burkholderia mallei 2002721280]
gi|157809170|gb|EDO86340.1| GTP pyrophosphokinase [Burkholderia pseudomallei 406e]
gi|157939549|gb|EDO95219.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pasteur 52237]
gi|169652795|gb|EDS85488.1| GTP pyrophosphokinase [Burkholderia pseudomallei S13]
gi|184211571|gb|EDU08614.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1655]
gi|225934088|gb|EEH30073.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pakistan 9]
gi|237505941|gb|ACQ98259.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Burkholderia
pseudomallei MSHR346]
gi|238525404|gb|EEP88832.1| GTP pyrophosphokinase [Burkholderia mallei GB8 horse 4]
gi|242141350|gb|EES27752.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106b]
gi|243065365|gb|EES47551.1| GTP pyrophosphokinase [Burkholderia mallei PRL-20]
gi|385361360|gb|EIF67245.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1026a]
gi|385362697|gb|EIF68504.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258a]
gi|385364782|gb|EIF70489.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258b]
gi|385365058|gb|EIF70755.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354e]
gi|385366377|gb|EIF72000.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354a]
gi|385657983|gb|AFI65406.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1026b]
gi|403075318|gb|AFR16898.1| GTP pyrophosphokinase [Burkholderia pseudomallei BPC006]
Length = 789
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 256/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FG VA+LV+
Sbjct: 91 RQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVD 150
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 151 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 204
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 205 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 264
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E +++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 265 IGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFSQVLDVYGFRIVVEHPL 323
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 324 DCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 383
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 384 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 443
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 444 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 499
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 500 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 549
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 550 -----GLALADVTPEV 560
>gi|83719914|ref|YP_442129.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis E264]
gi|167581000|ref|ZP_02373874.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis TXDOH]
gi|167619077|ref|ZP_02387708.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis Bt4]
gi|257138317|ref|ZP_05586579.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis E264]
gi|83653739|gb|ABC37802.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis E264]
Length = 789
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 256/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FG VA+LV+
Sbjct: 91 RQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVD 150
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 151 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 204
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 205 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 264
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E +++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 265 IGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFSQVLDVYGFRIVVEHPL 323
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 324 DCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 383
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 384 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 443
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 444 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 499
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 500 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 549
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 550 -----GLALADVTPEV 560
>gi|402567278|ref|YP_006616623.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cepacia GG4]
gi|402248475|gb|AFQ48929.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cepacia GG4]
Length = 788
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 255/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 264 ISKILESAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVESPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHSLYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 383 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 442
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 443 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 498
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 499 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 548
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 549 -----GLALADVAPEV 559
>gi|436839902|ref|YP_007324280.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432168808|emb|CCO22174.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 737
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 203/341 (59%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PYL H + A LLA + + VAAGLLHDT++D + D I FG VAD+V
Sbjct: 54 MRLSGEPYLAHPLHVAKLLADMRLDEPTVAAGLLHDTVEDTDTTIDEIVELFGEEVADIV 113
Query: 61 EGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+K+S + + SK + +A+ + M LAMA D R +++KLADRLHNM TLD
Sbjct: 114 DGVTKISMM-------DFESKAIAKAENIRKMILAMAEDIRVLMVKLADRLHNMRTLDFQ 166
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDE 176
K+Q A+ETL+I+ PLANRLG+ K LE+LC +L PD + ++ L +
Sbjct: 167 KSYKQQLIAQETLDIYSPLANRLGLYMVKRDLEDLCLYYLKPDVYNAITDGLERQHTLGK 226
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
V + L LK+ I + GR K +SIH KM ++ L +DE+HDI R+IV++
Sbjct: 227 EYVDKVLALLNDILKNNEIEGTIY-GRTKHKFSIHKKMQRQGLNLDEVHDIIAFRVIVDS 285
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY L +VH +W + G+ KDYI+ PK N YQSLHT V G +E+QIRT+EM
Sbjct: 286 VKDCYSVLGLVHSMWKPISGRFKDYISIPKANMYQSLHTTVIGPEGERIEIQIRTEEMQQ 345
Query: 297 QAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE + + W R ++ WQ E
Sbjct: 346 VAEYGIAAHWQYKETGTSVAKQNRDAERFSWLRQIMDWQRE 386
>gi|357588769|ref|ZP_09127435.1| GTP pyrophosphokinase [Corynebacterium nuruki S6-4]
Length = 759
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/342 (41%), Positives = 217/342 (63%), Gaps = 16/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 62 LRKSGEPYITHPLAVANIAAEIGMDTTTLVAALLHDTVEDTDYSLEDLTRDFGPEVALLV 121
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 122 DGVTKLDKVA--------LGSAAEAETIRKMIVAMAHDPRVLVIKVADRLHNMRTMRFLP 173
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+ + A++TLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 174 PEKQAKKARQTLEVIAPLAHRLGMATIKWELEDLSFAILYPKKYDEIVRLVADRAPKRDQ 233
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+T I++++Q + +I+ V+ GR K +SI+ KM+ + D+I+D+ G+R++V++
Sbjct: 234 YLTKVIDEIQQTMTSAHITAEVV-GRPKHYWSIYQKMIVRGRDFDDIYDLVGIRILVDDV 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY A+ VH L+ +PG+ KDYI++P+F Y+SLHT V G LEVQIRT EMH +
Sbjct: 293 KDCYAAIGAVHSLYQPMPGRFKDYISQPRFGVYRSLHTTVIGPDAKALEVQIRTHEMHYE 352
Query: 298 AEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE H ++ V QM W R +L WQ EA
Sbjct: 353 AEYGIAAHWRYKETKGSHKGDNAEVDQMA-WMRQLLDWQKEA 393
>gi|441508395|ref|ZP_20990319.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia aichiensis NBRC 108223]
gi|441447423|dbj|GAC48280.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia aichiensis NBRC 108223]
Length = 830
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 207/345 (60%), Gaps = 20/345 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FGA VA LV+
Sbjct: 139 RKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLEALESEFGAEVAHLVD 198
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 199 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 250
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 251 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 310
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ ++
Sbjct: 311 LARVRADINNALSSAKITATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGMRILCDDVR 369
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT +MH A
Sbjct: 370 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTNDMHRTA 429
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHWRYKE G ++ + M W R +L WQ EA
Sbjct: 430 EFGIAAHWRYKENGYRDRKGRKSDAAEIDDMA-WMRQLLDWQREA 473
>gi|254175404|ref|ZP_04882064.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei ATCC 10399]
gi|160696448|gb|EDP86418.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei ATCC 10399]
Length = 789
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 255/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FG VA+LV+
Sbjct: 91 RQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVD 150
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 151 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 204
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + +
Sbjct: 205 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAAIAARGNRREV 264
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E +++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 265 IGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFSQVLDVYGFRIVVEHPL 323
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 324 DCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 383
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 384 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 443
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 444 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 499
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 500 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 549
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 550 -----GLALADVTPEV 560
>gi|352518328|ref|YP_004887645.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
gi|348602435|dbj|BAK95481.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
Length = 737
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 207/341 (60%), Gaps = 12/341 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + +A G LHD ++D ++ D + FG VA +V+
Sbjct: 44 RKSGEPYIIHPIQVAGILAELHMDPHTIAVGFLHDVVEDTDVTLDDLKNEFGHDVAMIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 104 GVTKLGKIKYKSHEEQLA------ENYRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLRD 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++R A+ETLEI+ PLA+RLGIS K +LE+L ++LNP Q+ + + DE
Sbjct: 158 DKQRRIARETLEIYAPLADRLGISRIKWELEDLSLRYLNPKQYYRIVHLMQSKRDEREKY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V A+E++ A +D +I + + GR K +YS++ KM+ KK DEI+D+ +R+IV++ +
Sbjct: 218 VKQAVEEIRIATEDLDI-YAEIYGRPKHIYSVYRKMVDKKKQFDEIYDLLAIRVIVDSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +H W +PG+ KDYI PK N YQS+HT V G P+E+QIRT +MH A
Sbjct: 277 DCYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSIHTTVIGPNGNPVEIQIRTHQMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEAM 337
EFG AAHW YKEG + + V W + +L Q E+
Sbjct: 337 EFGVAAHWAYKEGHTEEIQPDEMTNQVGWFKELLELQDESF 377
>gi|29376496|ref|NP_815650.1| GTP pyrophosphokinase [Enterococcus faecalis V583]
gi|227519316|ref|ZP_03949365.1| GTP pyrophosphokinase [Enterococcus faecalis TX0104]
gi|229545443|ref|ZP_04434168.1| GTP pyrophosphokinase [Enterococcus faecalis TX1322]
gi|229549687|ref|ZP_04438412.1| GTP pyrophosphokinase [Enterococcus faecalis ATCC 29200]
gi|255972385|ref|ZP_05422971.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255975488|ref|ZP_05426074.1| RelA/SpoT protein [Enterococcus faecalis T2]
gi|256762903|ref|ZP_05503483.1| RelA/SpoT protein [Enterococcus faecalis T3]
gi|256853488|ref|ZP_05558858.1| GTP pyrophosphokinase [Enterococcus faecalis T8]
gi|256959287|ref|ZP_05563458.1| RelA/SpoT protein [Enterococcus faecalis DS5]
gi|256964754|ref|ZP_05568925.1| RelA/SpoT protein [Enterococcus faecalis HIP11704]
gi|257079353|ref|ZP_05573714.1| RelA/SpoT protein [Enterococcus faecalis JH1]
gi|257082207|ref|ZP_05576568.1| RelA/SpoT protein [Enterococcus faecalis E1Sol]
gi|257084825|ref|ZP_05579186.1| RelA/SpoT protein [Enterococcus faecalis Fly1]
gi|257087178|ref|ZP_05581539.1| RelA/SpoT protein [Enterococcus faecalis D6]
gi|257419654|ref|ZP_05596648.1| RelA/SpoT family protein [Enterococcus faecalis T11]
gi|294779745|ref|ZP_06745132.1| GTP diphosphokinase [Enterococcus faecalis PC1.1]
gi|300860169|ref|ZP_07106256.1| GTP diphosphokinase [Enterococcus faecalis TUSoD Ef11]
gi|307268139|ref|ZP_07549526.1| GTP diphosphokinase [Enterococcus faecalis TX4248]
gi|307272834|ref|ZP_07554081.1| GTP diphosphokinase [Enterococcus faecalis TX0855]
gi|307275913|ref|ZP_07557046.1| GTP diphosphokinase [Enterococcus faecalis TX2134]
gi|307277696|ref|ZP_07558782.1| GTP diphosphokinase [Enterococcus faecalis TX0860]
gi|307287881|ref|ZP_07567914.1| GTP diphosphokinase [Enterococcus faecalis TX0109]
gi|307295910|ref|ZP_07575742.1| GTP diphosphokinase [Enterococcus faecalis TX0411]
gi|312900879|ref|ZP_07760173.1| GTP diphosphokinase [Enterococcus faecalis TX0470]
gi|312951286|ref|ZP_07770187.1| GTP diphosphokinase [Enterococcus faecalis TX0102]
gi|384513600|ref|YP_005708693.1| GTP diphosphokinase [Enterococcus faecalis OG1RF]
gi|384518976|ref|YP_005706281.1| GTP pyrophosphokinase [Enterococcus faecalis 62]
gi|397700204|ref|YP_006537992.1| GTP pyrophosphokinase [Enterococcus faecalis D32]
gi|422686386|ref|ZP_16744584.1| GTP diphosphokinase [Enterococcus faecalis TX4000]
gi|422692692|ref|ZP_16750707.1| GTP diphosphokinase [Enterococcus faecalis TX0031]
gi|422697189|ref|ZP_16755135.1| GTP diphosphokinase [Enterococcus faecalis TX1346]
gi|422704878|ref|ZP_16762688.1| GTP diphosphokinase [Enterococcus faecalis TX1302]
gi|422711426|ref|ZP_16768355.1| GTP diphosphokinase [Enterococcus faecalis TX0027]
gi|422713284|ref|ZP_16770037.1| GTP diphosphokinase [Enterococcus faecalis TX0309A]
gi|422717180|ref|ZP_16773870.1| GTP diphosphokinase [Enterococcus faecalis TX0309B]
gi|422719465|ref|ZP_16776106.1| GTP diphosphokinase [Enterococcus faecalis TX0017]
gi|422724016|ref|ZP_16780506.1| GTP diphosphokinase [Enterococcus faecalis TX2137]
gi|422725202|ref|ZP_16781670.1| GTP diphosphokinase [Enterococcus faecalis TX0312]
gi|422730242|ref|ZP_16786635.1| GTP diphosphokinase [Enterococcus faecalis TX0012]
gi|422732553|ref|ZP_16788884.1| GTP diphosphokinase [Enterococcus faecalis TX0645]
gi|422735767|ref|ZP_16792033.1| GTP diphosphokinase [Enterococcus faecalis TX1341]
gi|422741846|ref|ZP_16795868.1| GTP diphosphokinase [Enterococcus faecalis TX2141]
gi|424672845|ref|ZP_18109788.1| GTP diphosphokinase [Enterococcus faecalis 599]
gi|424678338|ref|ZP_18115178.1| GTP diphosphokinase [Enterococcus faecalis ERV103]
gi|424682195|ref|ZP_18118972.1| GTP diphosphokinase [Enterococcus faecalis ERV116]
gi|424685423|ref|ZP_18122121.1| GTP diphosphokinase [Enterococcus faecalis ERV129]
gi|424688183|ref|ZP_18124799.1| GTP diphosphokinase [Enterococcus faecalis ERV25]
gi|424691052|ref|ZP_18127579.1| GTP diphosphokinase [Enterococcus faecalis ERV31]
gi|424694635|ref|ZP_18131031.1| GTP diphosphokinase [Enterococcus faecalis ERV37]
gi|424695820|ref|ZP_18132193.1| GTP diphosphokinase [Enterococcus faecalis ERV41]
gi|424702067|ref|ZP_18138230.1| GTP diphosphokinase [Enterococcus faecalis ERV62]
gi|424704288|ref|ZP_18140390.1| GTP diphosphokinase [Enterococcus faecalis ERV63]
gi|424712754|ref|ZP_18144923.1| GTP diphosphokinase [Enterococcus faecalis ERV65]
gi|424716877|ref|ZP_18146176.1| GTP diphosphokinase [Enterococcus faecalis ERV68]
gi|424722259|ref|ZP_18151323.1| GTP diphosphokinase [Enterococcus faecalis ERV72]
gi|424722967|ref|ZP_18151987.1| GTP diphosphokinase [Enterococcus faecalis ERV73]
gi|424728350|ref|ZP_18156957.1| GTP diphosphokinase [Enterococcus faecalis ERV81]
gi|424740517|ref|ZP_18168899.1| GTP diphosphokinase [Enterococcus faecalis ERV85]
gi|424749874|ref|ZP_18177951.1| GTP diphosphokinase [Enterococcus faecalis ERV93]
gi|424759337|ref|ZP_18187003.1| GTP diphosphokinase [Enterococcus faecalis R508]
gi|428767377|ref|YP_007153488.1| GTP pyrophosphokinase [Enterococcus faecalis str. Symbioflor 1]
gi|430360791|ref|ZP_19426449.1| RelA/SpoT family protein [Enterococcus faecalis OG1X]
gi|430367252|ref|ZP_19427815.1| RelA/SpoT family protein [Enterococcus faecalis M7]
gi|29343960|gb|AAO81720.1| GTP pyrophosphokinase [Enterococcus faecalis V583]
gi|227073245|gb|EEI11208.1| GTP pyrophosphokinase [Enterococcus faecalis TX0104]
gi|229305167|gb|EEN71163.1| GTP pyrophosphokinase [Enterococcus faecalis ATCC 29200]
gi|229309359|gb|EEN75346.1| GTP pyrophosphokinase [Enterococcus faecalis TX1322]
gi|255963403|gb|EET95879.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255968360|gb|EET98982.1| RelA/SpoT protein [Enterococcus faecalis T2]
gi|256684154|gb|EEU23849.1| RelA/SpoT protein [Enterococcus faecalis T3]
gi|256711947|gb|EEU26985.1| GTP pyrophosphokinase [Enterococcus faecalis T8]
gi|256949783|gb|EEU66415.1| RelA/SpoT protein [Enterococcus faecalis DS5]
gi|256955250|gb|EEU71882.1| RelA/SpoT protein [Enterococcus faecalis HIP11704]
gi|256987383|gb|EEU74685.1| RelA/SpoT protein [Enterococcus faecalis JH1]
gi|256990237|gb|EEU77539.1| RelA/SpoT protein [Enterococcus faecalis E1Sol]
gi|256992855|gb|EEU80157.1| RelA/SpoT protein [Enterococcus faecalis Fly1]
gi|256995208|gb|EEU82510.1| RelA/SpoT protein [Enterococcus faecalis D6]
gi|257161482|gb|EEU91442.1| RelA/SpoT family protein [Enterococcus faecalis T11]
gi|294453119|gb|EFG21534.1| GTP diphosphokinase [Enterococcus faecalis PC1.1]
gi|295113238|emb|CBL31875.1| (p)ppGpp synthetase, RelA/SpoT family [Enterococcus sp. 7L76]
gi|300849208|gb|EFK76958.1| GTP diphosphokinase [Enterococcus faecalis TUSoD Ef11]
gi|306496241|gb|EFM65820.1| GTP diphosphokinase [Enterococcus faecalis TX0411]
gi|306501026|gb|EFM70333.1| GTP diphosphokinase [Enterococcus faecalis TX0109]
gi|306505575|gb|EFM74759.1| GTP diphosphokinase [Enterococcus faecalis TX0860]
gi|306507243|gb|EFM76380.1| GTP diphosphokinase [Enterococcus faecalis TX2134]
gi|306510448|gb|EFM79471.1| GTP diphosphokinase [Enterococcus faecalis TX0855]
gi|306515529|gb|EFM84057.1| GTP diphosphokinase [Enterococcus faecalis TX4248]
gi|310630722|gb|EFQ14005.1| GTP diphosphokinase [Enterococcus faecalis TX0102]
gi|311291978|gb|EFQ70534.1| GTP diphosphokinase [Enterococcus faecalis TX0470]
gi|315025979|gb|EFT37911.1| GTP diphosphokinase [Enterococcus faecalis TX2137]
gi|315028900|gb|EFT40832.1| GTP diphosphokinase [Enterococcus faecalis TX4000]
gi|315033291|gb|EFT45223.1| GTP diphosphokinase [Enterococcus faecalis TX0017]
gi|315034529|gb|EFT46461.1| GTP diphosphokinase [Enterococcus faecalis TX0027]
gi|315143404|gb|EFT87420.1| GTP diphosphokinase [Enterococcus faecalis TX2141]
gi|315149223|gb|EFT93239.1| GTP diphosphokinase [Enterococcus faecalis TX0012]
gi|315152592|gb|EFT96608.1| GTP diphosphokinase [Enterococcus faecalis TX0031]
gi|315159888|gb|EFU03905.1| GTP diphosphokinase [Enterococcus faecalis TX0312]
gi|315161370|gb|EFU05387.1| GTP diphosphokinase [Enterococcus faecalis TX0645]
gi|315163667|gb|EFU07684.1| GTP diphosphokinase [Enterococcus faecalis TX1302]
gi|315167501|gb|EFU11518.1| GTP diphosphokinase [Enterococcus faecalis TX1341]
gi|315174315|gb|EFU18332.1| GTP diphosphokinase [Enterococcus faecalis TX1346]
gi|315574555|gb|EFU86746.1| GTP diphosphokinase [Enterococcus faecalis TX0309B]
gi|315581803|gb|EFU93994.1| GTP diphosphokinase [Enterococcus faecalis TX0309A]
gi|323481109|gb|ADX80548.1| GTP pyrophosphokinase [Enterococcus faecalis 62]
gi|327535489|gb|AEA94323.1| GTP diphosphokinase [Enterococcus faecalis OG1RF]
gi|397336843|gb|AFO44515.1| GTP pyrophosphokinase [Enterococcus faecalis D32]
gi|402349566|gb|EJU84510.1| GTP diphosphokinase [Enterococcus faecalis ERV116]
gi|402351666|gb|EJU86546.1| GTP diphosphokinase [Enterococcus faecalis ERV103]
gi|402353351|gb|EJU88183.1| GTP diphosphokinase [Enterococcus faecalis 599]
gi|402358773|gb|EJU93433.1| GTP diphosphokinase [Enterococcus faecalis ERV129]
gi|402361575|gb|EJU96125.1| GTP diphosphokinase [Enterococcus faecalis ERV25]
gi|402362896|gb|EJU97408.1| GTP diphosphokinase [Enterococcus faecalis ERV31]
gi|402370073|gb|EJV04313.1| GTP diphosphokinase [Enterococcus faecalis ERV62]
gi|402370270|gb|EJV04490.1| GTP diphosphokinase [Enterococcus faecalis ERV37]
gi|402379160|gb|EJV12977.1| GTP diphosphokinase [Enterococcus faecalis ERV41]
gi|402379631|gb|EJV13423.1| GTP diphosphokinase [Enterococcus faecalis ERV65]
gi|402382377|gb|EJV16044.1| GTP diphosphokinase [Enterococcus faecalis ERV63]
gi|402386637|gb|EJV20139.1| GTP diphosphokinase [Enterococcus faecalis ERV68]
gi|402389444|gb|EJV22840.1| GTP diphosphokinase [Enterococcus faecalis ERV72]
gi|402394029|gb|EJV27227.1| GTP diphosphokinase [Enterococcus faecalis ERV81]
gi|402400374|gb|EJV33205.1| GTP diphosphokinase [Enterococcus faecalis ERV73]
gi|402401938|gb|EJV34677.1| GTP diphosphokinase [Enterococcus faecalis ERV85]
gi|402404795|gb|EJV37408.1| GTP diphosphokinase [Enterococcus faecalis R508]
gi|402407443|gb|EJV39973.1| GTP diphosphokinase [Enterococcus faecalis ERV93]
gi|427185550|emb|CCO72774.1| GTP pyrophosphokinase [Enterococcus faecalis str. Symbioflor 1]
gi|429512728|gb|ELA02326.1| RelA/SpoT family protein [Enterococcus faecalis OG1X]
gi|429516725|gb|ELA06204.1| RelA/SpoT family protein [Enterococcus faecalis M7]
Length = 737
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA G LHD ++D ++ D + FG +A LV
Sbjct: 43 VRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDVTLDDLKEEFGEDIAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q+ + + + DE A
Sbjct: 157 EDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQYYRIVNLMQSKRDEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V A+E + A +D I + + GR K +YSI+ KM +K +EI+D+ +R+IV++
Sbjct: 217 YVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQS+HT V G P+EVQIRT EMH
Sbjct: 276 KDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGPKGNPVEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 336 AEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|257416410|ref|ZP_05593404.1| RelA/SpoT protein [Enterococcus faecalis ARO1/DG]
gi|422695354|ref|ZP_16753342.1| GTP diphosphokinase [Enterococcus faecalis TX4244]
gi|257158238|gb|EEU88198.1| RelA/SpoT protein [Enterococcus faecalis ARO1/DG]
gi|315147637|gb|EFT91653.1| GTP diphosphokinase [Enterococcus faecalis TX4244]
Length = 737
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA G LHD ++D ++ D + FG +A LV
Sbjct: 43 VRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDVTLDDLKEEFGEDIAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q+ + + + DE A
Sbjct: 157 EDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQYYRIVNLMQSKRDEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V A+E + A +D I + + GR K +YSI+ KM +K +EI+D+ +R+IV++
Sbjct: 217 YVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQS+HT V G P+EVQIRT EMH
Sbjct: 276 KDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGPKGNPVEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 336 AEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|406998160|gb|EKE16104.1| hypothetical protein ACD_11C00030G0012 [uncultured bacterium]
Length = 492
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 213/357 (59%), Gaps = 20/357 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+ Y+ H + TA LA +G +AAGLLHD +D +S I + FG VA +V+
Sbjct: 41 RSSGEDYIQHSLATAKTLAEMGMGRNTIAAGLLHDVYEDTSVSLKDIEKKFGKEVAFMVD 100
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL ++ KL + + + L MFLAMA D R V+IKLADRLHNM TL P
Sbjct: 101 GVSKLGKI-KL----RGSHEEYYLENLRKMFLAMAADIRVVIIKLADRLHNMQTLKHRPP 155
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA--M 178
K+ R AKET+EIF P+ANRLGI + QL++L F++L P+ + + + + E
Sbjct: 156 EKQLRIAKETMEIFAPIANRLGIGEIRSQLQDLSFEYLEPENYKFTKETITKNYQERERY 215
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V AI +LE+ LK + I + + GR KSLYS K+ K + ++++HD+ +R+IV
Sbjct: 216 VNQAIHELEKELKKEGIDVVDIHGRAKSLYSSFLKLKKYDMDINKVHDLTAVRIIVSEIA 275
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQ 297
DCY+AL +VH+ + + G++KDYI+ PK NGYQS+HT + G EG + LEVQIRT +MH +
Sbjct: 276 DCYEALGIVHKKYRPMIGRIKDYISLPKPNGYQSIHTTIFGPEGRI-LEVQIRTLKMHNE 334
Query: 298 AEFGFAAHWRYKEGDCQHS----------SFVLQMVEWARWVLTWQCEAMSKDRSCV 344
AEFG AAHW Y E + S L+ ++W + WQ E D V
Sbjct: 335 AEFGIAAHWIYSEKAKKASWKDYIFRIKKGVALKDLQWVNQLRDWQGEIGRDDEEFV 391
>gi|319651680|ref|ZP_08005807.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
gi|317396747|gb|EFV77458.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
Length = 744
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 209/340 (61%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + + VAAG LHD ++D +S + I +F + VA LV+
Sbjct: 57 RKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHDVVEDTEISLENIEESFNSEVAMLVD 116
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 117 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPA 170
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 171 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREEY 230
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + L + +I + GR K +YSI+ KM + +EI+D+ +R++V + +
Sbjct: 231 LDDVINVMRGRLSEVSIKSEI-SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIVVSSIK 289
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH A
Sbjct: 290 DCYAVLGIIHTCWKPMPGRFKDYIAMPKQNMYQSLHTTVIGPKGDPLEVQIRTMDMHRIA 349
Query: 299 EFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW YKEG + SSF ++ W R +L +Q +A
Sbjct: 350 EFGIAAHWAYKEGKRVNEGSSFEEKLT-WFREILEFQDDA 388
>gi|426403554|ref|YP_007022525.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425860222|gb|AFY01258.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 738
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/343 (40%), Positives = 203/343 (59%), Gaps = 10/343 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A +LA + +A GLLHDT++D + + I FG +A LV
Sbjct: 52 IRRSGEPYISHPLSVAAILADFHLDLDTIATGLLHDTVEDTAATLEDIRTEFGDVIAHLV 111
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+K+ Q+ + N+ K + + + M +AM D R VL+KLADRLHNM TL+ +P
Sbjct: 112 DGVTKIGQM----KFKNSHEK--QGENIRKMIVAMGKDVRVVLVKLADRLHNMRTLNFMP 165
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
K++R A ETLEI+ PLA R+GIS K++LE+LCF++ PD + EL ++ E
Sbjct: 166 FEKQERIALETLEIYCPLAGRMGISALKIELEDLCFRYYRPDMYYELVQQIKKTESEQNR 225
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + L + V GR K L+SI+ KM + + D+++D+ R++VE+
Sbjct: 226 YIDEVKVLIGKELNKAGFRYEVY-GRSKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESV 284
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY AL +VH LW +PG+ KD+I PK N YQSLHT V G G +E+QIRT EMHL
Sbjct: 285 AECYAALGLVHSLWKPIPGRFKDFIAMPKANNYQSLHTTVMGPGGERIEIQIRTSEMHLV 344
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
AE G AAHW+YKE LQ W R +++W + D
Sbjct: 345 AEKGIAAHWKYKERGKMVDDSDLQQANWLRDLVSWHQNVRNPD 387
>gi|257422238|ref|ZP_05599228.1| GTP pyrophosphokinase [Enterococcus faecalis X98]
gi|422705431|ref|ZP_16763233.1| GTP diphosphokinase [Enterococcus faecalis TX0043]
gi|257164062|gb|EEU94022.1| GTP pyrophosphokinase [Enterococcus faecalis X98]
gi|315157277|gb|EFU01294.1| GTP diphosphokinase [Enterococcus faecalis TX0043]
Length = 737
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA G LHD ++D ++ D + FG +A LV
Sbjct: 43 VRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDVTLDDLKEEFGEDIAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q+ + + + DE A
Sbjct: 157 EDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQYYRIVNLMQSKRDEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V A+E + A +D I + + GR K +YSI+ KM +K +EI+D+ +R+IV++
Sbjct: 217 YVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQS+HT V G P+EVQIRT EMH
Sbjct: 276 KDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGPKGNPVEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 336 AEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|148658211|ref|YP_001278416.1| (p)ppGpp synthetase I SpoT/RelA [Roseiflexus sp. RS-1]
gi|148570321|gb|ABQ92466.1| (p)ppGpp synthetase I, SpoT/RelA [Roseiflexus sp. RS-1]
Length = 774
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 205/335 (61%), Gaps = 10/335 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +L + ++ VAA LLHD L+D +S + + FGA +A+LV+
Sbjct: 90 RDSGEPYIDHPVAVAHILIDLQLDAASVAAALLHDVLEDTLVSKEQLTALFGAEIANLVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPL 120
V+KLS L RE + MF+AMAD R VL+KLADRLHNM T+ +L
Sbjct: 150 SVTKLSALEARTREE------AQVGTYRKMFIAMADDPRVVLVKLADRLHNMRTIGSLSE 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
+++R A ETLEI+ PLA+RLGI K +LE+ F LNP+++ E+S +L D E +
Sbjct: 204 ERQKRMALETLEIYAPLAHRLGIWQIKWELEDRAFAVLNPEKYQEISRQLSLRRDARERL 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I++L Q L+ + I + GR K +YSI+ KM +K +++D+I+D +R+IV+
Sbjct: 264 VHRVIQRLRQVLEKEGIKADI-TGRPKHIYSIYRKMERKGVSLDQIYDQLAVRVIVDTVA 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY+ L +VH W VPG+ DYI PK + YQSLHT V G P E+QIRT EMH A
Sbjct: 323 DCYRVLGLVHATWPPVPGEFDDYIAMPKESMYQSLHTTVLIPGGQPCEIQIRTHEMHEVA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E G AAHWRYKEG + + + W R ++ W+
Sbjct: 383 ERGIAAHWRYKEGFGRIDASFESKLAWLRGLIEWR 417
>gi|403515171|ref|YP_006655991.1| PpGpp synthetase [Lactobacillus helveticus R0052]
gi|403080609|gb|AFR22187.1| PpGpp synthetase [Lactobacillus helveticus R0052]
Length = 746
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 196/318 (61%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + +AAG LHDT++D ++ D + FG VA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTLATLGLDPDTIAAGFLHDTVEDTPVTNDELKEKFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 104 GVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 158 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV
Sbjct: 214 REKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++M
Sbjct: 273 KNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEQM 332
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 333 HEVAEYGVAAHWAYKRGN 350
>gi|417931889|ref|ZP_12575254.1| GTP diphosphokinase [Propionibacterium acnes SK182B-JCVI]
gi|340775832|gb|EGR97885.1| GTP diphosphokinase [Propionibacterium acnes SK182B-JCVI]
Length = 773
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 203/339 (59%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG VA LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEVALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVISIVRQDLDEAGIKATVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|325282797|ref|YP_004255338.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
gi|324314606|gb|ADY25721.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
Length = 764
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 212/345 (61%), Gaps = 34/345 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYDYIFRTFGAGVADL 59
+R SG+ Y+ H V A +LA +G ++T +AAGLLHDT++D ++++ I FG V+ +
Sbjct: 41 VRKSGEEYITHPVAVATILAELGMDTTSIAAGLLHDTVEDVDGVTFEVITAQFGPEVSRI 100
Query: 60 VEGVSKLSQLSKLARENNTAS---KTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTL 115
VEG +K+S+LSK + S + ++A+ L M +AM D R +++KLADRLHNM T+
Sbjct: 101 VEGETKVSKLSKAGSQTAEVSDDGRDMQAENLRQMLIAMTDDLRIIVVKLADRLHNMRTM 160
Query: 116 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD 175
DA+P K++R ++ET+E+F PLA+RLGI K +LE+L F++L P+++ EL S+L D
Sbjct: 161 DAMPPEKQKRISRETMEVFAPLAHRLGIGQVKWELEDLSFRYLYPEEYAELRSRLRMQLD 220
Query: 176 E--AMVTSAIEKLEQALKDKN-----ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIY 228
E +V A E L AL+D ++ + + GR K L+SI KM ++ +++I D+
Sbjct: 221 ERDGIVKQAEESLRSALEDDLELPDWVAAIDISGRSKHLWSIFGKMRREGKALEQIFDLM 280
Query: 229 GLRLI-----VENEED-----------------CYQALRVVHQLWAEVPGKMKDYITRPK 266
LR+I VE E CY + +VH LW +PG+ KDYI PK
Sbjct: 281 ALRVILTPRRVEAREGTDPERLARAEEMREKRICYHTISIVHSLWTPLPGRFKDYIAVPK 340
Query: 267 FNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 311
NGYQSLHT V G+ P+E+QIR+ MH AE+G AAHW YK+G
Sbjct: 341 PNGYQSLHTTVIGKSGQPIEIQIRSSRMHEVAEYGVAAHWMYKQG 385
>gi|317498122|ref|ZP_07956424.1| RelA/SpoT family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894599|gb|EFV16779.1| RelA/SpoT family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 765
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/336 (40%), Positives = 213/336 (63%), Gaps = 10/336 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AGLLHD ++D +++ I R FG VA LV+
Sbjct: 64 RKSGEPYIIHPICVAIILAELELDKETIMAGLLHDVVEDTETTHEDIVRDFGEEVAQLVD 123
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL QLS + V+A+ L MFLAMA D R +LIKLADRLHNM T+ +
Sbjct: 124 GVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQFMRP 178
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD + +L L +E A
Sbjct: 179 EKQKEKSRETMDIYAPIAHRLGISKIKVELDDLALRYLKPDVYEDLEHSLDSAKEEREAF 238
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +++++ + I + GR K ++SI+ KM+ + T+D+I+D++ +R+ V+ +
Sbjct: 239 IQEIVDEVKGHIDHAGIKAEI-DGRVKHMFSIYKKMVNQHKTIDQIYDLFAVRIKVDTVK 297
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH A
Sbjct: 298 DCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEGHPFEIQIRTFEMHRVA 357
Query: 299 EFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQ 333
E+G AAHW+YKE + + + + W R VL WQ
Sbjct: 358 EYGIAAHWKYKENNNTKGLNKEEEKLSWLREVLEWQ 393
>gi|415885635|ref|ZP_11547563.1| GTP diphosphokinase [Bacillus methanolicus MGA3]
gi|387591304|gb|EIJ83623.1| GTP diphosphokinase [Bacillus methanolicus MGA3]
Length = 731
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 208/340 (61%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + VAAG LHD ++D ++ + + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILADLEMDPITVAAGFLHDVIEDTDVTLEEMREAFNDEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LPL
Sbjct: 104 GVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPL 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IE++ L + +I + GR K +YSI+ KM + +EI+D+ +R++V + +
Sbjct: 218 LDDVIEEVRNRLNEVSIKAEI-SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIVVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHRIA 336
Query: 299 EFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW YKEG ++SSF ++ W R +L +Q +
Sbjct: 337 EYGIAAHWAYKEGKSVNENSSFEEKLT-WFREILEFQNDT 375
>gi|346307058|ref|ZP_08849203.1| hypothetical protein HMPREF9457_00912 [Dorea formicigenerans
4_6_53AFAA]
gi|345907004|gb|EGX76722.1| hypothetical protein HMPREF9457_00912 [Dorea formicigenerans
4_6_53AFAA]
Length = 781
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 235/408 (57%), Gaps = 40/408 (9%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + A LLHD ++D + DYI FG VA LV+
Sbjct: 84 RKSGEPYIIHPLWVAIILADLEMDKETIIAALLHDVVEDTQIGEDYIKEEFGEEVALLVD 143
Query: 62 GVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL +++ +A K ++A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 144 GVTKLGRVA------YSADKLELQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMT 197
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
K+Q A+ET++I+ P+A RLGIS K +L++L K+L PD +L +++ + E
Sbjct: 198 PAKQQEKARETMDIYAPIAGRLGISKIKTELDDLSLKYLKPDVFFDLVNQINARKTEREE 257
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V ++++ +K+ I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++
Sbjct: 258 FVQQIVDEVSMHMKNAGIKADV-NGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIVDSV 316
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + P E+QIRT+EMH
Sbjct: 317 KDCYAALGIIHEIYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSIGQPFEIQIRTQEMHKT 376
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCEAMSKDRSCVG--NGDSIKPP 353
AE+G AAHW+YKE + + + W R +L WQ + MS ++ + GD
Sbjct: 377 AEYGIAAHWKYKESGGSKKGVMAEEEKMSWLRQILEWQRD-MSDNKEFLSLIKGD----- 430
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
ADD + + PQ V+ PT ST +D
Sbjct: 431 --LDLFADDV-YCFTPQG----------------DVKTLPTGSTPIDF 459
>gi|282853881|ref|ZP_06263218.1| GTP diphosphokinase [Propionibacterium acnes J139]
gi|386071338|ref|YP_005986234.1| GTP pyrophosphokinase [Propionibacterium acnes ATCC 11828]
gi|422390533|ref|ZP_16470628.1| GTP diphosphokinase [Propionibacterium acnes HL103PA1]
gi|422459390|ref|ZP_16536038.1| GTP diphosphokinase [Propionibacterium acnes HL050PA2]
gi|422465021|ref|ZP_16541628.1| GTP diphosphokinase [Propionibacterium acnes HL060PA1]
gi|422465932|ref|ZP_16542508.1| GTP diphosphokinase [Propionibacterium acnes HL110PA4]
gi|422469845|ref|ZP_16546366.1| GTP diphosphokinase [Propionibacterium acnes HL110PA3]
gi|422564622|ref|ZP_16640273.1| GTP diphosphokinase [Propionibacterium acnes HL082PA2]
gi|422575800|ref|ZP_16651338.1| GTP diphosphokinase [Propionibacterium acnes HL001PA1]
gi|282583334|gb|EFB88714.1| GTP diphosphokinase [Propionibacterium acnes J139]
gi|314923577|gb|EFS87408.1| GTP diphosphokinase [Propionibacterium acnes HL001PA1]
gi|314966622|gb|EFT10721.1| GTP diphosphokinase [Propionibacterium acnes HL082PA2]
gi|314981351|gb|EFT25445.1| GTP diphosphokinase [Propionibacterium acnes HL110PA3]
gi|315092017|gb|EFT63993.1| GTP diphosphokinase [Propionibacterium acnes HL110PA4]
gi|315092856|gb|EFT64832.1| GTP diphosphokinase [Propionibacterium acnes HL060PA1]
gi|315103624|gb|EFT75600.1| GTP diphosphokinase [Propionibacterium acnes HL050PA2]
gi|327327446|gb|EGE69222.1| GTP diphosphokinase [Propionibacterium acnes HL103PA1]
gi|353455704|gb|AER06223.1| GTP pyrophosphokinase [Propionibacterium acnes ATCC 11828]
Length = 774
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 203/339 (59%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVISIVRQDLDEAGIKATVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|392426696|ref|YP_006467690.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus
acidiphilus SJ4]
gi|391356659|gb|AFM42358.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus
acidiphilus SJ4]
Length = 739
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/350 (41%), Positives = 206/350 (58%), Gaps = 21/350 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y+LH +E A +LA + + +AA LLHD ++D + I R FG +A LV
Sbjct: 37 LRNSGEDYILHPLEVAQILADLEMDEATIAAALLHDVVEDTEYTIADIEREFGPEIALLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ ++ + + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 97 DGVTKLGRIAYKSKVEQ------QVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHS 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
+ K++ A+ETLEIF PLANRLGI K +LE+L F++L P ++ +L L EA
Sbjct: 151 VEKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLKPQEYYDLVEGIALKRREREA 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++ + L + I + + GR K YSI+ KM + + EI+D+ +R+IVE
Sbjct: 211 YINEVIVQMRKRLNEVEI-YADIAGRPKHFYSIYRKMTTQHKELSEIYDLMAIRVIVETV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL ++H LW +PG+ KDYI PK N YQSLHT + GE P E+QIRT EMH
Sbjct: 270 NDCYGALGIIHTLWKPIPGRFKDYIAMPKPNMYQSLHTTLIGEHGEPFEIQIRTCEMHRT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL-----------QMVEWARWVLTWQCEA 336
+E+G AAHW+YKE + + Q + W R +L WQ E+
Sbjct: 330 SEYGIAAHWKYKEASSKEPAGGGGGRSAASVNFEQKLSWLRQLLEWQHES 379
>gi|377563150|ref|ZP_09792501.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia sputi NBRC 100414]
gi|377529398|dbj|GAB37666.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia sputi NBRC 100414]
Length = 802
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 207/344 (60%), Gaps = 18/344 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FGA VA LV+
Sbjct: 111 RKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYTLEALESEFGAEVAHLVD 170
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 171 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 222
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 223 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 282
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ ++
Sbjct: 283 LARVRADINNALSSAKITATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGMRILCDDVR 341
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLE+QIRT +MH A
Sbjct: 342 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEIQIRTNDMHRTA 401
Query: 299 EFGFAAHWRYKEGDCQH------SSFVLQMVEWARWVLTWQCEA 336
EFG AAHWRYKEG + + + + W R +L WQ EA
Sbjct: 402 EFGIAAHWRYKEGGYRDRKGRKTDTAEIDDMAWMRQLLDWQREA 445
>gi|359421083|ref|ZP_09213013.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia araii NBRC 100433]
gi|358242948|dbj|GAB11082.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia araii NBRC 100433]
Length = 819
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/345 (42%), Positives = 208/345 (60%), Gaps = 19/345 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGD Y+ H + A +LA +G ++T + A LLHDT++D S + I FG VA LV+
Sbjct: 127 RKSGDSYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLEQITGDFGPEVAHLVD 186
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 187 GVTKLDKVA--------LGTAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 238
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 239 EKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKRYEEIVRLVADRAPSRDTY 298
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + + QAL +S +V GR K +SI+ KM+ K D+IHD+ G+R++ E+
Sbjct: 299 LARVRDDIGQALAGARLSAIV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCEDVR 357
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH A
Sbjct: 358 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTQDMHRTA 417
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHWRYKE G + + + W R +L WQ EA
Sbjct: 418 EFGIAAHWRYKESGYRDRKGQKRAELAEIDDMAWMRQLLDWQREA 462
>gi|258653541|ref|YP_003202697.1| (p)ppGpp synthetase I SpoT/RelA [Nakamurella multipartita DSM
44233]
gi|258556766|gb|ACV79708.1| (p)ppGpp synthetase I, SpoT/RelA [Nakamurella multipartita DSM
44233]
Length = 822
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 206/340 (60%), Gaps = 14/340 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FG VA LV
Sbjct: 135 FRRSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTEYTLEKVTADFGDEVAHLV 194
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ EA+ + M +AMA D R +++KLADRLHNM T+ LP
Sbjct: 195 DGVTKLDKVR--------FGDATEAETIRKMIIAMAEDPRVLVVKLADRLHNMRTMRFLP 246
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+ ++ E+ + + +
Sbjct: 247 PDKQARKARETLEVLAPLAHRLGMATIKWELEDLAFSILHSKRYDEIVRLVADRAPSRDT 306
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + ++LE L I V+ GR K YSI+ KM + DEIHD+ +R++V +
Sbjct: 307 YLAAVTQQLEAELTAAKIPGQVV-GRGKHYYSIYQKMKARGREFDEIHDLVAVRILVGSV 365
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH LWA +PG+ KDYI +P++ YQSLHT V G PLEVQIRT +MH
Sbjct: 366 RECYAAMGVVHALWAPMPGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTFDMHHT 425
Query: 298 AEFGFAAHWRYKEGDCQH--SSFVLQMVEWARWVLTWQCE 335
AE+G AAHWRYKE H +S + + W R +L WQ E
Sbjct: 426 AEYGIAAHWRYKETRGTHAGASATVDEMAWMRQLLDWQRE 465
>gi|430750699|ref|YP_007213607.1| RelA/SpoT family (p)ppGpp synthetase [Thermobacillus composti KWC4]
gi|430734664|gb|AGA58609.1| (p)ppGpp synthetase, RelA/SpoT family [Thermobacillus composti
KWC4]
Length = 730
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 244/450 (54%), Gaps = 45/450 (10%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +L + + T A LLHD ++D ++ D + FG +A LV
Sbjct: 37 VRKSGEPYIEHPVAVAEILVNMQMDVTSAVAALLHDVVEDTNVTLDDLRERFGETLAMLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+G++KL ++ ++E + + MF+AMA D R +LIKLADRLHNM TL
Sbjct: 97 DGLTKLERIQFRSKEEQ------QNENYRKMFVAMAQDIRVILIKLADRLHNMRTLKFQS 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
++R A ETLEI+ P+A+RLG+S K ++E++ ++LNP Q+ +++ + + E
Sbjct: 151 EEAQRRIAHETLEIYCPIAHRLGMSAIKWEMEDIALRYLNPQQYYRIANLMQKKRAEREQ 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ IE++ + L + I + GR K +YSI+ KM +K +EI+D+ +R+IV+N
Sbjct: 211 YIADVIERIREKLAEMGIQGDI-SGRPKHIYSIYKKMTEKNKQFNEIYDLLAIRIIVDNL 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H LW +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 270 KDCYATLGIIHTLWRPMPGRFKDYIAMPKANMYQSLHTTVIGPNGEPLEVQIRTWEMHRT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFP 357
+E+G AAHW YKEG ++ + V+W R +L Q EA R +S+K F
Sbjct: 330 SEYGIAAHWAYKEGQTNPNAGFGEKVKWFREILDLQNEA----RDAAEFMESLK--MDFF 383
Query: 358 SHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGF 417
S D F + P+ G VF E P S +D R + G
Sbjct: 384 S---DLVFVFSPK----GEVF------------ELPAGSVPLDFAYRVHTEVGNRT-IGA 423
Query: 418 PLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
+ + P L+H KLK GD+VE+
Sbjct: 424 KVNGRIVP-LDH--------KLKTGDIVEI 444
>gi|409990716|ref|ZP_11274054.1| (p)ppGpp synthetase I [Arthrospira platensis str. Paraca]
gi|291567306|dbj|BAI89578.1| (p)ppGpp 3-pyrophosphohydrolase [Arthrospira platensis NIES-39]
gi|409938424|gb|EKN79750.1| (p)ppGpp synthetase I [Arthrospira platensis str. Paraca]
Length = 764
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 204/340 (60%), Gaps = 12/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G+++ +VAAG LHD ++D ++ + + FG V LVE
Sbjct: 61 RKSGEPYINHPIAVAGLLRFLGSDTAMVAAGFLHDIIEDTDVTPEELESNFGPEVRHLVE 120
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+ N + + +A+ MFLAMA D R +++KLADRLHNM TL+ +
Sbjct: 121 GVTKLSKF------NFSNTTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEFMSE 174
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A ET EIF PLANRLGI K +LE+L FK++ P+ + E+ ++ + E
Sbjct: 175 SKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEAYREIQIRVADRRAIREEK 234
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + + L ++ I + GR K LY I+ KM ++ EI+DI LRLIVE E
Sbjct: 235 LAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQFHEIYDIAALRLIVETNE 294
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH A
Sbjct: 295 ECYRALAIVHDSFRPIPGRFKDYIGLPKANRYQSLHTGVIGNTGRPVEVQIRTVEMHHIA 354
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
E+G AAHW+YKE + + E W R +L WQ +
Sbjct: 355 EYGIAAHWKYKETGGSEFGKLTETDEKFTWLRQLLEWQSD 394
>gi|257090255|ref|ZP_05584616.1| RelA/SpoT family protein [Enterococcus faecalis CH188]
gi|312902753|ref|ZP_07761957.1| GTP diphosphokinase [Enterococcus faecalis TX0635]
gi|422690313|ref|ZP_16748370.1| GTP diphosphokinase [Enterococcus faecalis TX0630]
gi|422702134|ref|ZP_16759974.1| GTP diphosphokinase [Enterococcus faecalis TX1342]
gi|256999067|gb|EEU85587.1| RelA/SpoT family protein [Enterococcus faecalis CH188]
gi|310633807|gb|EFQ17090.1| GTP diphosphokinase [Enterococcus faecalis TX0635]
gi|315169383|gb|EFU13400.1| GTP diphosphokinase [Enterococcus faecalis TX1342]
gi|315576684|gb|EFU88875.1| GTP diphosphokinase [Enterococcus faecalis TX0630]
Length = 737
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA G LHD ++D ++ D + FG +A LV
Sbjct: 43 VRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDVTLDDLKEEFGEDIAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M LAMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q+ + + + DE A
Sbjct: 157 EDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQYYRIVNLMQSKRDEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V A+E + A +D I + + GR K +YSI+ KM +K +EI+D+ +R+IV++
Sbjct: 217 YVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQS+HT V G P+EVQIRT EMH
Sbjct: 276 KDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGPKGNPVEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 336 AEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|359687928|ref|ZP_09257929.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418750353|ref|ZP_13306639.1| putative GTP diphosphokinase [Leptospira licerasiae str. MMD4847]
gi|418758451|ref|ZP_13314633.1| GTP diphosphokinase [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384114353|gb|EIE00616.1| GTP diphosphokinase [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404272956|gb|EJZ40276.1| putative GTP diphosphokinase [Leptospira licerasiae str. MMD4847]
Length = 677
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 240/448 (53%), Gaps = 44/448 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V++AG+LHD ++D + + + R FG + LV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVISAGILHDVIEDTKYTKEDMVRDFGTEITQLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+SQ+ ++E T A+ + + +A + D R +LIKLAD+ HNM TL P
Sbjct: 104 EGVTKISQIKSQSKE------TEAAENIRKIIIATIQDIRVILIKLADKTHNMRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
K++R A ETL ++ P+A RLGI + K +LE+L F+ + P+++ ++ ++ E
Sbjct: 158 PEKQRRIANETLSLYAPIAGRLGIYSVKSELEDLAFQVIFPEEYQDIKKRISAKKSER-- 215
Query: 180 TSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
IEKL+ LK + + + GR K +SI+ KM K+ T DEI D+ +R++ +
Sbjct: 216 EDYIEKLQLILKQRLAEIQINANVEGRAKHFFSIYRKMKTKEKTFDEIFDLRAIRIVTDE 275
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY L +VH LW+ VPG+ KDYI PK N YQSLHT V G PLEVQIRT EM+
Sbjct: 276 IKDCYGVLGIVHTLWSPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTAEMNA 335
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF 356
AEFG AAHW YKEG H++ V+W + TWQ DS P F
Sbjct: 336 IAEFGIAAHWVYKEGKT-HANERHLTVKWLEVLQTWQ--------------DSSLDPKEF 380
Query: 357 PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRG------SS 410
++ + H+ VFV K + + P +TV+D R +
Sbjct: 381 ---LEELKYDL-----HEDEVFVF---TPKGEIIQLPKGATVLDFAFRIHTDVGLHCKGA 429
Query: 411 RWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ + PL+ ELR + V D R K
Sbjct: 430 KINGRMIPLRTELRSGDQVEVVVDKRSK 457
>gi|284105197|ref|ZP_06386190.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Candidatus
Poribacteria sp. WGA-A3]
gi|283830148|gb|EFC34409.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Candidatus
Poribacteria sp. WGA-A3]
Length = 728
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 228/409 (55%), Gaps = 43/409 (10%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL H V A +L + + T + AGLLHDTL+D + + + FG VA LVE
Sbjct: 44 RRSGEPYLQHPVAVAGILTFLKLDVTAIVAGLLHDTLEDTVATQEELQTHFGHEVAHLVE 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPL 120
GV+K+ Q+ E +A+ M L+MAD R V IKLADRLHNM TL LP
Sbjct: 104 GVTKIGQIPFRTYEEK------QAENFRKMLLSMADDIRVVFIKLADRLHNMRTLGHLPE 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+++ A+ETLEI+ PLANRLG+S K +LE+LCF++L + ++ L ++ + +E V+
Sbjct: 158 DKQKQIAQETLEIYSPLANRLGMSWLKQELEDLCFQYLKTEAYSLLKLRVAQRDEERQVS 217
Query: 181 --SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
S I++ AL + V+ GR K LYSIH KM + +T +E+HD+ +R+I +
Sbjct: 218 VQSIIQETVDALAAAELPGHVV-GRPKHLYSIHQKMESQGITFEEVHDLVAIRIITGTKS 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY L +VH LW VPG+ KDYI P+ N YQSLHT V G +E QIRT+EMH A
Sbjct: 277 NCYTILGLVHSLWPPVPGRFKDYIATPRTNLYQSLHTTVLGPQGDHVEFQIRTEEMHRLA 336
Query: 299 EFGFAAHWRYKEG------DCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKP 352
E+G AAHWRYKE D + S++ Q VEW + +S +R + DS+K
Sbjct: 337 EYGVAAHWRYKEQVKVDDRDEKVFSWLRQFVEWHK--------DLSDNRQFM---DSVKL 385
Query: 353 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 401
D F++ P K V+E P +T +D
Sbjct: 386 DLFHLDVFHDVVFAFTP----------------KGEVKELPLGATPVDF 418
>gi|116513948|ref|YP_812854.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|116093263|gb|ABJ58416.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 754
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 195/321 (60%), Gaps = 19/321 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D I FGA VA +V+
Sbjct: 44 RASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + K A+ M +AMA D R +L+KLADRLHNM TL+ L
Sbjct: 104 GVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLLR 157
Query: 121 CKRQR-FAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD---- 175
+QR A ETL+I+ PLA+RLGI T K +LE++ F ++NP E K+V D
Sbjct: 158 PDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP----EAYYKIVSMMDAKRS 213
Query: 176 --EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
E + AI+ L L I + + GR K +YSI+ KM+ K +EI+D+ +R+I
Sbjct: 214 EREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNKHKNFNEIYDLLAVRVI 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V +DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+E
Sbjct: 273 VPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTEE 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQ 314
MH AE+G AAHW YK G+ Q
Sbjct: 333 MHKVAEYGVAAHWAYKRGNFQ 353
>gi|167629913|ref|YP_001680412.1| GTP pyrophosphokinase [Heliobacterium modesticaldum Ice1]
gi|167592653|gb|ABZ84401.1| GTP pyrophosphokinase [Heliobacterium modesticaldum Ice1]
Length = 736
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 204/338 (60%), Gaps = 10/338 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A +LA + + +AAGLLHD ++D ++ + + + FG VA +V
Sbjct: 40 LRKSGEPYIYHPMAVAYILADLELDVATIAAGLLHDVVEDTAITQEQLEKDFGPEVALMV 99
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+L +++ + + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 100 DGVTKLSRLEFHSKQEQ------QVESLRKMFLAMAKDIRVILIKLADRLHNMRTLKHQT 153
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K++ A ET+E+F PLANRLGIS K +LE+L ++L P+ + +L +++ E
Sbjct: 154 PEKQREIAIETIELFAPLANRLGISRIKWELEDLALRYLEPETYYDLVTRIATKRAEREE 213
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I L + L I + GR K YSI+ KM +K + EI+D+ +R++V++
Sbjct: 214 RINEIIAILREKLAAVGIKAEI-SGRPKHFYSIYRKMTSQKKDLSEIYDLIAVRVLVDSV 272
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL ++H +W +P + KDYI PK N YQSLHT + G P EVQIRT EMH
Sbjct: 273 KDCYGALGIIHTIWKPIPMRFKDYIATPKTNMYQSLHTTLVGPLGEPFEVQIRTAEMHRT 332
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKEG + + W R +L WQ +
Sbjct: 333 AEYGIAAHWKYKEGGKTQGRSFEEKLAWLRQLLEWQSD 370
>gi|377567607|ref|ZP_09796815.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia terrae NBRC 100016]
gi|377535147|dbj|GAB41980.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia terrae NBRC 100016]
Length = 794
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 203/344 (59%), Gaps = 19/344 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 104 RKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQALEKDFGPEVAHLVD 163
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 164 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 215
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE---LSSKLVECFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E L + D
Sbjct: 216 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLGADRAPSRDTY 275
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ E +
Sbjct: 276 LARVRAD-INNALAGARINATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGMRILCEED 333
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P+F Y SLHT V G PLEVQIRT EMH
Sbjct: 334 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYMSLHTTVIGPEGKPLEVQIRTHEMHRT 393
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
AEFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 394 AEFGIAAHWRYKENGYRKSGKKSDTAEIDDMAWMRQLLDWQREA 437
>gi|404497180|ref|YP_006721286.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter metallireducens GS-15]
gi|418066658|ref|ZP_12704018.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter metallireducens RCH3]
gi|78194783|gb|ABB32550.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter metallireducens GS-15]
gi|373560151|gb|EHP86423.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter metallireducens RCH3]
Length = 716
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 210/338 (62%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H +E A LLA + + V GLLHDT++D + + + FGA VA+LV+
Sbjct: 39 RLSGEPYLVHPMEVAGLLADLRLDVPTVVTGLLHDTIEDTLTTREELEGLFGAEVANLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+S++ +E + +A+ M LAMA D R +L+KLADRLHNM TL P
Sbjct: 99 GVTKISKIHFKTKEES------QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K++ A+ETL+I+ P+ANRLGIS K +LE+L F++L P + +L+SK+ + E
Sbjct: 153 PKQRSIARETLDIYAPIANRLGISWIKSELEDLSFRYLEPQIYYDLASKVTKKKKER--E 210
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
S ++++ + + DK + + + GR K LYSI KM + + +D+I+D+ +R++V +
Sbjct: 211 SYVDEVRKIIVDKLVEHDIKGEVFGRSKHLYSIWRKMQSRSVDIDQIYDLIAIRVMVNDI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY+ L ++H W +PG+ KDYI PK N YQSLHT V G +EVQIRT +MH
Sbjct: 271 RECYEVLGLIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGERMEVQIRTYDMHGV 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 331 AEAGIAAHWKYKEGKGYDEKEVKRFA-WLRQLLEWQQE 367
>gi|134295029|ref|YP_001118764.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia vietnamiensis G4]
gi|387901650|ref|YP_006331989.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia sp. KJ006]
gi|134138186|gb|ABO53929.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia vietnamiensis G4]
gi|387576542|gb|AFJ85258.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia sp. KJ006]
Length = 788
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 205/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++V+N
Sbjct: 264 ISKILEAAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDNPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + + +W + +L Q EA
Sbjct: 383 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 420
>gi|386074939|ref|YP_005989257.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. IPAV]
gi|353458729|gb|AER03274.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. IPAV]
Length = 674
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 241/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S + + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HN+ TL P
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNLRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW PG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPAPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPEGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|227903817|ref|ZP_04021622.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
gi|227868704|gb|EEJ76125.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
Length = 749
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 200/318 (62%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + +AAG LHDT++D ++ D + FG V+ +V+
Sbjct: 47 RASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHDTVEDTPVTNDELKEKFGEDVSFIVD 106
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ E N+ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 107 GVTKLNKY-----EYNSHQEFL-AENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRP 160
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 161 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 216
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E ++ I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV
Sbjct: 217 REKYISDTIKTLKKTLDELGIKYDIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIV 275
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++M
Sbjct: 276 KNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEQM 335
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 336 HEVAEYGVAAHWAYKRGN 353
>gi|384044791|ref|YP_005492808.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus megaterium
WSH-002]
gi|345442482|gb|AEN87499.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus megaterium
WSH-002]
Length = 732
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 210/339 (61%), Gaps = 12/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + +AAG LHD ++D ++ + + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLDMDPATIAAGFLHDVVEDTEITLKDLEKAFNEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSKEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+++ + + + +I + + GR K +YSI+ KM + +EI+D+ +R+IV + +
Sbjct: 218 LAEVIDEVREQVDEVSIK-VEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIIVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKQNMYQSLHTTVIGPKGDPLEVQIRTFDMHQIA 336
Query: 299 EFGFAAHWRYKEGD-CQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW YKEG +H+SF ++ W R +L +Q +A
Sbjct: 337 EYGIAAHWAYKEGKTAEHASFEEKLT-WFREILEFQNDA 374
>gi|227549163|ref|ZP_03979212.1| GTP pyrophosphokinase [Corynebacterium lipophiloflavum DSM 44291]
gi|227078723|gb|EEI16686.1| GTP pyrophosphokinase [Corynebacterium lipophiloflavum DSM 44291]
Length = 758
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/342 (44%), Positives = 209/342 (61%), Gaps = 18/342 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A + IG ++T + A LLHDT++D S + FG VA LV+
Sbjct: 71 RKSGDPYITHPLAVATICGEIGMDTTTLVAALLHDTVEDTEYSLADLSADFGPEVAKLVD 130
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 131 GVTKLDKVALGA--------AAEAETIRKMIVAMAEDPRVLVIKVADRLHNMRTMRFLPP 182
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE---LSSKLVECFDEA 177
K+ + AKETL++ PLA+RLG++T K +LE+L F L P ++ E L + D A
Sbjct: 183 EKQAKKAKETLDVIAPLAHRLGMATVKWELEDLAFAILYPKKYEEIVRLVADRAPSRDRA 242
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +LE LK +IS V+ GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 243 L-GEIKAQLEAELKASSISAEVM-GRPKHYWSIYQKMVVRGHEFDEIFDLVGIRVLVDNV 300
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH L++ +PG+ KDYI+ P+F YQSLHT V + PLEVQ+RT EMH
Sbjct: 301 HDCYAAIGVVHSLYSVMPGRFKDYISNPRFGVYQSLHTTVMTDSGRPLEVQVRTHEMHYN 360
Query: 298 AEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE H + V QM W R +L WQ EA
Sbjct: 361 AEFGVAAHWRYKETKGSHKGDQAEVDQMA-WMRQLLDWQKEA 401
>gi|376294946|ref|YP_005166176.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio desulfuricans ND132]
gi|323457507|gb|EGB13372.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
ND132]
Length = 737
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 210/344 (61%), Gaps = 25/344 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A LLA + + VAAGLLHDT++D + D I FG+ VAD+V
Sbjct: 38 VRRSGEPYISHPMNVAYLLADMQLDEATVAAGLLHDTVEDTDTTVDEIEELFGSDVADIV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+K+S++ + SK V+ A+ + + LAMA D R +++KLADRLHNM TL+ +
Sbjct: 98 DGVTKISRM-------DFESKAVQQAENIRKLILAMAEDIRVLMVKLADRLHNMRTLEYM 150
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
K++ A+ET +I+ PLANRLG+ K +LE+LC ++L PD + +LS + E E
Sbjct: 151 KPVKQRLIAQETQDIYAPLANRLGLHRVKTELEDLCLRYLRPDVYAQLSEAVHEHRAAGE 210
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I + LK I V GR K L+SI KM ++ LT DEI+D+ R+IV +
Sbjct: 211 PYIDKVIGLITDMLKKNKIKGRVF-GRTKHLHSIQVKMEQQGLTFDEIYDLIAFRVIVGS 269
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY L ++H W VPG+ KDYI+ PK N YQSLHT V G +E+QIRT+EMH
Sbjct: 270 LKDCYAVLGLIHAAWRPVPGRFKDYISIPKANMYQSLHTTVMGPDGERIEIQIRTEEMHR 329
Query: 297 QAEFGFAAHWRYKE-------------GDCQHSSFVLQMVEWAR 327
AE+G AAHW+YKE D + +++ Q+++W R
Sbjct: 330 IAEYGVAAHWQYKEVGKGAKKGKTAGRRDAERYTWLKQIMDWQR 373
>gi|51893575|ref|YP_076266.1| GTP pyrophosphokinase [Symbiobacterium thermophilum IAM 14863]
gi|51857264|dbj|BAD41422.1| GTP pyrophosphokinase [Symbiobacterium thermophilum IAM 14863]
Length = 735
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 141/337 (41%), Positives = 204/337 (60%), Gaps = 12/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A ++A++ + +AA LLHD L+D + Y+ + FG VA LV+
Sbjct: 42 RRSGEPYITHPIAVAEIVASLELDEESIAAALLHDVLEDCGVKYEELEERFGKEVATLVD 101
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +L +R+ + + L MFLAMA D R +LIKLADRLHNM TL P
Sbjct: 102 GVSKLDRLQFTSRDE------AQVENLRKMFLAMAKDLRVILIKLADRLHNMRTLKHQPS 155
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
+ R A+ET++I+ PLA+RLG+S K +LE+L F+ L PD++ E++ + E M
Sbjct: 156 DAQVRIAQETMDIYAPLAHRLGLSEIKWELEDLAFRILEPDRYQEMAYLVARKRQERMAI 215
Query: 181 SA--IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +++L + L+ + I + GR K YSI+ KM ++ + +I+D+ +R+IVE +
Sbjct: 216 TQDLMDQLREVLEKEGIQAEI-SGRPKHFYSIYKKMYRQGKDISQIYDLIAIRIIVEEVK 274
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +P + KDYI PK N YQSLHT V G P E+QIRT+EMH A
Sbjct: 275 DCYAVLGIIHSHWKPLPLRFKDYIATPKPNMYQSLHTTVIGPHGEPFEIQIRTREMHRTA 334
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
EFG AAHW YKEG + ++W R +L W E
Sbjct: 335 EFGVAAHWSYKEGKTDKE--FDRKLQWLRSLLEWHQE 369
>gi|365157987|ref|ZP_09354230.1| GTP pyrophosphokinase [Bacillus smithii 7_3_47FAA]
gi|363622166|gb|EHL73337.1| GTP pyrophosphokinase [Bacillus smithii 7_3_47FAA]
Length = 730
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 206/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H V+ A +LA + + VAAG LHD ++D ++ + + R F +A LV+
Sbjct: 44 RKSGEPYIMHPVQVAGILADLEMDPATVAAGFLHDVVEDTEMTLEDLKREFNEEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MFLAMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEEQ------QAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPA 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 181 SAIEKLEQALKDKNISFLV-LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEED 239
E + K +S + GR K +YSI+ KM+ K +EI+D+ +R++V + +D
Sbjct: 218 LEEVVEEVRERLKEVSIEAEISGRPKHIYSIYRKMVIKNKQFNEIYDLLAVRILVNSIKD 277
Query: 240 CYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAE 299
CY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH AE
Sbjct: 278 CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFDMHRIAE 337
Query: 300 FGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEA 336
+G AAHW YKEG ++SSF ++ W R +L +Q E+
Sbjct: 338 YGVAAHWAYKEGKTLDENSSFEKKL-SWFREILEFQKES 375
>gi|333394996|ref|ZP_08476815.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|336392924|ref|ZP_08574323.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 746
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 201/316 (63%), Gaps = 14/316 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 43 FRQSGEPYIVHPIQVAAILAELKMDPATVASGFLHDVVEDTNITLGDIQELFGHDVAVIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ +A ++ A + M LAMA D R V++KLADRLHNM TL L
Sbjct: 103 DGVTKLSKIKYVAHKDELA------ENHRKMILAMAKDLRVVMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETLEI+ PLA+RLGIS +K +LE+ ++LNP Q+ ++SK +
Sbjct: 157 PEKQRRIANETLEIYAPLADRLGISQFKWELEDTALRYLNPQQYYRIVHLMNSKRAQR-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
+A + AI++++ ++ D NI + + GR K +YSI+ KM K +EI+D+ +R+IV+
Sbjct: 215 QAYIDEAIKQIKASMTDFNIKYEIY-GRPKHIYSIYKKMRDKHKQFEEIYDLLAIRVIVD 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQSLHT V G PLE+QIRT+EMH
Sbjct: 274 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGQPLEIQIRTEEMH 333
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 334 QVAEYGVAAHWAYKEG 349
>gi|294501369|ref|YP_003565069.1| GTP pyrophosphokinase [Bacillus megaterium QM B1551]
gi|295706716|ref|YP_003599791.1| GTP pyrophosphokinase [Bacillus megaterium DSM 319]
gi|294351306|gb|ADE71635.1| GTP pyrophosphokinase [Bacillus megaterium QM B1551]
gi|294804375|gb|ADF41441.1| GTP pyrophosphokinase [Bacillus megaterium DSM 319]
Length = 732
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 210/339 (61%), Gaps = 12/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + +AAG LHD ++D ++ + + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLDMDPATIAAGFLHDVVEDTEITLKDLEKAFNEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSKEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+++ + + + +I + + GR K +YSI+ KM + +EI+D+ +R+IV + +
Sbjct: 218 LAEVIDEVREQVDEVSIK-VEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIIVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT +MH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKQNMYQSLHTTVIGPKGDPLEVQIRTFDMHQIA 336
Query: 299 EFGFAAHWRYKEGD-CQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW YKEG +H+SF ++ W R +L +Q +A
Sbjct: 337 EYGIAAHWAYKEGKTAEHASFEEKLT-WFREILEFQNDA 374
>gi|315038166|ref|YP_004031734.1| ppGpp synthetase [Lactobacillus amylovorus GRL 1112]
gi|325956617|ref|YP_004292029.1| ppGpp synthetase [Lactobacillus acidophilus 30SC]
gi|385817505|ref|YP_005853895.1| ppGpp synthetase [Lactobacillus amylovorus GRL1118]
gi|312276299|gb|ADQ58939.1| ppGpp synthetase [Lactobacillus amylovorus GRL 1112]
gi|325333182|gb|ADZ07090.1| ppGpp synthetase [Lactobacillus acidophilus 30SC]
gi|327183443|gb|AEA31890.1| ppGpp synthetase [Lactobacillus amylovorus GRL1118]
Length = 746
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 195/318 (61%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D + FG VA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVTNDELKEKFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 104 GVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 158 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV
Sbjct: 214 REKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+ M
Sbjct: 273 KNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEAM 332
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 333 HQVAEYGVAAHWAYKRGN 350
>gi|197121709|ref|YP_002133660.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. K]
gi|220916506|ref|YP_002491810.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-1]
gi|196171558|gb|ACG72531.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. K]
gi|219954360|gb|ACL64744.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-1]
Length = 746
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 206/345 (59%), Gaps = 27/345 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL+H +E A +LA + + + V GLLHDT++D + I FG +ADLV
Sbjct: 59 IRKSGEPYLVHPLEVAGILAELKLDESSVVTGLLHDTIEDTLATKKEISELFGPEIADLV 118
Query: 61 EGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLD 116
+GV+KLSQ TA+ T E A+ M +AMA D R +L+KLADR HNM TLD
Sbjct: 119 DGVTKLSQF--------TAANTQEEKQAENFRKMVVAMAKDIRVLLVKLADRTHNMRTLD 170
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD 175
A+ ++R A+ETL+I+ PLANRLGI K +LE L FK+L P ++EL+ K+ V +
Sbjct: 171 AMKPESQERIARETLDIYAPLANRLGIQWIKTELEELSFKYLRPGDYSELNEKVSVRARE 230
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E V +E + + L + + V GR K +YSI+ KM + + ++I D+ G R+IV
Sbjct: 231 KERFVAEVVEIIRRRLAEAGMQADV-SGRVKHVYSIYRKMRQLDVDFEQIQDVVGFRVIV 289
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +CY++L VH LW VPG+ KDYI PK N YQSLHT V G +EVQIRT+EM
Sbjct: 290 DTVAECYESLGFVHSLWKPVPGRFKDYIAIPKPNLYQSLHTTVVGPAGERIEVQIRTREM 349
Query: 295 HLQAEFGFAAHWRYKE------------GDCQHSSFVLQMVEWAR 327
H AE G AAHW YKE D ++ Q+VE+ R
Sbjct: 350 HRIAEEGVAAHWAYKEKGRDGKGAELSRKDAASFGWLRQLVEFQR 394
>gi|373857672|ref|ZP_09600413.1| RelA/SpoT family protein [Bacillus sp. 1NLA3E]
gi|372452804|gb|EHP26274.1| RelA/SpoT family protein [Bacillus sp. 1NLA3E]
Length = 731
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 205/339 (60%), Gaps = 13/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + VAAG LHD ++D ++ + I F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILADLEMDPETVAAGFLHDVVEDTSVTLEDIKTAFNDEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPF 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKVKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IE++ + + +I L GR K +YSI+ KM + +EI+D+ +R+IV + +
Sbjct: 218 LVDVIEEVRARMGEVSIK-AELSGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIIVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTSEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQH--SSFVLQMVEWARWVLTWQCE 335
EFG AAHW YKEG SS+ ++ W R +L +Q E
Sbjct: 337 EFGIAAHWAYKEGKSASDISSYEAKLT-WFREILEFQNE 374
>gi|119493798|ref|ZP_01624366.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
sp. PCC 8106]
gi|119452440|gb|EAW33628.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
sp. PCC 8106]
Length = 755
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 150/339 (44%), Positives = 205/339 (60%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G+ TV+AAG LHD ++D ++ D + FG+ V LVE
Sbjct: 60 RKSGEPYINHPIAVAGLLRYLGSEGTVIAAGFLHDIIEDTEVTPDELESHFGSEVRQLVE 119
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS+ N ++KT +A+ MFLAMA D R +++KLADRLHNM TL+ LP
Sbjct: 120 GVTKLSKF-------NFSNKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEFLP 172
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
KR+ A ET EIF PLA+RLGI +K +LE+L FK+L P+ + E+ S + + E
Sbjct: 173 DHKRRSIALETREIFAPLAHRLGIGRFKWELEDLSFKYLEPEAYREIQSLVADKRNIREE 232
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + L L+ I + GR K L+ I+ KM + EI+D+ LR+IVE
Sbjct: 233 KLAEVADFLRTRLEKAGIKSYEVNGRPKHLHGIYRKMHNHQKQFHEIYDLAALRVIVETN 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+ L +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH
Sbjct: 293 EECYRTLAIVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGSTGRPIEVQIRTVEMHHI 352
Query: 298 AEFGFAAHWRYKE-GDCQHS--SFVLQMVEWARWVLTWQ 333
AE+G AAHW+YKE G ++ S W R +L WQ
Sbjct: 353 AEYGIAAHWKYKETGGSNYAKMSNSDDKFTWLRQLLEWQ 391
>gi|342213759|ref|ZP_08706478.1| GTP diphosphokinase [Veillonella sp. oral taxon 780 str. F0422]
gi|341597347|gb|EGS39906.1| GTP diphosphokinase [Veillonella sp. oral taxon 780 str. F0422]
Length = 741
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 203/336 (60%), Gaps = 11/336 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+LH + A +L+ + + + + + LLHD ++D +S + I FG VA LV+
Sbjct: 54 RASGEPYILHPLGVATILSELQIDRSTLVSALLHDVVEDTEISLEEIEEQFGPEVAFLVD 113
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+Q +E + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 114 GVTKLNQFQYQTKEEQ------QIENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRP 167
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+QR A+ETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ E E +
Sbjct: 168 DKQQRIAQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPEKYYDLVQQMSEKRQAREDI 227
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + L+ AL+ +I V GR K YSI+ KM K + +I+D+Y +R+IV+
Sbjct: 228 VNDTMNTLKDALEHAHIKADV-KGRPKHFYSIYKKMKKDNRDLSQIYDLYAVRVIVDTIP 286
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L VH LW +P + KDYI PK N YQSLHT V G P+E+QIRT +MH +
Sbjct: 287 DCYAVLGTVHSLWKPLPYRFKDYIAMPKSNMYQSLHTTVIGTKGQPVEIQIRTWDMHRVS 346
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQ 333
E+G AAHWRYKEG+ + V W R VL WQ
Sbjct: 347 EYGVAAHWRYKEGNKGKAEADFDAKVGWIRHVLEWQ 382
>gi|431794423|ref|YP_007221328.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784649|gb|AGA69932.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 729
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 205/340 (60%), Gaps = 11/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y+ H +E A +L + + +AA LHD ++D S + I + FG+ VA LV
Sbjct: 36 LRNSGEEYIQHPLEVAKILLELEMDEATIAAAFLHDVVEDTKYSVEDIEKEFGSQVALLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E ++ + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 96 DGVTKLGRIEYKSKEE------LQVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKFHS 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++ A+ET+EIF PLANRLGI K +LE+L F++L P ++ +LS L E
Sbjct: 150 EKKQKEIAQETIEIFAPLANRLGIFRIKWELEDLSFRYLKPQEYYDLSEGIALKRAEREV 209
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L L + I + GR K YSI+ KM+ + + EI+D+ +R+IV++
Sbjct: 210 QINEVITQLRSRLSEVGIRADI-SGRPKHFYSIYRKMINQHKELSEIYDLTAVRVIVDSV 268
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL ++H LW +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 269 NDCYGALGIIHTLWKPLPGRFKDYIAMPKPNMYQSLHTTLVGAHGEPFEIQIRTWEMHRT 328
Query: 298 AEFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQCEA 336
AE+G AAHW+YKEG + + Q + W R +L WQ ++
Sbjct: 329 AEYGIAAHWKYKEGAGRPAGGNFEQKLSWLRQLLEWQHDS 368
>gi|107022080|ref|YP_620407.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cenocepacia AU 1054]
gi|116689024|ref|YP_834647.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cenocepacia HI2424]
gi|254246040|ref|ZP_04939361.1| RelA/SpoT protein [Burkholderia cenocepacia PC184]
gi|105892269|gb|ABF75434.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia cenocepacia AU 1054]
gi|116647113|gb|ABK07754.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia cenocepacia HI2424]
gi|124870816|gb|EAY62532.1| RelA/SpoT protein [Burkholderia cenocepacia PC184]
Length = 788
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 206/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKNELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YS++ KM K+L+ ++ D+YG R++V++
Sbjct: 264 ISKILEAAQRAMADAKIDAEI-TGREKTIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G S + +W + +L Q EA
Sbjct: 383 EAGVAAHWLYKNGSADLSDVQKRAHQWLKSLLDIQSEA 420
>gi|420144910|ref|ZP_14652389.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403467|gb|EJN56709.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 746
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 201/316 (63%), Gaps = 14/316 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + + VA+G LHD ++D ++ I FG VA +V
Sbjct: 43 FRQSGEPYIVHPIQVAAILAELKMDPATVASGFLHDVVEDTNITLGDIQELFGHDVAVIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ +A ++ A + M LAMA D R V++KLADRLHNM TL L
Sbjct: 103 DGVTKLSKIKYVAHKDELA------ENHRKMILAMAKDLRVVMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETLEI+ PLA+RLGIS +K +LE+ ++LNP Q+ ++SK +
Sbjct: 157 PEKQRRIANETLEIYAPLADRLGISQFKWELEDTALRYLNPQQYYRIVHLMNSKRAQR-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
+A + AI++++ ++ D NI + + GR K +YSI+ KM K +EI+D+ +R+IV+
Sbjct: 215 QAYIDEAIKQIKASMTDFNIKYEIY-GRPKHIYSIYKKMRDKHKQFEEIYDLLAIRVIVD 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +H W +PG+ KDYI PK N YQSLHT V G PLE+QIRT+EMH
Sbjct: 274 TIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGQPLEIQIRTEEMH 333
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 334 QVAEYGVAAHWAYKEG 349
>gi|387929855|ref|ZP_10132532.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
gi|387586673|gb|EIJ78997.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
Length = 731
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 208/339 (61%), Gaps = 13/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + VAAG LHD ++D ++ + + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILADLEMDPITVAAGFLHDVVEDTDVTLEEMREAFNDEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LPL
Sbjct: 104 GVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPL 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IE++ L + +I + GR K +YSI+ KM + +EI+D+ +R++V + +
Sbjct: 218 LDEVIEEVRNRLNEVSIKAEI-SGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIVVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHRIA 336
Query: 299 EFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW YKEG ++SSF ++ W R +L +Q +
Sbjct: 337 EYGIAAHWAYKEGKSVKENSSFEDKLT-WFREILEFQND 374
>gi|295130724|ref|YP_003581387.1| GTP Pyrophosphokinase, (p)ppGpp synthetase I [Propionibacterium
acnes SK137]
gi|291376046|gb|ADD99900.1| GTP Pyrophosphokinase, (p)ppGpp synthetase I [Propionibacterium
acnes SK137]
Length = 774
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 204/339 (60%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFCTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|82701185|ref|YP_410751.1| (p)ppGpp synthetase SpoT/RelA [Nitrosospira multiformis ATCC 25196]
gi|82409250|gb|ABB73359.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Nitrosospira multiformis ATCC 25196]
Length = 715
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 205/333 (61%), Gaps = 10/333 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H + A +L + +S +AA LLHD ++D +S I FG VA+LV
Sbjct: 50 FRQSGEPYISHPLAVASILGKLRLDSQTLAAALLHDVMEDTHVSKAEIGDRFGKSVAELV 109
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GVSKL ++ + + +A+ M LAMA D R +LIKLADRLHNM TL+A+
Sbjct: 110 DGVSKLDKIEFQSHAD------AQAENFRKMLLAMARDVRVILIKLADRLHNMRTLEAMR 163
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS--SKLVECFDEA 177
K++R A+ET+EI+ P+ANRLG++ +L++L F++L P ++ L+ ++
Sbjct: 164 PEKKRRIARETMEIYAPIANRLGLNNIYHELQDLSFRYLYPRRYRVLTNATRAARGNRRE 223
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
MVT +E ++Q LK + V GR K LYSI+ KM++K L+ EI DIYG R+IV++
Sbjct: 224 MVTKILETMKQRLKTAGLDAEV-TGREKQLYSIYKKMVEKHLSFSEILDIYGFRVIVKDV 282
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY AL +H L+ +PGK KDYI PK NGYQSLH+ + G P+E+QIRT EMH
Sbjct: 283 ASCYIALGALHSLYNPIPGKFKDYIAIPKANGYQSLHSTLWGPYGTPIEIQIRTPEMHRI 342
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVL 330
AE G A+HW YK D + ++ +W + +L
Sbjct: 343 AEAGVASHWLYKSSDADLNDLNMKTHQWLQSLL 375
>gi|401564457|ref|ZP_10805350.1| GTP diphosphokinase [Selenomonas sp. FOBRC6]
gi|400188859|gb|EJO22995.1| GTP diphosphokinase [Selenomonas sp. FOBRC6]
Length = 743
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 207/340 (60%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGD Y++H + A +L + + + A LLHD ++D + + + FG + L+
Sbjct: 45 VRISGDAYIIHPLNVAYILTGLHLDDETICAALLHDVVEDTCATLEEMEAEFGKNIMALI 104
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 105 DGVTKLGRIEYMSKED------VQLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
KR R AKETLE++ PLANRLGIS KV+LE+LC ++L P+ + L ++ E
Sbjct: 159 EDKRHRIAKETLEVYAPLANRLGISNIKVELEDLCLRYLEPEAYYTLVEEVKHKRKERQE 218
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +IE++ + L+ I + GR K YSI+ KM + +++EI+D+ +R++V +
Sbjct: 219 FIRESIEQIREKLEAAGIKAEI-KGRAKHFYSIYRKMKRDNKSVNEIYDLSAVRVLVSSV 277
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G PLE+QIRTK MH
Sbjct: 278 KDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHGY-PLEIQIRTKAMHQV 336
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 335
+EFG AAHW+YKE + Q + W R +++ Q E
Sbjct: 337 SEFGVAAHWKYKEAGRSIGATDETDQKMSWLRQMVSLQKE 376
>gi|339441909|ref|YP_004707914.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[Clostridium sp. SY8519]
gi|338901310|dbj|BAK46812.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[Clostridium sp. SY8519]
Length = 779
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 141/337 (41%), Positives = 214/337 (63%), Gaps = 10/337 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H + A++LA + + + AGLLHD +D ++ + + F VA LV
Sbjct: 70 VRKSGEEYIIHPLCVAIILADLEMDKETIVAGLLHDVAEDTGMTLEELAEDFNDEVALLV 129
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+QLS A + V+A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 130 DGVTKLNQLSYDADKIE-----VQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMK 184
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++ A+ET+EI+ P+A RLGIS+ KV+LE+L K+L P+ + +L K+ E A
Sbjct: 185 PEKQKEKARETMEIYAPIAQRLGISSIKVELEDLSLKYLEPEAYYDLVEKIALRKKERDA 244
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V + +++++ + +I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++
Sbjct: 245 YVDALVKQVKSTIAAADIEATVY-GRAKHFFSIYKKMVNQDKTLDQIYDLFAIRIIVKDV 303
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+ + VPG+ KDYI PK N YQSLHT + G P E+QIRT+EMH
Sbjct: 304 KDCYAALGVIHEHYTPVPGRFKDYIAMPKPNMYQSLHTTLMGPNGQPFEIQIRTEEMHRT 363
Query: 298 AEFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQ 333
E+G AAHW+YKE + S + + W R +L WQ
Sbjct: 364 CEYGIAAHWKYKEANNGGGISGEEEKLSWLRQILEWQ 400
>gi|421100332|ref|ZP_15560964.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200901122]
gi|410796642|gb|EKR98769.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200901122]
Length = 674
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 240/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIIHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSVSEKNVK-VRWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|336054243|ref|YP_004562530.1| PpGpp synthetase [Lactobacillus kefiranofaciens ZW3]
gi|333957620|gb|AEG40428.1| PpGpp synthetase [Lactobacillus kefiranofaciens ZW3]
Length = 746
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 195/318 (61%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D + FG VA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVTNDELKEKFGEDVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 104 GVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 158 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R IV
Sbjct: 214 REKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRAIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++M
Sbjct: 273 KNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEQM 332
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 333 HEVAEYGVAAHWAYKRGN 350
>gi|421867271|ref|ZP_16298930.1| GTP pyrophosphokinase ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia H111]
gi|358072685|emb|CCE49808.1| GTP pyrophosphokinase ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia H111]
Length = 788
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 206/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKNELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YS++ KM K+L+ ++ D+YG R++V++
Sbjct: 264 ISKILEAAQRAMADAKIDAEI-TGREKTIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G S + +W + +L Q EA
Sbjct: 383 EAGVAAHWLYKNGSADLSDVQKRAHQWLKSLLDIQSEA 420
>gi|170732313|ref|YP_001764260.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cenocepacia MC0-3]
gi|169815555|gb|ACA90138.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia cenocepacia MC0-3]
Length = 788
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 206/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKNELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YS++ KM K+L+ ++ D+YG R++V++
Sbjct: 264 ISKILEAAQRAMADAKIDAEI-TGREKTIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G S + +W + +L Q EA
Sbjct: 383 EAGVAAHWLYKNGSADLSDVQKRAHQWLKSLLDIQSEA 420
>gi|385813969|ref|YP_005850362.1| PpGpp synthetase [Lactobacillus helveticus H10]
gi|323466688|gb|ADX70375.1| PpGpp synthetase [Lactobacillus helveticus H10]
Length = 749
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 195/318 (61%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + + AG LHDT++D ++ D + FG VA +V+
Sbjct: 47 RASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHDTVEDTPVTNDELKEKFGEDVAFIVD 106
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 107 GVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRP 160
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 161 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 216
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV
Sbjct: 217 REKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIV 275
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++M
Sbjct: 276 KNVRDCYAVLGAVHTEWKPIPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEQM 335
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 336 HEVAEYGVAAHWAYKRGN 353
>gi|294794004|ref|ZP_06759141.1| GTP diphosphokinase [Veillonella sp. 3_1_44]
gi|294455574|gb|EFG23946.1| GTP diphosphokinase [Veillonella sp. 3_1_44]
Length = 735
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 205/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A +LA + + + A L+HD ++D S + + FG+ VA LV
Sbjct: 46 FRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLV 105
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 106 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMR 159
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E
Sbjct: 160 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVRED 219
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V + +L +AL + +I + GR K YSI+ KM K + +I+D+ +R+IV++
Sbjct: 220 IVNDTMRQLTKALSEAHIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSI 278
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H LW +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 279 PDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 338
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 339 SEYGVAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 374
>gi|167758796|ref|ZP_02430923.1| hypothetical protein CLOSCI_01138 [Clostridium scindens ATCC 35704]
gi|167663536|gb|EDS07666.1| RelA/SpoT family protein [Clostridium scindens ATCC 35704]
Length = 781
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 219/346 (63%), Gaps = 13/346 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + +G+LHD ++D + + I R FG VA LV+
Sbjct: 83 RKSGEPYIVHPLWVAIILADLEMDKETIVSGMLHDVVEDTEVGEEDIKREFGEEVALLVD 142
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +LS ++ V+A+ L MFLAMA D R ++IKLADRLHNM TL+ +
Sbjct: 143 GVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLEFMTP 197
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K++ AKET++I+ P+A RLGIS K +L++L K+ P+ +L +++ + E
Sbjct: 198 AKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFFDLVNQINARKTEREEF 257
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V ++++ +K+ +I V GR K +SI+ KM+ + T+D+++D++ +R+IV++ +
Sbjct: 258 VQQIVDEVSTHMKNASIKADV-NGRVKHFFSIYKKMVNQDKTVDQVYDLFAVRIIVDSVK 316
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P E+QIRT+EMH A
Sbjct: 317 DCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQPFEIQIRTQEMHKTA 376
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDR 341
E+G AAHW+YKE + S Q E W R +L WQ + MS +R
Sbjct: 377 EYGIAAHWKYKESNDGKKSVEAQEEEKLSWLRQILEWQRD-MSDNR 421
>gi|282850510|ref|ZP_06259889.1| GTP diphosphokinase [Veillonella parvula ATCC 17745]
gi|282580003|gb|EFB85407.1| GTP diphosphokinase [Veillonella parvula ATCC 17745]
Length = 746
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 205/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A +LA + + + A L+HD ++D S + + FG+ VA LV
Sbjct: 57 FRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 117 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMR 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E
Sbjct: 171 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVRED 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V + +L +AL + +I + GR K YSI+ KM K + +I+D+ +R+IV++
Sbjct: 231 IVNDTMRQLTKALSEAHIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSI 289
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H LW +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 290 PDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 349
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 350 SEYGVAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 385
>gi|227893456|ref|ZP_04011261.1| GTP diphosphokinase [Lactobacillus ultunensis DSM 16047]
gi|227864735|gb|EEJ72156.1| GTP diphosphokinase [Lactobacillus ultunensis DSM 16047]
Length = 749
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 195/318 (61%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + VAAG LHDT++D ++ D + FG VA +V+
Sbjct: 47 RASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVTNDELKEKFGEDVAFIVD 106
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 107 GVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRP 160
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 161 DKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 216
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV
Sbjct: 217 REKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIV 275
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT+ M
Sbjct: 276 KNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEAM 335
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 336 HQVAEYGVAAHWAYKRGN 353
>gi|294792133|ref|ZP_06757281.1| GTP diphosphokinase [Veillonella sp. 6_1_27]
gi|294457363|gb|EFG25725.1| GTP diphosphokinase [Veillonella sp. 6_1_27]
Length = 735
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 205/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A +LA + + + A L+HD ++D S + + FG+ VA LV
Sbjct: 46 FRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLV 105
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 106 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMR 159
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E
Sbjct: 160 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVRED 219
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V + +L +AL + +I + GR K YSI+ KM K + +I+D+ +R+IV++
Sbjct: 220 IVNDTMRQLTKALSEAHIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSI 278
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H LW +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 279 PDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 338
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 339 SEYGVAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 374
>gi|269798272|ref|YP_003312172.1| (p)ppGpp synthetase I SpoT/RelA [Veillonella parvula DSM 2008]
gi|269094901|gb|ACZ24892.1| (p)ppGpp synthetase I, SpoT/RelA [Veillonella parvula DSM 2008]
Length = 746
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 205/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A +LA + + + A L+HD ++D S + + FG+ VA LV
Sbjct: 57 FRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 117 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMR 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E
Sbjct: 171 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVRED 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V + +L +AL + +I + GR K YSI+ KM K + +I+D+ +R+IV++
Sbjct: 231 IVNDTMSQLTKALSEAHIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSI 289
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H LW +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 290 PDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 349
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 350 SEYGVAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 385
>gi|427392523|ref|ZP_18886528.1| RelA/SpoT family protein [Alloiococcus otitis ATCC 51267]
gi|425731484|gb|EKU94302.1| RelA/SpoT family protein [Alloiococcus otitis ATCC 51267]
Length = 736
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 242/456 (53%), Gaps = 55/456 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR S + Y+ H V+ A +LA I + VA G LHD ++D SYD I F VADLV
Sbjct: 43 MRKSQEEYITHPVQVAAILAEIKMDPVTVATGFLHDVIEDTLYSYDDIAEMFNPKVADLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GVSKL + ++E + +A+ M LAMA D R VL+KLADRLHNM TL
Sbjct: 103 DGVSKLGKFKFKSKEEH------QAENHRKMLLAMAKDVRVVLVKLADRLHNMRTLKYHR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K++ A+ETLEI+ PLA+RLGIS K +LE+ +++NP Q+ + + + E
Sbjct: 157 PEKQREIARETLEIYAPLADRLGISRIKWELEDTALRYINPQQYYRIVHLMKSRREDRER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +A E +++++ D +I + GR K +YSI+ KM +K EI+D+ +R+IV +
Sbjct: 217 YIENAQELIQESVDDLDIEANI-TGRPKHIYSIYRKMKNQKKQFGEIYDLLAIRVIVPSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT++MH
Sbjct: 276 KDCYAVLGAIHTRWKPMPGRFKDYIAMPKANMYQSLHTTVLGPDATPLEVQIRTQQMHEV 335
Query: 298 AEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCT 355
AE+G AAHW YKEG Q + + W R ++ Q E+
Sbjct: 336 AEYGVAAHWAYKEGKTQKVKEDSDNKQLSWFRDIIELQTES------------------- 376
Query: 356 FPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLL----ERAGRGSSR 411
++A D S K D V+V + D V E P +S+ +D G S+
Sbjct: 377 --NNASDFMDSIKEDIFQD-KVYVFSPKGD---VMELPKNSSTLDFAYHVHTEVGNKST- 429
Query: 412 WSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
G + ++ P LN+ KLK GD+VE+
Sbjct: 430 ----GAKVNGKIVP-LNY--------KLKNGDIVEM 452
>gi|377560470|ref|ZP_09789973.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia otitidis NBRC 100426]
gi|377522332|dbj|GAB35138.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia otitidis NBRC 100426]
Length = 812
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/345 (42%), Positives = 207/345 (60%), Gaps = 20/345 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FGA VA LV+
Sbjct: 121 RKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYTLEALESEFGAEVAHLVD 180
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 181 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 232
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 233 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 292
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ ++
Sbjct: 293 LARVRADINNALSSAKITATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGMRILCDDVR 351
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT +MH A
Sbjct: 352 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTNDMHRTA 411
Query: 299 EFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHWRYKE G ++ + M W R +L WQ EA
Sbjct: 412 EFGIAAHWRYKESGYRDRKGRKSDAAEIDDMA-WMRQLLDWQREA 455
>gi|237785614|ref|YP_002906319.1| GTP pyrophosphokinase [Corynebacterium kroppenstedtii DSM 44385]
gi|237758526|gb|ACR17776.1| GTP pyrophosphokinase [Corynebacterium kroppenstedtii DSM 44385]
Length = 756
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 211/341 (61%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H + A + A IG ++T + A LLHDT++D + + + FG VA LV
Sbjct: 66 FRKSGEPYITHPLAVATICAEIGMDTTTIVAALLHDTVEDTDYTLEQLEHDFGPEVAHLV 125
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVL-IKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMAD VL IK+ADRLHNM T+ LP
Sbjct: 126 DGVTKLDKVA--------LGSAAEAETIRKMIVAMADDPGVLVIKVADRLHNMRTMRFLP 177
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+ R A++TLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 178 PEKQARKARQTLEVIAPLAHRLGMATVKWELEDLSFAILYPKKYQEIVRLVADRAPKRDE 237
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++L+ LKD +IS V+ GR K +SI+ KM+ + DEI D+ GLR++V++
Sbjct: 238 YIARVSKELQARLKDYHISTEVV-GRPKHYWSIYQKMIVRGRDFDEIFDLVGLRVLVDSV 296
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY AL VH L+ +PG+ KDYI+ P++ Y+SLHT V G PLE+QIRT EMH
Sbjct: 297 QECYAALGAVHTLYQPMPGRFKDYISTPRYGVYESLHTTVIGPDNKPLEIQIRTHEMHYN 356
Query: 298 AEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE G + S+ L + W R +L WQ E+
Sbjct: 357 AEFGIAAHWRYKETKGHNKGSAKELDQMAWMRQLLDWQRES 397
>gi|398333292|ref|ZP_10517997.1| GTP pyrophosphokinase [Leptospira alexanderi serovar Manhao 3 str.
L 60]
Length = 674
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 240/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSASEKNVK-VRWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|377820111|ref|YP_004976482.1| (p)ppGpp synthetase SpoT/RelA [Burkholderia sp. YI23]
gi|357934946|gb|AET88505.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Burkholderia sp. YI23]
Length = 786
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 255/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ I FGA VA+LV+
Sbjct: 89 RQSGEPYITHPVAVAEICAGWKLDAQSIMAALLHDVIEDQGVTKTEIAERFGAKVAELVD 148
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ RE +A+ M LAMA D R +L+KLADRLHNM TL A+P
Sbjct: 149 GLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPP 202
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP+++ L + K +
Sbjct: 203 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPNRYATLEKAVKAARGNRREV 262
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E +++ + D I+ V GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 263 VGKILEAVQRTIADAKINAEV-TGREKTIYSIYKKMRDKQLSFSQVLDVYGFRVVVESAL 321
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E QIRT++MH A
Sbjct: 322 ECYTCIGALHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQIRTRKMHEIA 381
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 382 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 441
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 442 TPKSKIMPLPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 497
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 498 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 547
Query: 465 RMYERGLAVSNTGPAV 480
GLA+S+ P V
Sbjct: 548 -----GLALSDVTPEV 558
>gi|89895197|ref|YP_518684.1| hypothetical protein DSY2451 [Desulfitobacterium hafniense Y51]
gi|219669627|ref|YP_002460062.1| (p)ppGpp synthetase I SpoT/RelA [Desulfitobacterium hafniense
DCB-2]
gi|423073423|ref|ZP_17062162.1| GTP diphosphokinase [Desulfitobacterium hafniense DP7]
gi|89334645|dbj|BAE84240.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539887|gb|ACL21626.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium hafniense
DCB-2]
gi|361855729|gb|EHL07687.1| GTP diphosphokinase [Desulfitobacterium hafniense DP7]
Length = 726
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 11/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y+ H +E A +L + + +AA LHD ++D + + I R FG+ VA LV
Sbjct: 36 LRNSGEEYIQHPLEVAKILLELEMDEATIAAAFLHDVVEDTHYTNEDIEREFGSQVAILV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E ++ + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 96 DGVTKLGRIEYKSKEE------LQVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKFHS 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++ A ETLEIF PLANRLGI K +LE+L F++L P ++ +LS L E
Sbjct: 150 EKKQKEIALETLEIFAPLANRLGIFRIKWELEDLSFRYLKPQEYYDLSEGIALKRAEREV 209
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +L + L + I + GR K YSI+ KM+ + + EI+D+ +R+IV++
Sbjct: 210 QINEVISQLSKRLAEVGIKADI-SGRPKHFYSIYRKMINQHRELSEIYDLTAVRVIVDSV 268
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL ++H +W +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 269 NDCYGALGIIHTMWKPLPGRFKDYIAMPKPNMYQSLHTTLVGAHGEPFEIQIRTWEMHRT 328
Query: 298 AEFGFAAHWRYKEGDCQH-SSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YKEG + Q + W R +L WQ ++
Sbjct: 329 AEYGIAAHWKYKEGAGKPVGGNFEQKLSWLRQMLEWQHDS 368
>gi|206561355|ref|YP_002232120.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia J2315]
gi|444361973|ref|ZP_21162546.1| RelA/SpoT family protein [Burkholderia cenocepacia BC7]
gi|444373868|ref|ZP_21173181.1| RelA/SpoT family protein [Burkholderia cenocepacia K56-2Valvano]
gi|198037397|emb|CAR53332.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia J2315]
gi|443591028|gb|ELT59960.1| RelA/SpoT family protein [Burkholderia cenocepacia K56-2Valvano]
gi|443597844|gb|ELT66253.1| RelA/SpoT family protein [Burkholderia cenocepacia BC7]
Length = 788
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 206/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKNELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YS++ KM K+L+ ++ D+YG R++V++
Sbjct: 264 ISKILEAAQRAMADAKIDAEI-TGREKTIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G S + +W + +L Q EA
Sbjct: 383 EAGVAAHWLYKNGSADLSDVQKRAHQWLKSLLDIQSEA 420
>gi|126434905|ref|YP_001070596.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium sp. JLS]
gi|126234705|gb|ABN98105.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium sp. JLS]
Length = 806
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 206/346 (59%), Gaps = 20/346 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SGDPY+ H + A +LA +G ++T + A LLHDT++D + D + FGA V LV
Sbjct: 114 MRRSGDPYITHPLAVANILAELGMDTTTLIAALLHDTVEDTGYTLDALTAEFGAEVGHLV 173
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 174 DGVTKLDKVA--------LGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 225
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE---LSSKLVECFDE 176
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E L + D
Sbjct: 226 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEIVRLVADRAPSRDT 285
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ E + K K + + GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 286 YLAKVRAEIVNTLTKSKINA--TVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDE 343
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 344 IRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHR 403
Query: 297 QAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 404 TAEYGIAAHWRYKESKGRNGSPAGHTAAEIDDMAWMRQLLDWQREA 449
>gi|453364898|dbj|GAC79531.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia malaquae NBRC 108250]
Length = 738
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 203/344 (59%), Gaps = 17/344 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + + FGA VA LV
Sbjct: 47 FRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLEELEKDFGAEVAHLV 106
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 107 DGVTKLDKVA--------LGSAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 159 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 218
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ L AL +I V GR K +SI+ KM+ + D+IHD+ G+R++ +
Sbjct: 219 YLARVRSDLNNALGGAHIEATV-EGRPKHYWSIYQKMIVRGKDFDDIHDLVGMRVLCDEV 277
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P F YQSLHT V G PLE+QIRT EMH
Sbjct: 278 RDCYAAIGVVHSLWQPMAGRFKDYIAQPSFGVYQSLHTTVIGPEGKPLEIQIRTVEMHRT 337
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
AEFG AAHWRYKEG + E W R +L WQ EA
Sbjct: 338 AEFGIAAHWRYKEGRKGKGRKATDVAEVDDMAWMRQLLDWQREA 381
>gi|373454718|ref|ZP_09546582.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
gi|371935581|gb|EHO63326.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
Length = 800
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 141/336 (41%), Positives = 201/336 (59%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RA+G+PY++H + A +LA + + + A LLHD ++D + + I FG VA LV
Sbjct: 111 VRATGEPYIIHPLAVAYILAELEMDPQGIMAALLHDVVEDTEYTLEDIKMMFGEEVAFLV 170
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLSQ +E+ + + MFLAMA D R V+IKLADRLHNM TL
Sbjct: 171 DGVTKLSQFHYKDKEDQ------QLENFRKMFLAMAKDIRVVVIKLADRLHNMRTLGVFR 224
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+QR AKET+EI+ PLA+RLGI K +LE+LCF +L+P+++ +L ++ + E
Sbjct: 225 REKQQRIAKETIEIYAPLAHRLGIYNIKWELEDLCFHYLHPEEYYDLVRQMKQKRKAREE 284
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V + L +++ I + GR K YSI+ KM + + +I+D+Y +R+IV+
Sbjct: 285 IVNDTMRVLHDHIEEAGIK-ATITGRPKHFYSIYKKMKRDNKDLSQIYDLYAVRVIVDTI 343
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY L + H LW +P + KDYI PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 344 PQCYAVLGIAHSLWKPLPNRFKDYIAVPKPNMYQSLHTTVIGTRGQPVEIQIRTWEMHHI 403
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG S + W R +L WQ
Sbjct: 404 SEYGVAAHWRYKEGKQAGSKDFDAKISWLRRILEWQ 439
>gi|90023337|ref|YP_529164.1| GTP diphosphokinase [Saccharophagus degradans 2-40]
gi|89952937|gb|ABD82952.1| RelA/SpoT family protein [Saccharophagus degradans 2-40]
Length = 702
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 207/337 (61%), Gaps = 12/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +LA++ + + A +LHD ++D + I FG+ VAD+V+
Sbjct: 39 RRSGEPYITHPLAVANILASVHMDHQSLMAAMLHDVIEDTGIGKQAIADQFGSTVADIVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL+++ E T ++ +A M LAMA D R +++KL+DRLHNM TL ALP
Sbjct: 99 GVSKLAKI-----EYETQAEK-QAKNFQKMALAMAQDLRVIVVKLSDRLHNMRTLGALPP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K++R AKETLEI+ P+A+RLG++ W+++ E+ F ++P + + L + L E +A+
Sbjct: 153 EKKRRIAKETLEIYAPIAHRLGMNDWRIEFEDRGFAAMHPLRASRLQASLSEVRGNRKAL 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E L+ +NI LV+ GR K LYSI+ KM K + EI D+Y R+IVE+ +
Sbjct: 213 VEKIQSGIETRLQRENIDGLVI-GREKHLYSIYNKMRSKHKSFKEIMDVYAFRIIVEDID 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY+AL +H L+ PG+ KDYI PK NGYQSLHT+V G VP+EVQIRTKEM +
Sbjct: 272 TCYRALGAIHNLYKPKPGEFKDYIAIPKENGYQSLHTIVIGVRGVPIEVQIRTKEMDELS 331
Query: 299 EFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQ 333
G AAHW YK D HS + W + +L Q
Sbjct: 332 SRGVAAHWLYKSNDVNSVHSGSYDRANRWIKRLLEIQ 368
>gi|408356412|ref|YP_006844943.1| GTP pyrophosphokinase [Amphibacillus xylanus NBRC 15112]
gi|407727183|dbj|BAM47181.1| GTP pyrophosphokinase [Amphibacillus xylanus NBRC 15112]
Length = 729
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 206/340 (60%), Gaps = 12/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H V+ A +LA +G ++ +A G LHD ++D + I F +A LV+
Sbjct: 43 RRSGEPYIIHPVQVASILAKLGLDAETIAGGFLHDVVEDTDKTLKDIEEAFNEEIAMLVD 102
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AM+ D R +LIKLADR+HNM TL LP
Sbjct: 103 GVTKLGKIQYKSQEAQ------QAENHRKMFIAMSKDIRVILIKLADRVHNMRTLKYLPP 156
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++R A ETLEIF PLA+RLGIS K +LE++ ++LNP Q+ + + + + +E
Sbjct: 157 EKQRRIANETLEIFAPLAHRLGISAIKWELEDVALRYLNPQQYYRIVNLMKQKREERENY 216
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + ++++ L+ NI GR K +YSI+ KM+ + DEI+D+ +R+IV + +
Sbjct: 217 IEEVMIEVQKQLEQVNIR-AEFSGRPKHIYSIYRKMMLQNKQFDEIYDLLAVRIIVNSIK 275
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH A
Sbjct: 276 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIGPKGAPLEVQIRTKEMHEIA 335
Query: 299 EFGFAAHWRYKEGDCQH--SSFVLQMVEWARWVLTWQCEA 336
E+G AAHW YKEG + + W R +L Q E
Sbjct: 336 EYGIAAHWAYKEGKSVKPGKGNPEEKLAWFREILESQSET 375
>gi|359423647|ref|ZP_09214774.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amarae NBRC 15530]
gi|358241005|dbj|GAB04356.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amarae NBRC 15530]
Length = 792
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 207/345 (60%), Gaps = 19/345 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FGA VA LV+
Sbjct: 100 RKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLEQLEAEFGAEVAHLVD 159
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 160 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 211
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 212 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDTY 271
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 272 LARVRADITNALAATRIT-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEVR 330
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT EMH A
Sbjct: 331 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTHEMHRTA 390
Query: 299 EFGFAAHWRYKE------GDCQHSSFV-LQMVEWARWVLTWQCEA 336
EFG AAHWRYKE G + S + + W R +L WQ EA
Sbjct: 391 EFGIAAHWRYKESGYKSKGGSRKSDIAEVDDMAWMRQLLDWQREA 435
>gi|404214823|ref|YP_006669018.1| GDP pyrophosphokinase / GTP pyrophosphokinase/
guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
[Gordonia sp. KTR9]
gi|403645622|gb|AFR48862.1| GDP pyrophosphokinase / GTP pyrophosphokinase/
guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
[Gordonia sp. KTR9]
Length = 793
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 202/343 (58%), Gaps = 17/343 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + FG VA LV+
Sbjct: 103 RKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQALEADFGPEVAHLVD 162
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 163 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 214
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 215 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 274
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ E +
Sbjct: 275 LARVRADINNALSGARINATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGMRILCEEDR 333
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F Y SLHT V G PLEVQIRT EMH A
Sbjct: 334 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYMSLHTTVIGPEGKPLEVQIRTHEMHRTA 393
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 336
EFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 394 EFGIAAHWRYKENGYRKSGKKSDTAEIDDMAWMRQLLDWQREA 436
>gi|306490820|gb|ADM94941.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[uncultured candidate division JS1 bacterium]
Length = 724
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 215/340 (63%), Gaps = 15/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG PYL H + A +LA + + + AGLLHD ++D ++ + I + FGA VA LV
Sbjct: 45 RYSGQPYLSHPLGVADILADLNMDIITIVAGLLHDVVEDTQVNLEEIEQVFGAEVAMLVN 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++S +E +A+ MFLA+A D R +LIKLADRL+NM TL +P
Sbjct: 105 GVTKLSKISFKTKEER------QAENFRKMFLAIAEDIRVILIKLADRLNNMRTLKYVPA 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KR + AKETL+I+VP+ANRLG+ K +LE+ +L+P ++ EL+ K+ + A
Sbjct: 159 PKRLKKAKETLDIYVPIANRLGLYRVKWELEDYALLNLDPRKYNELARKVAKS--RAERE 216
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
IE++++ + ++ F + + GR K++YSI+ KM ++ +I+D+ +R+I +
Sbjct: 217 KYIEEVKKRIVEELQKFGIKARIQGRPKNIYSIYKKMEEQDKDFFQIYDLMAIRIICNSI 276
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT-VVTGEGLVPLEVQIRTKEMHL 296
DCY +L ++H LW +PG+ KDYI PK N YQSLHT V+T EG PLEVQIRT+EMH
Sbjct: 277 TDCYASLGLLHSLWKPMPGRFKDYIAMPKSNMYQSLHTTVITSEG-EPLEVQIRTEEMHR 335
Query: 297 QAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE GD S + + W R +L WQ E
Sbjct: 336 TAEYGIAAHWKYKEKGDFLKDSKFEERLTWLRQILDWQKE 375
>gi|255521241|ref|ZP_05388478.1| (p)ppGpp synthetase [Listeria monocytogenes FSL J1-175]
Length = 696
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 210/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + FG+ VA LV
Sbjct: 1 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV 60
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 61 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 114
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 115 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 174
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 175 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 233
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DC L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 234 KDCXAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 293
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 294 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 333
>gi|395204776|ref|ZP_10395716.1| GTP diphosphokinase [Propionibacterium humerusii P08]
gi|422439435|ref|ZP_16516258.1| GTP diphosphokinase [Propionibacterium acnes HL037PA3]
gi|422470924|ref|ZP_16547424.1| GTP diphosphokinase [Propionibacterium acnes HL037PA2]
gi|422574246|ref|ZP_16649800.1| GTP diphosphokinase [Propionibacterium acnes HL044PA1]
gi|313837766|gb|EFS75480.1| GTP diphosphokinase [Propionibacterium acnes HL037PA2]
gi|314927352|gb|EFS91183.1| GTP diphosphokinase [Propionibacterium acnes HL044PA1]
gi|314972703|gb|EFT16800.1| GTP diphosphokinase [Propionibacterium acnes HL037PA3]
gi|328907438|gb|EGG27204.1| GTP diphosphokinase [Propionibacterium humerusii P08]
Length = 773
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 203/339 (59%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG VA LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDEQTLCAGLLHDTVEDTSYTNEQLTADFGEEVALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + + L + I V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVISIVRKDLDEAGIKATVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPDAVSRGIQPDGTDLSWVQSLNQWSK 417
>gi|116328856|ref|YP_798576.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116330538|ref|YP_800256.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116121600|gb|ABJ79643.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124227|gb|ABJ75498.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 674
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 240/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSLSEKNVK-VRWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|409358378|ref|ZP_11236741.1| GTP diphosphokinase [Dietzia alimentaria 72]
Length = 714
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 206/340 (60%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A + A +G ++T + A LLHDT++D S + + FG VA LV+
Sbjct: 27 RKSGDPYITHPLAVATICAEMGMDTTTLVAALLHDTVEDTDYSLEALSGDFGGEVAHLVD 86
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + EA+ + M +AMA D R ++IK+ DRLHNM T+ LP
Sbjct: 87 GVTKLDKVE--------FGEAAEAETIRKMIIAMAHDPRVLVIKVGDRLHNMRTMRFLPP 138
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ + A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 139 EKQVKKARETLEVIAPLAHRLGMATIKWELEDLAFAILEPKKYQEIVRLVADRAPSRDVY 198
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + ++ L+ NI V GR K +SI+ KM+ + DEIHD+ G+R++ E+
Sbjct: 199 LATVTSRVTSELEKANIQARV-EGRPKHYWSIYQKMIVRGREFDEIHDLVGIRVLCEDVR 257
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH W +PG+ KDYI +P+F Y+SLHT V G PLE+QIRT EMH A
Sbjct: 258 DCYAAIGVVHSTWKPMPGRFKDYIAQPRFGVYRSLHTTVIGPDGKPLEIQIRTHEMHRNA 317
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 336
E+G AAHWRYKE +H ++ E W R +L+WQ EA
Sbjct: 318 EYGIAAHWRYKETRGKHHGDPSEVDEMAWMRQLLSWQREA 357
>gi|417001114|ref|ZP_11941028.1| GTP diphosphokinase [Veillonella parvula ACS-068-V-Sch12]
gi|333975597|gb|EGL76476.1| GTP diphosphokinase [Veillonella parvula ACS-068-V-Sch12]
Length = 746
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 205/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG+PY++H + A +LA + + + A L+HD ++D S + + FG+ VA LV
Sbjct: 57 FRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL +
Sbjct: 117 DGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMR 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E
Sbjct: 171 SDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVRED 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V + +L +AL + +I + GR K YSI+ KM K + +I+D+ +R+IV++
Sbjct: 231 IVNDTMSQLTKALSEAHIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSI 289
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L + H LW +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 290 PDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRV 349
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 350 SEYGVAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 385
>gi|359727202|ref|ZP_09265898.1| GTP pyrophosphokinase [Leptospira weilii str. 2006001855]
gi|417779516|ref|ZP_12427301.1| putative GTP diphosphokinase [Leptospira weilii str. 2006001853]
gi|410780345|gb|EKR64939.1| putative GTP diphosphokinase [Leptospira weilii str. 2006001853]
Length = 674
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 240/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSVSEKNVK-VRWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|108799247|ref|YP_639444.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium sp. MCS]
gi|119868363|ref|YP_938315.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium sp. KMS]
gi|108769666|gb|ABG08388.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium sp. MCS]
gi|119694452|gb|ABL91525.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium sp. KMS]
Length = 801
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 206/346 (59%), Gaps = 20/346 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SGDPY+ H + A +LA +G ++T + A LLHDT++D + D + FGA V LV
Sbjct: 109 MRRSGDPYITHPLAVANILAELGMDTTTLIAALLHDTVEDTGYTLDALTAEFGAEVGHLV 168
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 169 DGVTKLDKVA--------LGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 220
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE---LSSKLVECFDE 176
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E L + D
Sbjct: 221 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEIVRLVADRAPSRDT 280
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ E + K K + + GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 281 YLAKVRAEIVNTLTKSKINA--TVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDE 338
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 339 IRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHR 398
Query: 297 QAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 399 TAEYGIAAHWRYKESKGRNGSPAGHTAAEIDDMAWMRQLLDWQREA 444
>gi|116872952|ref|YP_849733.1| GTP pyrophosphokinase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741830|emb|CAK20954.1| GTP pyrophosphokinase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 738
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 210/341 (61%), Gaps = 13/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +L + + + VA+G LHD ++D ++ + F + VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEAFDSEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + + D E
Sbjct: 157 VEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+ + + L + NI + GR K +YSI+ KM ++ +EI+D+ +R++V +
Sbjct: 217 YLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQS+HT V G PLEVQIRT EMH
Sbjct: 276 KDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQI 335
Query: 298 AEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 336 AEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|86158972|ref|YP_465757.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775483|gb|ABC82320.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 746
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 206/345 (59%), Gaps = 27/345 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL+H +E A +LA + + + V GLLHDT++D + I FG +ADLV
Sbjct: 59 IRKSGEPYLVHPLEVAGILAELKLDESSVVTGLLHDTIEDTLATKKEISELFGLEIADLV 118
Query: 61 EGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLD 116
+GV+KLSQ TA+ T E A+ M +AMA D R +L+KLADR HNM TLD
Sbjct: 119 DGVTKLSQF--------TAANTQEEKQAENFRKMVVAMAKDIRVLLVKLADRTHNMRTLD 170
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD 175
A+ ++R A+ETL+I+ PLANRLGI K +LE L FK+L P ++EL+ K+ V +
Sbjct: 171 AMKPESQERIARETLDIYAPLANRLGIQWIKTELEELSFKYLRPADYSELNEKVSVRARE 230
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E V +E + + L + + V GR K +YSI+ KM + + ++I D+ G R+IV
Sbjct: 231 KERFVAEVVEIIRRRLAEAGMKADV-SGRVKHVYSIYRKMRQLDVDFEQIQDVIGFRVIV 289
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+ +CY++L VH LW VPG+ KDYI PK N YQSLHT V G +EVQIRT+EM
Sbjct: 290 DTVAECYESLGFVHSLWKPVPGRFKDYIAIPKPNLYQSLHTTVVGPAGERIEVQIRTREM 349
Query: 295 HLQAEFGFAAHWRYKE------------GDCQHSSFVLQMVEWAR 327
H AE G AAHW YKE D ++ Q+VE+ R
Sbjct: 350 HRIAEEGVAAHWAYKEKGRDGKGAELSRKDAASFGWLRQLVEFQR 394
>gi|418721778|ref|ZP_13280952.1| putative GTP diphosphokinase [Leptospira borgpetersenii str. UI
09149]
gi|421095922|ref|ZP_15556630.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200801926]
gi|410361337|gb|EKP12382.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200801926]
gi|410741822|gb|EKQ90575.1| putative GTP diphosphokinase [Leptospira borgpetersenii str. UI
09149]
gi|456889585|gb|EMG00473.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200701203]
Length = 674
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 240/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSLSEKNVK-VRWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|172059928|ref|YP_001807580.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia ambifaria MC40-6]
gi|171992445|gb|ACB63364.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria MC40-6]
Length = 788
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 255/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++V++
Sbjct: 264 ISKILESAQRAMSDAKIDAEI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 383 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 442
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 443 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 498
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 499 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 548
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 549 -----GLALADVAPEV 559
>gi|257870870|ref|ZP_05650523.1| RelA/SpoT protein [Enterococcus gallinarum EG2]
gi|357051393|ref|ZP_09112586.1| GTP pyrophosphokinase [Enterococcus saccharolyticus 30_1]
gi|257805034|gb|EEV33856.1| RelA/SpoT protein [Enterococcus gallinarum EG2]
gi|355379902|gb|EHG27051.1| GTP pyrophosphokinase [Enterococcus saccharolyticus 30_1]
Length = 736
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + + VA G LHD ++D ++ + FGA VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHDVVEDTEVTLADLKEVFGADVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M +AMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENHRKMLIAMAQDLRVIMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A+ET+EI+ PLA+RLGIS K +LE++ ++LNP Q+ + + +E A
Sbjct: 157 EDKQRRIAQETMEIYAPLAHRLGISRIKWELEDISLRYLNPQQYYRIVHLMQTKREEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V+ +E++ A ++ +I F + GR K +YSI+ KM +K +EI+D+ +R+IV++
Sbjct: 217 YVSETVEQIRLATEELDI-FAEIYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 276 KDCYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGNPVEIQIRTHEMHEI 335
Query: 298 AEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + Q V W R +L Q E+
Sbjct: 336 AEFGVAAHWAYKEGRTEKVKADKMTQQVGWFREILELQDES 376
>gi|418735206|ref|ZP_13291618.1| putative GTP diphosphokinase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410749462|gb|EKR02354.1| putative GTP diphosphokinase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 674
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 240/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSLSEKNVK-VRWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|171315538|ref|ZP_02904774.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria MEX-5]
gi|171099375|gb|EDT44113.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria MEX-5]
Length = 788
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 254/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E ++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 264 IGKILEAAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVESPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 383 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 442
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 443 TPKSRIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 498
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 499 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 548
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 549 -----GLALADVAPEV 559
>gi|410456899|ref|ZP_11310748.1| GTP pyrophosphokinase [Bacillus bataviensis LMG 21833]
gi|409927039|gb|EKN64186.1| GTP pyrophosphokinase [Bacillus bataviensis LMG 21833]
Length = 731
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 203/339 (59%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + VAAG LHD ++D +S I F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILADLEMDPATVAAGFLHDVVEDTNISLKDIEEAFNDEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL + + E +A+ MF+AMA D R +LIKLADRLHNM TL LP+
Sbjct: 104 GVTKLGKFKYKSHEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPV 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +++ + + +I L GR K +YSI+ KM+ + EI+D+ +R++V + +
Sbjct: 218 LEDVIVEVKARMGEVSIK-AELSGRPKHIYSIYRKMVLQNKQFSEIYDLLAVRIVVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTYEMHRIA 336
Query: 299 EFGFAAHWRYKEGDC-QHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHW YKEG SS Q + W R +L +Q +
Sbjct: 337 EFGVAAHWAYKEGKTISDSSTFEQKLTWFREILEFQNDT 375
>gi|359772044|ref|ZP_09275482.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia effusa NBRC 100432]
gi|359310808|dbj|GAB18260.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia effusa NBRC 100432]
Length = 789
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 205/347 (59%), Gaps = 20/347 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++T + A LLHDT++D D + FG VA LV
Sbjct: 95 FRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYGLDELESDFGPEVAHLV 154
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 155 DGVTKLDKVA--------LGSAAEAETIRKMVIAMARDPRVLVIKVADRLHNMRTMRFLP 206
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 207 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKRYEEIVRLVADRAPSRDT 266
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 267 YLARVRADINNALSGSRITATV-EGRPKHYWSIYQKMIVKGREFDDIHDLVGMRILCDEV 325
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 326 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTRDMHRT 385
Query: 298 AEFGFAAHWRYKE--------GDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE G + S + + W R +L WQ EA
Sbjct: 386 AEFGIAAHWRYKESGYKSKGKGAKRAESAEIDDMAWMRQLLDWQREA 432
>gi|328957461|ref|YP_004374847.1| GTP pyrophosphokinase [Carnobacterium sp. 17-4]
gi|328673785|gb|AEB29831.1| GTP pyrophosphokinase (RelA/SpoT) [Carnobacterium sp. 17-4]
Length = 736
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 211/343 (61%), Gaps = 16/343 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + + VA G LHD ++D +++ I R F VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILAELKMDPVTVATGFLHDVVEDTEYTFEDISREFSPEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ M LAMA D R +++KLADRLHN+ TL
Sbjct: 103 DGVTKLGKIKYKSHEEQ------QAENHRKMLLAMAKDLRVIMVKLADRLHNLRTLKFHR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETLE++ PLA+RLGI+ K +LE+ ++LNP Q+ ++SK E
Sbjct: 157 PEKQRRIANETLEVYAPLAHRLGINLIKWELEDTSLRYLNPQQYYRIVHLMNSKREER-- 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E +T +I K+E+++++ NIS + GR K +YSI+ KM +K D+I+D+ +R+IV+
Sbjct: 215 EKYITDSISKIEESVEELNIS-ADITGRPKHIYSIYRKMRDQKKQFDQIYDLLAIRVIVD 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L +H W +PG+ KDYI PK N YQS+HT V GE P+EVQIRTKEMH
Sbjct: 274 SIKDCYAVLGAIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGEFGKPIEVQIRTKEMH 333
Query: 296 LQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG + + + W R ++ Q E+
Sbjct: 334 AVAEYGVAAHWAYKEGITRKVEDDSDGKKISWFRDIIELQDES 376
>gi|172058098|ref|YP_001814558.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sibiricum 255-15]
gi|171990619|gb|ACB61541.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sibiricum 255-15]
Length = 732
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/318 (44%), Positives = 205/318 (64%), Gaps = 10/318 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H V+ A +L IG ++T + A LLHD ++D ++ + + FGA VA LV+
Sbjct: 44 RRSGEPYIIHPVQVAGILVDIGLDATTIVAALLHDVVEDTDITLEELTERFGADVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++ A + MF+AMA D R +LIKLADRLHNM TL +
Sbjct: 104 GVTKLGKIKYKSKREELA------ENHRKMFIAMAEDIRVILIKLADRLHNMRTLQHMVK 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K+ + A+ETLEIF PLA+RLGIST K +LE++ +++NP Q+ + S K EA+
Sbjct: 158 EKQVQKAEETLEIFAPLAHRLGISTIKWELEDISLRYINPQQYYRIVSMMKQKRTEREAL 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
VTS I+++ + L++ I+ V GR K +YSI+ KM K EI+D+ +R+IV++ +
Sbjct: 218 VTSVIDEVNEVLEEVEIAAEV-DGRPKHIYSIYNKMQNSKKEFSEIYDLMAVRIIVDSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H + +PG+ KDYI PK N YQSLHT V G PLEVQIRT++MH A
Sbjct: 277 DCYAVLGIIHTQYKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTRDMHFIA 336
Query: 299 EFGFAAHWRYKEGDCQHS 316
E+G AAHW YKEG Q +
Sbjct: 337 EYGIAAHWAYKEGKEQEA 354
>gi|397679802|ref|YP_006521337.1| GTP pyrophosphokinase [Mycobacterium massiliense str. GO 06]
gi|395458067|gb|AFN63730.1| putative GTP pyrophosphokinase [Mycobacterium massiliense str. GO
06]
Length = 783
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 205/345 (59%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H V A +LA +G ++T + A +LHDT++D S + + FG VA LV
Sbjct: 91 FRKSGDPYITHPVAVANILAELGMDTTTLVAAILHDTVEDTGYSLEQLTAEFGTEVAHLV 150
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 151 DGVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 202
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 203 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 262
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L IS V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 263 YLAKVRAEIVATLNSSRISATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEI 321
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT++MH
Sbjct: 322 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVVGPEGKPLEVQIRTRDMHRT 381
Query: 298 AEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 382 AEYGIAAHWRYKEAKGRNGVPPTHAAAEIDDMAWMRQLLDWQREA 426
>gi|375091649|ref|ZP_09737938.1| RelA/SpoT family protein [Helcococcus kunzii ATCC 51366]
gi|374563171|gb|EHR34493.1| RelA/SpoT family protein [Helcococcus kunzii ATCC 51366]
Length = 719
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/335 (40%), Positives = 208/335 (62%), Gaps = 11/335 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y++H VE +++L+ + + + AGL+HD L+D + + + + FG + LV
Sbjct: 36 VRNSGEEYIVHPVEVSIILSTLELDDETICAGLMHDVLEDTDFTREEMAQEFGDEITALV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL L +E + + + M LAMA D R ++IKLADRLHNM TL+
Sbjct: 96 DGVTKLKNLKYKTKE------ETQIESIRKMVLAMANDIRVIIIKLADRLHNMRTLEYKD 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ A ETLEI+VPLA+RLGI++ K +LE+LC ++++P + ++ ++ + E
Sbjct: 150 RDKQISTANETLEIYVPLAHRLGINSIKWELEDLCLRYIDPISYYSVAQQIDQKRSEREK 209
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ ++KL LK +I F + GR K +YSI+ KM K+ ++D I D+ +R+IV++
Sbjct: 210 IIEKLMQKLSDELKKIDIKF-TMTGRPKGIYSIYNKMKKQDTSIDNIFDLIAIRVIVKDI 268
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY L +VH LW +PG+ KDYI PK N YQSLHT V GE EVQIRT+EMH
Sbjct: 269 NQCYAVLGIVHNLWKPIPGRFKDYIAMPKPNFYQSLHTTVIGEKGQIFEVQIRTEEMHKN 328
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTW 332
AEFG A+HW+YKEG + S+ ++ W R ++ W
Sbjct: 329 AEFGIASHWQYKEGKKKVSNLDNRL-NWIRQLIDW 362
>gi|224823882|ref|ZP_03696991.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudogulbenkiania ferrooxidans
2002]
gi|224604337|gb|EEG10511.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudogulbenkiania ferrooxidans
2002]
Length = 722
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 205/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +L + +AA LLHD L+D ++ + FG +ADLV+
Sbjct: 58 RKSGEPYITHPLAVATMLTEWRLDVQGLAAALLHDVLEDTGVTKPTLVEKFGRTIADLVD 117
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL +L +E T +A+ M LAMA D R +++KLADRLHNM TLDA+
Sbjct: 118 GLSKLERLEYQTKE------TAQAENFRKMVLAMARDIRVIIVKLADRLHNMRTLDAMRE 171
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
KRQR A ETLEI+ P+ANR+G++ +L++L FKHL+P ++ LS + +
Sbjct: 172 DKRQRIALETLEIYAPIANRIGLNKVYRELQDLAFKHLHPHRYHVLSKAVRAARGNRREV 231
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V+ + + Q L + NI + GR K+L+SI+ KM +K L+ E+ DIYG R+IV +
Sbjct: 232 VSKILHSVSQKLVECNIE-ATIKGREKNLFSIYKKMQEKHLSFSEVLDIYGFRVIVNDVP 290
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY AL +H L+ +PGK KDYI PK NGYQSLHT + G P+E+QIRT+EM+ A
Sbjct: 291 SCYLALGALHSLYKPIPGKFKDYIAIPKGNGYQSLHTTLFGPYGTPVEMQIRTREMNSVA 350
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G A+HW YK GD + + +W + +L Q E+
Sbjct: 351 EAGVASHWMYKSGDASLDAAHQRTHQWLQSILDIQAES 388
>gi|170698516|ref|ZP_02889587.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria IOP40-10]
gi|170136600|gb|EDT04857.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria IOP40-10]
Length = 788
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 255/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++V++
Sbjct: 264 ISKILESAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 383 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 442
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 443 TPKSRIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 498
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 499 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 548
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 549 -----GLALADVAPEV 559
>gi|115350915|ref|YP_772754.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia ambifaria AMMD]
gi|115280903|gb|ABI86420.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria AMMD]
Length = 788
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 255/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++V++
Sbjct: 264 ISKILESAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 383 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 442
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 443 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 498
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 499 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 548
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 549 -----GLALADVAPEV 559
>gi|311069245|ref|YP_003974168.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
gi|419820104|ref|ZP_14343718.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
gi|310869762|gb|ADP33237.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
gi|388475754|gb|EIM12463.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
Length = 734
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 207/339 (61%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +A G LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +++++ +++ NIS GR K +YSI+ KM+ + +EI+D+ +R++V + +
Sbjct: 218 VEEVVDEVKNRVEEVNIS-ADFSGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVGSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
E+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 337 EYGVAAHWAYKEGKAANEEATFEKKLSWFREILEFQNES 375
>gi|333919490|ref|YP_004493071.1| GTP diphosphokinase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481711|gb|AEF40271.1| GTP diphosphokinase [Amycolicicoccus subflavus DQS3-9A1]
Length = 730
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 209/341 (61%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG VA LV
Sbjct: 41 VRKSGDPYITHPLAVASILAELGMDTTTLIAALLHDTVEDTGYSLEQLREDFGEEVAHLV 100
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 101 DGVTKLDKV--------VLGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 152
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 153 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKRYEEIVRLVADRAPSRDI 212
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++++ AL ++ V+ GR K +SI+ KM+ K DEIHD+ G+R++ +
Sbjct: 213 YLEKVRKQIDDALSAAKLN-AVVEGRPKHYWSIYQKMIVKGKDFDEIHDLVGIRVLCDEV 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY A+ VVH LW + + KDYI +P++ YQSLHT V G PLEVQIRT EMH
Sbjct: 272 RGCYAAVGVVHSLWQPMAQRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTHEMHRT 331
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 336
AE+G AAHWRYKE +HS+ ++ + W R +L WQ EA
Sbjct: 332 AEYGIAAHWRYKETKGKHSNDATEVDDIAWMRQLLDWQREA 372
>gi|210616270|ref|ZP_03291020.1| hypothetical protein CLONEX_03241 [Clostridium nexile DSM 1787]
gi|210149868|gb|EEA80877.1| hypothetical protein CLONEX_03241 [Clostridium nexile DSM 1787]
Length = 781
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 217/355 (61%), Gaps = 14/355 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+ Y++H + ++LA + + + AG+LHD ++D ++ I FG+ VA LV
Sbjct: 83 FRKSGEAYIIHPLWVGIILADLELDKETIVAGILHDVVEDTVMTEQEITEIFGSEVALLV 142
Query: 61 EGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+KL QLS +A K V+A+ L MFLAMA D R +LIKLADRLHNM TL +
Sbjct: 143 DGVTKLGQLSY------SADKLEVQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQFM 196
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDE 176
K+ A+ET++I+ P+A RLGIS K +L++L K+ P+ +L ++ + E
Sbjct: 197 RPEKQIEKARETMDIYAPIAQRLGISRIKTELDDLSLKYSQPEVFYDLVQQINARKTERE 256
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
V +E++ + +K+ I V GR K +SI+ KM+ + T+D+I+D++ +R+IVE+
Sbjct: 257 EFVQQIVEEVSEHMKNAKIKAEV-KGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIVES 315
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P E+QIRT+EMH
Sbjct: 316 VKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQPFEIQIRTEEMHK 375
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDRSCVGNGD 348
AE+G AAHW+YKE + S Q E W R +L WQ + +++ + GD
Sbjct: 376 TAEYGIAAHWKYKESNDGKKSVAAQEEEKLSWLRQILEWQQDTDNREFLSLLKGD 430
>gi|389815880|ref|ZP_10207128.1| GTP pyrophosphokinase [Planococcus antarcticus DSM 14505]
gi|388465603|gb|EIM07919.1| GTP pyrophosphokinase [Planococcus antarcticus DSM 14505]
Length = 730
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H V+ A +LA + + VAAG LHD ++D +S + I R F VA LV
Sbjct: 43 FRKSGEPYIVHPVQVAGILAELQMDPATVAAGFLHDVVEDTEVSREDIVRDFDEEVAVLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ L++E +A+ MF+AMA D R +LIKLADRLHN+ TL
Sbjct: 103 DGVTKLSKIKYLSKEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNLRTLKYQS 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
+ K++ A ETLEIF P+A+RLGI+T K +LE+ ++LNP Q+ + + K E
Sbjct: 157 VEKQRIKANETLEIFAPIAHRLGINTIKWELEDTALRYLNPQQYYRIVNLMKKKRTEREE 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + ++ L + +I L GR K +YSI+ KM + +EI+D+ +R+ VE+
Sbjct: 217 YLNNVMSEIRTQLDEVDIE-ADLFGRPKHIYSIYRKMAIQNKQFNEIYDLLAVRITVESI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT+EMH
Sbjct: 276 KDCYAVLGIIHSTWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPQGDPLEVQIRTEEMHRI 335
Query: 298 AEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW YKEG + S V + W R +L +Q ++
Sbjct: 336 AEYGVAAHWAYKEGKTIDKPKSSVDSRLSWFREILDFQNDS 376
>gi|169629960|ref|YP_001703609.1| GTP pyrophosphokinase [Mycobacterium abscessus ATCC 19977]
gi|365870761|ref|ZP_09410304.1| GTP pyrophosphokinase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|414581193|ref|ZP_11438333.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-1215]
gi|418420971|ref|ZP_12994149.1| GTP pyrophosphokinase [Mycobacterium abscessus subsp. bolletii BD]
gi|419710109|ref|ZP_14237576.1| GTP pyrophosphokinase [Mycobacterium abscessus M93]
gi|420864283|ref|ZP_15327673.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0303]
gi|420869074|ref|ZP_15332456.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0726-RA]
gi|420873519|ref|ZP_15336896.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0726-RB]
gi|420881241|ref|ZP_15344608.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0304]
gi|420883856|ref|ZP_15347217.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0421]
gi|420890241|ref|ZP_15353589.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0422]
gi|420896623|ref|ZP_15359962.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0708]
gi|420902624|ref|ZP_15365955.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0817]
gi|420907371|ref|ZP_15370689.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-1212]
gi|420910479|ref|ZP_15373791.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-0125-R]
gi|420916932|ref|ZP_15380236.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-0125-S]
gi|420922096|ref|ZP_15385393.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-0728-S]
gi|420927758|ref|ZP_15391040.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-1108]
gi|420967303|ref|ZP_15430508.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0810-R]
gi|420971884|ref|ZP_15435078.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0921]
gi|420978098|ref|ZP_15441276.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-0212]
gi|420983485|ref|ZP_15446652.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-0728-R]
gi|420987780|ref|ZP_15450936.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0206]
gi|421007450|ref|ZP_15470561.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0119-R]
gi|421013448|ref|ZP_15476530.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0122-R]
gi|421018350|ref|ZP_15481409.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0122-S]
gi|421024208|ref|ZP_15487253.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0731]
gi|421029676|ref|ZP_15492709.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0930-R]
gi|421034608|ref|ZP_15497629.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0930-S]
gi|421040060|ref|ZP_15503069.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0116-R]
gi|421043873|ref|ZP_15506874.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0116-S]
gi|421049832|ref|ZP_15512826.1| GTP pyrophosphokinase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|169241927|emb|CAM62955.1| Probable GTP pyrophosphokinase [Mycobacterium abscessus]
gi|363997033|gb|EHM18247.1| GTP pyrophosphokinase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|363998422|gb|EHM19629.1| GTP pyrophosphokinase [Mycobacterium abscessus subsp. bolletii BD]
gi|382941902|gb|EIC66220.1| GTP pyrophosphokinase [Mycobacterium abscessus M93]
gi|392068544|gb|EIT94391.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0726-RA]
gi|392071258|gb|EIT97104.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0303]
gi|392072547|gb|EIT98388.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0726-RB]
gi|392086150|gb|EIU11975.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0304]
gi|392087179|gb|EIU13002.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0421]
gi|392087989|gb|EIU13811.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0422]
gi|392095935|gb|EIU21730.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0708]
gi|392099985|gb|EIU25779.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0817]
gi|392105275|gb|EIU31061.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-1212]
gi|392112473|gb|EIU38242.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-0125-R]
gi|392116345|gb|EIU42113.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-1215]
gi|392121072|gb|EIU46838.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-0125-S]
gi|392131932|gb|EIU57678.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-0728-S]
gi|392134991|gb|EIU60732.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-1108]
gi|392166372|gb|EIU92057.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-0212]
gi|392166996|gb|EIU92678.1| GTP pyrophosphokinase [Mycobacterium abscessus 5S-0921]
gi|392168481|gb|EIU94159.1| GTP pyrophosphokinase [Mycobacterium abscessus 6G-0728-R]
gi|392182059|gb|EIV07710.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0206]
gi|392198903|gb|EIV24513.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0119-R]
gi|392203198|gb|EIV28793.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0122-R]
gi|392210113|gb|EIV35684.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0122-S]
gi|392212223|gb|EIV37786.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0731]
gi|392225152|gb|EIV50671.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0116-R]
gi|392225765|gb|EIV51281.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0930-R]
gi|392227929|gb|EIV53442.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0930-S]
gi|392237725|gb|EIV63219.1| GTP pyrophosphokinase [Mycobacterium abscessus 4S-0116-S]
gi|392238435|gb|EIV63928.1| GTP pyrophosphokinase [Mycobacterium massiliense CCUG 48898]
gi|392252744|gb|EIV78213.1| GTP pyrophosphokinase [Mycobacterium abscessus 3A-0810-R]
Length = 788
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 205/345 (59%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H V A +LA +G ++T + A +LHDT++D S + + FG VA LV
Sbjct: 96 FRKSGDPYITHPVAVANILAELGMDTTTLVAAILHDTVEDTGYSLEQLTAEFGTEVAHLV 155
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 156 DGVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 207
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 208 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 267
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L IS V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 268 YLAKVRAEIVATLNSSRISATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEI 326
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT++MH
Sbjct: 327 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVVGPEGKPLEVQIRTRDMHRT 386
Query: 298 AEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 387 AEYGIAAHWRYKEAKGRNGVPPTHAAAEIDDMAWMRQLLDWQREA 431
>gi|422549838|ref|ZP_16625638.1| GTP diphosphokinase [Propionibacterium acnes HL050PA1]
gi|314918146|gb|EFS81977.1| GTP diphosphokinase [Propionibacterium acnes HL050PA1]
Length = 774
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 203/339 (59%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRPDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|226323920|ref|ZP_03799438.1| hypothetical protein COPCOM_01697 [Coprococcus comes ATCC 27758]
gi|225207469|gb|EEG89823.1| RelA/SpoT family protein [Coprococcus comes ATCC 27758]
Length = 774
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 216/347 (62%), Gaps = 15/347 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + ++LA + + + AG+LHD ++D ++ + I + FG VA LV+
Sbjct: 76 RKSGEEYIIHPLWVGIILAQLEMDKETIVAGILHDVVEDTVMTDEEIRQEFGDEVALLVD 135
Query: 62 GVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL QLS +A K V+A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 136 GVTKLGQLS------YSADKLEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMR 189
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
K+ AKET++I+ P+A RLGIS K +L++L K+ P+ +L ++ + E
Sbjct: 190 PEKQLEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFNDLVKQINARKTEREE 249
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V ++++ +K+ NI V GR K +SI+ KM+ + T+D+I+D++ +R+IV++
Sbjct: 250 FVQQIVDEVSTHMKNANIDAEV-NGRVKHFFSIYKKMVNQDKTVDQIYDLFAVRIIVDSV 308
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL V+H+++ VPG+ KDYI PK N YQSLHT + P E+QIRTKEMH
Sbjct: 309 KDCYAALGVIHEMYTPVPGRFKDYIAMPKANMYQSLHTTLMSSIGQPFEIQIRTKEMHKT 368
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDR 341
AE+G AAHW+YKE + S + E W R +L WQ + MS +R
Sbjct: 369 AEYGIAAHWKYKESEDGKKSVEAKEEEKLSWLRQILEWQRD-MSDNR 414
>gi|418248009|ref|ZP_12874395.1| GTP pyrophosphokinase [Mycobacterium abscessus 47J26]
gi|420931950|ref|ZP_15395225.1| GTP pyrophosphokinase [Mycobacterium massiliense 1S-151-0930]
gi|420938274|ref|ZP_15401543.1| GTP pyrophosphokinase [Mycobacterium massiliense 1S-152-0914]
gi|420942202|ref|ZP_15405459.1| GTP pyrophosphokinase [Mycobacterium massiliense 1S-153-0915]
gi|420948462|ref|ZP_15411712.1| GTP pyrophosphokinase [Mycobacterium massiliense 1S-154-0310]
gi|420952453|ref|ZP_15415697.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-0626]
gi|420956623|ref|ZP_15419860.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-0107]
gi|420962459|ref|ZP_15425684.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-1231]
gi|420992584|ref|ZP_15455731.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-0307]
gi|420998431|ref|ZP_15461568.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-0912-R]
gi|421002870|ref|ZP_15465994.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-0912-S]
gi|353452502|gb|EHC00896.1| GTP pyrophosphokinase [Mycobacterium abscessus 47J26]
gi|392136709|gb|EIU62446.1| GTP pyrophosphokinase [Mycobacterium massiliense 1S-151-0930]
gi|392143789|gb|EIU69514.1| GTP pyrophosphokinase [Mycobacterium massiliense 1S-152-0914]
gi|392149629|gb|EIU75343.1| GTP pyrophosphokinase [Mycobacterium massiliense 1S-153-0915]
gi|392155492|gb|EIU81198.1| GTP pyrophosphokinase [Mycobacterium massiliense 1S-154-0310]
gi|392157765|gb|EIU83462.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-0626]
gi|392185368|gb|EIV11017.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-0307]
gi|392186243|gb|EIV11890.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-0912-R]
gi|392194328|gb|EIV19948.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-0912-S]
gi|392249924|gb|EIV75399.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-1231]
gi|392253522|gb|EIV78990.1| GTP pyrophosphokinase [Mycobacterium massiliense 2B-0107]
Length = 788
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 205/345 (59%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H V A +LA +G ++T + A +LHDT++D S + + FG VA LV
Sbjct: 96 FRKSGDPYITHPVAVANILAELGMDTTTLVAAILHDTVEDTGYSLEQLTAEFGTEVAHLV 155
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 156 DGVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 207
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 208 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 267
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L IS V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 268 YLAKVRAEIVATLNSSRISATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEI 326
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT++MH
Sbjct: 327 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVVGPEGKPLEVQIRTRDMHRT 386
Query: 298 AEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 387 AEYGIAAHWRYKEAKGRNGVPPTHAAAEIDDMAWMRQLLDWQREA 431
>gi|422005240|ref|ZP_16352435.1| GTP pyrophosphokinase [Leptospira santarosai serovar Shermani str.
LT 821]
gi|417256095|gb|EKT85535.1| GTP pyrophosphokinase [Leptospira santarosai serovar Shermani str.
LT 821]
Length = 674
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 241/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPIPGRFKDYIATPKTNLYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|413963295|ref|ZP_11402522.1| (p)ppGpp synthetase SpoT/RelA [Burkholderia sp. SJ98]
gi|413929127|gb|EKS68415.1| (p)ppGpp synthetase SpoT/RelA [Burkholderia sp. SJ98]
Length = 798
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 255/495 (51%), Gaps = 41/495 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ I FGA VA+LV+
Sbjct: 100 RQSGEPYITHPVAVAEICAGWKLDAQSIMAALLHDVIEDQGVTKTEIAERFGAKVAELVD 159
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ RE +A+ M LAMA D R +L+KLADRLHNM TL A+P
Sbjct: 160 GLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPP 213
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP+++ L + K +
Sbjct: 214 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPNRYATLEKAVKAARGNRREV 273
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E +++ + D I+ V GR K++YSI+ KM K+L+ ++ D+YG R++VE
Sbjct: 274 VGKILEAVQRTIADAKINAEV-TGREKTIYSIYKKMRDKQLSFSQVLDVYGFRVVVEGAL 332
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E QIRT++MH A
Sbjct: 333 ECYTCIGALHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQIRTRKMHEIA 392
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 393 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 452
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ T D++E
Sbjct: 453 TPKSKIMPLPRGATALDFAYSIHSDLGNQCVAVKINNELLPLR---TELKSGDIVEVITA 509
Query: 408 GSSRWSP--YGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQR 465
S+ +P GF + R + H +++ + V+L + D+SL Y
Sbjct: 510 PYSKPNPAWLGFVRTGKARSAIRHYL-----KTMRLNESVQLGERLVDQSLKGY------ 558
Query: 466 MYERGLAVSNTGPAV 480
GLA+S+ P V
Sbjct: 559 ----GLALSDVTPEV 569
>gi|403511177|ref|YP_006642815.1| bifunctional (p)ppGpp synthase/hydrolase relA [Nocardiopsis alba
ATCC BAA-2165]
gi|402800241|gb|AFR07651.1| bifunctional (p)ppGpp synthase/hydrolase relA [Nocardiopsis alba
ATCC BAA-2165]
Length = 725
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 206/343 (60%), Gaps = 20/343 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G +AA LLHDT++D S D + FG +A+LV+
Sbjct: 40 RKSGDPYITHPLAVATILAELGMQEATLAAALLHDTVEDTDYSLDELRADFGDEIAELVD 99
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP- 119
GV+KL ++ + +A+ + M +AMA D R ++IKL DRLHNM TL LP
Sbjct: 100 GVTKLDKVKY--------GEATQAETVRKMVVAMARDIRVLVIKLCDRLHNMRTLRYLPK 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEA 177
KR++ A+ETLEIF PLA+RLG++T K +LE+L F L P + E++ + E +
Sbjct: 152 RAKREKKARETLEIFAPLAHRLGMNTIKWELEDLAFATLYPKRFDEIARLVSERAPRRDV 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ IE + L++ + V GR K YSI+ KM+ + DEI+D+ +R++V++
Sbjct: 212 YLQEVIEAVSADLRESKLKATVR-GRPKHYYSIYQKMIARNCGFDEIYDLIAVRVLVDSV 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL +H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT+ MH +
Sbjct: 271 RDCYAALGTIHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPSGNPVELQIRTRAMHRR 330
Query: 298 AEFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE GD + ++W R ++ WQ E
Sbjct: 331 AEYGIAAHWKYKEDRNTGGDAKAKGTT--DMQWLRQLIDWQQE 371
>gi|359685240|ref|ZP_09255241.1| GTP pyrophosphokinase [Leptospira santarosai str. 2000030832]
Length = 674
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 241/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPIPGRFKDYIATPKTNLYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|160893486|ref|ZP_02074271.1| hypothetical protein CLOL250_01037 [Clostridium sp. L2-50]
gi|156864881|gb|EDO58312.1| RelA/SpoT family protein [Clostridium sp. L2-50]
Length = 777
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 212/344 (61%), Gaps = 24/344 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A++LA + + + AG+LHD ++D ++ + I F VA LV
Sbjct: 84 LRKSGEPYIMHPLCVAIILAELELDKETIVAGILHDVVEDTVMTSEEIAAEFSEEVAFLV 143
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL+QL + T V+A+ L MFL+MA D R +LIKLADRLHN+ TL
Sbjct: 144 EGVTKLTQL-----KMTTDKIEVQAENLRKMFLSMAKDIRVILIKLADRLHNLRTLQYQS 198
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K+ A+ET++I+ P+A+RLGIS KV+L++L K+L P+ + +L++++ E
Sbjct: 199 PAKQVEKARETMDIYAPIAHRLGISKIKVELDDLSMKYLMPEVYKDLTAQIDARMHEREA 258
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
+ + +V + ++ A D I GR K L+SI+ KM + T+D+I+DI+ +R+
Sbjct: 259 YIKRIVADVKKHIDNAHLDAEID-----GRVKHLFSIYKKMKNQNKTLDQIYDIFAVRIK 313
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
VE DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT E
Sbjct: 314 VETVRDCYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGPEGQPFEIQIRTFE 373
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 333
MH AE+G AAHW+YKE + V+Q E W R +L WQ
Sbjct: 374 MHRTAEYGIAAHWKYKEN---ITGTVMQKEEEKLSWLRQILEWQ 414
>gi|270307456|ref|YP_003329514.1| relA/spoT protein, GTP pyrophosphokinase [Dehalococcoides sp. VS]
gi|270153348|gb|ACZ61186.1| relA/spoT protein, GTP pyrophosphokinase [Dehalococcoides sp. VS]
Length = 728
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/346 (43%), Positives = 211/346 (60%), Gaps = 22/346 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+P++ H + A+ LA + + + ++A LLHD +DA +S + I + FG VA LV
Sbjct: 37 MRKSGEPFIEHPLNVALTLADLQLDVSTLSAALLHDVPEDANISLEQIDKKFGPDVAKLV 96
Query: 61 EGVSKLSQLS-----KLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 114
+GV+KLS+L+ + AR + +A+ L M +AM+ D R V IKLADR HNM T
Sbjct: 97 DGVTKLSKLALGPAIEDARRPGGNASLRQAENLRKMLVAMSEDLRVVFIKLADRFHNMRT 156
Query: 115 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS----SKL 170
L AL KR+ AKET+EI+ PLA+RLGI K QLE+L F++L+P + +++ SKL
Sbjct: 157 LQALSAEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKL 216
Query: 171 VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK---KKLTMDEIHDI 227
+ + SAI Q+ +KN + L GR K LYSI+ KM K + ++I+D+
Sbjct: 217 AQRKNYIEHVSAIL---QSEFEKNGLKVELSGRPKHLYSIYQKMEKYASQGKQFEDIYDV 273
Query: 228 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEV 287
LR++V + DCY A+ +VH LW +PG DYI PK NGYQSLHT V G PLEV
Sbjct: 274 LALRVLVNDIPDCYHAIGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSLGTTPLEV 333
Query: 288 QIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF------VLQMVEWAR 327
Q+RT +MH AE+G AAHWRYK + +F + Q++EW R
Sbjct: 334 QVRTYQMHHIAEYGVAAHWRYKTAGKEDVNFEDRIGWLRQLIEWHR 379
>gi|374993650|ref|YP_004969149.1| RelA/SpoT family (p)ppGpp synthetase [Desulfosporosinus orientis
DSM 765]
gi|357212016|gb|AET66634.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus orientis
DSM 765]
Length = 739
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 206/350 (58%), Gaps = 21/350 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y+LH +E A +L + + +AA LLHD ++D + I + FG +A LV
Sbjct: 37 LRNSGEDYILHPLEVAQILVELEMDEATIAAALLHDVVEDTEYTIADIEKNFGEEIALLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ + + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 97 DGVTKLGRIEYKSKVEQ------QVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHS 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++ A+ETLEIF PLANRLGI K +LE+L F++L P+++ +L L EA
Sbjct: 151 PAKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLKPEEYYDLVEGIALKRREREA 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++ + L + I + + GR K YSI+ KM + + EI+D+ +R+IV++
Sbjct: 211 YINEVIVQMREKLDEVQI-YADIAGRPKHFYSIYRKMTTQNKELSEIYDLMAIRVIVDSV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL ++H +W +PG+ KDYI PK N YQSLHT + GE P E+QIRT EMH
Sbjct: 270 NDCYGALGIIHTMWKPIPGRFKDYIAMPKPNMYQSLHTTLIGENGEPFEIQIRTCEMHRT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSF-----------VLQMVEWARWVLTWQCEA 336
+E+G AAHW+YKEG + S Q + W R +L WQ ++
Sbjct: 330 SEYGIAAHWKYKEGSGKECSTNTTSNKTASVNFEQKLSWLRQLLEWQHDS 379
>gi|427405631|ref|ZP_18895836.1| RelA/SpoT family protein [Selenomonas sp. F0473]
gi|425708472|gb|EKU71511.1| RelA/SpoT family protein [Selenomonas sp. F0473]
Length = 742
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 208/342 (60%), Gaps = 19/342 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + A +L + + + A LLHD ++D + + + FG +A L++
Sbjct: 46 RISGEAYIIHPLNVAYILTGLHMDDETICAALLHDVVEDTHATIEEMEELFGKNIAALID 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 106 GVTKLGRIQYMSKED------VQLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMRE 159
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
KRQR A ETLE++ PLANRLGIS K++LE+LC ++L P+ + L ++ E
Sbjct: 160 DKRQRIAHETLEVYAPLANRLGISNIKIELEDLCLRYLEPEAYYTLVEEVKHKRQERQEF 219
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +I ++++ L+D I + GR K YSI+ KM + +++EI+D+ +R++V + +
Sbjct: 220 ILDSIRQIKEKLEDAGIEAEI-KGRAKHFYSIYRKMKRDNKSVNEIYDLSAVRVLVSSVK 278
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G PLE+QIRT MH +
Sbjct: 279 DCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHG-DPLEIQIRTHAMHRIS 337
Query: 299 EFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCE 335
EFG AAHW+YKE G S Q + W R +++ Q E
Sbjct: 338 EFGVAAHWKYKEAGKSTGATDESD---QKMSWLRQMVSLQKE 376
>gi|410584315|ref|ZP_11321418.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
DSM 13965]
gi|410504250|gb|EKP93761.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
DSM 13965]
Length = 732
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 205/335 (61%), Gaps = 11/335 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG ++ H + A++LA + ++ + A LLHDT++D ++ + + R FG+ VA LV+
Sbjct: 46 RASGQDFIEHPLAVALILADLELDAATLVAALLHDTVEDTEVTLEQVEREFGSEVALLVD 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+Q+ R +A+ L MFLAMA D R VLIKLADRLHNM TL +P
Sbjct: 106 GVTKLNQIEWRTRLEE------QAENLRKMFLAMARDIRVVLIKLADRLHNMRTLAVVPR 159
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K+ ++ETLEIF PLA+RLG+S + +LE+L ++L P+++ ELS ++ E +
Sbjct: 160 EKQIAKSRETLEIFAPLAHRLGMSQIQWELEDLALRYLEPERYRELSERIPRKRAEREEL 219
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
I L L + I + GR K YSI+ KM ++ + +I+D+ +R+IV+ +
Sbjct: 220 AQVIIRTLRAKLAEAGIRADI-QGRAKHFYSIYRKMYEQGKDLSQIYDLIAVRVIVDTVK 278
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VVH +W +PG+ KDYI PK N YQSLHT V G P E+QIRT +MH A
Sbjct: 279 DCYGALGVVHTIWRPLPGRFKDYIATPKSNMYQSLHTTVIGPQGEPFEIQIRTWDMHRTA 338
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHWRYKE F ++ W R VL WQ
Sbjct: 339 EYGIAAHWRYKERGRTDKDFDAKLA-WLRQVLEWQ 372
>gi|410449683|ref|ZP_11303736.1| putative GTP diphosphokinase [Leptospira sp. Fiocruz LV3954]
gi|418743759|ref|ZP_13300118.1| putative GTP diphosphokinase [Leptospira santarosai str. CBC379]
gi|418751581|ref|ZP_13307865.1| putative GTP diphosphokinase [Leptospira santarosai str. MOR084]
gi|409968054|gb|EKO35867.1| putative GTP diphosphokinase [Leptospira santarosai str. MOR084]
gi|410016440|gb|EKO78519.1| putative GTP diphosphokinase [Leptospira sp. Fiocruz LV3954]
gi|410795154|gb|EKR93051.1| putative GTP diphosphokinase [Leptospira santarosai str. CBC379]
gi|456874475|gb|EMF89768.1| putative GTP diphosphokinase [Leptospira santarosai str. ST188]
Length = 674
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 241/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPIPGRFKDYIATPKTNLYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|302874945|ref|YP_003843578.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium cellulovorans 743B]
gi|307690437|ref|ZP_07632883.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulovorans 743B]
gi|302577802|gb|ADL51814.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulovorans 743B]
Length = 724
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/337 (40%), Positives = 202/337 (59%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y +H VE A +L +G ++ + AGLLHD ++D +Y+ + R F VADLV+
Sbjct: 37 RLSGEAYFIHPVEVAKILTEMGMDTATIVAGLLHDVVEDTDFTYEDMVREFTKEVADLVD 96
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +E +AD + M LAM D R +LIKLADRLHNM T+
Sbjct: 97 GVTKLDKIHYRTKEE------AQADNIRKMLLAMTKDIRVILIKLADRLHNMRTIKFQSP 150
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K++ AKET++I+ PLA+RLGI K +LE+LC ++L+ ++ +L K+ E
Sbjct: 151 DKQKEIAKETMDIYAPLAHRLGIFKIKWELEDLCLRYLHSTEYYDLVQKIASKRTEREND 210
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I++L L NI + GR K YSI+ KM+ K ++D+I D+ +R++V+ +
Sbjct: 211 IREIIDELINNLGASNIH-ADIDGRPKHFYSIYKKMVNKNKSLDQIFDLMAVRILVKTIK 269
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH ++ +PG+ KDYI PK N YQSLHT V + P E+QIRT +MH A
Sbjct: 270 DCYATLGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHTTVFAKNGKPFEIQIRTFDMHKTA 329
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
EFG AAHW+YKEG + + W R V+ +Q E
Sbjct: 330 EFGIAAHWKYKEGGSSNDKDFDNKLGWIRDVIEYQTE 366
>gi|421111743|ref|ZP_15572216.1| putative GTP diphosphokinase [Leptospira santarosai str. JET]
gi|410802939|gb|EKS09084.1| putative GTP diphosphokinase [Leptospira santarosai str. JET]
Length = 674
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 241/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPIPGRFKDYIATPKTNLYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V+W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ ELR + + D R K
Sbjct: 427 KGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|347753839|ref|YP_004861403.1| (p)ppGpp synthetase RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
gi|347586357|gb|AEP10887.1| (p)ppGpp synthetase, RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
Length = 731
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 214/338 (63%), Gaps = 15/338 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL+H + A +LA + + V GLLHD ++D ++ + + + FG +A LV
Sbjct: 38 VRKSGEPYLMHPLAVAYILAEMRLDVICVTTGLLHDVVEDTHVTLEELEQQFGPEIAHLV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALP 119
+G++K+S + +RE+ +A+ + M LAM D R VL+KLADRLHNM TLD LP
Sbjct: 98 DGLTKISNIEYTSREDR------QAETVRKMLLAMVDDIRVVLVKLADRLHNMRTLDYLP 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
KR A+ETL+I+ P+A+RLG+ + +LE+L F++L PD + L S L + EA
Sbjct: 152 PEKRAAKAQETLDIYAPIAHRLGMGKIRGELEDLSFQYLYPDDYQHLKSILDQRRPALEA 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ L++ L + N+ + + GR K LYS++ K+ ++ +++D+++D+ +R+I ++
Sbjct: 212 DLAHVRATLQEKLPEHNVKVVEIQGRIKRLYSLYRKLKERAISIDQVYDLMAVRVITQDI 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH +W +PG+ KD+I P+ N YQSLHT V G+ P EVQIRT EMH
Sbjct: 272 ADCYAAVGVVHNIWKPIPGRFKDWIGIPRNNLYQSLHTSVVGDIGHPFEVQIRTAEMHKI 331
Query: 298 AEFGFAAHWRYKEG------DCQHSSFVLQMVEWARWV 329
AE G AAHWRYKEG D + +++ ++VEW + V
Sbjct: 332 AEEGIAAHWRYKEGRSAVKEDPETYAWLKRLVEWQQEV 369
>gi|325290218|ref|YP_004266399.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophobotulus glycolicus DSM
8271]
gi|324965619|gb|ADY56398.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophobotulus glycolicus DSM
8271]
Length = 718
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/343 (42%), Positives = 203/343 (59%), Gaps = 13/343 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y+ H +E A++LA + + + + A LHD +D + I + FG V LV
Sbjct: 37 LRVSGEDYIQHPLEVALILAELEMDDSTIIAAFLHDVAEDTERKLEDIRKVFGEEVEGLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +L + V+ + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 97 DGVTKLGKLE------YKSKMEVQVENLRKMFLAMAKDIRVILIKLADRLHNMRTLRFKT 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++ A+ET+EI+ PLANRLGI K +LE+L F++L+P ++ +L L E
Sbjct: 151 EQKQKEIAQETIEIYAPLANRLGIFRIKWELEDLSFRYLHPQEYYDLVEGIALKRKEREE 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ IE L+ L + I + GR K YSI+ KM+ + + EI+D+ +R+IVE
Sbjct: 211 QINKVIEHLKARLGEVGIEADI-AGRPKHFYSIYKKMITQNKDLSEIYDLTAIRVIVETV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL V+H LW +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 270 NDCYGALGVIHTLWKPIPGRFKDYIAMPKPNMYQSLHTTLIGTLGEPFEIQIRTWEMHRT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
AE+G AAHW+YKEG S+ Q + W R +L WQ + SKD
Sbjct: 330 AEYGIAAHWKYKEGKKVESNLE-QKLSWLRQLLEWQHD--SKD 369
>gi|292670701|ref|ZP_06604127.1| GTP diphosphokinase [Selenomonas noxia ATCC 43541]
gi|292647647|gb|EFF65619.1| GTP diphosphokinase [Selenomonas noxia ATCC 43541]
Length = 746
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 210/340 (61%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGD Y++H + A +L + + V A LLHD ++D + + + FG + L+
Sbjct: 48 VRISGDAYIMHPLNVAYILTGLHLDDETVCAALLHDVVEDTHATLEEMEAEFGRNIMALI 107
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 108 DGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMR 161
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
KR+R AKET+E++ PLANRLGIS+ KV+LE+LC ++L P+ + L ++ E
Sbjct: 162 EDKRRRIAKETIEVYAPLANRLGISSIKVELEDLCLRYLEPEAYYALVEEVKHKRQERQE 221
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +I+K+ + L+ +I + GR K YSI+ KM + +++EI+D+ +R++V +
Sbjct: 222 FILDSIQKIHEKLEAADIKAEI-KGRAKHFYSIYRKMKRDNKSVNEIYDLSAVRILVSSV 280
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G PLE+QIRT+ MH
Sbjct: 281 KDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRGY-PLEIQIRTEAMHRI 339
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 335
+EFG AAHW+YKE + Q + W R +++ Q E
Sbjct: 340 SEFGVAAHWKYKEAGRSIGVTDENDQKMSWLRQMVSLQKE 379
>gi|317128220|ref|YP_004094502.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus cellulosilyticus DSM
2522]
gi|315473168|gb|ADU29771.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus cellulosilyticus DSM
2522]
Length = 726
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 202/340 (59%), Gaps = 11/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H V+ A +L +G + +AA LHD ++D + + + FG VA LV
Sbjct: 37 FRKSGEPYIWHPVQVAGILVDLGMDPKTIAAAFLHDVVEDTDVKLEDLANRFGNEVAMLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 97 DGVTKLGKIKYKSKEEQ------QAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLP 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 151 PEKQRRIANETLEIFAPLAHRLGISKIKWELEDTSLRYLNPQQYYRIVNLMKKKRAERED 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ K+ + L+ + + GR K +YSI+ KM + +EI+D+ +R+IV +
Sbjct: 211 YIDEVQNKIRERLEGVGVQAGI-HGRAKHIYSIYRKMALQNKQFNEIYDLLAVRIIVNSI 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIR+++MH
Sbjct: 270 KDCYAVLGIIHTQWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGDPLEVQIRSEDMHKV 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQCEA 336
AEFG AAHW YKEG + L+ + W R +L WQ +
Sbjct: 330 AEFGVAAHWAYKEGKTMKQNETLETKMSWFREILEWQNDT 369
>gi|89100794|ref|ZP_01173647.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
gi|89084497|gb|EAR63645.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
Length = 731
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 210/342 (61%), Gaps = 13/342 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + + VAAG LHD ++D ++ I F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHDVVEDTEVTLADISEAFNPEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPA 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I +++ + + +I L GR K +YSI+ KM + +EI+D+ +R++V + +
Sbjct: 218 LEEVIGEMKGKMDEVSIR-ADLSGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIVVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGDPLEVQIRTTEMHQIA 336
Query: 299 EFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEAMS 338
EFG AAHW YKEG + SSF ++ W R +L +Q ++++
Sbjct: 337 EFGIAAHWAYKEGKTVNEGSSFEEKLT-WFREILEFQDDSVN 377
>gi|320334134|ref|YP_004170845.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus maricopensis DSM
21211]
gi|319755423|gb|ADV67180.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus maricopensis DSM
21211]
Length = 748
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 208/339 (61%), Gaps = 31/339 (9%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A++LA +G ++ + AG LHDT++D +++ I FG V +V
Sbjct: 34 LRKSGEPYITHPVAVALILAELGMDTDAICAGFLHDTVEDTDVTFQQIEDHFGRDVRRIV 93
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALP 119
EG +K+S+L+K T+ + +++ L M +AM D R +++KLADRLHNM TL ++
Sbjct: 94 EGETKVSKLTK----QTTSLQDQQSENLRQMLIAMTDDIRIIVVKLADRLHNMRTLGSMR 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+QR ++ET+EI+ PLA+RLGI K +LE+L FK+L P+ + +L+ +L D EA
Sbjct: 150 PDKQQRISRETIEIYAPLAHRLGIGQIKWELEDLSFKYLEPEAYADLARRLRTRQDQREA 209
Query: 178 MVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
V A+++L +AL + + I + + GR K LYSIH KM K+ +++I D+ +R+
Sbjct: 210 HVKLALQQLREALTEDLELPEWIDNIDIAGRSKHLYSIHTKMRKEGKALEQIFDLLAIRV 269
Query: 233 I-------------------VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSL 273
I V + CY +L +VH +W +PG+ KDYI PK NGYQSL
Sbjct: 270 ILTPKPVNAPEGKQKDRAEEVREKRVCYHSLGIVHSMWTPIPGRFKDYIAVPKPNGYQSL 329
Query: 274 HTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 312
HT V P+EVQIR++ MH AE+G AAHW YK+GD
Sbjct: 330 HTTVISTEGQPIEVQIRSRRMHEVAEYGVAAHWMYKQGD 368
>gi|347541215|ref|YP_004848641.1| (p)ppGpp synthetase I SpoT/RelA [Pseudogulbenkiania sp. NH8B]
gi|345644394|dbj|BAK78227.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudogulbenkiania sp. NH8B]
Length = 718
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 205/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +L + +AA LLHD L+D ++ + FG +ADLV+
Sbjct: 54 RKSGEPYITHPLAVATMLTEWRLDVQGLAAALLHDVLEDTGVTKPTLVEKFGRTIADLVD 113
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL +L +E T +A+ M LAMA D R +++KLADRLHNM TLDA+
Sbjct: 114 GLSKLERLEYQTKE------TAQAENFRKMVLAMARDIRVIIVKLADRLHNMRTLDAMRE 167
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
KRQR A ETLEI+ P+ANR+G++ +L++L FKHL+P ++ LS + +
Sbjct: 168 DKRQRIALETLEIYAPIANRIGLNKVYRELQDLAFKHLHPHRYHVLSKAVRAARGNRREV 227
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V+ + + Q L + NI + GR K+L+SI+ KM +K L+ E+ DIYG R+IV +
Sbjct: 228 VSKILHSVSQKLVECNIE-ATIKGREKNLFSIYKKMQEKHLSFSEVLDIYGFRVIVNDVP 286
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY AL +H L+ +PGK KDYI PK NGYQSLHT + G P+E+QIRT+EM+ A
Sbjct: 287 SCYLALGALHSLYKPIPGKFKDYIAIPKGNGYQSLHTTLFGPYGTPVEMQIRTREMNSVA 346
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G A+HW YK GD + + +W + +L Q E+
Sbjct: 347 EAGVASHWMYKSGDASLDAAHQRTHQWLQSILDIQAES 384
>gi|256823641|ref|YP_003147604.1| (p)ppGpp synthetase I SpoT/RelA [Kangiella koreensis DSM 16069]
gi|256797180|gb|ACV27836.1| (p)ppGpp synthetase I, SpoT/RelA [Kangiella koreensis DSM 16069]
Length = 705
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/339 (44%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR+SGDPY+ H V A +LA + + + A L+HD ++D +S + FG VADLV
Sbjct: 41 MRSSGDPYITHPVAAAHILADLHLDHQTIMAALMHDVIEDCDVSKQDLSGEFGETVADLV 100
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGVSKL+Q+ ++E +A+ M +AM D R +LIKLADRLHNM TL AL
Sbjct: 101 EGVSKLTQIDFQSKEQ------AQAENFRKMMMAMTQDIRVILIKLADRLHNMQTLGALR 154
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEA 177
KR+R A+ETLEI+ P+ANRLGI K QLE L F ++ P ++ L S K V +
Sbjct: 155 PDKRRRIARETLEIYAPIANRLGIYRLKEQLELLGFANMYPLRYRVLQHSVKKVRGHRKE 214
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V E+L LKD I+ V+ GR KS+YSI+ KM K T E+ DIY R+I ++E
Sbjct: 215 IVERITEQLRTRLKDSRITSKVI-GREKSVYSIYKKMRDKVGTFTEVMDIYAFRVITDSE 273
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+ L +H L+ +PG+ KDYI PK NGYQSLHTV+ + + +EVQIRT++M
Sbjct: 274 DSCYRILGQIHNLFKPIPGRFKDYIAIPKANGYQSLHTVLRNKTGMHIEVQIRTEQMDQM 333
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE G AAHW YK G + + EW + ++ Q A
Sbjct: 334 AENGVAAHWLYKTGSAHPAE--TKAREWLQSLVELQQSA 370
>gi|389850518|ref|YP_006352753.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 258]
gi|388247824|gb|AFK16815.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 258]
Length = 763
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 213/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 74 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLEDLTRDFGEEVARLV 133
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ L
Sbjct: 134 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLS 185
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 186 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEVVRLVADRAPSRDR 245
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +L+QALK+ +I V+ GR K +SI+ KM+ + ++I D+ G+R++V++
Sbjct: 246 YLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDIFDLVGIRILVDSI 304
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ PLEVQ+RT EMH
Sbjct: 305 NNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKPLEVQVRTHEMHFN 364
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 365 AEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 405
>gi|354558097|ref|ZP_08977353.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium
metallireducens DSM 15288]
gi|353548822|gb|EHC18266.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium
metallireducens DSM 15288]
Length = 726
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 204/343 (59%), Gaps = 12/343 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y+ H +E A +L + + +AA LLHD ++D + + I + FG VA +V
Sbjct: 36 LRNSGEDYIQHPLEVAKILLELEMDEATIAAALLHDVVEDTPYTIEDIEKEFGPQVALMV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + + + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 96 DGVTKLGRIPYKTKVEQ------QVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHS 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
K++ A+ET+EIF PLANRLGI K +LE+L F++L P ++ +LS + E
Sbjct: 150 HEKQKEIAQETIEIFAPLANRLGIFRIKWELEDLSFRYLKPQEYYDLSEGIAFKRRERED 209
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ IE+L L + I + GR K YSI+ KM+ + + EI+D+ +R+IV++
Sbjct: 210 QINEVIEQLRHRLGEVGIHAEI-AGRPKHFYSIYRKMVTQNKELSEIYDLTAVRVIVDSV 268
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL ++H +W +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 269 NDCYGALGIIHTMWKPLPGRFKDYIAMPKPNMYQSLHTTLVGAHGEPFEIQIRTWEMHRT 328
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
AE+G AAHW+YKEG S Q + W R +L WQ + SKD
Sbjct: 329 AEYGIAAHWKYKEGSKSISGSFDQKLSWIRQLLEWQHD--SKD 369
>gi|256826847|ref|YP_003150806.1| (p)ppGpp synthetase, RelA/SpoT family [Cryptobacterium curtum DSM
15641]
gi|256582990|gb|ACU94124.1| (p)ppGpp synthetase, RelA/SpoT family [Cryptobacterium curtum DSM
15641]
Length = 856
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 206/337 (61%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++ H VE A++L+ + ++ +AA LLHD ++D + + + FG VADLV+
Sbjct: 151 RKSGEPFVSHPVEVALILSDLRMDAETLAAALLHDVVEDTDTTKEELAHEFGEAVADLVD 210
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVLIKLADRLHNMMTLDALPL 120
GV+K++ ++ EN + +A + MF+AM D R ++IKLADRLHNM TL AL
Sbjct: 211 GVTKIT---RIEVENLSDE---QAATIRKMFVAMNKDIRVIVIKLADRLHNMRTLSALRE 264
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 178
+R + ETLEI+ P+A+RLGI K +LE+L F +L P + ++S + E E
Sbjct: 265 DRRIFKSHETLEIYAPIAHRLGIGQIKWELEDLAFFYLEPGKFKQISRMVAESRMEREEY 324
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + I+ L ++ +I ++ GR K LYSI+ KM EI+D+ +R+IV+
Sbjct: 325 LGNVIDILHGEMEKADIGCQIM-GRPKHLYSIYRKMTTHGKGFSEIYDLIAVRIIVDTVA 383
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY AL VH LW +PG+ KDYI PK+N YQSLHT V G PLEVQIRT+EMH +
Sbjct: 384 QCYSALGAVHSLWHPMPGRFKDYIAMPKYNMYQSLHTTVIGPAGRPLEVQIRTEEMHRMS 443
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEG S F Q+ W R ++ WQ E
Sbjct: 444 EYGVAAHWRYKEGAKGESGFDRQLA-WLRQMMDWQDE 479
>gi|325912114|ref|ZP_08174512.1| GTP diphosphokinase [Lactobacillus iners UPII 143-D]
gi|325476064|gb|EGC79232.1| GTP diphosphokinase [Lactobacillus iners UPII 143-D]
Length = 750
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/316 (45%), Positives = 197/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA++G + VAAG LHDT++D ++ + I + FG VA +V
Sbjct: 43 FRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVTNEDIKKEFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 EGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSE--R 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E ++SAI L+ L D I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 ERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHKEFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++MH
Sbjct: 276 TVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGYQSLHTTIIGPGGKPLEIQIRTEKMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QIAEYGVAAHWAYKEG 351
>gi|302335523|ref|YP_003800730.1| (p)ppGpp synthetase I SpoT/RelA [Olsenella uli DSM 7084]
gi|301319363|gb|ADK67850.1| (p)ppGpp synthetase I, SpoT/RelA [Olsenella uli DSM 7084]
Length = 781
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 206/344 (59%), Gaps = 16/344 (4%)
Query: 2 RASGDPYLLHCVETAMLLAA-IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H VE A++LA + + + A LLHDT++D + D + FGA VA+LV
Sbjct: 57 RRSGEPYINHPVEVALILAKDLKMDEDPICAALLHDTVEDTSATLDDLTERFGATVAELV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+ + + + +A L MFLAM+ D R V+IKLADRLHNM TL ALP
Sbjct: 117 DGVTKLTSIEVSSMDEK------QALNLRKMFLAMSKDIRVVIIKLADRLHNMRTLAALP 170
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
+R A+ET++++ PLA+RLGIS+ K +LE+L F +LNPD++ ++ + E E
Sbjct: 171 PDRRVFKARETMDVYAPLADRLGISSIKWELEDLAFFYLNPDEYERIARMVQESRAQREQ 230
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
AI+ L L I+ + GR K L+SI+ KM +K +I+D+ +R++ E+
Sbjct: 231 NTDEAIKTLGDELARVGITGFQIHGRPKHLWSIYQKMTRKGKKFTDIYDLIAIRVLTESV 290
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L VH +W +PG+ KDYI PK NGYQSLHT V G P+E+QIRT EMH Q
Sbjct: 291 GDCYSTLGAVHTVWHPLPGRFKDYIAMPKPNGYQSLHTTVIGFDARPIEIQIRTFEMHSQ 350
Query: 298 AEFGFAAHWRYKEGD------CQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW YK+ + + V + W R L W +
Sbjct: 351 AEYGIAAHWLYKKSGNSSGRMSRDEADVDSQINWIRRSLDWATD 394
>gi|269795064|ref|YP_003314519.1| (p)ppGpp synthetase, RelA/SpoT family [Sanguibacter keddieii DSM
10542]
gi|269097249|gb|ACZ21685.1| (p)ppGpp synthetase, RelA/SpoT family [Sanguibacter keddieii DSM
10542]
Length = 775
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 200/338 (59%), Gaps = 12/338 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SGDPY+ H V + +LA +G +AA LLHDT++D S D + R +G +A LV
Sbjct: 82 MRKSGDPYITHPVAVSTILAELGMTPPTLAAALLHDTVEDTDYSLDQLRRDYGDEIAMLV 141
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ T +A+ + M +AMA D R ++IKLADRLHN T +P
Sbjct: 142 DGVTKLDKV--------TYGDAAQAETVRKMVVAMARDIRVLVIKLADRLHNARTWKFVP 193
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
QR A+ET+EI+ PLA+RLG++T K +LE+L F+ L P + E+ + E E
Sbjct: 194 SSSAQRKARETIEIYAPLAHRLGMNTIKWELEDLSFQTLYPKVYDEIVHLVSERAPAREE 253
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ E++ L+ I V GR K YSI+ KM+ + +I+D+ G R++V++
Sbjct: 254 YLALVREQITADLRTSKIKATV-TGRPKHYYSIYQKMIVRGHDFADIYDLVGTRVLVDSV 312
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L +H W VPG+ KDYI PKFN YQSLHT V G G P+E+QIRT EMH +
Sbjct: 313 RDCYATLGALHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPGGKPVEIQIRTHEMHRR 372
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE + ++W R ++ WQ E
Sbjct: 373 AEYGVAAHWKYKEAAKDGADAAGNDMQWLRQLVDWQRE 410
>gi|398311619|ref|ZP_10515093.1| GTP pyrophosphokinase RelA/SpoT [Bacillus mojavensis RO-H-1]
Length = 734
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +A G LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++++ +++ NI GR K +YSI+ KM+ + +EI+D+ +R++V + +
Sbjct: 218 VDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
E+G AAHW YKEG S + + W R +L +Q E+
Sbjct: 337 EYGVAAHWAYKEGKAASESATFEKKLSWFREILEFQNES 375
>gi|349611483|ref|ZP_08890718.1| hypothetical protein HMPREF1027_00145 [Lactobacillus sp. 7_1_47FAA]
gi|348608576|gb|EGY58556.1| hypothetical protein HMPREF1027_00145 [Lactobacillus sp. 7_1_47FAA]
Length = 750
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/316 (45%), Positives = 197/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA++G + VAAG LHDT++D ++ + I + FG VA +V
Sbjct: 43 FRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVTNEDIKKEFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 EGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSE--R 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E ++SAI L+ L D I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 ERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHKEFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++MH
Sbjct: 276 TVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGYQSLHTTIIGPGGKPLEIQIRTEKMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QIAEYGVAAHWAYKEG 351
>gi|325912633|ref|ZP_08175016.1| GTP diphosphokinase [Lactobacillus iners UPII 60-B]
gi|325478054|gb|EGC81183.1| GTP diphosphokinase [Lactobacillus iners UPII 60-B]
Length = 750
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/316 (45%), Positives = 197/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA++G + VAAG LHDT++D ++ + I + FG VA +V
Sbjct: 43 FRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVTNEDIKKEFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 EGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSE--R 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E ++SAI L+ L D I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 ERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHKEFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++MH
Sbjct: 276 TVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGYQSLHTTIIGPGGKPLEIQIRTEKMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QIAEYGVAAHWAYKEG 351
>gi|259500575|ref|ZP_05743477.1| GTP diphosphokinase [Lactobacillus iners DSM 13335]
gi|302191266|ref|ZP_07267520.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus iners AB-1]
gi|329920168|ref|ZP_08276999.1| GTP diphosphokinase [Lactobacillus iners SPIN 1401G]
gi|259167959|gb|EEW52454.1| GTP diphosphokinase [Lactobacillus iners DSM 13335]
gi|328936622|gb|EGG33066.1| GTP diphosphokinase [Lactobacillus iners SPIN 1401G]
Length = 750
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/316 (45%), Positives = 197/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA++G + VAAG LHDT++D ++ + I + FG VA +V
Sbjct: 43 FRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVTNEDIKKEFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 EGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSE--R 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E ++SAI L+ L D I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 ERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHKEFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++MH
Sbjct: 276 TVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGYQSLHTTIIGPGGKPLEIQIRTEKMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QIAEYGVAAHWAYKEG 351
>gi|118471771|ref|YP_887284.1| GTP pyrophosphokinase [Mycobacterium smegmatis str. MC2 155]
gi|399987301|ref|YP_006567650.1| GTP pyrophosphokinase RelA [Mycobacterium smegmatis str. MC2 155]
gi|441208103|ref|ZP_20973829.1| GTP pyrophosphokinase [Mycobacterium smegmatis MKD8]
gi|118173058|gb|ABK73954.1| GTP pyrophosphokinase [Mycobacterium smegmatis str. MC2 155]
gi|399231862|gb|AFP39355.1| GTP pyrophosphokinase RelA [Mycobacterium smegmatis str. MC2 155]
gi|440627577|gb|ELQ89385.1| GTP pyrophosphokinase [Mycobacterium smegmatis MKD8]
Length = 797
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 208/345 (60%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG+ V LV
Sbjct: 105 LRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLEALTADFGSEVGHLV 164
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 165 DGVTKLDKV--------VLGSAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 216
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 217 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEIVRLVADRAPSRDT 276
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ AL I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 277 YLAKVRAEIGVALSAMKIN-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEI 335
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT+EMH
Sbjct: 336 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTREMHRT 395
Query: 298 AEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 396 AEYGIAAHWRYKEAKGRNGVPHSHAAAEIDDMAWMRQLLDWQREA 440
>gi|423062390|ref|ZP_17051180.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
gi|406716298|gb|EKD11449.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
Length = 741
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 12/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +L +G+++ +VAAG LHD ++D ++ + + FG V LVE
Sbjct: 38 RKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDIIEDTDVTPEELESHFGPEVRHLVE 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+ N + + +A+ MFLAMA D R +++KLADRLHNM TL+ +
Sbjct: 98 GVTKLSKF------NFSNTTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEFMSE 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A ET EIF PLANRLGI K +LE+L FK++ P+ + E+ ++ + E
Sbjct: 152 SKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEAYREIQIRVADRRATREEK 211
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + + L ++ I + GR K LY I+ KM ++ EI+DI LRLIVE E
Sbjct: 212 LAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQFHEIYDIAALRLIVETNE 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH A
Sbjct: 272 ECYRALAIVHDSYRPIPGRFKDYIGLPKPNRYQSLHTGVIGNTGRPVEVQIRTVEMHHVA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
E+G AAHW+YKE + + E W R +L WQ +
Sbjct: 332 EYGIAAHWKYKETGGSEFGKLTETDEKFTWLRQLLEWQSD 371
>gi|312874138|ref|ZP_07734172.1| GTP diphosphokinase [Lactobacillus iners LEAF 2052A-d]
gi|311090208|gb|EFQ48618.1| GTP diphosphokinase [Lactobacillus iners LEAF 2052A-d]
Length = 750
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/316 (45%), Positives = 197/316 (62%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG PY++H + A LA++G + VAAG LHDT++D ++ + I + FG VA +V
Sbjct: 43 FRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVTNEDIKKEFGKDVAFIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL ++ + + AD M +AMA D R +++KLADRLHNM TLD L
Sbjct: 103 EGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+ + SK E
Sbjct: 159 PDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSE--R 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E ++SAI L+ L D I + + GR K +YSI+ KM+ K EI+D+ +R+IV+
Sbjct: 217 ERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHKEFSEIYDLLAVRVIVK 275
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++MH
Sbjct: 276 TVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGYQSLHTTIIGPGGKPLEIQIRTEKMH 335
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 336 QIAEYGVAAHWAYKEG 351
>gi|302877631|ref|YP_003846195.1| (p)ppGpp synthetase I SpoT/RelA [Gallionella capsiferriformans
ES-2]
gi|302580420|gb|ADL54431.1| (p)ppGpp synthetase I, SpoT/RelA [Gallionella capsiferriformans
ES-2]
Length = 702
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 247/452 (54%), Gaps = 45/452 (9%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +L + ++ + A LLHD ++D ++ + I FG VA+LV
Sbjct: 39 RQSGDPYVTHPIAVARILTPLHLDAQSIIAALLHDVVEDTEITTEQIAEQFGKPVAELVG 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ RE+ +A+ M LAMA D R +LIKLADRLHNM TLD++
Sbjct: 99 GLSKLEKIHFETRED------AQAENFRKMLLAMARDVRVILIKLADRLHNMRTLDSMRQ 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K +R A+ET+EI+ P+ANRLG++ ++L++L FKHL+P+++T L+ K+ +
Sbjct: 153 DKCERIARETMEIYAPIANRLGLNEIYLELQDLSFKHLHPNRYTVLAKALKVARGNRREV 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V ++ + L+ K + V GR K++YSI+ KM K L E+ DIYG R++VE+
Sbjct: 213 VGKILDAIRGQLEKKQVQAEV-TGREKNIYSIYKKMQLKSLAFSEVLDIYGFRVLVEDTN 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY AL +H L+ +PGK+KDYI PK NGYQSLH+ + G P+EVQIRT+EMH A
Sbjct: 272 ACYLALGALHALYKPIPGKIKDYIAIPKSNGYQSLHSTLFGPFGTPIEVQIRTREMHKIA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPS 358
+ G A+HW YK G S + +W + +L E+++ R+ + +K FP
Sbjct: 332 DAGVASHWLYKNGHATISELHKKTHQWLQELL----ESLNDSRTSAEFMEHLKVDL-FP- 385
Query: 359 HADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFP 418
D + + P K + P +T +D +S +
Sbjct: 386 ---DAVYIFTP----------------KGKILSLPRGATAVDFA---------YSVHTDI 417
Query: 419 LKEELRPRLNHKAVGDPRCKLKMGDVVELTPA 450
+ ++NH+ V R +LK GD VE+ A
Sbjct: 418 GNRCIAVKINHELV-PLRSELKNGDRVEIITA 448
>gi|419717375|ref|ZP_14244759.1| GTP pyrophosphokinase, partial [Mycobacterium abscessus M94]
gi|382938387|gb|EIC62724.1| GTP pyrophosphokinase, partial [Mycobacterium abscessus M94]
Length = 749
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 205/345 (59%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H V A +LA +G ++T + A +LHDT++D S + + FG VA LV
Sbjct: 57 FRKSGDPYITHPVAVANILAELGMDTTTLVAAILHDTVEDTGYSLEQLTAEFGTEVAHLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 117 DGVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 168
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 169 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 228
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L IS V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 229 YLAKVRAEIVATLNSSRISATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEI 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT++MH
Sbjct: 288 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVVGPEGKPLEVQIRTRDMHRT 347
Query: 298 AEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 348 AEYGIAAHWRYKEAKGRNGVPPTHAAAEIDDMAWMRQLLDWQREA 392
>gi|86740082|ref|YP_480482.1| (p)ppGpp synthetase I [Frankia sp. CcI3]
gi|86566944|gb|ABD10753.1| (p)ppGpp synthetase I [Frankia sp. CcI3]
Length = 862
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 210/354 (59%), Gaps = 28/354 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG PY+ H + A +LA +G ++ ++A LLHDTL++ L+ D I TFG +A +V
Sbjct: 159 VRFSGHPYITHPIAVASILADLGMDTATLSAALLHDTLEETTLTVDAIRDTFGDHIALIV 218
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+ VSKL+++ + +A+ + M +AMA D RA+++KLADRLHNM TL LP
Sbjct: 219 DAVSKLNRVK--------VGEAAQAETIRRMVVAMARDPRALVVKLADRLHNMRTLRFLP 270
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A+ETLE++ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 271 EHKQERKARETLEVYAPLAHRLGMNSLKWELEDLSFAALYPKRYDEIVRLVADRAPSRDV 330
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +++ L+D I V+ GR K YSI+ KM+ + + D+I+D+ G+R++V++
Sbjct: 331 YLAEVIGQVQVGLRDARIK-AVVSGRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVDSV 389
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L VH W +PG+ KDYI PKFN YQSLHT V G P+E+QIRT MH +
Sbjct: 390 RDCYATLGTVHATWKPIPGRFKDYIAMPKFNMYQSLHTTVIGPEGKPVELQIRTHAMHNR 449
Query: 298 AEFGFAAHWRYKEGDCQHSSFV----------------LQMVEWARWVLTWQCE 335
AE+G AAHW+YKE ++ W R VL WQ E
Sbjct: 450 AEYGIAAHWKYKEDGVAARPSAGTPEGGRAGRRKGGPDADLMTWLRQVLDWQRE 503
>gi|444431948|ref|ZP_21227108.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia soli NBRC 108243]
gi|443887122|dbj|GAC68829.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia soli NBRC 108243]
Length = 811
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 206/346 (59%), Gaps = 19/346 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + + FG+ VA LV
Sbjct: 118 VRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLEQLESEFGSEVAHLV 177
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 178 DGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 229
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 230 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDT 289
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + AL IS V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 290 YLARVRADINNALSAARISATV-EGRPKHYWSIYQKMIVKGREFDDIHDLVGMRILCDQV 348
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT +MH
Sbjct: 349 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTTDMHRT 408
Query: 298 AEFGFAAHWRYKEGDCQ-------HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE + S + + W R +L WQ EA
Sbjct: 409 AEFGIAAHWRYKETRNRGKTAKRPSDSAEIDDMAWMRQLLDWQREA 454
>gi|253997766|ref|YP_003049829.1| (p)ppGpp synthetase I SpoT/RelA [Methylovorus glucosetrophus
SIP3-4]
gi|313199830|ref|YP_004038488.1| (p)ppGpp synthetase I SpoT/RelA [Methylovorus sp. MP688]
gi|253984445|gb|ACT49302.1| (p)ppGpp synthetase I, SpoT/RelA [Methylovorus glucosetrophus
SIP3-4]
gi|312439146|gb|ADQ83252.1| (p)ppGpp synthetase I, SpoT/RelA [Methylovorus sp. MP688]
Length = 740
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 10/339 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H V A +LA + + + A LLHD ++D ++ + FG VA+LV
Sbjct: 61 LRKSGEPYITHPVSVACILAELHMDVPTLVAALLHDVVEDTGVTTQEVSERFGKQVAELV 120
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+G+SKL ++ K + E +A+ M LAM+ D R +L+KLADRLHNM TL +
Sbjct: 121 DGLSKLDKI-KFSTETEA-----QAENFRKMLLAMSQDVRVILVKLADRLHNMSTLGVMT 174
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
KR+R A+ETLEI+ P+ANRLG++ +LE+L FKHL P +++ +S ++ +
Sbjct: 175 PEKRRRTARETLEIYAPIANRLGLNAIYQELEDLSFKHLYPMRYSVISKAILAARGNRKE 234
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+V ++ + + L + +I V GR K LYSI+ KM K +T +I+DIYG R+IV++
Sbjct: 235 VVGKILDAIRERLGEMHIEAEV-TGREKHLYSIYRKMTGKTVTFSQIYDIYGFRIIVKDL 293
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY AL V+H L+ +PGK KDYI PK NGYQSLHT + G P+EVQIR++EMH
Sbjct: 294 SSCYLALGVLHGLYKPIPGKFKDYIAIPKANGYQSLHTTLFGPFGTPIEVQIRSREMHNI 353
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
A+ G AAHW YK D + Q +W + +L Q E+
Sbjct: 354 ADAGVAAHWLYKTTDAHLTELQQQTHQWLQRLLDIQSES 392
>gi|347532608|ref|YP_004839371.1| (p)ppGpp synthetase I SpoT/RelA [Roseburia hominis A2-183]
gi|345502756|gb|AEN97439.1| (p)ppGpp synthetase I, SpoT/RelA [Roseburia hominis A2-183]
Length = 788
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 207/348 (59%), Gaps = 17/348 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD L+D ++ D I F V LV+
Sbjct: 75 RKSGEPYIVHPLCVAIILAELELDKETIAAGLLHDVLEDTVMTADEIKEEFSEEVLLLVD 134
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLH-------TMFLAMA-DARAVLIKLADRLHNMM 113
GV+KL L +N K A+RL MFLAMA D R +LIKLADRLHNM
Sbjct: 135 GVTKLRHLHLTDNSHNHDQKDRSAERLEMQAENLRKMFLAMAKDIRVILIKLADRLHNMR 194
Query: 114 TLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE- 172
TL + R A+ET EI+ P+A RLGIS K++L++L K+L P+ + +L ++ +
Sbjct: 195 TLKYQSKEAQIRIARETQEIYCPIAQRLGISKIKIELDDLSLKYLEPEAYYDLVRQIDQR 254
Query: 173 -CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 231
+ V S +E++ +K I + GR K +SI+ KM+ + T+D+I+D++ +R
Sbjct: 255 KSVRDDYVQSLVEEVRAHIKAAGI-VAEIEGRAKHFFSIYKKMVNQDKTLDQIYDLFAIR 313
Query: 232 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRT 291
+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT
Sbjct: 314 IIVDSVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPTGQPFEIQIRT 373
Query: 292 KEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMV------EWARWVLTWQ 333
EMH AE+G AAHW+YKE + V V W R +L WQ
Sbjct: 374 YEMHRTAEYGIAAHWKYKEASNNGGAAVPMTVTEEEKLSWLRQILEWQ 421
>gi|311739550|ref|ZP_07713385.1| GTP diphosphokinase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311305366|gb|EFQ81434.1| GTP diphosphokinase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 762
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 209/343 (60%), Gaps = 18/343 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 69 FRKSGEPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTDYSLEDLTRDFGPEVARLV 128
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMA D R ++IK++DRLHNM T+ LP
Sbjct: 129 DGVTKLDKVA--------LGSAAEAETIRKMIVAMATDPRVLVIKVSDRLHNMRTMRFLP 180
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE---CFDE 176
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + D
Sbjct: 181 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEIVRMVADRAPSRDR 240
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A+ I ++ ALK+ I V+ GR K +SI+ KM+ + EI D+ G+R++VE+
Sbjct: 241 AL-KEIISQVSGALKENGIEAEVM-GRPKHYWSIYQKMIVRGRDFAEIFDLVGIRILVED 298
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
CY A+ VVH ++ +PG+ KDYI+ P+F YQSLHT V +G LEVQ+RT EMH
Sbjct: 299 VNSCYAAIGVVHSIYQALPGRFKDYISSPRFGVYQSLHTTVLADGGATLEVQVRTHEMHY 358
Query: 297 QAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE + H V QM W R +L WQ EA
Sbjct: 359 NAEFGVAAHWRYKETKGKNSGHQEEVDQMA-WMRQLLDWQKEA 400
>gi|260578820|ref|ZP_05846727.1| GTP diphosphokinase [Corynebacterium jeikeium ATCC 43734]
gi|258603118|gb|EEW16388.1| GTP diphosphokinase [Corynebacterium jeikeium ATCC 43734]
Length = 755
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 209/340 (61%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A + A IG ++T V A LLHDT++D S + + R FG+ VA LV+
Sbjct: 65 RKSGEPYITHPLAVATIAAEIGMDTTTVVAALLHDTVEDTDYSLEDLSRDFGSEVARLVD 124
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ EA+ + M +AMA D R ++IK++DRLHNM T+ LP
Sbjct: 125 GVTKLDKV--------VLGSAAEAETIRKMIVAMAEDPRVLVIKVSDRLHNMRTMRFLPP 176
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ + A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 177 EKQAKKARETLEVIAPLAHRLGMATVKWELEDLAFAILYPKKYDEIVRLVADRAPKRDQY 236
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +++E A+ ++ V GR K +SI+ KM+ + DEI D+ G+R++V++ +
Sbjct: 237 LAKVKQEIELAMSRSSLHATV-EGRPKHYWSIYQKMIVRGRDFDEIFDLVGVRILVDSVQ 295
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ +H L+ +PG+ KDYI+ P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 296 DCYAAVGAIHTLYQPMPGRFKDYISSPRFGVYQSLHTTVIGPDTKPLEVQIRTHEMHHNA 355
Query: 299 EFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKE G+ S + + W R +L WQ EA
Sbjct: 356 EYGIAAHWRYKETRGNNNSESAEVDQMAWMRQLLDWQKEA 395
>gi|307243827|ref|ZP_07525958.1| GTP diphosphokinase [Peptostreptococcus stomatis DSM 17678]
gi|306492830|gb|EFM64852.1| GTP diphosphokinase [Peptostreptococcus stomatis DSM 17678]
Length = 741
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 210/337 (62%), Gaps = 11/337 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H V A +LA + + + GLLHD ++D I FG VA LV
Sbjct: 40 FRKSGEPYIIHPVAVANILADMELDIDTICGGLLHDVVEDTDFEEADIEEMFGKDVAALV 99
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + +E + AS L MF+AMA D R +LIKL+DRLHNM TL+ +
Sbjct: 100 DGVTKLGKIKYMTKEESQASN------LRKMFMAMAKDMRVMLIKLSDRLHNMRTLEYMD 153
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K + A+ETL+I+ +A+RLGIST K +LE+L F+ L PD++ EL +++ + + EA
Sbjct: 154 SNKVKYKAQETLDIYAGIAHRLGISTIKWELEDLAFRFLYPDEYYELVNRVNKKREQREA 213
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +++ + DK + V GR K YSI KM KK + DEI+D+ +R++V+ +
Sbjct: 214 YIDEIVTIIKKDMDDKGVECDVY-GRPKHFYSIFKKMKKKNKSFDEIYDLTAVRVLVDTD 272
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L VH LW +PG+ KDYI PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 273 RDCYAVLGEVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGSDGEPVEIQIRTYEMHNV 332
Query: 298 AEFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQ 333
AEFG AAHW+YKEG +S S V + ++W R ++ W+
Sbjct: 333 AEFGIAAHWKYKEGVTDNSLSDVDRRLQWLRQMMEWE 369
>gi|242241344|ref|YP_002989525.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Dickeya dadantii
Ech703]
gi|242133401|gb|ACS87703.1| (p)ppGpp synthetase I, SpoT/RelA [Dickeya dadantii Ech703]
Length = 700
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 202/340 (59%), Gaps = 10/340 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY+ H V A +LA + + + A LLHD ++D +Y I R FG VA+LVE
Sbjct: 39 RSSGEPYITHPVAVACILAEMRLDYETLMAALLHDVIEDTPATYQDIERLFGKSVAELVE 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +L + K +A+ M +AM D R +LIKLADR HNM TL +L
Sbjct: 99 GVSKLDKLKFRDK------KEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ + K + M
Sbjct: 153 DKRRRIARETLEIYSPLAHRLGIHHLKTELEELGFEALYPNRYRVIKEVVKAARGNRKEM 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + ++E LK+ IS V GR K LYSI+CKM K+ I DIY R+IV+ +
Sbjct: 213 IQKILSEIEGRLKEAGISCRV-SGREKHLYSIYCKMHLKEQRFHSIMDIYAFRVIVKEVD 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY+ L VH L+ P ++KDYI PK NGYQSLHT + G VP+EVQIRT++M A
Sbjct: 272 TCYRVLGQVHSLYKPRPARVKDYIAIPKANGYQSLHTSLIGPHGVPVEVQIRTEDMDQMA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
E G AAHW YKEG+ ++ ++ W + +L Q A S
Sbjct: 332 EMGVAAHWAYKEGESSSTTAQVRAQRWMQSLLELQQSAGS 371
>gi|456865837|gb|EMF84149.1| putative GTP diphosphokinase [Leptospira weilii serovar Topaz str.
LT2116]
Length = 674
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 240/455 (52%), Gaps = 58/455 (12%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S D + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HNM TL
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNMRTLSFQL 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 353
M+ AE+G AAHW YKEG S ++ V W + +WQ DS P
Sbjct: 333 MNDIAEYGIAAHWMYKEGKPSVSEKNVK-VRWLELLSSWQ--------------DSALDP 377
Query: 354 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD----------LLE 403
F ++ + H+ VFV K + + P +T++D L
Sbjct: 378 KEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATILDFAFRIHTDVGLKA 426
Query: 404 RAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
+ GR + R PL+ E+R + + D R K
Sbjct: 427 KGGRINGRM----LPLRTEIRSGDQIEIITDKRTK 457
>gi|78065581|ref|YP_368350.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia sp. 383]
gi|77966326|gb|ABB07706.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. 383]
Length = 788
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 205/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ +E ++A+ D I + GR K++YS++ KM K+L+ ++ D+YG R++V++
Sbjct: 264 ISKILEAAQRAMADAKIDAEI-TGREKTIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G S + +W + +L Q EA
Sbjct: 383 EAGGAAHWLYKNGSADLSDVQKRAHQWLKSLLDIQSEA 420
>gi|315924148|ref|ZP_07920374.1| GTP diphosphokinase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622550|gb|EFV02505.1| GTP diphosphokinase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 723
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 205/338 (60%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H V A +LA ++ + A L+HD ++D ++ I F A +ADLVE
Sbjct: 45 RKSGEEYIIHPVAVAYILAEYKMDTETICAALMHDVIEDTDYTHKQIATIFNARIADLVE 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ ++E + +A+ L M +AM+ D R +LIKL DRLHNM TL+ +
Sbjct: 105 GVTKIGKIEYQSKEES------QAEYLRKMVMAMSRDIRVILIKLVDRLHNMRTLEYMNP 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K+Q A+ETL+I+ P+ANRLGI K +LE+L K+L+P+ + +L K+ + E
Sbjct: 159 AKQQEKARETLDIYAPIANRLGIQAIKGELEDLSLKYLDPEGYYDLVKKVKARKQVREEY 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V I L+ + + I + GR K YSI+ KM + DEI+D+ +R+IV++ +
Sbjct: 219 VDQVIVILKAKIDETGIPCKIY-GRSKHFYSIYRKMKAQHRQFDEIYDLIAVRVIVDSIK 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH W +PG+ KDYI PK N YQS+HT V G P EVQIRTKEMH A
Sbjct: 278 DCYGVLGLVHTEWKPIPGRFKDYIAMPKPNMYQSIHTTVIGPNGDPFEVQIRTKEMHRVA 337
Query: 299 EFGFAAHWRYKEGDC-QHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKEG + ++ + + W R ++ WQ E
Sbjct: 338 EYGIAAHWKYKEGKTGEKNAHYEKRIAWIRQIMEWQQE 375
>gi|161507422|ref|YP_001577376.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
gi|160348411|gb|ABX27085.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
Length = 746
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 195/318 (61%), Gaps = 18/318 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG PY++H + A LA +G + + AG LHDT++D ++ D + FG GVA +V+
Sbjct: 44 RASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHDTVEDTPVTNDELKEKFGEGVAFIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL L
Sbjct: 104 GVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD----- 175
K++ A ET++I+ PLA+RLGI T K +LE++ F +LNP E ++V D
Sbjct: 158 DKQRWIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP----EAYYRIVNLMDVKRSQ 213
Query: 176 -EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
E + I+ L++ L + I + + GR K +YSI+ KM+ K DEI+D+ +R+IV
Sbjct: 214 REKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIV 272
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++M
Sbjct: 273 KNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTIIGPGGRPLEIQIRTEQM 332
Query: 295 HLQAEFGFAAHWRYKEGD 312
H AE+G AAHW YK G+
Sbjct: 333 HEVAEYGVAAHWAYKRGN 350
>gi|387138766|ref|YP_005694745.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis CIP
52.97]
gi|349735244|gb|AEQ06722.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis CIP
52.97]
Length = 746
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 213/341 (62%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 57 FRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLEDLTRDFGEEVARLV 116
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AM+ D R ++IK+ADRLHNM T+ L
Sbjct: 117 DGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLS 168
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 169 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEVVRLVADRAPSRDR 228
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +L+QALK+ +I V+ GR K +SI+ KM+ + ++I D+ G+R++V++
Sbjct: 229 YLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDIFDLVGIRILVDSI 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ PLEVQ+RT EMH
Sbjct: 288 NNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKPLEVQVRTHEMHFN 347
Query: 298 AEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 AEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 388
>gi|255658298|ref|ZP_05403707.1| GTP diphosphokinase [Mitsuokella multacida DSM 20544]
gi|260849615|gb|EEX69622.1| GTP diphosphokinase [Mitsuokella multacida DSM 20544]
Length = 740
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 209/339 (61%), Gaps = 13/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + A +L + + ++A LLHD ++D + D + FG VA L++
Sbjct: 46 RVSGEAYIIHPLHVAQILTQLHLDDATISAALLHDVVEDTIYTNDQMKEMFGDEVAMLID 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L ++E + + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 106 GVTKLGRLQYKSKEE------AQLESYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMRE 159
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++R A+ET+EI+ PLANRLGIS+ K +LE+LC ++L P+ + +L + + E
Sbjct: 160 DKQKRIARETIEIYAPLANRLGISSIKWELEDLCLRYLEPEIYYDLVENVKQKRKERQTF 219
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++IE++++ L + +I + GR K YSI+ KM + + EI+D+ +R++V++ +
Sbjct: 220 IDTSIEQIKEKLAEAHIKADI-SGRAKHFYSIYKKMKRDNKELSEIYDLSAVRVLVDSVK 278
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G PLE+QIRT MH +
Sbjct: 279 DCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRGY-PLEIQIRTFAMHQVS 337
Query: 299 EFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKE + + V Q + W R ++ Q E
Sbjct: 338 EYGVAAHWKYKEAGKGAKATGAVDQKMSWLRQMVNLQQE 376
>gi|297588487|ref|ZP_06947130.1| GTP diphosphokinase [Finegoldia magna ATCC 53516]
gi|297573860|gb|EFH92581.1| GTP diphosphokinase [Finegoldia magna ATCC 53516]
Length = 723
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 202/336 (60%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY +H + A +LA++ + + AGL HD ++D ++Y+ + F +ADLV
Sbjct: 42 FRNSGEPYAIHPMAVAKILASLNMDDATIIAGLFHDVVEDTEITYEDLEYLFSKEIADLV 101
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL Q+ +++N +A+ L M LAMA D R ++IKL+DRLHNM TL+ +
Sbjct: 102 DGVTKLKQIKFKTKKDN------QAENLKKMILAMAKDIRVIIIKLSDRLHNMRTLEYMT 155
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+ A E LEI+ PLA+RLG+ST K +LE+L K+L P+ + ++ +K+ E E+
Sbjct: 156 REKQIEKANEVLEIYAPLAHRLGMSTIKWELEDLSLKYLEPNIYQDIVNKINETRQQRES 215
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I + + L+ NI + GR KS++SI+ KM KK L +EI D+ +R+IV E
Sbjct: 216 QIQNIIRQFQDELEKYNIKAEIF-GRPKSVFSIYKKMYKKHLAFEEIKDLSAIRVIVNKE 274
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY L + H+ + +P KDYI PK N YQSLHT + E+QIRT EMH
Sbjct: 275 SECYDVLGIAHRFFRPIPNTFKDYIATPKPNMYQSLHTTILAHDGRTYEIQIRTWEMHKT 334
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
+E+G AAHW+YKEG S + W R ++ WQ
Sbjct: 335 SEYGIAAHWKYKEGTTNKKSKYDSKLAWLREIMDWQ 370
>gi|422502180|ref|ZP_16578425.1| GTP diphosphokinase [Propionibacterium acnes HL027PA2]
gi|315084168|gb|EFT56144.1| GTP diphosphokinase [Propionibacterium acnes HL027PA2]
Length = 774
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 203/339 (59%), Gaps = 22/339 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + M+LA +G + + AGLLHDT++D + + + FG +A LV+
Sbjct: 88 RKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYTNEQLTADFGEEIALLVD 147
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AM+ D R ++IKLADRLHNM TL L
Sbjct: 148 GVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRP 199
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+ + E EA
Sbjct: 200 DKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEIVHMVAERAPQREAQ 259
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I + Q L + I +V GR K YSI+ KM+ + +I+D+ GLR++V+
Sbjct: 260 LKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDFSDIYDLTGLRILVDTPR 318
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL V+H W +PG+ K YI PK+N YQSLHT V G G P+E+QIRT EMH +A
Sbjct: 319 DCYAALGVMHVRWNPLPGRFKYYIAMPKYNMYQSLHTTVLGPGGQPVELQIRTHEMHRRA 378
Query: 299 EFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 327
E+G AAHW+YKE D S+V + +W++
Sbjct: 379 EYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|271967384|ref|YP_003341580.1| GTP diphosphokinase [Streptosporangium roseum DSM 43021]
gi|270510559|gb|ACZ88837.1| GTP diphosphokinase [Streptosporangium roseum DSM 43021]
Length = 785
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 205/342 (59%), Gaps = 17/342 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G + + A LLHDT++D D + FG +A LV+
Sbjct: 94 RKSGDPYITHPLAVATILAELGTDDETLCAALLHDTVEDTAYGLDELRSDFGDNIALLVD 153
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ +A+ + M +AM+ D R ++IKLADRLHNM T+ LP
Sbjct: 154 GVTKLDKVK--------FGDAAQAETVRKMVVAMSRDIRVLVIKLADRLHNMRTMRYLPE 205
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
KRQ+ ++ETLEIF PLA+RLG++T K +LE+L F L P ++ E++ + E +
Sbjct: 206 HKRQQKSRETLEIFAPLAHRLGMNTIKWELEDLAFAMLYPKRYDEIARMVSERAPRRDLF 265
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IEK+ L++ I V+ GR K YS++ KM+ + + D+I+D+ G+R++V+
Sbjct: 266 LQEVIEKVSGDLREAKIR-AVVKGRPKHYYSVYQKMIARDVAFDDIYDLVGIRVLVDTVR 324
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL +H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT MH ++
Sbjct: 325 DCYAALGTIHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPEGKPVELQIRTHAMHHRS 384
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQM-----VEWARWVLTWQCE 335
E+G AAHW+YKE ++ + W R +L WQ E
Sbjct: 385 EYGVAAHWKYKEDMTAAGPPGAKLKPGNDMAWLRQLLDWQKE 426
>gi|169824507|ref|YP_001692118.1| GTP pyrophosphokinase [Finegoldia magna ATCC 29328]
gi|302380745|ref|ZP_07269210.1| putative GTP diphosphokinase [Finegoldia magna ACS-171-V-Col3]
gi|303233691|ref|ZP_07320345.1| putative GTP diphosphokinase [Finegoldia magna BVS033A4]
gi|417926542|ref|ZP_12569940.1| GTP diphosphokinase [Finegoldia magna SY403409CC001050417]
gi|167831312|dbj|BAG08228.1| GTP pyrophosphokinase [Finegoldia magna ATCC 29328]
gi|302311688|gb|EFK93704.1| putative GTP diphosphokinase [Finegoldia magna ACS-171-V-Col3]
gi|302495125|gb|EFL54877.1| putative GTP diphosphokinase [Finegoldia magna BVS033A4]
gi|341589057|gb|EGS32424.1| GTP diphosphokinase [Finegoldia magna SY403409CC001050417]
Length = 723
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 241/465 (51%), Gaps = 75/465 (16%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY +H + A +LA++ + + AGL HD ++D ++Y+ + F +ADLV
Sbjct: 42 FRNSGEPYAIHPMAVAKILASLNMDDATIIAGLFHDVVEDTEITYEDLEYLFSKEIADLV 101
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL Q+ +++N +A+ L M LAMA D R ++IKL+DRLHNM TL+ +
Sbjct: 102 DGVTKLKQIKFKTKKDN------QAENLKKMILAMAKDIRVIIIKLSDRLHNMRTLEYMT 155
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+ A E LEI+ PLA+RLG+ST K +LE+L K+L P+ + ++ +K+ E E+
Sbjct: 156 REKQIEKANEVLEIYAPLAHRLGMSTIKWELEDLSLKYLEPNIYQDIVNKINETRQQRES 215
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + I + + L+ NI + GR KS++SI+ KM KK L +EI D+ +R+IV E
Sbjct: 216 QIQNIIRQFQNELEKCNIKAEIF-GRPKSIFSIYKKMYKKHLAFEEIKDLSAIRVIVNKE 274
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY L + H+ + +P KDYI PK N YQSLHT + E+QIRT EMH
Sbjct: 275 SECYDVLGIAHRFFRPIPNTFKDYIATPKPNMYQSLHTTILAHDGRTYEIQIRTWEMHKT 334
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFP 357
+E+G AAHW+YKEG S + W R ++ WQ KD + DS + F
Sbjct: 335 SEYGIAAHWKYKEGTSNKKSKYDSKLAWLREIMDWQ-----KDYT-----DSKEFMDLFK 384
Query: 358 SH-ADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYG 416
A+D F Y P K V + P+ ST +D R
Sbjct: 385 EEFANDEVFVYSP----------------KGDVMDLPSGSTPIDFAYRV----------- 417
Query: 417 FPLKEELRPRLNHKAVGDPRC--------------KLKMGDVVEL 447
H AVG+ +C KLK G+VVE+
Sbjct: 418 ------------HSAVGN-KCVGAKVDGKIVPLTYKLKTGNVVEI 449
>gi|422344010|ref|ZP_16424937.1| hypothetical protein HMPREF9432_00997 [Selenomonas noxia F0398]
gi|355377758|gb|EHG24967.1| hypothetical protein HMPREF9432_00997 [Selenomonas noxia F0398]
Length = 743
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 210/340 (61%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGD Y++H + A +L + + + A LLHD ++D + + + FG + L+
Sbjct: 45 VRISGDAYIMHPLNVAYILTGLHLDDETICAALLHDVVEDTHATLEEMEAEFGRNIMALI 104
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 105 DGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
KR+R AKET+E++ PLANRLGIS+ KV+LE+LC ++L P+ + L ++ E
Sbjct: 159 EDKRRRIAKETIEVYAPLANRLGISSIKVELEDLCLRYLEPEAYYALVEEVKHKRQERQE 218
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +I+K+ + L+ +I + GR K YSI+ KM + +++EI+D+ +R++V +
Sbjct: 219 FILDSIQKIHEKLEAADIKAEI-KGRAKHFYSIYRKMKRDNKSVNEIYDLSAVRILVSSV 277
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G PLE+QIRT+ MH
Sbjct: 278 KDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRGY-PLEIQIRTEAMHRI 336
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 335
+EFG AAHW+YKE + Q + W R +++ Q E
Sbjct: 337 SEFGVAAHWKYKEAGRSIGVTDENDQKMSWLRQMVSLQKE 376
>gi|94985409|ref|YP_604773.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus geothermalis DSM
11300]
gi|94555690|gb|ABF45604.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus geothermalis DSM
11300]
Length = 766
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 210/344 (61%), Gaps = 34/344 (9%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYDYIFRTFGAGVADLV 60
R SG+PY+ H V A +LA +G ++ + AGLLHDT++D ++++ I R FG V +V
Sbjct: 47 RKSGEPYITHPVAVATILARLGMDTDSIMAGLLHDTVEDVDGVTFEVIEREFGPDVRRIV 106
Query: 61 EGVSKLSQLSKLARENNTASKT---VEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLD 116
EG +K+S+LSK + T ++A+ L M +AM D R +++KLADRLHNM TL
Sbjct: 107 EGETKVSKLSKQGSQQAEVRDTGRDLQAENLRQMLIAMTDDLRIIVVKLADRLHNMRTLG 166
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE 176
A+ K+QR A+ET++IF PLA+RLGI K +LE+L F++L PD + L S+L +E
Sbjct: 167 AMKPEKQQRIARETMDIFAPLAHRLGIGQIKWELEDLAFQYLQPDAYAYLQSRLRTRQEE 226
Query: 177 --AMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 229
A++ A+ +L +AL+D + +S + + GR K L+SIH KM ++ T+++I D+
Sbjct: 227 RDALIQQAVTQLREALEDDLELPEWVSDIDIAGRSKHLWSIHNKMQRENKTLEQIFDLLA 286
Query: 230 LRLIV----------------------ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKF 267
+R+I+ + CY + +VH +W +PG+ KDYI PK
Sbjct: 287 IRVILTPRPLSVPPGTDEKRRERAEETREKRICYHTVSIVHSIWTPLPGRFKDYIAVPKP 346
Query: 268 NGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 311
NGYQSLHT V + P+EVQIR++ MH AE+G AAHW YK+G
Sbjct: 347 NGYQSLHTTVISQSGQPIEVQIRSRRMHEVAEYGVAAHWMYKQG 390
>gi|334127724|ref|ZP_08501627.1| GTP diphosphokinase [Centipeda periodontii DSM 2778]
gi|333388860|gb|EGK60030.1| GTP diphosphokinase [Centipeda periodontii DSM 2778]
Length = 743
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 209/340 (61%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGD Y++H + A +L ++ + + A LLHD ++D + + + FG + +L+
Sbjct: 45 VRISGDAYIMHPLNVAYILTSLHLDDETICAALLHDVVEDTCATLEEMEAQFGKNIMELI 104
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 105 DGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA-- 177
KR R AKETLE++ PLANRLGIS KV+LE+LC ++L P+ + L ++ E
Sbjct: 159 EDKRHRIAKETLEVYAPLANRLGISNIKVELEDLCLRYLEPEAYYALVEEVKHKRQERQD 218
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +I+++ + L+ I + GR K YSI+ KM + +++EI+D+ +R++V +
Sbjct: 219 FIRESIQQIREKLEVAGIEAEI-KGRAKHFYSIYRKMKRDNKSVNEIYDLSAVRVLVSSV 277
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G PLE+QIRTK MH
Sbjct: 278 KDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHG-DPLEIQIRTKAMHQV 336
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 335
+EFG AAHW+YKE + Q + W R +++ Q E
Sbjct: 337 SEFGIAAHWKYKEAGRSIGATDENDQKMSWLRQMVSLQQE 376
>gi|350266929|ref|YP_004878236.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599816|gb|AEP87604.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 734
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 206/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +A G LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++++ +++ NI GR K +YSI+ KM+ + +EI+D+ +R++V + +
Sbjct: 218 VDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
E+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 337 EYGVAAHWAYKEGKAANEGATFEKKLSWFREILEFQNES 375
>gi|376001755|ref|ZP_09779611.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
PCC 8005]
gi|375329867|emb|CCE15364.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
PCC 8005]
Length = 764
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 12/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +L +G+++ +VAAG LHD ++D ++ + + FG V LVE
Sbjct: 61 RKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDIIEDTDVTPEELESHFGPEVRHLVE 120
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+ N + + +A+ MFLAMA D R +++KLADRLHNM TL+ +
Sbjct: 121 GVTKLSKF------NFSNTTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEFMSE 174
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A ET EIF PLANRLGI K +LE+L FK++ P+ + E+ ++ + E
Sbjct: 175 SKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEAYREIQIRVADRRATREEK 234
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + + L ++ I + GR K LY I+ KM ++ EI+DI LRLIVE E
Sbjct: 235 LAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQFHEIYDIAALRLIVETNE 294
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH A
Sbjct: 295 ECYRALAIVHDSYRPIPGRFKDYIGLPKPNRYQSLHTGVIGNTGRPVEVQIRTVEMHHIA 354
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
E+G AAHW+YKE + + E W R +L WQ +
Sbjct: 355 EYGIAAHWKYKETGGSEFGKLTETDEKFTWLRQLLEWQSD 394
>gi|322515562|ref|ZP_08068543.1| guanosine-3,5-bis 3-pyrophosphohydrolase [Actinobacillus ureae ATCC
25976]
gi|322118365|gb|EFX90631.1| guanosine-3,5-bis 3-pyrophosphohydrolase [Actinobacillus ureae ATCC
25976]
Length = 568
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 164/445 (36%), Positives = 238/445 (53%), Gaps = 24/445 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY+ H V A ++A + + V A LLHD ++D + + + FGA VA++V+
Sbjct: 39 RSSGEPYITHPVAVASIIAEMKLDHEAVMAALLHDVIEDTPYTEEQLAAEFGASVAEIVQ 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +L R+ + + M LAM D R VLIKLADR HNM TL L
Sbjct: 99 GVSKLDKLKFRTRQE------AQVENFRKMILAMTKDIRVVLIKLADRTHNMRTLGVLRP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT--ELSSKLVECFDEAM 178
KR+R AKETLEI+ PLA+RLGI K +LENLCF+ ++P ++ ++ + + +
Sbjct: 153 DKRRRIAKETLEIYSPLAHRLGIEHLKNELENLCFQAMHPHRYRVLRMAIDMARGTRQDL 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++S +++ L + I V GR K LYS++ KM ++ I DIY R++VEN +
Sbjct: 213 ISSISHEIQSRLDETGIKGRVY-GREKHLYSLYEKMRQRDQHFHSILDIYAFRVVVENLD 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L +H L+ P K++DYI PK NGYQSLHT + G VP+EVQIRT++M L A
Sbjct: 272 NCYRVLGQMHSLYKPRPYKIRDYIAVPKSNGYQSLHTSMIGHKGVPIEVQIRTEDMDLMA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD------RSCVGNGD-SIK 351
E G AAHWRY E +S + +W R ++ Q A + D +S + + D +
Sbjct: 332 ELGVAAHWRYTEDQTTATSVQQKAQQWLRSIIELQQSAGNSDEFIENVKSDLFSDDIYVF 391
Query: 352 PP----CTFPSHADDCPFSYKPQCS-HDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAG 406
P P+ A F+Y D V I+ N Q + TV L E+
Sbjct: 392 TPKGRIVELPAKATAIDFAYAVHSDIGDRCVGAIVDRNPYPISQPLQSGQTVEILTEQGK 451
Query: 407 RGSSRWSPYGFPLK--EELRPRLNH 429
R S W + K ++R L H
Sbjct: 452 RPSPSWLTFVVSAKARSKIRTALKH 476
>gi|443632083|ref|ZP_21116263.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348198|gb|ELS62255.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 734
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 206/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +A G LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++++ +++ NI GR K +YSI+ KM+ + +EI+D+ +R++V + +
Sbjct: 218 VEEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
E+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 337 EYGVAAHWAYKEGKAANEGATFEKKLSWFREILEFQNES 375
>gi|39997334|ref|NP_953285.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens PCA]
gi|409912678|ref|YP_006891143.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens KN400]
gi|39984225|gb|AAR35612.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens PCA]
gi|298506271|gb|ADI84994.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens KN400]
Length = 716
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 207/338 (61%), Gaps = 13/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H +E A +LA + + V GLLHDT++D + + + FGA VA+LV+
Sbjct: 39 RLSGEPYLVHPMEVAGVLADLKLDVPTVVTGLLHDTIEDTLTTREELEGMFGAEVANLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ +E + +A+ M LAMA D R +L+KLADRLHNM TL P
Sbjct: 99 GVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K++ ++ETL+I+ PLANRLGIS K +LE+L F++L P + +L+SK+ + E
Sbjct: 153 PKQRSISRETLDIYAPLANRLGISWIKSELEDLSFRYLEPQIYYDLASKVAKKKKER--E 210
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
S +E++ Q + K + + GR K LYSI KM + + +D+I+D+ +R++V +
Sbjct: 211 SYVEEVRQIIVSKLAEHDLKGDVFGRSKHLYSIWRKMQARNVDIDQIYDLVAIRVMVNDI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY+ L ++H W +PG+ KDYI PK N YQSLHT V G +EVQIRT +MH
Sbjct: 271 RECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGERMEVQIRTSDMHRV 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 331 AEAGIAAHWKYKEGKGYDEKEVKRFA-WLRQLLEWQQE 367
>gi|296331695|ref|ZP_06874164.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675346|ref|YP_003867018.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151290|gb|EFG92170.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413590|gb|ADM38709.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 734
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 206/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +A G LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++++ +++ NI GR K +YSI+ KM+ + +EI+D+ +R++V + +
Sbjct: 218 VDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
E+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 337 EYGVAAHWAYKEGKAANEGATFEKKLSWFREILEFQNES 375
>gi|254252971|ref|ZP_04946289.1| Guanosine polyphosphate pyrophosphohydrolase [Burkholderia dolosa
AUO158]
gi|124895580|gb|EAY69460.1| Guanosine polyphosphate pyrophosphohydrolase [Burkholderia dolosa
AUO158]
Length = 788
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 254/496 (51%), Gaps = 43/496 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E ++A+ D I + GR K++YSI+ KM K+L+ ++ D+YG R++V++
Sbjct: 264 IGKILEAAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTF-- 356
E G AAHW YK G + + +W + +L Q EA + P +
Sbjct: 383 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEFLEHVKIDLFPDAVYVF 442
Query: 357 ---------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 407
P A F+Y + I N+ + ++ S +++++
Sbjct: 443 TPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRTELKSGDIVEVIT---- 498
Query: 408 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELTPAIPDKSLTEYREEIQ 464
+PY P L KA R LK + + V+L + D+SL Y
Sbjct: 499 -----APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLGERLVDQSLKGY----- 548
Query: 465 RMYERGLAVSNTGPAV 480
GLA+++ P V
Sbjct: 549 -----GLALADVAPEV 559
>gi|310778489|ref|YP_003966822.1| (p)ppGpp synthetase I SpoT/RelA [Ilyobacter polytropus DSM 2926]
gi|309747812|gb|ADO82474.1| (p)ppGpp synthetase I, SpoT/RelA [Ilyobacter polytropus DSM 2926]
Length = 718
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 205/342 (59%), Gaps = 20/342 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGD Y++H +E + +L + ++ + AG+LHD ++D ++ I FG VA LV
Sbjct: 38 FRKSGDEYIIHPIEVSKILINMKMDTDTIVAGILHDIVEDTLITVSDIEYNFGNSVAKLV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS L K ++ + + + M +AMA D R V+IKLADRLHNM TL +P
Sbjct: 98 DGVTKLSVLPKGTKKQH--------ENIRKMIVAMAQDIRVVIIKLADRLHNMRTLKYMP 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFD 175
K++R ++ETLEIF PLA+RLG++ K +LE+L +L P+ + EL +SK E
Sbjct: 150 AHKQERISRETLEIFAPLAHRLGMAMIKCELEDLSLYYLEPEIYRELVKLINSKKAE--R 207
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E + +++E+ L + NI V GR K YSI+ KM +K DEI+D+ LR+IVE
Sbjct: 208 EKYTEATKKEIEKFLLENNIKGEV-SGRPKHFYSIYKKMYEKGKEFDEIYDLIALRIIVE 266
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
E +CY L V+H + VPG+ KDYI PK NGYQS+HT + G +EVQIRT+EMH
Sbjct: 267 TEGECYNVLGVLHGNYKPVPGRFKDYIAVPKSNGYQSIHTTIVGPQGKFIEVQIRTEEMH 326
Query: 296 LQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQCEA 336
AE G AAHW YKE G V W R +L WQ EA
Sbjct: 327 GIAEEGVAAHWSYKERGKVTKKDHVYS---WLRQILEWQQEA 365
>gi|221310698|ref|ZP_03592545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315022|ref|ZP_03596827.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221319943|ref|ZP_03601237.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324224|ref|ZP_03605518.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SMY]
gi|255767631|ref|NP_390638.2| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|321312288|ref|YP_004204575.1| GTP pyrophosphokinase [Bacillus subtilis BSn5]
gi|384176340|ref|YP_005557725.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|386759315|ref|YP_006232531.1| GTP diphosphokinase [Bacillus sp. JS]
gi|402776914|ref|YP_006630858.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis QB928]
gi|418032062|ref|ZP_12670545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428280212|ref|YP_005561947.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
gi|430755894|ref|YP_007208735.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452915236|ref|ZP_21963862.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
gi|251757446|sp|O54408.3|RELA_BACSU RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2739435|gb|AAC46041.1| (p)ppGpp synthetase [Bacillus subtilis subsp. subtilis str. JH642]
gi|225185259|emb|CAB14719.2| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
subtilis str. 168]
gi|291485169|dbj|BAI86244.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
gi|320018562|gb|ADV93548.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis BSn5]
gi|349595564|gb|AEP91751.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351470925|gb|EHA31046.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|384932597|gb|AFI29275.1| GTP diphosphokinase [Bacillus sp. JS]
gi|402482094|gb|AFQ58603.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis QB928]
gi|407959953|dbj|BAM53193.1| GTP pyrophosphokinase [Bacillus subtilis BEST7613]
gi|407965596|dbj|BAM58835.1| GTP pyrophosphokinase [Bacillus subtilis BEST7003]
gi|430020414|gb|AGA21020.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452115584|gb|EME05980.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
Length = 734
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 206/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +A G LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++++ +++ NI GR K +YSI+ KM+ + +EI+D+ +R++V + +
Sbjct: 218 VDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
E+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 337 EYGVAAHWAYKEGKAANEGATFEKKLSWFREILEFQNES 375
>gi|291301292|ref|YP_003512570.1| (p)ppGpp synthetase I SpoT/RelA [Stackebrandtia nassauensis DSM
44728]
gi|290570512|gb|ADD43477.1| (p)ppGpp synthetase I, SpoT/RelA [Stackebrandtia nassauensis DSM
44728]
Length = 787
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 207/346 (59%), Gaps = 23/346 (6%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + I FG VA LV
Sbjct: 90 FRKSGDPYITHPLAVASILAELGMDTTSLVAALLHDTVEDTDYTLEAITEDFGGEVALLV 149
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ KL +A+ + M +AMA D R ++IKLADRLHNM TL LP
Sbjct: 150 DGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLP 201
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+++ A ETLEI PLA+RLG++T K +LE+L F L ++ E+ + E E
Sbjct: 202 AAKQEQKAHETLEILAPLAHRLGMNTIKWELEDLSFATLYRKRYAEIGRLVAEHTPQREM 261
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ +++ L++ I V GR K LYSI+ KM+ + +I+D+ G+R++V +E
Sbjct: 262 LLAQVTDRVNADLREARIKATV-SGRPKHLYSIYQKMIVRGRDFSDIYDLVGIRILVNSE 320
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL V+H W VPG+ KD+I PKFN YQSLHT V G P+E+QIRT MH
Sbjct: 321 RDCYAALGVIHANWQPVPGRFKDFIAMPKFNMYQSLHTTVIGPTGKPVEMQIRTWAMHRT 380
Query: 298 AEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YKE G H + + W R +L WQ EA
Sbjct: 381 AEYGIAAHWKYKETKGATIAGPPAH----IDEMAWLRQLLDWQREA 422
>gi|160947570|ref|ZP_02094737.1| hypothetical protein PEPMIC_01505 [Parvimonas micra ATCC 33270]
gi|158446704|gb|EDP23699.1| RelA/SpoT family protein [Parvimonas micra ATCC 33270]
Length = 717
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 213/340 (62%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY +H V A +LA + + + AGL+HD L+D ++++ + FG +A+LV
Sbjct: 36 FRNSGEPYFIHPVAVANILADLYMDDATIIAGLMHDILEDTEVTFEEMSGMFGEEIANLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +++ + +AD L M LAM +D R ++IK+ADRLHN+ TL+ +
Sbjct: 96 DGVTKLKKIKYQSKQES------QADNLRKMLLAMNSDIRVIIIKIADRLHNIRTLEYMK 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ AKETLEI+ PLA RLG+S K +LE+L ++L P+ + +L+ ++ + E
Sbjct: 150 KAKQLEKAKETLEIYAPLAYRLGMSNVKWELEDLSLRYLEPEIYYDLAERVKKKRSEREK 209
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ IE++ +LK+ NI + GR KSLYSI+ KM K+ + DEI D+ +R+IV
Sbjct: 210 IINDIIEEISISLKEHNIQGEI-SGRPKSLYSIYKKMYKQNKSFDEIFDLTAIRIIVPTI 268
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLH-TVVTGEGLVPLEVQIRTKEMHL 296
DCY L +VH W +P + KDYI PK N YQSLH T+++ G V EVQIRT EMH
Sbjct: 269 SDCYAVLGIVHSKWKPIPSRFKDYIAVPKPNLYQSLHNTLISTSGDV-FEVQIRTFEMHR 327
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YK G + +SF ++ W R ++ WQ E
Sbjct: 328 TAEYGIAAHWKYKAGVDRSTSFDDKLT-WLRQLMDWQREV 366
>gi|333983378|ref|YP_004512588.1| (p)ppGpp synthetase I SpoT/RelA [Methylomonas methanica MC09]
gi|333807419|gb|AEG00089.1| (p)ppGpp synthetase I, SpoT/RelA [Methylomonas methanica MC09]
Length = 725
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 211/339 (62%), Gaps = 10/339 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+ Y+ H V A+ LA++ ++ + A +LHD ++D +S + + FG VA LV
Sbjct: 55 FRKSGEAYICHPVSVAITLASMHMDAHGIMAAILHDVIEDTPISKEQLAEEFGQEVAALV 114
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS++ +R +A+ + MFLAMA D R +++KLADRLHNM T+ +P
Sbjct: 115 DGVTKLSKIDSRSRAE------AQAENVRKMFLAMAQDLRVIVVKLADRLHNMQTMGNMP 168
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
+ K++R AKETLEI+ P+ANRLG++ + QLE+L FK L P++ T +S+ + + +
Sbjct: 169 MDKKRRIAKETLEIYAPIANRLGMNDIRHQLESLGFKALYPNRFTAISNAVKKSRGNRKE 228
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ + ++ L + +I V GR K++ SI+ KML KK++ ++ D+Y R+
Sbjct: 229 IIDTIQSSIQNRLLETDIDAKV-SGREKNIASIYQKMLHKKISFTDVFDVYAFRIYCHQV 287
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY+AL VH L+ +PG+ KDYI PK NGYQSLHT++ G VP+E+QIRT EMH
Sbjct: 288 DDCYRALGCVHNLFKPIPGRFKDYIALPKANGYQSLHTILIGPYGVPIEIQIRTHEMHRL 347
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
+E G AAHW YK + + + + EW R +L Q A
Sbjct: 348 SESGIAAHWLYKSDNEKSETIQARANEWLRDLLEIQKSA 386
>gi|255325089|ref|ZP_05366195.1| GTP pyrophosphokinase [Corynebacterium tuberculostearicum SK141]
gi|255297654|gb|EET76965.1| GTP pyrophosphokinase [Corynebacterium tuberculostearicum SK141]
Length = 762
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 208/343 (60%), Gaps = 18/343 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H + A + A IG ++T + A LLHDT++D S + + R FG VA LV
Sbjct: 69 FRKSGEPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTDYSLEDLTRDFGPEVARLV 128
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMA D R ++IK++DRLHNM T+ LP
Sbjct: 129 DGVTKLDKVA--------LGSAAEAETIRKMIVAMATDPRVLVIKVSDRLHNMRTMRFLP 180
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE---CFDE 176
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + D
Sbjct: 181 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEIVRMVADRAPSRDR 240
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A+ I ++ ALK+ I V+ GR K +SI+ KM+ + EI D+ G+R++VE+
Sbjct: 241 AL-KEIISQVSGALKENGIEAEVM-GRPKHYWSIYQKMIVRGRDFAEIFDLVGIRILVED 298
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
CY A+ VVH ++ +PG+ KDYI+ P+F YQSLHT V G LEVQ+RT EMH
Sbjct: 299 VNSCYAAIGVVHSIYQALPGRFKDYISSPRFGVYQSLHTTVLANGGATLEVQVRTHEMHY 358
Query: 297 QAEFGFAAHWRYKEG---DCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE + H V QM W R +L WQ EA
Sbjct: 359 NAEFGVAAHWRYKETKGKNSGHQEEVDQMA-WMRQLLDWQKEA 400
>gi|398342460|ref|ZP_10527163.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
inadai serovar Lyme str. 10]
Length = 674
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 240/449 (53%), Gaps = 46/449 (10%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V++AG+LHD ++D + D + FG + LV
Sbjct: 44 FRLSGEPYIVHPLQVGYILYELGLDEKVISAGILHDVIEDTKYTRDNMVSDFGTEITQLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ +RE T A+ + + +A + D R +LIKLAD+ HNM TL P
Sbjct: 104 EGVTKISEIKSQSRE------TEAAENIRKIIIATIQDIRVILIKLADKTHNMRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
K++R A ETL ++ P+A RLGI K +LE+L F+ + P+++ ++ ++ ++
Sbjct: 158 PEKQRRIANETLSLYAPIAGRLGIYKVKSELEDLAFQVIYPEEYQDIKKRI--NVKKSER 215
Query: 180 TSAIEKLEQALKDK----NISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
I+KL+ LK + NI+ V GR K +SI+ KM K+ T DEI D+ +R+I +
Sbjct: 216 EEYIDKLQIILKQRLAEININAQV-DGRAKHFFSIYRKMKTKEKTFDEIFDLRAIRIITD 274
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT EM+
Sbjct: 275 EIKDCYGVLGIVHTLWTPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTAEMN 334
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCT 355
AEFG AAHW YKEG H++ V+W + +WQ DS P
Sbjct: 335 AIAEFGIAAHWVYKEGKT-HANERHLTVKWLEVLQSWQ--------------DSALDPKE 379
Query: 356 FPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRG------S 409
F ++ + H+ VFV K + + P +TV+D R
Sbjct: 380 F---LEELKYDL-----HEDEVFVF---TPKGEIIQLPKGATVLDFAFRIHTDVGLHCKG 428
Query: 410 SRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
++ + PL+ ELR + V D R K
Sbjct: 429 AKINSRMIPLRTELRSGDQVEVVVDKRSK 457
>gi|68536125|ref|YP_250830.1| GTP pyrophosphokinase [Corynebacterium jeikeium K411]
gi|68263724|emb|CAI37212.1| GTP pyrophosphokinase [Corynebacterium jeikeium K411]
Length = 755
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 209/340 (61%), Gaps = 14/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A + A IG ++T V A LLHDT++D S + + R FG+ VA LV+
Sbjct: 65 RKSGEPYITHPLAVATIAAEIGMDTTTVVAALLHDTVEDTDYSLEDLSRDFGSEVARLVD 124
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ EA+ + M +AMA D R ++IK++DRLHNM T+ LP
Sbjct: 125 GVTKLDKV--------VLGSAAEAETIRKMIVAMAEDPRVLVIKVSDRLHNMRTMRFLPP 176
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ + A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 177 EKQAKKARETLEVIAPLAHRLGMATVKWELEDLAFAILYPKKYDEIVRLVADRAPKRDQY 236
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +++E A+ ++ V GR K +SI+ KM+ + DEI D+ G+R++V++ +
Sbjct: 237 LAKVKQEIELAMSRSSLHATV-EGRPKHYWSIYQKMIVRGRDFDEIFDLVGVRILVDSVQ 295
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ +H L+ +PG+ KDYI+ P+F YQSLHT V G PLEVQIRT EMH A
Sbjct: 296 DCYAAVGAIHTLYQPMPGRFKDYISSPRFGVYQSLHTTVIGPDNKPLEVQIRTHEMHHNA 355
Query: 299 EFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKE G+ S + + W R +L WQ EA
Sbjct: 356 EYGIAAHWRYKETRGNNNSESAEVDQMAWMRQLLDWQKEA 395
>gi|94986614|ref|YP_594547.1| guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
gi|94730863|emb|CAJ54226.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
Length = 731
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 208/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H + A +L+ +G ++ + A LLHDT++D S + I FG VAD+V
Sbjct: 48 LRLSGEPYLSHPLAVAEMLSEMGFDAYAIMAALLHDTVEDTKCSLEDIETEFGKQVADIV 107
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+K+S +S ++E +A+ M LAM+ D R ++KLADRLHNM TL+
Sbjct: 108 NGVTKISMMSFESKEEQ------QAENFRKMILAMSQDIRVPIVKLADRLHNMRTLNFQK 161
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
KRQ A+ET++I+ PLANRLG+ K++LE+L FK+L+PD +T++S+ + +
Sbjct: 162 PHKRQSIAQETMDIYAPLANRLGLHRIKLELEDLSFKYLHPDIYTQISTWMHSNRVVERN 221
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ I K+ +A+ KN + GR K +YSIH KM+++ LT+D +HDI R+IV+
Sbjct: 222 LIERIISKI-KAILHKNGLKGTVQGRVKHVYSIHKKMVEQHLTLDSMHDILAFRVIVDTI 280
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L ++H W + G+ KDYI+ PK NGYQSLHT V G +E+QIRT EMH
Sbjct: 281 SDCYAVLGLLHSQWKPLHGRFKDYISMPKVNGYQSLHTTVMGPEGERIEIQIRTNEMHKL 340
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
AE G A+HW YKE + + + EW R VL Q
Sbjct: 341 AEQGVASHWLYKERNHSVNLSDVPQFEWLREVLDRQ 376
>gi|442555432|ref|YP_007365257.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Lawsonia
intracellularis N343]
gi|441492879|gb|AGC49573.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Lawsonia
intracellularis N343]
Length = 733
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 208/336 (61%), Gaps = 10/336 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H + A +L+ +G ++ + A LLHDT++D S + I FG VAD+V
Sbjct: 50 LRLSGEPYLSHPLAVAEMLSEMGFDAYAIMAALLHDTVEDTKCSLEDIETEFGKQVADIV 109
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+K+S +S ++E +A+ M LAM+ D R ++KLADRLHNM TL+
Sbjct: 110 NGVTKISMMSFESKEEQ------QAENFRKMILAMSQDIRVPIVKLADRLHNMRTLNFQK 163
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEA 177
KRQ A+ET++I+ PLANRLG+ K++LE+L FK+L+PD +T++S+ + +
Sbjct: 164 PHKRQSIAQETMDIYAPLANRLGLHRIKLELEDLSFKYLHPDIYTQISTWMHSNRVVERN 223
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ I K+ +A+ KN + GR K +YSIH KM+++ LT+D +HDI R+IV+
Sbjct: 224 LIERIISKI-KAILHKNGLKGTVQGRVKHVYSIHKKMVEQHLTLDSMHDILAFRVIVDTI 282
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L ++H W + G+ KDYI+ PK NGYQSLHT V G +E+QIRT EMH
Sbjct: 283 SDCYAVLGLLHSQWKPLHGRFKDYISMPKVNGYQSLHTTVMGPEGERIEIQIRTNEMHKL 342
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 333
AE G A+HW YKE + + + EW R VL Q
Sbjct: 343 AEQGVASHWLYKERNHSVNLSDVPQFEWLREVLDRQ 378
>gi|456966424|gb|EMG08042.1| RelA/SpoT domain protein, partial [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 385
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 206/344 (59%), Gaps = 19/344 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V+ AGLLHD ++D S + + R FG + DLV
Sbjct: 44 FRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDITDLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ ++E T A+ + + +A + D R +LIKLAD+ HN+ TL P
Sbjct: 104 EGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIKLADKTHNLRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL------VEC 173
K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++ E+ + E
Sbjct: 158 PEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQEVKKNINSKKSEREG 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
F E + +++L + + ++ GR K YSI+ KM K+ T +EI D+ +R+I
Sbjct: 218 FIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKEKTFNEIFDLRAIRII 272
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT++
Sbjct: 273 TNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRD 332
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAM 337
M+ AE+G AAHW YKEG S ++ V+W + +WQ A+
Sbjct: 333 MNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQDSAL 375
>gi|209522975|ref|ZP_03271532.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
gi|209496562|gb|EDZ96860.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
Length = 764
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 12/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +L +G+++ +VAAG LHD ++D ++ + + FG V LVE
Sbjct: 61 RKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDIIEDTDVTPEELESHFGPEVRHLVE 120
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+ N + + +A+ MFLAMA D R +++KLADRLHNM TL+ +
Sbjct: 121 GVTKLSKF------NFSNTTERQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEFMSE 174
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A ET EIF PLANRLGI K +LE+L FK++ P+ + E+ ++ + E
Sbjct: 175 SKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEAYREIQIRVADRRATREEK 234
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + + L ++ I + GR K LY I+ KM ++ EI+DI LRLIVE E
Sbjct: 235 LAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQFHEIYDIAALRLIVETNE 294
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH A
Sbjct: 295 ECYRALAIVHDSYRPIPGRFKDYIGLPKPNRYQSLHTGVIGNTGRPVEVQIRTVEMHHIA 354
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
E+G AAHW+YKE + + E W R +L WQ +
Sbjct: 355 EYGIAAHWKYKETGGSEFGKLTETDEKFTWLRQLLEWQSD 394
>gi|254456187|ref|ZP_05069616.1| RelA/SpoT family protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207083189|gb|EDZ60615.1| RelA/SpoT family protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 581
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 209/330 (63%), Gaps = 12/330 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDPY +H +E A +L + +S + GLLHDT++D F +YD I FG VA+LV+
Sbjct: 39 RASGDPYSVHPIEVANILTDLKLDSATITTGLLHDTIEDTFATYDTIKTEFGDEVAELVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+S NTA + + + LA + D R +L+K+ADRLHNM T+ A+P
Sbjct: 99 GVTKISVFE------NTAGANSKVENFRKLILATSKDIRVLLVKIADRLHNMRTIKAIPK 152
Query: 121 -CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC-FDEAM 178
KR+R A+ET+EI+ PLA+R+G+ + +LE+L F+ LN D + +L E D+
Sbjct: 153 EDKRKRIAQETMEIYAPLADRMGMHRIRDELEDLSFEILNNDARKLIKIRLDEIKLDKKD 212
Query: 179 VTSAIE-KLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + +L + L D +I+ + GR K+ +SI K+ KK+++++++ DI G R+I++N
Sbjct: 213 IFEELSFELSEILNDNHIN-AEIYGREKTPFSIWRKVQKKRVSLEQVTDIIGFRIILKNI 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY+ L + H+ W +PGK KDYI+ PK NGY+S+HT V G P+E+QIRT EMH
Sbjct: 272 DDCYKTLGIFHKKWNCIPGKFKDYISSPKINGYKSIHTAVIGSNKKPIEIQIRTNEMHEF 331
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWAR 327
AE G A+HW+YK + + +S + +W +
Sbjct: 332 AERGVASHWQYKSSE-RFNSLSWKEYDWLK 360
>gi|255022101|ref|ZP_05294105.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Acidithiobacillus caldus ATCC 51756]
gi|340782710|ref|YP_004749317.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Acidithiobacillus caldus SM-1]
gi|254968459|gb|EET26017.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Acidithiobacillus caldus ATCC 51756]
gi|340556861|gb|AEK58615.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Acidithiobacillus caldus SM-1]
Length = 733
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 203/339 (59%), Gaps = 13/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +LA + + V A LLHD ++D +S + I FGA VA+LV+
Sbjct: 50 RRSGEPYIHHPVAVACILAELRLDIASVQAALLHDVIEDCGVSKEEIAERFGAEVAELVD 109
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL Q+ RE +A+ MFLAM+ D R VLIKLADRLHNM T+ +
Sbjct: 110 GVSKLGQVRFETREE------AQAENFRKMFLAMSRDIRVVLIKLADRLHNMRTMGVMSA 163
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KR+R ++ETL+I+ P+A RLGI +++LE L F HL P + LS +
Sbjct: 164 EKRRRISRETLDIYAPIAQRLGIQAIRIELEELAFSHLYPKRWHALSDAIKAA--RGNRK 221
Query: 181 SAIEKLEQALKDKNISFLVL---CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
A++K+EQ + ++ ++ GR K +YSI+ KM K L IHD++ R+IV++
Sbjct: 222 EAVQKIEQIIAERLRQEAIVGEVSGREKHVYSIYRKMQAKGLPFSAIHDLHAFRIIVKDV 281
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+ L +VH L+ +PG+ KDYI PK NGYQSLHTV+ G P+E+QIRT++MH
Sbjct: 282 DTCYRVLGIVHSLFRPLPGRFKDYIAIPKSNGYQSLHTVLLGPFGHPVEIQIRTEDMHRV 341
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE G AAHW YK G Q++ Q W + +L Q +
Sbjct: 342 AEAGVAAHWLYKSG-AQNAHAEAQARAWLQRLLELQAQG 379
>gi|357057600|ref|ZP_09118458.1| hypothetical protein HMPREF9334_00175 [Selenomonas infelix ATCC
43532]
gi|355374848|gb|EHG22139.1| hypothetical protein HMPREF9334_00175 [Selenomonas infelix ATCC
43532]
Length = 743
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 208/340 (61%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGD Y++H + A +L + + + A LLHD ++D + + + FG + +L+
Sbjct: 45 VRISGDAYIVHPLNVAYILTGLHLDDETICAALLHDVVEDTCATLEEMDAEFGRNIMELI 104
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 105 DGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMR 158
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
KRQR AKET+E++ PLANRLGIS+ KV+LE+LC ++L P+ + L ++ E
Sbjct: 159 EDKRQRIAKETIEVYAPLANRLGISSIKVELEDLCLRYLEPEAYYALVEEVKHKRQERQE 218
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +I ++ + L+ I + GR K YSI+ KM + ++ EI+D+ +R++V +
Sbjct: 219 FIRESIRQIREKLEAAGIEAEI-KGRAKHFYSIYRKMKRDNKSVSEIYDLSAVRVLVSSV 277
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G PLE+QIRTK MH
Sbjct: 278 KDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHG-DPLEIQIRTKAMHQV 336
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 335
+EFG AAHW+YKE + Q + W R +++ Q E
Sbjct: 337 SEFGVAAHWKYKEAGRSIGATDENDQKMSWLRQMVSLQKE 376
>gi|260437936|ref|ZP_05791752.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
gi|292809687|gb|EFF68892.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
Length = 762
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 213/341 (62%), Gaps = 19/341 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + + AG+LHD ++D ++Y+ I R FG VA LV+
Sbjct: 64 RKSGEPYIIHPLCVAIILAQLELDKETIIAGILHDVIEDTEVTYEDISREFGEEVALLVD 123
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+QL+ E++ ++A+ L MFLAMA D R +LIKLADRLHNM T+
Sbjct: 124 GVTKLTQLN---YEHDKIE--IQAENLRKMFLAMAKDIRVILIKLADRLHNMRTMQYQKP 178
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
K+ ++ET+EI+ P+A RLGIS KV+L++L +L PD + +L L + E
Sbjct: 179 EKQIEKSRETMEIYSPIAQRLGISKIKVELDDLSLMYLQPDVYHKLEHDLTLGKEARENF 238
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++++ L I++ + GR K +SI+ KM+ + T+D+I+D++ +R+IV+ +
Sbjct: 239 VKEIVAEVKEKLSTTGINY-TIDGRVKHFFSIYKKMVNQDKTLDQIYDLFAVRIIVDTIK 297
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H+++ +PG+ KDYI PK N YQSLHT + + P E+QIRT EMH A
Sbjct: 298 DCYAVLGLIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLISQTGQPFEIQIRTYEMHRTA 357
Query: 299 EFGFAAHWRYKE------GDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW+YKE GD + + W R +L WQ
Sbjct: 358 EYGIAAHWKYKENIDGTKGDDSEEA----KLTWLRQILEWQ 394
>gi|194476820|ref|YP_002048999.1| metal dependent phosphohydrolase [Paulinella chromatophora]
gi|171191827|gb|ACB42789.1| metal dependent phosphohydrolase [Paulinella chromatophora]
Length = 573
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 211/334 (63%), Gaps = 16/334 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RA+G+PY++H + A +L GA+ V+ AGLLHD ++D ++ +I FG+ V LV
Sbjct: 66 FRATGEPYIIHPLAVANILYMAGASPAVIMAGLLHDIIEDTIINAKHIEINFGSEVGLLV 125
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGV+KL K+ N+T ++ A+ +H +FL+MA D R VL+KLADRLHNM T+ +L
Sbjct: 126 EGVTKLG---KIHYTNHTEAR---AENMHRLFLSMANDIRVVLVKLADRLHNMRTIASLD 179
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEA 177
+ K++ A+ET + ++PLANRLGI ++ +LE+L FK L P+ ++ S + E
Sbjct: 180 VTKQRTIARETRDFYIPLANRLGIGYFQWELEDLAFKILEPEVFLKIQSNIAVNRSEREF 239
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L + LK+ + + GR K LY + CKM ++ DEI+DI G+R+I
Sbjct: 240 RINEIVKLLYKHLKNTGLENFSVNGRTKHLYGLWCKMQCQQRAFDEIYDIAGIRIITPTV 299
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E CY+AL +++++ V G+ KDYI PK NGYQSLHT V G + +E+QIRT EMH
Sbjct: 300 EGCYRALATIYEIFCPVFGRFKDYIGLPKANGYQSLHTAVIGTHRL-IEIQIRTNEMHQM 358
Query: 298 AEFGFAAHWRYKEG------DCQHSSFVLQMVEW 325
AE+G A+HWRYKEG + ++ +++ Q V+W
Sbjct: 359 AEYGIASHWRYKEGGSPANIESKYFNWLYQFVDW 392
>gi|226356444|ref|YP_002786184.1| GTP diphosphokinase [Deinococcus deserti VCD115]
gi|226318434|gb|ACO46430.1| putative GTP diphosphokinase (ppGpp synthetase I) (RelA/SpoT) (GTP
pyrophosphokinase) [Deinococcus deserti VCD115]
Length = 760
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 212/344 (61%), Gaps = 34/344 (9%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYDYIFRTFGAGVADLV 60
R SG+PY+ H V A++LA +G ++ V AGLLHDT++D ++++ I FG V +V
Sbjct: 35 RKSGEPYITHPVAVAVILARLGMDTESVMAGLLHDTVEDVEGVTFESIEELFGPDVRRIV 94
Query: 61 EGVSKLSQLSKLARENNTASKT---VEADRLHTMFLAM-ADARAVLIKLADRLHNMMTLD 116
EG +K+S+LSK + + T ++A+ L M +AM AD R +++KLADRLHNM TL
Sbjct: 95 EGETKVSKLSKQGSQQAEVAHTGRDMQAENLRQMLIAMTADIRIIVVKLADRLHNMRTLG 154
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE 176
++ K+QR A+ET+EIF PLA+RLGI K +LE+L F++L PD + L S+L +E
Sbjct: 155 SMKPEKQQRIARETMEIFAPLAHRLGIGKIKWELEDLSFQYLQPDDYAYLQSRLRTRQEE 214
Query: 177 --AMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 229
A++ A+++L +AL+D + + + + GR K L+SIH KM ++ +++I D+
Sbjct: 215 RDALIQGAVKQLREALEDDLELPEWVGEIDIAGRSKHLWSIHTKMKREGKALEQIFDLLA 274
Query: 230 LRLIVENEE----------------------DCYQALRVVHQLWAEVPGKMKDYITRPKF 267
+R+I+ ++ CY + +VH +W +PG+ KDYI PK
Sbjct: 275 IRVILTPKDLIVPPGTDEKRRERAEETREKRICYHTVSIVHSMWTPLPGRFKDYIAVPKP 334
Query: 268 NGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 311
NGYQSLHT V + P+EVQIR++ MH AE+G AAHW YK+G
Sbjct: 335 NGYQSLHTTVISQSGQPIEVQIRSRRMHEVAEYGVAAHWMYKQG 378
>gi|225175541|ref|ZP_03729535.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiobacter alkaliphilus AHT 1]
gi|225168870|gb|EEG77670.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiobacter alkaliphilus AHT 1]
Length = 721
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 150/344 (43%), Positives = 209/344 (60%), Gaps = 12/344 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H + + +LA + + + AGLLHD ++D ++ + I FG +A LV+
Sbjct: 39 RFSGELYITHPLGVSHILAELEMDMDTIVAGLLHDVVEDTEVTLEDIEEKFGEEIAMLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+L ++E + +A+ L MF+AMA D R +LIKLADR HNM TL L
Sbjct: 99 GVTKLSKLEYKSKEEH------QAENLRKMFIAMAKDIRVLLIKLADRTHNMRTLKYLTS 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K+Q ++ETLEI+ PLA+RLGI K +LE+L F+ L D++ L KL + E
Sbjct: 153 IKQQAISRETLEIYAPLAHRLGIYKIKWELEDLAFRFLERDRYYALVDKLAKKRQEREQF 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++ LE L+D I + GR K LYSI KM ++ EI+D+ +R+IV++ +
Sbjct: 213 IGQIMDTLEPKLEDVGIQAHI-SGRPKHLYSISQKMKEQGKEFHEIYDLTAIRIIVDSLK 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL +VH LW +PG+ KDYI PK N YQSLHT+V LEVQIRT EMH A
Sbjct: 272 DCYGALGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTLVMVGKNELLEVQIRTWEMHRTA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 342
EFG AAHWRYKEGD + + + W R ++ Q + SKD S
Sbjct: 332 EFGIAAHWRYKEGDIRDDDSIDNKLTWLRQIMELQQD--SKDAS 373
>gi|271502621|ref|YP_003335647.1| (p)ppGpp synthetase I SpoT/RelA [Dickeya dadantii Ech586]
gi|270346176|gb|ACZ78941.1| (p)ppGpp synthetase I, SpoT/RelA [Dickeya dadantii Ech586]
Length = 700
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 202/340 (59%), Gaps = 10/340 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY+ H V A +LA + + + A LLHD ++D +Y + + FG VA+LVE
Sbjct: 39 RSSGEPYITHPVAVACILAEMRLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVE 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +L + K +A+ M +AM D R +LIKLADR HNM TL +L
Sbjct: 99 GVSKLDKLQFRDK------KEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ + K + M
Sbjct: 153 DKRRRIARETLEIYSPLAHRLGIHHLKTELEELGFEALYPNRYRVIKEVVKAARGNRKEM 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + ++E LK+ IS V GR K LYSI+CKM K+ I DIY R+IV +
Sbjct: 213 IQKILSEIEGRLKEAGISCRV-SGREKHLYSIYCKMHLKEQRFHSIMDIYAFRVIVREVD 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY+ L VH L+ PG++KDYI PK NGYQSLHT + G VP+EVQIRT++M A
Sbjct: 272 TCYRVLGQVHSLYKPRPGRVKDYIAIPKANGYQSLHTSLIGPHGVPVEVQIRTEDMDQMA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
E G AAHW YKEG+ ++ ++ W + +L Q A S
Sbjct: 332 EMGVAAHWAYKEGESSSTTAQVRAQRWMQSLLELQQSAGS 371
>gi|326329825|ref|ZP_08196145.1| GTP diphosphokinase [Nocardioidaceae bacterium Broad-1]
gi|325952411|gb|EGD44431.1| GTP diphosphokinase [Nocardioidaceae bacterium Broad-1]
Length = 771
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 203/342 (59%), Gaps = 17/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SGDPY+ H + +LA +G + A LLHDT++D + + R FG VA LV
Sbjct: 82 MRKSGDPYITHPLAVTTILAELGMTEPTLVAALLHDTVEDTPYTLKELTRDFGEEVAHLV 141
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ T + +A+ + M +AM+ D R ++IKLADRLHNM TL +P
Sbjct: 142 DGVTKLDKV--------TYGDSAQAETIRKMVVAMSRDIRVLVIKLADRLHNMRTLRYVP 193
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD---E 176
++R A+ETL+I+ PLA+RLG++T K +LE+L F L P + EL +LV + E
Sbjct: 194 QKSQERSARETLDIYAPLAHRLGMNTIKFELEDLAFATLYPKMYDELV-RLVADRNPSRE 252
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I+++E+ L D I V GR K YSI+ KM+ +I+D+ G+R++VE+
Sbjct: 253 KFLAQVIDQVERDLHDARIKATV-TGRPKHYYSIYQKMIVGGKDFSDINDLVGIRILVED 311
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
E DCY L ++H W V G+ KDYI PKFN YQSLHT V G P+E+QIRT MH
Sbjct: 312 ERDCYSVLGILHSRWNPVLGRFKDYIAMPKFNMYQSLHTTVIGPQGKPVELQIRTFAMHR 371
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQM---VEWARWVLTWQCE 335
+AEFG AAHW+YKE M + W + ++ WQ E
Sbjct: 372 RAEFGVAAHWKYKEDGRNGVDTDRPMDNDMSWVKQLMDWQSE 413
>gi|390629433|ref|ZP_10257428.1| GTP diphosphokinase [Weissella confusa LBAE C39-2]
gi|390485337|emb|CCF29776.1| GTP diphosphokinase [Weissella confusa LBAE C39-2]
Length = 744
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 199/314 (63%), Gaps = 9/314 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + V AG LHD ++D + + + R FG VA +V+
Sbjct: 44 RKSGEPYIIHPIQVAGILADLHMDPDTVVAGYLHDVVEDTEATLEDVEREFGHDVAVIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKLS++ +S+ A+ + LAM+ D R +++KLADRLHNM TL AL
Sbjct: 104 GVSKLSKIEY------KSSREQLAENHRKLLLAMSHDIRVIIVKLADRLHNMRTLSALRE 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++R A ETLEI+ PLA+RLGI T K +LE++ ++L P+ + +++ + E +
Sbjct: 158 EKQKRIASETLEIYAPLADRLGIMTIKWELEDMSLRYLEPEAYHDIAKSMQLRRQERLEI 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V A+ +EQA+ + ++ + GR K +YSI+ KM+ KK DEI+D+ +R++V+
Sbjct: 218 VDQAVNDIEQAITELHLQHAEVYGRPKHIYSIYRKMVDKKKKFDEIYDLLAIRVLVDTIP 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+ Y L +H W +PG+ KDYI PK NGYQSLHT V G G PLEVQIRT +MH A
Sbjct: 278 ETYAVLGAIHARWTPMPGRFKDYIALPKANGYQSLHTSVIGPGGRPLEVQIRTYQMHEVA 337
Query: 299 EFGFAAHWRYKEGD 312
EFG AAHW YKEG+
Sbjct: 338 EFGVAAHWAYKEGN 351
>gi|242280235|ref|YP_002992364.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio salexigens DSM 2638]
gi|242123129|gb|ACS80825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio salexigens DSM
2638]
Length = 723
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 206/341 (60%), Gaps = 14/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H + A LLA + + VAAGLLHDT++D + D I FG VAD+V
Sbjct: 38 VRLSGEPYLAHPLHVAKLLADMRLDEPTVAAGLLHDTVEDTDTTIDEIADLFGEEVADIV 97
Query: 61 EGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+K+S + + SK + +A+ + M LAMA D R +++KLADRLHNM TLD
Sbjct: 98 DGVTKISMM-------DFESKAIAKAENIRKMILAMAEDIRVLMVKLADRLHNMRTLDFQ 150
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDE 176
K+ A+ET++I+ PLANRLG+ K LE+LC +L PD + +++ L +
Sbjct: 151 KSYKQLLIAQETMDIYSPLANRLGLYMVKRDLEDLCLYYLKPDVYQDITDGLERQHTIGK 210
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
V + I L L + I + GR K +YSIH KM ++ L++D+++DI R+IVE+
Sbjct: 211 EYVDNVIGLLNGILDNNEIKGTIY-GRTKHIYSIHKKMQRQNLSLDQVYDIIAFRVIVES 269
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY L +VH +W + GK KDYI+ PK N YQSLHT V G +E+QIRT+EM
Sbjct: 270 VKDCYSVLGLVHSMWKPISGKFKDYISIPKANMYQSLHTTVIGPEGERIEIQIRTEEMQQ 329
Query: 297 QAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE S + + W R ++ WQ E
Sbjct: 330 VAEYGVAAHWQYKESGRSDSKQNRDAERFSWLRQIMDWQRE 370
>gi|307128796|ref|YP_003880812.1| GTP pyrophosphokinase/Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Dickeya dadantii 3937]
gi|306526325|gb|ADM96255.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Dickeya dadantii 3937]
Length = 700
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 201/340 (59%), Gaps = 10/340 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY+ H V A +LA + + + A LLHD ++D +Y + + FG VA+LVE
Sbjct: 39 RSSGEPYITHPVAVACILAEMRLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVE 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +L K +A+ M +AM D R +LIKLADR HNM TL +L
Sbjct: 99 GVSKLDKL------KFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ + K + M
Sbjct: 153 DKRRRIARETLEIYSPLAHRLGIHHLKTELEELGFEALYPNRYRVIKEVVKAARGNRKEM 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + ++E LK+ IS V GR K LYSI+CKM K+ I DIY R+IV +
Sbjct: 213 IQKILSEIEGRLKEAGISCRV-SGREKHLYSIYCKMHLKEQRFHSIMDIYAFRVIVREVD 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY+ L VH L+ PG++KDYI PK NGYQSLHT + G VP+EVQIRT++M A
Sbjct: 272 TCYRVLGQVHSLYKPRPGRVKDYIAIPKANGYQSLHTSLIGPHGVPVEVQIRTEDMDQMA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
E G AAHW YKEG+ ++ ++ W + +L Q A S
Sbjct: 332 EMGVAAHWAYKEGESSSTTAQVRAQRWMQSLLELQQSAGS 371
>gi|383824393|ref|ZP_09979576.1| GTP pyrophosphokinase RelA [Mycobacterium xenopi RIVM700367]
gi|383337406|gb|EID15783.1| GTP pyrophosphokinase RelA [Mycobacterium xenopi RIVM700367]
Length = 787
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 207/354 (58%), Gaps = 36/354 (10%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FG V +LV
Sbjct: 95 LRHSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYTLEQLSAEFGEEVGNLV 154
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 155 DGVTKLDRV--------VLGSAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 206
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL-----------SS 168
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ +
Sbjct: 207 PEKQVRKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEIVRLVADRAPSRDT 266
Query: 169 KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIY 228
L + DE + T K+ ++ GR K +SI+ KM+ K D+IHD+
Sbjct: 267 YLAKVRDEIVATLKASKINATVE----------GRPKHYWSIYQKMIVKGRDFDDIHDLV 316
Query: 229 GLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQ 288
G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQ
Sbjct: 317 GIRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQ 376
Query: 289 IRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
IRT++MH AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 377 IRTRDMHRTAEYGIAAHWRYKEAKGRNGLPHPHAAAEIDDMAWMRQLLDWQREA 430
>gi|251791701|ref|YP_003006422.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Dickeya zeae
Ech1591]
gi|247540322|gb|ACT08943.1| (p)ppGpp synthetase I, SpoT/RelA [Dickeya zeae Ech1591]
Length = 700
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 202/340 (59%), Gaps = 10/340 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY+ H V A +LA + + + A LLHD ++D +Y + + FG VA+LVE
Sbjct: 39 RSSGEPYITHPVAVACILAEMRLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVE 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +L + K +A+ M +AM D R +LIKLADR HNM TL +L
Sbjct: 99 GVSKLDKLKFRDK------KEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ + K + M
Sbjct: 153 DKRRRIARETLEIYSPLAHRLGIHHLKTELEELGFEALYPNRYRVIKEVVKAARGNRKEM 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + ++E LK+ IS V GR K LYSI+CKM K+ I DIY R+IV +
Sbjct: 213 IQKILSEIEGRLKEAGISCRV-SGREKHLYSIYCKMHLKEQRFHSIMDIYAFRVIVREVD 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY+ L VH L+ PG++KDYI PK NGYQSLHT + G VP+EVQIRT++M A
Sbjct: 272 TCYRVLGQVHSLYKPRPGRVKDYIAIPKANGYQSLHTSLIGPHGVPVEVQIRTEDMDQMA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
E G AAHW YKEG+ ++ ++ W + +L Q A S
Sbjct: 332 EMGVAAHWAYKEGESSSTTAQVRAQRWMQSLLELQQSAGS 371
>gi|452850965|ref|YP_007492649.1| GTP pyrophosphokinase [Desulfovibrio piezophilus]
gi|451894619|emb|CCH47498.1| GTP pyrophosphokinase [Desulfovibrio piezophilus]
Length = 724
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 209/344 (60%), Gaps = 25/344 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A LLA + + VAAGLLHDT++D + D I FG+ VAD+V
Sbjct: 38 VRRSGEPYISHPMNVANLLADMQLDEATVAAGLLHDTVEDTDTTVDEIEELFGSDVADIV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+K+S++ + SK V+ A+ + + LAMA D R +++KLADRLHNM TL +
Sbjct: 98 DGVTKISKM-------DFESKAVQQAENIRKLILAMAEDIRVLMVKLADRLHNMRTLQYM 150
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
K++ A+ET +I+ PLANRLG+ K +LE+LC ++L PD +L+ + E E
Sbjct: 151 KPVKQRLIAQETQDIYAPLANRLGLHRVKTELEDLCLRYLKPDVFEQLTDAVSEHRAAGE 210
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I+ ++ L I V GR K +SIH KM ++ LT DEI+D+ R+IV++
Sbjct: 211 PYIDKVIDLIQNMLNKNKIKGRVY-GRTKHFHSIHVKMEQQGLTFDEIYDLIAFRIIVDS 269
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+DCY L ++H W VPG+ KDYI+ PK N YQSLH+ V G +EVQIRT EM+
Sbjct: 270 LKDCYSVLGLIHAAWRPVPGRFKDYISIPKANMYQSLHSTVIGPDGERIEVQIRTDEMNQ 329
Query: 297 QAEFGFAAHWRYKE-------------GDCQHSSFVLQMVEWAR 327
AE+G AAHW+YKE D + +++ Q+++W R
Sbjct: 330 IAEYGVAAHWQYKEVGKGIKKGKTAGTRDAERYTWLKQIMDWQR 373
>gi|312880418|ref|ZP_07740218.1| (p)ppGpp synthetase I, SpoT/RelA [Aminomonas paucivorans DSM 12260]
gi|310783709|gb|EFQ24107.1| (p)ppGpp synthetase I, SpoT/RelA [Aminomonas paucivorans DSM 12260]
Length = 760
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 208/338 (61%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A +LA + + ++A LLHD L+D + + FG V LV+
Sbjct: 84 RHSGEPYVVHTISVASILADMELDVETLSAALLHDVLEDTPVGDAVLKERFGPEVLTLVD 143
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L + E+ +A+ L MFL MA D R VLIKLADRLHNM TL A
Sbjct: 144 GVTKLGKLPFKSIED------YQAENLRKMFLVMAKDIRVVLIKLADRLHNMRTLQAHRR 197
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
++ AKETLEI+ PLA+RLGI K +LE+L FK L+P+ + E+ ++ + E A+
Sbjct: 198 DRQLAIAKETLEIYAPLAHRLGIYQVKRELEDLSFKILDPEIYYEIRRRVRKKLPEREAI 257
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A++ L+Q L ++ + L GR K YSI+ KM +K L++D+++D+ LR++V
Sbjct: 258 IKQALDILQQRLLEEGVE-ASLNGRPKHFYSIYEKMRRKNLSLDQLYDLLALRVVVGGLA 316
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CYQ L +VH +W +PG+ DYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 317 ECYQVLGLVHTIWKPIPGQFDDYIANPKSNMYQSLHTTVLGPSGEPLEVQIRTWEMHRLA 376
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW YKEG Q + + + + W R VL Q +
Sbjct: 377 EYGIAAHWHYKEGK-QRVNQLDRRLTWIRQVLESQQDG 413
>gi|306836233|ref|ZP_07469216.1| GTP diphosphokinase [Corynebacterium accolens ATCC 49726]
gi|304567887|gb|EFM43469.1| GTP diphosphokinase [Corynebacterium accolens ATCC 49726]
Length = 764
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 210/343 (61%), Gaps = 18/343 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H + A + A IG ++T + A LLHDT++D + + + R FG VA LV
Sbjct: 71 FRKSGEPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTDYTLEDLTRDFGPEVARLV 130
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AMA D R ++IK++DRLHNM T+ LP
Sbjct: 131 DGVTKLDKVALGA--------AAEAETIRKMIVAMANDPRVLVIKVSDRLHNMRTMRFLP 182
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE---CFDE 176
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + E D
Sbjct: 183 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEIVRMVAERAPSRDR 242
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A+ I ++ ALK+ I V+ GR K +SI+ KM+ + EI D+ G+R++V++
Sbjct: 243 AL-KEIINQVSAALKENGIEAEVM-GRPKHYWSIYQKMVVRGREFAEIFDLVGIRVLVDD 300
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
CY A+ VVH ++ +PG+ KDYI+ P+F YQSLHT V +G LEVQ+RT EMH
Sbjct: 301 INSCYAAIGVVHSIYQALPGRFKDYISSPRFGVYQSLHTTVLADGGATLEVQVRTHEMHY 360
Query: 297 QAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE + H V QM W R +L WQ EA
Sbjct: 361 NAEFGVAAHWRYKETKGKNSGHQEEVDQMA-WMRQLLDWQKEA 402
>gi|407477775|ref|YP_006791652.1| GTP pyrophosphokinase [Exiguobacterium antarcticum B7]
gi|407061854|gb|AFS71044.1| GTP pyrophosphokinase [Exiguobacterium antarcticum B7]
Length = 732
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/319 (44%), Positives = 204/319 (63%), Gaps = 10/319 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H V+ A +L IG ++T + A LLHD ++D ++ + + FGA V LV
Sbjct: 43 FRRSGEPYIIHPVQVAGILVDIGLDATTIVAALLHDVVEDTDITLEELTERFGADVTMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++ A + MF+AMA D R +LIKLADRLHNM TL +
Sbjct: 103 DGVTKLGKIKYKSKREELA------ENHRKMFIAMAEDIRVILIKLADRLHNMRTLQHMV 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K+ + A+ETLEIF PLA+RLGIST K +LE++ +++NP Q+ + S K EA
Sbjct: 157 KEKQVQKAEETLEIFAPLAHRLGISTIKWELEDISLRYINPQQYYRIVSMMKQKRTEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+VTS I+++ + L++ I+ V GR K +YSI+ KM K EI+D+ +R+IV++
Sbjct: 217 LVTSVIDEVNEVLEEVEIAADV-DGRPKHIYSIYNKMQNSKKEFSEIYDLMAVRIIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L ++H + +PG+ KDYI PK N YQSLHT V G PLEVQIRT++MH
Sbjct: 276 KDCYAVLGIIHTQYKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTRDMHFI 335
Query: 298 AEFGFAAHWRYKEGDCQHS 316
AE+G AAHW YKEG Q +
Sbjct: 336 AEYGIAAHWAYKEGKEQEA 354
>gi|108804177|ref|YP_644114.1| (p)ppGpp synthetase I SpoT/RelA [Rubrobacter xylanophilus DSM 9941]
gi|108765420|gb|ABG04302.1| (p)ppGpp synthetase I, SpoT/RelA [Rubrobacter xylanophilus DSM
9941]
Length = 742
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 214/341 (62%), Gaps = 14/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+P++LH + TA +LA + + T +AA LLHD L+D ++ + + FGA VA++V+
Sbjct: 56 RRSGEPFILHPLATADILADLRMDPTTIAAALLHDVLEDTGVTKEELAGRFGAEVAEIVD 115
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L E +A+ L M +AM+ D R ++IKLADRLHNM TL+ L
Sbjct: 116 GVTKLKRLPSGNLEE------AQAESLRKMIVAMSRDVRVIIIKLADRLHNMRTLEYLKR 169
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
+ A ETLEI+ PLA+RLGI + K +LE+L F L+P ++ E+ + DE A
Sbjct: 170 ETQLEKATETLEIYAPLAHRLGIYSLKWELEDLAFATLHPRRYEEIKRLVAARRDEREAF 229
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+++ +L++ L + I V GR K YSI+ KM+++ +EI+D+ GLR+IV +
Sbjct: 230 ISARAAELKRYLSEAGIEAEVR-GRVKHFYSIYNKMVRRNKEFNEIYDLAGLRVIVGSVR 288
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT-VVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL V+H +W +PG+ KDYI PKFN YQSLHT V++ EG + LE+QIRT+EM
Sbjct: 289 DCYGALGVIHSVWKPIPGRFKDYIAMPKFNMYQSLHTTVMSNEGKL-LEIQIRTEEMDRT 347
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
AE+G AAHW YKEG ++ + W + ++ WQ E S
Sbjct: 348 AEYGIAAHWMYKEGVGENGR--ADRLAWLKSMMEWQQETSS 386
>gi|325568309|ref|ZP_08144676.1| GTP diphosphokinase [Enterococcus casseliflavus ATCC 12755]
gi|420264623|ref|ZP_14767252.1| GTP diphosphokinase [Enterococcus sp. C1]
gi|325158078|gb|EGC70231.1| GTP diphosphokinase [Enterococcus casseliflavus ATCC 12755]
gi|394767937|gb|EJF48167.1| GTP diphosphokinase [Enterococcus sp. C1]
Length = 736
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + + VA G LHD ++D ++ + FGA VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHDVVEDTDVTLADLKEEFGADVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M +AMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENHRKMLIAMAQDLRVIMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A+ET+EI+ PLA+RLGIS K +LE++ ++LNP Q+ + + +E +
Sbjct: 157 EDKQRRIAQETMEIYAPLAHRLGISRIKWELEDISLRYLNPQQYYRIVHLMQTKREERES 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V+ +E++ A ++ +I + + GR K +YSI+ KM +K +EI+D+ +R+IV++
Sbjct: 217 YVSETVEEIRIATEELDI-YAEIYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 276 KDCYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGNPVEIQIRTHEMHEI 335
Query: 298 AEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + Q V W R +L Q E+
Sbjct: 336 AEFGVAAHWAYKEGKTEKVRADKMTQQVGWFREILELQDES 376
>gi|407799653|ref|ZP_11146531.1| (p)ppGpp synthetase I SpoT/RelA [Oceaniovalibus guishaninsula
JLT2003]
gi|407058130|gb|EKE44088.1| (p)ppGpp synthetase I SpoT/RelA [Oceaniovalibus guishaninsula
JLT2003]
Length = 714
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 210/344 (61%), Gaps = 17/344 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY H V A +LA + + LLHDT++D SY+ + R FG +ADLV
Sbjct: 47 FRHSGEPYFTHPVAVAGILARQRLDDATIVTALLHDTVEDTRASYEDVERLFGTEIADLV 106
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KL+QL T++++ +A+ +F+AM+ D R +L+KLADRLHNM T++++
Sbjct: 107 NGVTKLTQLQL------TSTRSKQAENFRKLFIAMSRDLRVILVKLADRLHNMRTIESMR 160
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
+QR A+ET++IF PLA R+G+ + +LE+L FK LNPD + + ++ EA
Sbjct: 161 PEGQQRKARETMDIFAPLAGRMGMQWMREELEDLAFKVLNPDGRNSIIRRFIKLQREA-- 218
Query: 180 TSAIEKLEQALK---DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ I+K+ ++ D+ + GR K +SI KM +KK+ + DIYG R+IV
Sbjct: 219 GNVIDKITADIRLELDRAGIEGEVYGRAKKPFSIWRKMEEKKIGFSRLSDIYGFRIIVGT 278
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
E +CY L V+HQ W VP + KDYI++PK NGY+S+HT V+G +EVQIRT++MH
Sbjct: 279 ESECYAVLGVIHQRWRAVPDRFKDYISQPKSNGYRSIHTTVSGRDGKRVEVQIRTRQMHE 338
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWV--LTWQCEAMS 338
AE G AAHW Y++G + F V+ ARWV L+ Q E+ S
Sbjct: 339 VAEAGVAAHWSYRDGQRVENPFA---VDPARWVAMLSEQFESAS 379
>gi|406706298|ref|YP_006756651.1| RelA/SpoT family (p)ppGpp synthetase [alpha proteobacterium HIMB5]
gi|406652074|gb|AFS47474.1| (p)ppGpp synthetase, RelA/SpoT family [alpha proteobacterium HIMB5]
Length = 582
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 207/333 (62%), Gaps = 20/333 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASGDPY +H + A +L + +S +A GLLHDT++D + +Y+ I FG VADLVE
Sbjct: 39 RASGDPYSVHPIAVANILTELKLDSATIATGLLHDTIEDTYATYETIKNEFGEEVADLVE 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+S NTA+ +A+ + LA + D R +L+K+ADRLHNM T+DA+
Sbjct: 99 GVTKISVFE------NTAASNSKAENFRKLILATSKDIRVLLVKIADRLHNMRTIDAITK 152
Query: 121 C-KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--- 176
KR+R A+ET+EI+ PLA+R+G+ + +LE+L FK LN T + +KL E ++
Sbjct: 153 EEKRKRIAQETMEIYAPLADRMGMHRIRDELEDLSFKILNNQARTLIKNKLDEIKEDKKD 212
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
T +IE L + L D I + + GR K+ +SI K+ KK++++++I DI G R+I+
Sbjct: 213 TFETLSIE-LTELLNDHKI-YAEIYGREKTPFSIWRKVQKKRVSLEQITDIIGFRIILNT 270
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT-VVTGEGLVPLEVQIRTKEMH 295
+DCY+ L + H+ W VPGK KDYI+ PK NGY+S+HT VV G P+E+QIRT MH
Sbjct: 271 VDDCYKTLGIFHKKWNCVPGKFKDYISSPKINGYKSIHTSVVIGPNQKPIEIQIRTMSMH 330
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARW 328
AE G A+HW+YK SS V W +
Sbjct: 331 EFAERGIASHWQYK------SSEKFNSVSWKEY 357
>gi|449095202|ref|YP_007427693.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
gi|449029117|gb|AGE64356.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
Length = 734
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +A G LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++++ +++ NI GR K +YSI+ KM+ + +EI+D+ +R++V + +
Sbjct: 218 VDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
E+G AAHW YKEG + + W R +L +Q E+
Sbjct: 337 EYGVAAHWAYKEGKAATEGATFEKKLSWFREILEFQNES 375
>gi|372487190|ref|YP_005026755.1| RelA/SpoT family (p)ppGpp synthetase [Dechlorosoma suillum PS]
gi|359353743|gb|AEV24914.1| (p)ppGpp synthetase, RelA/SpoT family [Dechlorosoma suillum PS]
Length = 743
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 208/338 (61%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +A +ST + A LLHDT++D +S + + FG GVADLV+
Sbjct: 75 RLSGEPYITHPLAVAGAIAEWRLDSTAIIAALLHDTMEDTGISKEELTERFGKGVADLVD 134
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ ++ + +A+ M LAMA D R +LIKL DRLHNM TL +
Sbjct: 135 GLSKLDKI------EFSSYQEAQAENFRKMLLAMAKDLRVILIKLTDRLHNMQTLGCMRP 188
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
KR+R A ETLEI+ P+ANRLG++T +L++L FKH +P ++ L ++ +
Sbjct: 189 DKRRRIALETLEIYAPIANRLGLNTVYRELQDLSFKHTHPMRYQVLLKAVMAARGNRREV 248
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
++ ++ ++ ++D I V GR KSLYSI+ KM++K+L+ ++ DIYG R++V++
Sbjct: 249 LSKILDGVQSKMRDSGIEAQVF-GREKSLYSIYRKMVEKRLSFSQVLDIYGFRVVVKDVP 307
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY L +H L+ +PGK KDYI PK NGYQSLHT + G +P+EVQ+RT+EMH A
Sbjct: 308 SCYLGLGALHALYKPLPGKFKDYIAIPKANGYQSLHTTLIGPYGMPVEVQLRTEEMHHMA 367
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
+ G A+HW YK+ + + Q W + +L Q A
Sbjct: 368 QEGVASHWLYKDTEKSAAELQYQTHRWLQSLLELQSTA 405
>gi|226939389|ref|YP_002794462.1| SpoT [Laribacter hongkongensis HLHK9]
gi|226714315|gb|ACO73453.1| SpoT [Laribacter hongkongensis HLHK9]
Length = 724
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 206/337 (61%), Gaps = 10/337 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A +L ++ +AA LLHDT++D ++ + FG VA+LV+
Sbjct: 55 RKSGEPYITHPLSVAQILTEWKLDAHGLAAALLHDTMEDTGVAKSTLAEKFGKQVAELVD 114
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL +L ++E +A+ M LAMA D R ++IKLADRLHNM TLD++
Sbjct: 115 GLSKLERLEYQSKEAR------QAENFRKMVLAMARDIRVIIIKLADRLHNMRTLDSMRE 168
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
KR+R A ETL+++ PLANR+G++ +LE+LCFK+L P++++ L+ + +
Sbjct: 169 EKRRRIALETLDVYTPLANRIGLNKVYRELEDLCFKYLYPNRYSVLAKAVRAARGNRREL 228
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + + + L + NI + GR K+LYSI+ KM +K+L+ E+ DIY R+IV +
Sbjct: 229 VGKILTAIARKLVEANIEAGIR-GREKNLYSIYRKMQEKQLSFSEVLDIYAFRVIVNDIP 287
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY AL +H L+ +PGK KDYI PK NGYQSLHT + G P+EVQIRT++MH A
Sbjct: 288 SCYLALGALHSLYKPIPGKFKDYIAIPKSNGYQSLHTTLFGPYGTPIEVQIRTRDMHRVA 347
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E G A+HW YK GD + +W + +L Q E
Sbjct: 348 ESGVASHWMYKSGDASLDMARQRTHQWLQDILDIQAE 384
>gi|260426691|ref|ZP_05780670.1| GTP pyrophosphokinase [Citreicella sp. SE45]
gi|260421183|gb|EEX14434.1| GTP pyrophosphokinase [Citreicella sp. SE45]
Length = 712
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 206/341 (60%), Gaps = 15/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY H V A +L + + LLHDT++D S+ I FG VADLV
Sbjct: 38 LRHSGEPYFTHPVAVAAILTEQQLDDATIITALLHDTIEDTRASWKDIADRFGEDVADLV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+ L ++S+T +A+ +F+AM+ D R +L+KLADRLHNM T+ A+
Sbjct: 98 DGVTKLTNL------QLSSSETKQAENFRKLFMAMSKDLRVILVKLADRLHNMRTIKAMR 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA-- 177
K+ + A+ET++I+ PLA R+G+ + +LE+L F+ LNP+ + + + EA
Sbjct: 152 AEKQVQKARETMDIYAPLAGRMGMQWMREELEDLAFRVLNPEGRASIIRRFITLQKEAGD 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ + L++ I V GR K YSI KM +K L + DIYG R+I NE
Sbjct: 212 VIHRITGDMRHELEEAGIDAEVF-GRAKKPYSIWRKMQEKGLGFSRLSDIYGFRVITRNE 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY+AL V+HQ W VPG+ KDYI++PK NGY+S+HT V+G +EVQIRT++MH
Sbjct: 271 MDCYRALGVIHQRWRSVPGRFKDYISQPKSNGYRSIHTTVSGRDGKRVEVQIRTRQMHEV 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWV--LTWQCEA 336
AE G AAHW Y++G+ + F V+ ARW+ LT Q +A
Sbjct: 331 AETGVAAHWSYRDGERAENPFA---VDPARWIASLTEQFDA 368
>gi|257866975|ref|ZP_05646628.1| RelA/SpoT protein [Enterococcus casseliflavus EC30]
gi|257873309|ref|ZP_05652962.1| RelA/SpoT protein [Enterococcus casseliflavus EC10]
gi|257877051|ref|ZP_05656704.1| RelA/SpoT protein [Enterococcus casseliflavus EC20]
gi|257801031|gb|EEV29961.1| RelA/SpoT protein [Enterococcus casseliflavus EC30]
gi|257807473|gb|EEV36295.1| RelA/SpoT protein [Enterococcus casseliflavus EC10]
gi|257811217|gb|EEV40037.1| RelA/SpoT protein [Enterococcus casseliflavus EC20]
Length = 736
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 209/341 (61%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + + VA G LHD ++D ++ + FGA VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHDVVEDTDVTLADLKEEFGADVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M +AMA D R +++KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENHRKMLIAMAQDLRVIMVKLADRLHNMRTLKHLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A+ET+EI+ PLA+RLGIS K +LE++ ++LNP Q+ + + +E +
Sbjct: 157 EDKQRRIAQETMEIYAPLAHRLGISRIKWELEDISLRYLNPQQYYRIVHLMQTKREERES 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V+ +E++ A ++ +I + + GR K +YSI+ KM +K +EI+D+ +R+IV++
Sbjct: 217 YVSETVEEIRIATEELDI-YAEIYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 276 KDCYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGNPVEIQIRTHEMHEI 335
Query: 298 AEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG + + + Q V W R +L Q E+
Sbjct: 336 AEFGVAAHWAYKEGKTEKVRADKMTQQVGWFREILELQDES 376
>gi|407693232|ref|YP_006818021.1| guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase
[Actinobacillus suis H91-0380]
gi|407389289|gb|AFU19782.1| guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase
[Actinobacillus suis H91-0380]
Length = 568
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 239/445 (53%), Gaps = 24/445 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY+ H V A ++A + + V A LLHD ++D + + + FGA VA++V+
Sbjct: 39 RSSGEPYITHPVAVASIIAEMKLDHEAVMAALLHDVIEDTPYTEEQLAAEFGASVAEIVQ 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +L R+ + + M LAM D R VLIKLADR HNM TL AL
Sbjct: 99 GVSKLDKLKFRTRQE------AQVENFRKMILAMTKDIRVVLIKLADRTHNMRTLGALRP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT--ELSSKLVECFDEAM 178
KR+R AKETLEI+ PLA+RLGI K +LE+LCF+ ++P ++ ++ + + +
Sbjct: 153 DKRRRIAKETLEIYSPLAHRLGIEHLKNELEDLCFQAMHPHRYRVLRMAIDMARGTRQDL 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+++ +++ L + I V GR K LYS++ KM ++ I DIY R++VEN +
Sbjct: 213 ISTISHEIQSRLDEAGIKGRVY-GREKHLYSLYEKMRQRDQHFHSILDIYAFRVVVENVD 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+ L +H L+ P K++DYI PK NGYQSLHT + G VP+EVQIRT++M L A
Sbjct: 272 NCYRVLGQMHSLYKPRPYKIRDYIAVPKSNGYQSLHTSMIGHKGVPIEVQIRTEDMDLMA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD------RSCVGNGD-SIK 351
E G AAHWRY E +S + +W R ++ Q A + D +S + + D +
Sbjct: 332 ELGVAAHWRYTEDQTTATSVQQKAQQWLRSIIELQQSAGNSDEFIENVKSDLFSDDIYVF 391
Query: 352 PP----CTFPSHADDCPFSYKPQCS-HDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAG 406
P P+ A F+Y D V I+ N Q + TV L E+
Sbjct: 392 TPKGRIVELPAKATAIDFAYAVHSDIGDRCVGAIVDRNPYPISQPLQSGQTVEILTEQGK 451
Query: 407 RGSSRWSPYGFPLK--EELRPRLNH 429
R S W + K ++R L H
Sbjct: 452 RPSPSWLTFVVSAKARSKIRTALKH 476
>gi|119509915|ref|ZP_01629057.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Nodularia
spumigena CCY9414]
gi|119465381|gb|EAW46276.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Nodularia
spumigena CCY9414]
Length = 756
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 201/339 (59%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H V A LL +G + ++AAG LHD ++D ++ + I FG V LVE
Sbjct: 60 RKSGELYISHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVTSEQIEEHFGPEVRQLVE 119
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ N T+ +A+ MFLAMA D R +++KLADRLHNM TL +
Sbjct: 120 GVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLQYMSE 173
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
R+R A+ET +IF PLANRLG+ K +LE+L FK+L P+ ++ + E E
Sbjct: 174 SSRRRSAQETRDIFAPLANRLGMWRIKWELEDLSFKYLEPEAFRQIQDHVSEKRAAREEK 233
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + L + L+ I + GR K LYSI+ KM +++ EI+D+ LR+IV+ E
Sbjct: 234 LAKTTDMLRERLQQAGIHCQDISGRPKHLYSIYQKMQRQQKEFHEIYDLAALRIIVQTNE 293
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY+AL VVH + +P + KDYI PK N YQSLHT V G PLE+QIRT EMH A
Sbjct: 294 ECYRALAVVHDAFRPIPSRFKDYIGLPKPNRYQSLHTGVIGLSGRPLEIQIRTVEMHHVA 353
Query: 299 EFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKE G + + W R +L WQ +
Sbjct: 354 EYGIAAHWKYKETGGSTSQLTNADEKFTWLRHLLEWQSD 392
>gi|359766961|ref|ZP_09270755.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia polyisoprenivorans NBRC
16320]
gi|359315589|dbj|GAB23588.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia polyisoprenivorans NBRC
16320]
Length = 806
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 206/344 (59%), Gaps = 18/344 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++ + A LLHDT++D S + + FGA VA LV+
Sbjct: 115 RKSGDPYITHPLAVATILADLGMDTITLVAALLHDTVEDTGYSLEQLESEFGAEVAHLVD 174
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 175 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 226
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 227 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 286
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 287 LARVRADINNALSSARITATV-EGRPKHYWSIYQKMIVKGREFDDIHDLVGMRILCDEVR 345
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT +MH A
Sbjct: 346 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTYDMHRTA 405
Query: 299 EFGFAAHWRYKEGDCQ----HSSFVLQM--VEWARWVLTWQCEA 336
EFG AAHWRYKE + S V ++ + W R +L WQ EA
Sbjct: 406 EFGIAAHWRYKESGYKDRKGRKSDVAEVDDMAWMRQLLDWQREA 449
>gi|350545396|ref|ZP_08914883.1| GTP pyrophosphokinase , (p)ppGppsynthetase II /
Guanosine-3',5'-bis(diphosphate)3'-pyrophosphohydrolase
[Candidatus Burkholderia kirkii UZHbot1]
gi|350526830|emb|CCD39459.1| GTP pyrophosphokinase , (p)ppGppsynthetase II /
Guanosine-3',5'-bis(diphosphate)3'-pyrophosphohydrolase
[Candidatus Burkholderia kirkii UZHbot1]
Length = 795
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 204/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R G+PY+ H V A + A ++ + A LLHD ++D ++ I FGA VA+LV+
Sbjct: 100 RQRGEPYITHPVAVAEICAGWKLDAQSIMAALLHDVIEDQGVTKTEITERFGAKVAELVD 159
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ RE +A+ M LAMA D R +L+KLADRLHNM TL A+P
Sbjct: 160 GLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMHTLGAVPP 213
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP+++ L + K +
Sbjct: 214 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPNRYATLEKAVKAARGNRREV 273
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E +++ + D I+ V GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 274 VGKILEAVQRTIADAKINAEV-TGREKTIYSIYKKMRDKQLSFSQVLDVYGFRVVVESAL 332
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E QIRT++MH A
Sbjct: 333 ECYTCIGALHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQIRTRKMHEIA 392
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + + +W + +L Q EA
Sbjct: 393 EAGVAAHWLYKNGGTDLNDVQKRAHQWLKSLLDIQSEA 430
>gi|315640053|ref|ZP_07895178.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
gi|315484181|gb|EFU74652.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
Length = 745
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 207/341 (60%), Gaps = 12/341 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + + VA G LHD ++D ++ + FG VA LV
Sbjct: 51 FRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHDVVEDTDVTLQDLTEEFGPDVAMLV 110
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M +AMA D R +++KLADRLHNM TL L
Sbjct: 111 DGVTKLGKIKYKSHEEQLA------ENHRKMLIAMAQDLRVIMVKLADRLHNMRTLKHLR 164
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++R A+ETL+I+ PLA+RLGIS K +LE+ +++NP Q+ + + DE A
Sbjct: 165 EDKQRRIARETLDIYAPLAHRLGISRIKWELEDRSLRYINPQQYYRIVHLMKTKRDEREA 224
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
V +E+L A ++ +I + + GR K +YSI+ KM+ KK DEI+D+ +R+IV++
Sbjct: 225 YVDKTVEELRIATEELDI-YAEIYGRPKHIYSIYRKMVDKKKQFDEIYDLLAIRVIVDSI 283
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY L +H W +PG+ KDYI PK N YQSLHT V G P+E+QIRT EMH
Sbjct: 284 KDCYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPNGNPVEIQIRTHEMHEI 343
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHW YKEG D + + + V W + +L + E+
Sbjct: 344 AEFGVAAHWAYKEGKTDKVNPDQMTEQVGWFKEILELKDES 384
>gi|225850169|ref|YP_002730403.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
gi|225646582|gb|ACO04768.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
Length = 716
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 203/333 (60%), Gaps = 11/333 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY +H +E A +LA + + T + AGLLHD ++D + D I FG VA +V
Sbjct: 43 FRKSGEPYYIHPIEAAKVLADLKLDRTTIIAGLLHDVVEDTDTTIDEIKERFGETVALIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+K+ + N + + EA+ M ++MA D R +L+KLADRLHN+ TLD LP
Sbjct: 103 DGVTKIGKY------NFNSKEEAEAENFRKMLVSMAKDIRVILVKLADRLHNIRTLDPLP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R AKETL+I+ PLA RLG+ K +LE+ FK+L P+ + ++++ L E E
Sbjct: 157 EYKQKRIAKETLDIYAPLAARLGLWKIKAELEDTSFKYLYPEAYKKITTYLAESKTVQEK 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++ L NI + R K LYSI+ K L+K L++ +I+D+YG+R++V
Sbjct: 217 YLQEIISQIRDVLDKHNIKADIQY-RAKHLYSIYEKTLRKDLSLSDIYDVYGVRVLVHTI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL ++H LW VPG+ KDYI+ PK N YQ+LHT V +E+QI+T +MH
Sbjct: 276 KDCYLALGLIHSLWPPVPGRFKDYISLPKSNMYQALHTTVVAPKGKFVEIQIKTYKMHRI 335
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVL 330
AE G AAHWRYK G S L+ W R +L
Sbjct: 336 AEEGIAAHWRYKGGKYI-SEKDLKSFTWLRNIL 367
>gi|392416165|ref|YP_006452770.1| (p)ppGpp synthetase, RelA/SpoT family [Mycobacterium chubuense
NBB4]
gi|390615941|gb|AFM17091.1| (p)ppGpp synthetase, RelA/SpoT family [Mycobacterium chubuense
NBB4]
Length = 794
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 206/345 (59%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FG V LV
Sbjct: 102 LRKSGDPYITHPLAVANILAELGMDTTTLIAALLHDTVEDTGYTLEALTAEFGTEVGHLV 161
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 162 DGVTKLDKVA--------LGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 213
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 214 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 273
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 274 YLAKVRAEITTTLGASKIN-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEV 332
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT +MH
Sbjct: 333 RDCYAAVGVVHSLWQPIAGRFKDYIAQPRFGVYQSLHTTVVGPEGKPLEVQIRTIDMHKT 392
Query: 298 AEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE + HS+ + + W R +L WQ EA
Sbjct: 393 AEYGIAAHWRYKEAKGRNGLPAGHSAAEIDDMAWMRQLLDWQREA 437
>gi|392943901|ref|ZP_10309543.1| (p)ppGpp synthetase, RelA/SpoT family [Frankia sp. QA3]
gi|392287195|gb|EIV93219.1| (p)ppGpp synthetase, RelA/SpoT family [Frankia sp. QA3]
Length = 836
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 214/354 (60%), Gaps = 28/354 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG PY+ H + A +LA +G ++ ++A LLHDTL++ LS + I TFG +A +V
Sbjct: 133 VRFSGHPYITHPIAVASILADLGMDTPTLSAALLHDTLEETSLSAEAIRETFGDQIALIV 192
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+ VSKL+++ + +A+ + M +AMA D RA+++KLADRLHNM TL LP
Sbjct: 193 DAVSKLNRVK--------VGEAAQAETIRRMVVAMARDPRALVVKLADRLHNMRTLRFLP 244
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A+ETLE++ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 245 EHKQERKARETLEVYAPLAHRLGMNSLKWELEDLAFAALYPKRYDEIVRLVADRAPSRDV 304
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +++ + D I V+ GR K YSI+ KM+ + + D+I+D+ G+R++V++
Sbjct: 305 YLAEVIGQVQAGVGDARIR-AVVSGRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVDSV 363
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L VH W +PG+ KDYI PKFN YQSLHT V G P+E+QIRT MH +
Sbjct: 364 RDCYATLGTVHANWKPIPGRFKDYIAMPKFNMYQSLHTTVIGPEGKPVELQIRTHAMHNR 423
Query: 298 AEFGFAAHWRYKEGD--CQHSSFVL--------------QMVEWARWVLTWQCE 335
AE+G AAHW+YKE + S+ V+ ++ W R VL WQ E
Sbjct: 424 AEYGIAAHWKYKEDGVAARPSAGVVDGGRSGRRRGGPEPDLMSWLRQVLDWQRE 477
>gi|374579512|ref|ZP_09652606.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus youngiae
DSM 17734]
gi|374415594|gb|EHQ88029.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus youngiae
DSM 17734]
Length = 748
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 210/354 (59%), Gaps = 25/354 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+ Y+LH ++ A +L + + VAA LLHD ++D + I + FG +A LV
Sbjct: 37 LRNSGEDYILHPLQVAQILVELEMDEATVAASLLHDVVEDTAFTIHDIEKEFGPEIALLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +L+ ++ + + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 97 DGVTKLGRLAYKSKVEQ------QVENLRKMFLAMAKDIRVILIKLADRLHNMRTLRYHS 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
+ K++ A+ETLEIF PLANRLGI K +LE+L F++L P ++ +L L EA
Sbjct: 151 VEKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLRPQEYYDLVEGIALKRREREA 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++ + L + I + + GR K YSI+ KM + ++EI+D+ +R+IV++
Sbjct: 211 YINEVIVQMRERLNEVEI-YADIAGRPKHFYSIYRKMKTQNKELNEIYDLMAIRVIVDSV 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL ++H +W +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 270 NDCYGALGIIHTMWKPIPGRFKDYIAMPKPNMYQSLHTTLIGVHGEPFEIQIRTCEMHRT 329
Query: 298 AEFGFAAHWRYKEG------------DCQHSSFVL---QMVEWARWVLTWQCEA 336
+E+G AAHW+YKEG DC + + + Q + W R +L WQ ++
Sbjct: 330 SEYGIAAHWKYKEGSSKECGRSSNNKDCGYKTASVNFDQKLSWLRQLLEWQHDS 383
>gi|227503518|ref|ZP_03933567.1| GTP pyrophosphokinase [Corynebacterium accolens ATCC 49725]
gi|227076021|gb|EEI13984.1| GTP pyrophosphokinase [Corynebacterium accolens ATCC 49725]
Length = 764
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 210/343 (61%), Gaps = 18/343 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H + A + A IG ++T + A LLHDT++D + + + R FG VA LV
Sbjct: 71 FRKSGEPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTDYTLEDLTRDFGPEVARLV 130
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AMA D R ++IK++DRLHNM T+ LP
Sbjct: 131 DGVTKLDKVALGA--------AAEAETIRKMIVAMANDPRVLVIKVSDRLHNMRTMRFLP 182
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE---CFDE 176
K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + E D
Sbjct: 183 PEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEIVRMVAERAPSRDR 242
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A+ I ++ ALK+ I V+ GR K +SI+ KM+ + EI D+ G+R++V++
Sbjct: 243 AL-KEIINQVGAALKENGIEAEVM-GRPKHYWSIYQKMVVRGREFAEIFDLVGIRVLVDD 300
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
CY A+ VVH ++ +PG+ KDYI+ P+F YQSLHT V +G LEVQ+RT EMH
Sbjct: 301 INSCYAAIGVVHSIYQALPGRFKDYISSPRFGVYQSLHTTVLADGGATLEVQVRTHEMHY 360
Query: 297 QAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE + H V QM W R +L WQ EA
Sbjct: 361 NAEFGVAAHWRYKETKGKNSGHQEEVDQMA-WMRQLLDWQKEA 402
>gi|428297512|ref|YP_007135818.1| (p)ppGpp synthetase I SpoT/RelA [Calothrix sp. PCC 6303]
gi|428234056|gb|AFY99845.1| (p)ppGpp synthetase I, SpoT/RelA [Calothrix sp. PCC 6303]
Length = 758
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 203/339 (59%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A LL +G + ++AAG LHD ++D ++ + I FG V LVE
Sbjct: 60 RKSGEPYIYHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTEVTVEDIESKFGEEVRRLVE 119
Query: 62 GVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS++ N SKT +A+ MFLAMA D R +++KLADRLHNM T++ +
Sbjct: 120 GVTKLSKI-------NFKSKTEGQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTMEVMS 172
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
R+R A+ET +I+ PLANRLGI +K +LE+L FK+L P E+ + E D E
Sbjct: 173 EESRRRNAQETRDIYAPLANRLGIWRFKWELEDLAFKYLEPQSFREMQKHVAEKRDARED 232
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + L + + I + GR K LYSI KM ++ +EI+D+ +R+IV
Sbjct: 233 RLKTVSDMLRTRMVEAGIQCTDISGRPKHLYSIFQKMQRQNKEFNEIYDLAAIRVIVTTN 292
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
E+CY+AL V+H ++ +PG+ KDYI PK N YQSLHT V PLE QIRT EMH
Sbjct: 293 EECYRALAVLHDVFRPIPGRFKDYIGLPKSNRYQSLHTGVISPWGRPLEAQIRTLEMHRI 352
Query: 298 AEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 333
AE+G AAHW+YKE + +S + W R +L WQ
Sbjct: 353 AEYGIAAHWKYKETGGSNFTQTSPSDEKFTWVRQLLEWQ 391
>gi|160903362|ref|YP_001568943.1| (p)ppGpp synthetase I SpoT/RelA [Petrotoga mobilis SJ95]
gi|160361006|gb|ABX32620.1| (p)ppGpp synthetase I, SpoT/RelA [Petrotoga mobilis SJ95]
Length = 712
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 205/334 (61%), Gaps = 6/334 (1%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+ + H ++LA + + + AGLLHD ++D +S D I FG VA++V
Sbjct: 43 FRDSGEEFFEHPKSVGLILAGLKMDVDTIIAGLLHDVVEDCGVSIDKIKDLFGIDVANIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
GV+K+S L R N K++E + + M AM+ D R +++KLADRLHNM TL+ +
Sbjct: 103 SGVTKISNLKLNERLNENDMKSLEKVETIRKMLFAMSEDIRVIIVKLADRLHNMRTLEFV 162
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDE 176
K+ A ETL+I+ P+A+RLGI K +LE+L F++L P+ + +L +K+ E +
Sbjct: 163 DRKKQIAKADETLKIYAPIAHRLGIYKMKEELEDLSFRYLYPETYFDLKTKIEEKIRLGQ 222
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ + ++Q L ++ I V GR K LYSI KM++K T+DEI+D LR+I E+
Sbjct: 223 NRLNEYAQIIKQELDNQKIKATV-EGRSKHLYSIWDKMIRKGKTLDEIYDYIALRIITED 281
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
+ CY L ++H +W+ VPG++KDYI PKFNGY+SLHT V PLE+QIR EMH
Sbjct: 282 QNKCYAVLGIIHSIWSPVPGRIKDYIATPKFNGYKSLHTTVITHKGDPLEIQIRDWEMHE 341
Query: 297 QAEFGFAAHWRYKEGDCQHS-SFVLQMVEWARWV 329
+AE+G AAHW YKEG Q F+ ++E R++
Sbjct: 342 EAEYGLAAHWVYKEGVSQEKLKFLTDLMELHRYI 375
>gi|404445132|ref|ZP_11010277.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium vaccae ATCC 25954]
gi|403652652|gb|EJZ07679.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium vaccae ATCC 25954]
Length = 803
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 205/345 (59%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + + FG V LV
Sbjct: 111 LRRSGDPYITHPLAVANILAELGMDTTTLIAALLHDTVEDTGYTLEALTQEFGVEVGHLV 170
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 171 DGVTKLDKVA--------LGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 222
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 223 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 282
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L I V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 283 YLAKVRAEITATLNSSKIHATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEV 341
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT +MH
Sbjct: 342 RDCYAAVGVVHSLWQPIAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTIDMHKT 401
Query: 298 AEFGFAAHWRYKEGDC------QHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE QH++ + + W R +L WQ EA
Sbjct: 402 AEYGIAAHWRYKEAKGRNGTPPQHAATEIDDMAWMRQLLDWQREA 446
>gi|405375362|ref|ZP_11029395.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Chondromyces apiculatus DSM 436]
gi|397086374|gb|EJJ17492.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 740
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 205/334 (61%), Gaps = 13/334 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL+H +E A +L + + + GLLHDT++D + + + FG+ VA LV
Sbjct: 38 LRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLATAEELTELFGSEVAHLV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KLS+ S A + + + +A+ M +AMA D R +L+KLADR HNM TLD +
Sbjct: 98 DGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMS 154
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P + LS KL + E
Sbjct: 155 EEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQEFFALSEKLNKRKKEREK 214
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + + L ++ + V GR K +YSI+ K+ + + D+IHDI R+I
Sbjct: 215 YIEETCDVIRSKLAERGLKGEV-SGRFKHVYSIYKKIKSQGIDFDQIHDIIAFRIIAPTA 273
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY+AL +VH++W VPG+ KD+I PK N YQSLHT + G +EVQIRT+EMH
Sbjct: 274 PSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSERVEVQIRTEEMHKI 333
Query: 298 AEFGFAAHWRYKEG------DCQHSSFVLQMVEW 325
AE G AAHW+YKEG D + +++ Q++EW
Sbjct: 334 AEEGIAAHWKYKEGKAVISKDDEKFAWLRQLMEW 367
>gi|386856222|ref|YP_006260399.1| ppGpp synthetase I, SpoT/RelA [Deinococcus gobiensis I-0]
gi|379999751|gb|AFD24941.1| ppGpp synthetase I, SpoT/RelA [Deinococcus gobiensis I-0]
Length = 753
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 209/344 (60%), Gaps = 34/344 (9%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYDYIFRTFGAGVADLV 60
R SG+PY+ H V A++LA +G +S + AGLLHDT++D +++ I FGA V +V
Sbjct: 35 RKSGEPYITHPVAVAVILAKLGMDSDSLMAGLLHDTVEDVEGVTFAGIEALFGADVRRIV 94
Query: 61 EGVSKLSQLSKLARENNTASKT---VEADRLHTMFLAM-ADARAVLIKLADRLHNMMTLD 116
EG +K+S+LSK + S T V+A+ L M +AM AD R +++KLADRLHNM TL
Sbjct: 95 EGETKVSKLSKQGSQAAQVSDTGRDVQAENLRQMLVAMTADIRIIVVKLADRLHNMRTLG 154
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE 176
++ K+ R A+ET+EIF PLA+RLGI K +LE+L F++LNPD + LS++L +E
Sbjct: 155 SMKPEKQARIARETMEIFAPLAHRLGIGQIKWELEDLSFRYLNPDAYEYLSTRLRTRQEE 214
Query: 177 --AMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 229
A++ A+ +L + L D + +S + + GR K L+SIH KM K+ +++I D+
Sbjct: 215 REALIAEAVAQLREGLDDDLELHEWVSGIDIAGRSKHLWSIHNKMQKEGKGLEQIFDLLA 274
Query: 230 LRLIVENEE----------------------DCYQALRVVHQLWAEVPGKMKDYITRPKF 267
+R+I+ + CY + VVH +W +PG+ KDYI PK
Sbjct: 275 IRVILRPRDLVVPPGTDEKRRERAEETREKRICYHTVSVVHSMWTPLPGRFKDYIAVPKP 334
Query: 268 NGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 311
NGYQSLHT V + P+EVQIR+ MH AE+G AAHW YK+G
Sbjct: 335 NGYQSLHTTVISQSGQPIEVQIRSLRMHEVAEYGVAAHWMYKQG 378
>gi|198282856|ref|YP_002219177.1| (p)ppGpp synthetase I SpoT/RelA [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198247377|gb|ACH82970.1| (p)ppGpp synthetase I, SpoT/RelA [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 759
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 205/339 (60%), Gaps = 13/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +LA + + + A LLHD ++D +S + I FG VA++V+
Sbjct: 74 RRSGEPYIHHPVAVACILAELQLDIFTIQAALLHDVIEDCNISKENITERFGPEVAEMVD 133
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL Q+ RE +A+ MFLAM+ D R VLIKLADRLHNM T+ +
Sbjct: 134 GVSKLGQVRFETREE------AQAENFRKMFLAMSRDIRVVLIKLADRLHNMRTMGVMTP 187
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KR+R ++ETL+I+ P+A RLGI +++LE L F HL P + L+ +
Sbjct: 188 EKRRRISRETLDIYAPIAQRLGIHAIRIELEELAFSHLYPKRWHTLNEAVKAA--RGNRK 245
Query: 181 SAIEKLEQALKDKNI--SFLV-LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
A++K+E AL+D+ + F + GR K +YSI+ KM KK + +IHD++ R+IV +
Sbjct: 246 EAVQKIEHALEDRLLQEGFAAQVSGREKHVYSIYRKMQKKGMPFGDIHDLHAFRIIVADV 305
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+ L +VH L+ +PG+ KDYI PK NGYQSLHTV+ G P+EVQIRT++MH
Sbjct: 306 DTCYRVLGLVHSLYRPIPGRFKDYIAIPKSNGYQSLHTVLLGPFGHPVEVQIRTEDMHRV 365
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE G AAHW YK G ++ +Q W + +L Q +
Sbjct: 366 AEAGVAAHWLYKTG-SNNAHAEIQARAWLQRLLELQIQG 403
>gi|218666350|ref|YP_002425057.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|218518563|gb|ACK79149.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 734
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 205/339 (60%), Gaps = 13/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A +LA + + + A LLHD ++D +S + I FG VA++V+
Sbjct: 49 RRSGEPYIHHPVAVACILAELQLDIFTIQAALLHDVIEDCNISKENITERFGPEVAEMVD 108
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL Q+ RE +A+ MFLAM+ D R VLIKLADRLHNM T+ +
Sbjct: 109 GVSKLGQVRFETREE------AQAENFRKMFLAMSRDIRVVLIKLADRLHNMRTMGVMTP 162
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KR+R ++ETL+I+ P+A RLGI +++LE L F HL P + L+ +
Sbjct: 163 EKRRRISRETLDIYAPIAQRLGIHAIRIELEELAFSHLYPKRWHTLNEAVKAA--RGNRK 220
Query: 181 SAIEKLEQALKDKNI--SFLV-LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
A++K+E AL+D+ + F + GR K +YSI+ KM KK + +IHD++ R+IV +
Sbjct: 221 EAVQKIEHALEDRLLQEGFAAQVSGREKHVYSIYRKMQKKGMPFGDIHDLHAFRIIVADV 280
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+ L +VH L+ +PG+ KDYI PK NGYQSLHTV+ G P+EVQIRT++MH
Sbjct: 281 DTCYRVLGLVHSLYRPIPGRFKDYIAIPKSNGYQSLHTVLLGPFGHPVEVQIRTEDMHRV 340
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE G AAHW YK G ++ +Q W + +L Q +
Sbjct: 341 AEAGVAAHWLYKTG-SNNAHAEIQARAWLQRLLELQIQG 378
>gi|392402740|ref|YP_006439352.1| (p)ppGpp synthetase I, SpoT/RelA [Turneriella parva DSM 21527]
gi|390610694|gb|AFM11846.1| (p)ppGpp synthetase I, SpoT/RelA [Turneriella parva DSM 21527]
Length = 679
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/453 (36%), Positives = 238/453 (52%), Gaps = 54/453 (11%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A LA +G + VV AGLLHD L+D F+ +Y+ + FG + LVE
Sbjct: 53 RLSGEPYIIHPLAVAHTLADLGLDHEVVCAGLLHDVLEDTFIKPEYMRQEFGETITYLVE 112
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALPL 120
V+K+S L EN +A + M +A + D+R +LIKLAD+LHNM TL
Sbjct: 113 SVTKISVLKTQTAENK------QAINIRKMIMATIRDSRVILIKLADKLHNMRTLGFHST 166
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K + A+E LEI+ PLA RLGI K +LE+L HL+ + + K+ E +
Sbjct: 167 NKGMQIAREVLEIYAPLAGRLGIYKIKSELEDLALYHLDRTTYALIKDKIAEKKGQRDGR 226
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + L Q LK+ I V GR K YSI+ KM+++K ++I+D+ G+R++V
Sbjct: 227 VAMVMSLLTQHLKESKIKATV-EGRSKHFYSIYNKMIEQKKFFEDIYDLTGVRVLVNEVP 285
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH LW PG+ KDYI+ PK NGYQSLHT V G G P+EVQIRT +MH +
Sbjct: 286 DCYTVLGLVHTLWTPFPGRFKDYISVPKSNGYQSLHTTVIGPGGQPVEVQIRTWKMHRVS 345
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPS 358
EFG A+HW YKE +F Q L Q A+S D + +GD + + S
Sbjct: 346 EFGIASHWAYKEKPGDQKTFETQF-------LDLQNMAISDDEA--DSGDFYQELVSNLS 396
Query: 359 HADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFP 418
A++ V+VI + K + P +STV+D + F
Sbjct: 397 QANE--------------VYVI---SPKGKIFTMPENSTVLD--------------FAFR 425
Query: 419 LKEELRPRLNHKAVGDP----RCKLKMGDVVEL 447
+ ++ R +GD R LK GD +E+
Sbjct: 426 IHTDIGLRCAGAKIGDRLVSIRTPLKNGDQIEI 458
>gi|386775351|ref|ZP_10097729.1| (p)ppGpp synthetase, RelA/SpoT family protein [Brachybacterium
paraconglomeratum LC44]
Length = 805
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/342 (41%), Positives = 207/342 (60%), Gaps = 18/342 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H V A +LA +G+ + VVAA LLHDT++D S D + FG +A +V+
Sbjct: 97 RRSGDPYITHPVSVATILAELGSPADVVAAALLHDTVEDTDYSLDQLRAEFGEVIAVMVD 156
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ T + +A+ + M +AM+ D R +LIKLADRLHN T +P
Sbjct: 157 GVTKLDKV--------TYGEAAQAETVRKMIVAMSRDVRVLLIKLADRLHNARTWKYVPA 208
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
+R AKETLEI+ PLA+RLG++T K +LE+ F+ L P + E+ S + + E
Sbjct: 209 ASAERKAKETLEIYAPLAHRLGLNTMKWELEDRSFQVLYPKVYEEIVSLVAQHAPAREQY 268
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+++ ++++ LK I V GR K YSI+ KM+ + +I+D+ G+R++V+
Sbjct: 269 LSTVSSQIQEDLKKARIKAEV-TGRPKHYYSIYQKMIVRGRDFSDIYDLVGVRVLVDTVR 327
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +H W+ V G+ KDYI PKFN YQSLHT V G P+EVQIRT+EMH +A
Sbjct: 328 DCYGVLGTLHARWSPVQGRFKDYIALPKFNLYQSLHTTVIGPTGKPVEVQIRTREMHRRA 387
Query: 299 EFGFAAHWRYK-----EGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YK +G + S+ + W R ++ WQ E
Sbjct: 388 EYGVAAHWKYKAMAGGQGGGE-SAAITNDAAWLRQLMDWQKE 428
>gi|120403572|ref|YP_953401.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium vanbaalenii PYR-1]
gi|119956390|gb|ABM13395.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium vanbaalenii PYR-1]
Length = 788
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 206/345 (59%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + + FG V LV
Sbjct: 96 LRKSGDPYITHPLAVANILAELGMDTTTLIAALLHDTVEDTGYTLEALTQEFGTEVGHLV 155
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 156 DGVTKLDKVA--------LGTAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 207
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 208 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 267
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L I+ V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 268 YLAKVRAEITATLNASKINATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEV 326
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT +MH
Sbjct: 327 RDCYAAVGVVHSLWQPIAGRFKDYIAQPRFGVYQSLHTTVVGPEGKPLEVQIRTIDMHKT 386
Query: 298 AEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 387 AEYGIAAHWRYKEAKGRNGVPPSHAATEIDDMAWMRQLLDWQREA 431
>gi|308174461|ref|YP_003921166.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens DSM 7]
gi|307607325|emb|CBI43696.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens DSM
7]
Length = 734
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +A G LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++++ +++ NI GR K +YSI+ KM + +EI+D+ +R++V + +
Sbjct: 218 VDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMALQNKQFNEIYDLLAVRILVGSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
E+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 337 EYGVAAHWAYKEGKAANEEATFEKKLSWFREILEFQNES 375
>gi|334136491|ref|ZP_08509954.1| GTP diphosphokinase [Paenibacillus sp. HGF7]
gi|333605960|gb|EGL17311.1| GTP diphosphokinase [Paenibacillus sp. HGF7]
Length = 728
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 201/338 (59%), Gaps = 10/338 (2%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+LH + A +L + + T + A LLHD ++D +S + + FG A LV
Sbjct: 37 VRKSGEPYILHPLAVADILVDMQMDVTSIIAALLHDVVEDTTVSLEAVQDKFGRTCAMLV 96
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+G++KL ++ +E + + MF+AMA D R +LIKLADRLHNM TL
Sbjct: 97 DGLTKLERIKFKTKEEQ------QNENYRKMFVAMAQDIRVILIKLADRLHNMRTLKYQS 150
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
++R A ETLEIF P+A+RLGIS K ++E++ ++LNP Q+ + + + + E
Sbjct: 151 EESQRRIADETLEIFCPIAHRLGISAIKWEMEDIALRYLNPQQYYRIVNLMQKKRTEREK 210
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I ++ L++ I + GR K +YSIH KM + +EI+D+ LR+IV+N
Sbjct: 211 YIEDVIRNIQDKLREMGIEGDI-SGRPKHIYSIHKKMSSRNKQFNEIYDLMALRVIVDNI 269
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY AL ++H LW +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH
Sbjct: 270 KDCYAALGIIHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQIRTWEMHKT 329
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW YKEG+ ++W R +L Q E
Sbjct: 330 AEYGIAAHWAYKEGNGSPEGTFSDKMQWFREILELQKE 367
>gi|330815851|ref|YP_004359556.1| Guanosine polyphosphate pyrophosphohydrolases/synthetase
[Burkholderia gladioli BSR3]
gi|327368244|gb|AEA59600.1| Guanosine polyphosphate pyrophosphohydrolases/synthetase
[Burkholderia gladioli BSR3]
Length = 794
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 205/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ V A LLHD ++D + + FG VA+LV+
Sbjct: 97 RQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVMKSELAERFGPKVAELVD 156
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 157 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 210
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 211 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 270
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E ++A+ + + ++ GR K++YSI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 271 IGKILESAQRAVGEAKLEAEIM-GREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVEHAL 329
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY + +H L+ VPGK KDYI PK NGYQSLHT V G P+E Q+RT++MH A
Sbjct: 330 ECYTCIGALHALYKPVPGKFKDYIAIPKMNGYQSLHTTVVGPFGAPIEFQVRTRKMHEIA 389
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + ++ +W + +L Q EA
Sbjct: 390 EAGVAAHWLYKNGGADLNDVQMRAHQWLKSLLDIQSEA 427
>gi|379727159|ref|YP_005319344.1| GTP pyrophosphokinase [Melissococcus plutonius DAT561]
gi|376318062|dbj|BAL61849.1| GTP pyrophosphokinase [Melissococcus plutonius DAT561]
Length = 739
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 213/345 (61%), Gaps = 16/345 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA G LHD ++D ++ D + FG +A LV
Sbjct: 43 IRKSGEPYIIHPIQVAGILADLHMDPYTVATGFLHDVVEDTEITLDDLKDEFGESIAVLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M LAMA D R +L+KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVILVKLADRLHNMRTLKYLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R AKETLEI+ PLA+RLGIS K +LE+ +++NP+Q+ + SK +E
Sbjct: 157 EDKQRRIAKETLEIYAPLAHRLGISRVKWELEDTALRYINPNQYYRIVHLMQSKRIE--R 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E+ + A++++ + IS + GR K +YSI+ KM +K +EI+D+ +R+I++
Sbjct: 215 ESYIAQAVDEICYVTNELGISAEIY-GRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIID 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L +H W +PG+ KDYI PK N YQS+HT V G P+E+QIRT+EMH
Sbjct: 274 SIKDCYAVLGAIHTKWMPMPGRFKDYIAMPKTNMYQSIHTTVIGPMGNPIEIQIRTREMH 333
Query: 296 LQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEAMS 338
AEFG AAHW YKEG D S+ + + ++W R ++ Q E+ +
Sbjct: 334 KIAEFGVAAHWAYKEGKADRLKSNDLSKQLDWFREIVELQDESYN 378
>gi|384165231|ref|YP_005546610.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens LL3]
gi|328912786|gb|AEB64382.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens LL3]
Length = 734
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +A G LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++++ +++ NI GR K +YSI+ KM + +EI+D+ +R++V + +
Sbjct: 218 VDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMALQNKQFNEIYDLLAVRILVGSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
E+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 337 EYGVAAHWAYKEGKAANEEATFEKKLSWFREILEFQNES 375
>gi|283138927|gb|ADB12530.1| putative GTP pyrophosphokinase RelA [uncultured bacterium 9F08]
Length = 736
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 205/339 (60%), Gaps = 6/339 (1%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+RASG+PYL H + A ++A + + +AA +LHD ++D ++ + + G VA LV
Sbjct: 53 LRASGEPYLTHAMAVADIVAGLRLDHESIAAAILHDVVEDTGITLEQVAEQCGQAVAHLV 112
Query: 61 EGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
+GV+K+S + K ++A+ L + LAMA D R V+IKLADRLHNM TL L
Sbjct: 113 DGVTKMSYIGDYQLNGAQQGKEQIKAESLRKLLLAMAEDVRVVMIKLADRLHNMRTLKHL 172
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
P K++R A+ET++I+ PLANRLGI K +LE+L F++L+P + +++ L E +
Sbjct: 173 PEEKQRRIARETMDIYAPLANRLGIWQIKWELEDLSFRYLDPVTYKQVARFLDERRVDRQ 232
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ + I LE+ L DK + GR K L+SI KM K L+ +++D+ +R++V++
Sbjct: 233 GYIDNVIGILEKQL-DKAGVKADIKGRPKHLFSIWKKMKNKGLSFHDLYDVRAVRVLVDS 291
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY L VVH LW +P + DYI PK N YQS+HT V G G LEVQIRT EM
Sbjct: 292 VADCYHVLGVVHSLWPHIPKEFDDYIATPKENNYQSIHTAVVGPGGKTLEVQIRTWEMDK 351
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G AAHWRYKEG +H Q + W R +L W+ E
Sbjct: 352 HAELGVAAHWRYKEG-GRHDKGFEQKIAWLRQLLDWKEE 389
>gi|403724203|ref|ZP_10945960.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase, partial [Gordonia rhizosphera
NBRC 16068]
gi|403205676|dbj|GAB90291.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase, partial [Gordonia rhizosphera
NBRC 16068]
Length = 459
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 206/344 (59%), Gaps = 18/344 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + + FG+ V LV+
Sbjct: 97 RKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYTLEELEKDFGSEVGHLVD 156
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 157 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 208
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 209 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 268
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 269 LARVRADINNALGAARITATV-EGRPKHYWSIYQKMIVKGRDFDDIHDLVGIRILCDEVR 327
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT +MH A
Sbjct: 328 DCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKPLEVQIRTHDMHRTA 387
Query: 299 EFGFAAHWRYKE------GDCQHSSFVLQMVEWARWVLTWQCEA 336
EFG AAHWRYKE G + + + + W R +L WQ EA
Sbjct: 388 EFGIAAHWRYKESRGKGKGPRKSDTAEIDDMAWMRQLLDWQREA 431
>gi|163814889|ref|ZP_02206277.1| hypothetical protein COPEUT_01040 [Coprococcus eutactus ATCC 27759]
gi|158449828|gb|EDP26823.1| RelA/SpoT family protein [Coprococcus eutactus ATCC 27759]
Length = 814
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 209/340 (61%), Gaps = 16/340 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H + A++LA + + + AG+LHD ++D ++ + I F VA LV
Sbjct: 120 LRKSGEPYIMHPLNVAIILAELELDKETIVAGILHDVVEDTVMTSEEIASEFSEEVAFLV 179
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL+QL T V+A+ L MFL+MA D R +LIKLADRLHN+ TL
Sbjct: 180 DGVTKLTQLKM-----TTDKIEVQAENLRKMFLSMAKDIRVILIKLADRLHNLRTLQYQS 234
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K+ A+ET++I+ P+A+RLGIS KV+L++L +L P+ + +L +++ E E A
Sbjct: 235 PEKQIEKARETMDIYAPIAHRLGISKIKVELDDLSMMYLMPEVYNDLKAQIDEKLTERDA 294
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ +E +++ + + + + GR K +SI+ KM + T+D+I+DI+ +R+ V
Sbjct: 295 YIKRVVEDVKKHIDNAGLEAEI-DGRVKHFFSIYKKMKNQNKTLDQIYDIFAVRIKVNTV 353
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 354 RDCYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGPEGQPFEIQIRTYEMHRT 413
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 333
AE+G AAHW+YKE + V+Q E W R +L WQ
Sbjct: 414 AEYGIAAHWKYKEN---ITGTVMQKEEEKLSWLRQILEWQ 450
>gi|395240870|ref|ZP_10417894.1| GTP diphosphokinase [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475652|emb|CCI87871.1| GTP diphosphokinase [Lactobacillus gigeriorum CRBIP 24.85]
Length = 748
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 198/319 (62%), Gaps = 18/319 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
RASG PY++H + A LA +G + +AAG LHDT++D ++ D I FG VA +V
Sbjct: 46 FRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHDTVEDTPVTNDDIKNIFGEDVAFIV 105
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL++ + + A+ M +AMA D R +++KLADRLHNM TL+ L
Sbjct: 106 DGVTKLNKYQY------QSHQEFLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLEHLR 159
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD---- 175
K++R A ET++I+ PLA+RLGI + K +LE++ F +LNPD + ++V D
Sbjct: 160 PDKQRRIASETMDIYAPLADRLGIGSIKWELEDISFHYLNPDAYY----RIVGLMDVKRS 215
Query: 176 --EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
E ++ AI +++ L I + + GR K +YSI+ KM+ K ++I+D+ +R++
Sbjct: 216 ERERYISDAISVMKKTLDSLGIQYQIY-GRPKHIYSIYKKMVNKHKDFEDIYDLLAVRVL 274
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G PLE+QIRT++
Sbjct: 275 VKNVRDCYAVLGAVHTEWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPGGKPLEIQIRTEQ 334
Query: 294 MHLQAEFGFAAHWRYKEGD 312
MH AE+G AAHW YK G+
Sbjct: 335 MHEVAEYGVAAHWAYKRGN 353
>gi|418326147|ref|ZP_12937339.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
gi|365226304|gb|EHM67523.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
Length = 729
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 198/314 (63%), Gaps = 10/314 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R +G PY++H ++ A +L + + + AG LHD ++D +++ + F +A +V
Sbjct: 43 FRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ +F+A+A D R +L+KLADRLHNM TL A+P
Sbjct: 103 DGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q+ + + K EA
Sbjct: 157 REKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+T+AI K+E + + N+S + GR K +YSI+ KM+K+K D+I D+ +R+IV +
Sbjct: 217 YITNAINKIENEMTNMNLSGEI-NGRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 276 NDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEI 335
Query: 298 AEFGFAAHWRYKEG 311
AE G AAHW YKEG
Sbjct: 336 AEHGVAAHWAYKEG 349
>gi|332686842|ref|YP_004456616.1| GTP pyrophosphokinase [Melissococcus plutonius ATCC 35311]
gi|332370851|dbj|BAK21807.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Melissococcus
plutonius ATCC 35311]
Length = 739
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 213/345 (61%), Gaps = 16/345 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H ++ A +LA + + VA G LHD ++D ++ D + FG +A LV
Sbjct: 43 IRKSGEPYIIHPIQVAGILADLHMDPYTVATGFLHDVVEDTEITLDDLKDEFGESIAVLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E A + M LAMA D R +L+KLADRLHNM TL L
Sbjct: 103 DGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVILVKLADRLHNMRTLKYLR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R AKETLEI+ PLA+RLGIS K +LE+ +++NP+Q+ + SK +E
Sbjct: 157 EDKQRRIAKETLEIYAPLAHRLGISRVKWELEDTALRYINPNQYYRIVHLMQSKRIE--R 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
E+ + A++++ + IS + GR K +YSI+ KM +K +EI+D+ +R+I++
Sbjct: 215 ESYIAQAVDEICYVTNELGISAEIY-GRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIID 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L +H W +PG+ KDYI PK N YQS+HT V G P+E+QIRT+EMH
Sbjct: 274 SIKDCYAVLGAIHTKWMPMPGRFKDYIAMPKTNMYQSIHTTVIGPMGNPIEIQIRTREMH 333
Query: 296 LQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEAMS 338
AEFG AAHW YKEG D S+ + + ++W R ++ Q E+ +
Sbjct: 334 KIAEFGVAAHWAYKEGKADRLKSNDLSKQLDWFREIVELQDESYN 378
>gi|404420204|ref|ZP_11001949.1| GTP pyrophosphokinase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403660308|gb|EJZ14884.1| GTP pyrophosphokinase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 795
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 208/345 (60%), Gaps = 18/345 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FGA V LV
Sbjct: 103 LRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYTLEALTAEFGAEVGHLV 162
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ E + + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 163 DGVTKLDKV--------VLGSAAEGETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLP 214
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 215 PEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVADRAPSRDT 274
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ AL I+ V+ GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 275 YLAKVRAEIGVALSAMKIN-AVVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEI 333
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 334 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRT 393
Query: 298 AEFGFAAHWRYKEGDCQ----HSSFVLQM--VEWARWVLTWQCEA 336
AE+G AAHWRYKE + HS ++ + W R +L WQ EA
Sbjct: 394 AEYGIAAHWRYKEAKGRNGVPHSGAATEIDDMAWMRQLLDWQREA 438
>gi|328951506|ref|YP_004368841.1| (p)ppGpp synthetase I SpoT/RelA [Marinithermus hydrothermalis DSM
14884]
gi|328451830|gb|AEB12731.1| (p)ppGpp synthetase I, SpoT/RelA [Marinithermus hydrothermalis DSM
14884]
Length = 735
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 219/361 (60%), Gaps = 32/361 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDP++ H V A +LA + + + AGLLHDT++D ++ D I FG V +VE
Sbjct: 46 RKSGDPFITHPVAVAGILAELKMDEDTLIAGLLHDTVEDTDVTLDAIEARFGPTVRRIVE 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G +K+S+L K+A + + +A+ L MF+AM D R +++KLADRLHNM TL+ +P
Sbjct: 106 GETKVSKLPKIAE----SIEDEQAENLRQMFIAMTEDVRIIIVKLADRLHNMRTLEFMPP 161
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QR ++ETLEIF PLA+RLGI K +LE+L F++L+P++ L +L A
Sbjct: 162 EKQQRISRETLEIFAPLAHRLGIGQIKWELEDLAFRYLHPEECAALEVRL--SHHRAEHQ 219
Query: 181 SAIEKLEQALKDKNISFLVL---------CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 231
+ +E+ + AL++ VL GR K LYSI KM + T+++I+D+ LR
Sbjct: 220 AIVERAKAALEEALAKDYVLKLAVQEYTVTGRTKHLYSIWKKMERDGKTLEQIYDLLALR 279
Query: 232 LIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT-VV 277
+I++ ++ CY + +VH LW +PG++KDYI PK NGYQSLHT V+
Sbjct: 280 VILDPRPSSDPEEAKAREKQVCYHVIGLVHALWQPIPGRVKDYIAMPKPNGYQSLHTTVI 339
Query: 278 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAM 337
T +G+ PLEVQIRT+EMH AE+G AAHW YKEG + V + V W R + WQ E
Sbjct: 340 TWQGM-PLEVQIRTREMHRIAEYGIAAHWLYKEG-LTNPEEVKRRVSWLRAIQEWQQEFS 397
Query: 338 S 338
S
Sbjct: 398 S 398
>gi|340794503|ref|YP_004759966.1| GTP pyrophosphokinase [Corynebacterium variabile DSM 44702]
gi|340534413|gb|AEK36893.1| GTP pyrophosphokinase [Corynebacterium variabile DSM 44702]
Length = 732
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/342 (41%), Positives = 214/342 (62%), Gaps = 16/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY+ H + A + A IG ++T + A LLHDT++D S D + R FG VA LV
Sbjct: 36 LRKSGEPYITHPLAVANIAAEIGMDTTTLVAALLHDTVEDTDYSLDDLTRDFGPEVALLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 96 DGVTKLDKVA--------LGSAAEAETIRKMIVAMAHDPRVLVIKVADRLHNMRTMRFLP 147
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
K+ + A++TLE+ PLA+RLG++T K +LE+L F L P ++ E+ + + +
Sbjct: 148 PEKQAKKARQTLEVIAPLAHRLGMATIKWELEDLSFAILYPKKYDEIVRLVADRAPKRDQ 207
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I+++ +++ +I V+ GR K +SI+ KM+ + D+I D+ G+R++V++
Sbjct: 208 YLARIIDEIGATMREAHIVADVV-GRPKHYWSIYQKMIVRGRDFDDIFDLVGIRILVDDV 266
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+DCY A+ VH L+ +PG+ KDYI++P+F Y+SLHT V G LEVQIRT EMH Q
Sbjct: 267 KDCYAAVGAVHSLYQPMPGRFKDYISQPRFGVYRSLHTTVLGPDAKALEVQIRTHEMHYQ 326
Query: 298 AEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE H ++ V QM W R +L WQ EA
Sbjct: 327 AEYGIAAHWRYKETKGSHKGDNAEVDQMA-WMRQLLDWQKEA 367
>gi|154686901|ref|YP_001422062.1| RelA [Bacillus amyloliquefaciens FZB42]
gi|375363176|ref|YP_005131215.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|384266310|ref|YP_005422017.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|385265645|ref|ZP_10043732.1| GTP diphosphokinase [Bacillus sp. 5B6]
gi|387899344|ref|YP_006329640.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens Y2]
gi|394991954|ref|ZP_10384748.1| RelA [Bacillus sp. 916]
gi|421730833|ref|ZP_16169959.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|429506052|ref|YP_007187236.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|451346089|ref|YP_007444720.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens IT-45]
gi|452856418|ref|YP_007498101.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|154352752|gb|ABS74831.1| RelA [Bacillus amyloliquefaciens FZB42]
gi|371569170|emb|CCF06020.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|380499663|emb|CCG50701.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|385150141|gb|EIF14078.1| GTP diphosphokinase [Bacillus sp. 5B6]
gi|387173454|gb|AFJ62915.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens Y2]
gi|393807166|gb|EJD68491.1| RelA [Bacillus sp. 916]
gi|407074987|gb|EKE47974.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|429487642|gb|AFZ91566.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|449849847|gb|AGF26839.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens IT-45]
gi|452080678|emb|CCP22443.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 734
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + + +A G LHD ++D ++ D + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + ++++ +++ NI GR K +YSI+ KM + +EI+D+ +R++V + +
Sbjct: 218 VEEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMALQNKQFNEIYDLLAVRILVGSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 336
E+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 337 EYGVAAHWAYKEGKAANEEATFEKKLSWFREILEFQNES 375
>gi|317122080|ref|YP_004102083.1| (p)ppGpp synthetase I SpoT/RelA [Thermaerobacter marianensis DSM
12885]
gi|315592060|gb|ADU51356.1| (p)ppGpp synthetase I, SpoT/RelA [Thermaerobacter marianensis DSM
12885]
Length = 731
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 206/337 (61%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG ++ H + A++LA + ++ + A LLHDT++D ++ + + R FG VA LV+
Sbjct: 46 RASGRDFIEHPLAVALILADLELDAATLVAALLHDTVEDTPVTLEEVEREFGPEVALLVD 105
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+Q+ R +A+ L MFLAMA D R VLIKLADRLHNM TL +P
Sbjct: 106 GVTKLNQIEWRTRLEE------QAENLRKMFLAMARDIRVVLIKLADRLHNMRTLAVVPR 159
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAM 178
K+ ++ETLEIF PLA+RLG+S + +LE+L ++L P+++ EL+ ++ E +
Sbjct: 160 EKQIAKSRETLEIFAPLAHRLGMSQIQWELEDLALRYLEPERYRELAERIPRKRAEREEL 219
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
I L+ L + I + GR K YSI+ KM ++ + +I+D+ +R+IV+ +
Sbjct: 220 AQVIIATLKARLAEAGIRADI-QGRAKHFYSIYRKMYEQGKDLSQIYDLIAVRVIVDTVK 278
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL VVH +W +PG+ KDYI PK N YQSLHT V G P E+QIRT +MH A
Sbjct: 279 DCYGALGVVHTIWRPLPGRFKDYIATPKSNMYQSLHTTVIGPQGEPFEIQIRTWDMHRTA 338
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKE F ++ W R VL WQ +
Sbjct: 339 EYGIAAHWRYKERGRTDRDFDAKLA-WLRQVLEWQND 374
>gi|375087257|ref|ZP_09733639.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
gi|374562074|gb|EHR33409.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
Length = 740
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 207/340 (60%), Gaps = 13/340 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H + AM+L + + +AA LLHD ++D + + + FG VA L++
Sbjct: 45 RISGEMYITHPLHVAMILTDLHIDEVTIAAALLHDVVEDTIYTIEQMKELFGEEVAMLID 104
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ ++E+ + + MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 105 GVTKLSKMKYKSKEDQ------QLETYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMRE 158
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K++R AKETLE++ PLANRLGIS K +LE+LC ++L P+ + +L K+ + +E
Sbjct: 159 EKQKRIAKETLEVYAPLANRLGISNIKWELEDLCLRYLEPETYYDLVDKVNQKREERQGF 218
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ A+ K++Q ++ + GR K YSI+ KM K + +I D+ +R++V+
Sbjct: 219 INDAVAKIQQEFDKIHLKGEI-KGRAKHFYSIYRKMKKSNKDISDIFDLLAVRVLVQTIP 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H +W +PG+ KDYI PK NGYQSLHT V + +PLE+QIRT MH +
Sbjct: 278 DCYTVLGIIHAMWKPLPGRFKDYIAVPKTNGYQSLHTTVITDNGLPLEIQIRTFAMHAIS 337
Query: 299 EFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCE 335
E+G AAHW+YKE + +S + + W R ++T Q E
Sbjct: 338 EYGIAAHWKYKEAGNKSIGANSEYDKKLSWLRQMITLQDE 377
>gi|421190653|ref|ZP_15647949.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB422]
gi|421191378|ref|ZP_15648655.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB548]
gi|399969423|gb|EJO03763.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB422]
gi|399972201|gb|EJO06415.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Oenococcus
oeni AWRIB548]
Length = 748
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 194/312 (62%), Gaps = 9/312 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H ++ A +LA + + +AAG LHD ++D + D I + +G VAD+V+
Sbjct: 44 RKSGEDYIYHPIQVAGILADLKMDPDTIAAGFLHDVVEDTPETNDEIRQNYGDDVADIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E N A + LAMA D R +++KLADRLHNM TL
Sbjct: 104 GVTKLGRIHYESTEENMAENH------RKLLLAMAKDVRVIIVKLADRLHNMRTLQVHRP 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AM 178
K+ R A ETL+I+ PLA+RLG++ K +LE+L ++L+PD++ ++ + +E A
Sbjct: 158 EKQHRIASETLDIYAPLAHRLGLANIKWELEDLSLRYLDPDEYHRIAKMMHSRREERDAD 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ SA +++E+ + D I + GR K +YSI+ KM K EI+D+ +R++V++ +
Sbjct: 218 IASATKQIEKVISDLKIGHFEVTGRPKHIYSIYRKMTDKHKQFSEIYDLLAIRVLVDSVD 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY AL +H W +PG+ KDYI PK NGYQSLHT + G PLEVQIRT EMH A
Sbjct: 278 DCYAALGTIHANWKPLPGRFKDYIALPKPNGYQSLHTTIIGPNGHPLEVQIRTFEMHQVA 337
Query: 299 EFGFAAHWRYKE 310
EFG AAHW YKE
Sbjct: 338 EFGVAAHWAYKE 349
>gi|427714382|ref|YP_007063006.1| RelA/SpoT family (p)ppGpp synthetase [Synechococcus sp. PCC 6312]
gi|427378511|gb|AFY62463.1| (p)ppGpp synthetase, RelA/SpoT family [Synechococcus sp. PCC 6312]
Length = 760
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 214/339 (63%), Gaps = 14/339 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+PY+ H V A LL +G + ++AAG LHD ++D ++ + + FG V LVE
Sbjct: 50 RASGEPYIAHPVAVAGLLRDLGGGAALIAAGFLHDVIEDTVVTGEELEVQFGPEVRYLVE 109
Query: 62 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
GV+KLS + +SKT +A+ +FLAMA D R +++KLADRLHNM TL+ L
Sbjct: 110 GVTKLSNF-------DFSSKTERQAETFRHLFLAMAQDIRVIIVKLADRLHNMRTLEYLK 162
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ R A+ET +I+ PLANRLGI +K +LE+L FK+L P+ + ++ + + EA
Sbjct: 163 PEKQIRIAQETKDIYAPLANRLGIWRFKWELEDLSFKYLEPEAYRKMQELVADKRAIREA 222
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ A+ L++ + L + GR K LYSIH KM +++ EI+D+ G+R++V N+
Sbjct: 223 QLQEALNLLQERMGTLGFEHLEISGRPKHLYSIHQKMRRQQKEFHEIYDVAGIRVLVANK 282
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
++CY+AL VVH + +PG+ KDYI+ PK N YQSLHTVV G G PLEVQIRT EMH
Sbjct: 283 DECYRALAVVHDCFRSMPGRFKDYISLPKPNQYQSLHTVVIGLGGQPLEVQIRTTEMHAV 342
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQ 333
AE G AAHW+YKE G Q + + + W R +L WQ
Sbjct: 343 AENGIAAHWKYKETGGSQPNKWNARDEKFTWLRQLLDWQ 381
>gi|418412040|ref|ZP_12985305.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
gi|410890054|gb|EKS37854.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
Length = 729
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 198/314 (63%), Gaps = 10/314 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R +G PY++H ++ A +L + + + AG LHD ++D +++ + F +A +V
Sbjct: 43 FRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ ++E +A+ +F+A+A D R +L+KLADRLHNM TL A+P
Sbjct: 103 DGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q+ + + K EA
Sbjct: 157 REKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREA 216
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+T+AI K+E + + N+S + GR K +YSI+ KM+K+K D+I D+ +R+IV +
Sbjct: 217 YITNAINKIENEMTNMNLSGEI-NGRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSI 275
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L +VH LW +PG+ KDYI PK N YQSLHT V G PLE+QIRT EMH
Sbjct: 276 NDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEI 335
Query: 298 AEFGFAAHWRYKEG 311
AE G AAHW YKEG
Sbjct: 336 AEHGVAAHWAYKEG 349
>gi|229816634|ref|ZP_04446923.1| hypothetical protein COLINT_03683 [Collinsella intestinalis DSM
13280]
gi|229807762|gb|EEP43575.1| hypothetical protein COLINT_03683 [Collinsella intestinalis DSM
13280]
Length = 797
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/311 (44%), Positives = 191/311 (61%), Gaps = 9/311 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y+ H VE A++L+ + + VV A LLHDT++D S + FGA VADLV+
Sbjct: 83 RRSGEAYINHPVEVAIILSELKMDCDVVCAALLHDTVEDTTTSLADVTAFFGATVADLVD 142
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+ + + +A L MFLAM+ D R V++KLADRLHNM TL ALP
Sbjct: 143 GVTKLTNIDVDTMDGK------QALNLRKMFLAMSRDIRVVIVKLADRLHNMRTLAALPA 196
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAM 178
+R A+ET++++ PLA+RLG+S+ K +LE+L F +L P+ + ++ + E + E
Sbjct: 197 DRRLFKARETMDVYAPLADRLGMSSIKWELEDLSFFYLEPESYQRIARMVSESREARERF 256
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I+ L+ LK I + GR K +SI+ KM +K EI+D+ LR+I ++
Sbjct: 257 LAETIKALDDELKRAGIEGYQITGRSKHYWSIYQKMKRKGKEFSEIYDLVALRVITKSVV 316
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L H LW VPG+ KDYI PK N YQSLHT V G PLE+QIRT EMH QA
Sbjct: 317 DCYSTLGAAHSLWTPVPGRFKDYINMPKANNYQSLHTTVIGPTARPLEIQIRTYEMHEQA 376
Query: 299 EFGFAAHWRYK 309
E+G AAHW YK
Sbjct: 377 EYGIAAHWLYK 387
>gi|229820490|ref|YP_002882016.1| (p)ppGpp synthetase I SpoT/RelA [Beutenbergia cavernae DSM 12333]
gi|229566403|gb|ACQ80254.1| (p)ppGpp synthetase I, SpoT/RelA [Beutenbergia cavernae DSM 12333]
Length = 790
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 201/344 (58%), Gaps = 18/344 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H V A +LA +G +AA LLHDT++D S D + FG + LV
Sbjct: 79 LRKSGDPYITHPVAVATILAELGMTPPTLAAALLHDTVEDTPYSLDSLRADFGDEITLLV 138
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ T +A+ + M +AMA D R ++IKLADRLHN T +
Sbjct: 139 DGVTKLDKV--------TFGDAAQAETVRKMVVAMARDIRVLVIKLADRLHNARTWRYVS 190
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
QR A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+ + E E
Sbjct: 191 QESAQRKARETLEIYAPLAHRLGMNTIKWELEDLSFAALYPKVYDEIVRLVAERAPAREE 250
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ + E++ LK I V GR K YSI+ KM+ + DEI+D+ G+R++V++
Sbjct: 251 YLATVREQVTADLKSAKIRATV-TGRPKHYYSIYQKMIVRGRDFDEIYDLVGVRVLVDSL 309
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL +H W VPG+ KDYI PKFN YQSLHT V G G P+E+QIR++EMH +
Sbjct: 310 RDCYAALGALHSRWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPGGKPVEIQIRSQEMHRR 369
Query: 298 AEFGFAAHWRYKE------GDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE G + + W R ++ WQ E
Sbjct: 370 AEYGVAAHWKYKESPSAGRGKEKGGGAGTGEMPWLRQLIDWQQE 413
>gi|343521362|ref|ZP_08758330.1| RelA/SpoT family protein [Parvimonas sp. oral taxon 393 str. F0440]
gi|343396568|gb|EGV09105.1| RelA/SpoT family protein [Parvimonas sp. oral taxon 393 str. F0440]
Length = 717
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 212/340 (62%), Gaps = 13/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY +H V A +LA + + + AGL+HD L+D ++++ + F +A+LV
Sbjct: 36 FRNSGEPYFIHPVAVANILADLYMDDATIIAGLMHDILEDTEVTFEQMAEMFDEEIANLV 95
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ +++ + +AD L M LAM +D R ++IK+ADRLHN+ TL+ +
Sbjct: 96 DGVTKLKKIKYQSKQES------QADNLRKMLLAMNSDIRVIIIKIADRLHNIRTLEYMK 149
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K+ AKETLEI+ PLA RLG+S K +LE+L ++L P+ + +L+ ++ + E
Sbjct: 150 KAKQLEKAKETLEIYAPLAYRLGMSNVKWELEDLSLRYLEPEIYYDLAERVKKKRSEREK 209
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ IE++ +LK+ NI + GR KSLYSI+ KM K+ + DEI D+ +R+IV
Sbjct: 210 IINDIIEEISISLKEHNIQGEI-SGRPKSLYSIYKKMYKQNKSFDEIFDLTAVRIIVPTI 268
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLH-TVVTGEGLVPLEVQIRTKEMHL 296
DCY L +VH W +P + KDYI PK N YQSLH T+++ G V EVQIRT EMH
Sbjct: 269 SDCYAVLGIVHSKWKPIPSRFKDYIAVPKPNLYQSLHNTLISNSGDV-FEVQIRTFEMHK 327
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHW+YK G + +SF ++ W R ++ WQ E
Sbjct: 328 TAEYGIAAHWKYKAGVDRSTSFDDKLT-WLRQLMDWQREV 366
>gi|256828245|ref|YP_003156973.1| (p)ppGpp synthetase I SpoT/RelA [Desulfomicrobium baculatum DSM
4028]
gi|256577421|gb|ACU88557.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfomicrobium baculatum DSM
4028]
Length = 715
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 204/341 (59%), Gaps = 17/341 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H +E + +L + ++ + AGLLHDT++D +S I FG V +V
Sbjct: 38 IRLSGEPYLSHPLEVSNILVDLRLDAATIVAGLLHDTVEDTEVSIPQIVELFGPEVGAIV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ N + + +A+ + M LAMAD R +L+KLADRLHN+ TL+
Sbjct: 98 EGVTKISKM------NFESKEQAQAENIRKMILAMADDIRVILVKLADRLHNISTLEFQK 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K++ A+ETL I+ PLANRLG+ KVQLEN +++ PD + ++S + D+ A
Sbjct: 152 EYKQRAIAQETLGIYAPLANRLGLYRIKVQLENYGLRYMKPDVYAQISEGINRYQDQGQA 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ ++ L + I+ V GR K YSI+ KM ++ LT+D+I D+ R+IV N
Sbjct: 212 YIDKVSAMIQDVLAENEINGRV-KGRIKHTYSIYHKMKQRGLTLDQIFDMIAFRVIVNNL 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY L +VH LW VPGK KDYI+ PK N YQSLH+ V G +E+QIRT+EMH
Sbjct: 271 RECYTVLGLVHSLWKPVPGKFKDYISMPKANMYQSLHSTVIGPEGERIEIQIRTEEMHQL 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 335
AE G AAHW YKE H S Q + W R +L WQ +
Sbjct: 331 AENGVAAHWSYKE----HGSKKAQEADRFSWLRQILDWQGD 367
>gi|212702010|ref|ZP_03310138.1| hypothetical protein DESPIG_00012 [Desulfovibrio piger ATCC 29098]
gi|212674525|gb|EEB35008.1| RelA/SpoT family protein [Desulfovibrio piger ATCC 29098]
Length = 719
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 205/337 (60%), Gaps = 11/337 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL H + A LA +G + VAAGLLHDT++D + + I FG VAD+V+
Sbjct: 39 RLSGEPYLSHPLAVAYTLADMGFDEPTVAAGLLHDTVEDTGTTIEEIDDKFGEDVADIVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+S + +E +A+ + M LAM+ D R +++KLADRLHNM TLD
Sbjct: 99 GVTKISMIVFENKEE------AQAENIRKMILAMSHDMRVLMVKLADRLHNMSTLDFQKP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDEAM 178
K++R A+ET++I+ PLANRLG+ K QLE+L FK+L PD + ++ L + ++ +
Sbjct: 153 HKQRRIAQETMDIYAPLANRLGLYLLKRQLEDLSFKYLRPDIYNQIDHWLDAHQVVEKQI 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + ++ L + V GR K YSI+ KM + LT+DE+HDI R++V++
Sbjct: 213 IEKVVSLIQDLLASNGLEGQVY-GRIKHKYSIYKKMQSQSLTLDEMHDIMAFRVLVKDIR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L +VH W V G+ KDYI+ PK NGYQSLHT V G +E+QIRT+EMH QA
Sbjct: 272 DCYAVLGLVHSQWKPVHGRFKDYISMPKANGYQSLHTTVIGPEGERIEIQIRTEEMHRQA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E G AAHW YKE + +S L+ W R + Q +
Sbjct: 332 EHGVAAHWLYKE-KGRVNSKDLEQFSWLREIFERQGD 367
>gi|221201205|ref|ZP_03574245.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Burkholderia
multivorans CGD2M]
gi|221206341|ref|ZP_03579354.1| RelA/SpoT family protein [Burkholderia multivorans CGD2]
gi|221173650|gb|EEE06084.1| RelA/SpoT family protein [Burkholderia multivorans CGD2]
gi|221179055|gb|EEE11462.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Burkholderia
multivorans CGD2M]
Length = 788
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 204/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E ++A+ D + + GR K++YSI+ KM K+L+ ++ D+YG R++V++
Sbjct: 264 IGKILEAAQRAMADAKLDAEI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + + +W + +L Q EA
Sbjct: 383 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 420
>gi|163791111|ref|ZP_02185530.1| GTP pyrophosphokinase [Carnobacterium sp. AT7]
gi|159873583|gb|EDP67668.1| GTP pyrophosphokinase [Carnobacterium sp. AT7]
Length = 370
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/316 (43%), Positives = 202/316 (63%), Gaps = 14/316 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ A +LA + + VA G LHD ++D +++ I R F VA LV
Sbjct: 43 FRKSGEPYIIHPIQVAGILAELKMDPVTVATGFLHDVVEDTEYTFEDISREFSPEVAMLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ + E +A+ M LAMA D R +++KLADRLHN+ TL
Sbjct: 103 DGVTKLGKIKFKSHEEQ------QAENHRKMLLAMAKDLRVIMVKLADRLHNLRTLKFHR 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE----LSSKLVECFD 175
K++R A ETLEI+ PLA+RLGI+ K +LE+ ++LNP Q+ ++SK E
Sbjct: 157 PEKQRRIANETLEIYAPLAHRLGINLIKWELEDTSLRYLNPQQYYRIVHLMNSKREE--R 214
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
EA ++ +I K+++++++ NI+ + GR K +YSI+ KM +K D+I+D+ +R+IV+
Sbjct: 215 EAYISDSISKIQESVEELNIT-ADITGRPKHIYSIYRKMRDQKKQFDQIYDLLAIRVIVD 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+ +DCY L +H W +PG+ KDYI PK N YQS+HT V G+ P+EVQIRTKEMH
Sbjct: 274 SIKDCYAVLGAIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGQYGKPIEVQIRTKEMH 333
Query: 296 LQAEFGFAAHWRYKEG 311
AE+G AAHW YKEG
Sbjct: 334 AVAEYGVAAHWAYKEG 349
>gi|52081239|ref|YP_080030.1| GTP pyrophosphokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319644794|ref|ZP_07999027.1| GTP pyrophosphokinase [Bacillus sp. BT1B_CT2]
gi|404490119|ref|YP_006714225.1| GTP pyrophosphokinase RelA [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683219|ref|ZP_17658058.1| GTP pyrophosphokinase [Bacillus licheniformis WX-02]
gi|52004450|gb|AAU24392.1| GTP pyrophosphokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52349121|gb|AAU41755.1| GTP pyrophosphokinase RelA [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392603|gb|EFV73397.1| GTP pyrophosphokinase [Bacillus sp. BT1B_CT2]
gi|383439993|gb|EID47768.1| GTP pyrophosphokinase [Bacillus licheniformis WX-02]
Length = 733
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 204/339 (60%), Gaps = 11/339 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + +A G LHD ++D ++ + + F VA LV+
Sbjct: 44 RKSGEPYIIHPIQVAGILVDLEMDPATIAGGFLHDVVEDTSVTLEDLKEAFNEEVAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ ++E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K E
Sbjct: 158 EKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELY 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V + +++ +++ NI GR K +YSI+ KM + +EI+D+ +R++V + +
Sbjct: 218 VEEVVNEVKSRVEEVNIK-ADFSGRPKHIYSIYRKMAMQNKQFNEIYDLLAVRILVNSIK 276
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 277 DCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGDPLEVQIRTFEMHEIA 336
Query: 299 EFGFAAHWRYKEG-DCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHW YKEG + S + + W R +L +Q E+
Sbjct: 337 EYGIAAHWAYKEGKNANEDSSFDKKLSWFREILEFQNES 375
>gi|407004719|gb|EKE21022.1| hypothetical protein ACD_7C00380G0002 [uncultured bacterium]
Length = 497
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 216/357 (60%), Gaps = 22/357 (6%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y HC+ TA +LA+IG S +AAGLLHD +D ++ I + FG + +LVE
Sbjct: 43 RKSGEDYFKHCIATANILASIGMGSKTIAAGLLHDVPEDTPITLTEIKKEFGEDIHNLVE 102
Query: 62 GVSKLSQLS-KLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
G++KL ++ K +E + L MFLAMA D R V+IKLADRLHNM TL+ P
Sbjct: 103 GITKLGKIKLKETKEEYLI------ENLRKMFLAMAADIRVVIIKLADRLHNMRTLEFNP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF---DE 176
KR R A+ET+EI+VP+A+RLGI K +LE+L FK ++P + + KL + + E
Sbjct: 157 PEKRPRIARETMEIYVPIADRLGIGEIKAELEDLSFKFIDPKNY-RMVKKLRDDYYKEGE 215
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
AI +LE+ ++ + I + GR K+L S+ K+ K+++ + I+D+ +R++V
Sbjct: 216 KFNNQAIRELEKEIRGRKIKIAKIYGRAKNLRSLFLKLEKREMDIGRIYDLIAIRIVVPT 275
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMH 295
DCY+ L + H+++ + G++KDYI+ PK NGYQS+HT + G EG + +E+QIRT++MH
Sbjct: 276 VSDCYEVLGITHKVYRPMVGRIKDYISLPKPNGYQSIHTTIFGPEGRI-MEIQIRTQKMH 334
Query: 296 LQAEFGFAAHWRYKEGDCQ--------HSSFVLQMVEWARWVLTWQCEAMSKDRSCV 344
+AEFG A+HW Y E + ++ V W + + WQ E +++ +
Sbjct: 335 DEAEFGIASHWIYSENKRRDWKNYFRSKETYSENEVVWLKQLREWQSEIGQDNKTFL 391
>gi|134298601|ref|YP_001112097.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum reducens MI-1]
gi|134051301|gb|ABO49272.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum reducens MI-1]
Length = 721
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 208/338 (61%), Gaps = 11/338 (3%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+ Y++H + A++LA + + VAAGLLHD ++D ++ + I + F +A +V+
Sbjct: 39 RISGEDYIVHPLAIAIILAELQLDVQTVAAGLLHDVVEDTGITLEDIEKNFSLEIATMVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +L +E +A+ L MFLAMA D R +LIKLADRLHN+ TL
Sbjct: 99 GVTKLGKLQFQTKEER------QAENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETL F P+A+RLGI K +LE+L F++L P+Q+ + ++ + E
Sbjct: 153 RKQKEVAEETLHFFTPMAHRLGIYKIKWELEDLSFRYLEPEQYQRMKVQIAKSRAKREEY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I++L L NI + GR K+LYSI+ KM++++ + +I D+ +R++V + +
Sbjct: 213 IQEVIKELAAKLSAVNIKSEI-QGRPKNLYSIYQKMVEQQKELKDIFDVQAVRVLVNSVK 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY +L + H LW +PG+ KDYI PK N YQSLHT V G P+E+QIRT +MH A
Sbjct: 272 DCYGSLGIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPHGEPVEIQIRTWDMHKVA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E+G AAHWRYKEG + F ++ W R +L Q EA
Sbjct: 332 EYGIAAHWRYKEGSQEEKDFDKKLA-WIRQMLDAQHEA 368
>gi|297559818|ref|YP_003678792.1| (p)ppGpp synthetase I SpoT/RelA [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844266|gb|ADH66286.1| (p)ppGpp synthetase I, SpoT/RelA [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 817
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 203/341 (59%), Gaps = 16/341 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G +AA LLHDT++D S + FG +A+LV+
Sbjct: 132 RKSGDPYITHPLAVATILAELGMQEATLAAALLHDTVEDTDYSLGELRSDFGDEIAELVD 191
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP- 119
GV+KL ++ + +A+ + M +AMA D R ++IKL DRLHNM TL LP
Sbjct: 192 GVTKLDKVKY--------GEATQAETVRKMVVAMARDIRVLVIKLCDRLHNMRTLRYLPS 243
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
KR++ A+ETLEIF PLA+RLG++T K +LE+L F L P + E++ + E +
Sbjct: 244 RAKREKKARETLEIFAPLAHRLGMNTIKWELEDLAFATLYPKRFDEIARLVSERAPRRDV 303
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ IE + L++ + V GR K YSI+ KM+ + DEI+D+ +R++V++
Sbjct: 304 YLQEVIEAVSADLRESKLKATVR-GRPKHYYSIYQKMIARNCGFDEIYDLIAVRVLVDSV 362
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY AL +H W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT+ MH +
Sbjct: 363 RDCYAALGTIHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPSGNPVELQIRTRAMHRR 422
Query: 298 AEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YKE + ++W R ++ WQ E
Sbjct: 423 AEYGIAAHWKYKEDRGSGGESKPRGSSDMQWLRQLIDWQQE 463
>gi|161525569|ref|YP_001580581.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia multivorans ATCC
17616]
gi|189349703|ref|YP_001945331.1| GTP pyrophosphokinase [Burkholderia multivorans ATCC 17616]
gi|221213621|ref|ZP_03586595.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Burkholderia
multivorans CGD1]
gi|421478118|ref|ZP_15925888.1| RelA/SpoT family protein [Burkholderia multivorans CF2]
gi|160342998|gb|ABX16084.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia multivorans ATCC
17616]
gi|189333725|dbj|BAG42795.1| GTP pyrophosphokinase [Burkholderia multivorans ATCC 17616]
gi|221166410|gb|EED98882.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Burkholderia
multivorans CGD1]
gi|400225265|gb|EJO55442.1| RelA/SpoT family protein [Burkholderia multivorans CF2]
Length = 788
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 204/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FG VA+LV+
Sbjct: 90 RQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTKSELAERFGPKVAELVD 149
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ +RE +A+ M LAMA D R +L+KLADRLHNM TL A+P+
Sbjct: 150 GLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPM 203
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++ L + K +
Sbjct: 204 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREV 263
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ +E ++A+ D + + GR K++YSI+ KM K+L+ ++ D+YG R++V++
Sbjct: 264 IGKILEAAQRAMADAKLDAEI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDSPL 322
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 323 DCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 382
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + + +W + +L Q EA
Sbjct: 383 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 420
>gi|209519142|ref|ZP_03267947.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. H160]
gi|209500442|gb|EEA00493.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. H160]
Length = 786
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 204/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FGA VA+LV+
Sbjct: 89 RQSGEPYITHPVAVAEICAGWNLDAQAIMAALLHDVMEDQGVTKAELAERFGAKVAELVD 148
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ RE +A+ M LAMA D R +L+KLADRLHNM TL A+P
Sbjct: 149 GLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPP 202
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++ L + K +
Sbjct: 203 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYATLEKAVKAARGNRREV 262
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E +++A+ D + V GR K+++SI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 263 VGKILESVQRAIADAKLDAEV-TGREKTIFSIYKKMRDKQLSFSQVLDVYGFRVVVESAL 321
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 322 ECYTCIGALHALFKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 381
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + + +W + +L Q EA
Sbjct: 382 EAGVAAHWLYKNGSADLNDVQKRAHQWLKSLLDIQSEA 419
>gi|434389540|ref|YP_007100151.1| (p)ppGpp synthetase, RelA/SpoT family [Chamaesiphon minutus PCC
6605]
gi|428020530|gb|AFY96624.1| (p)ppGpp synthetase, RelA/SpoT family [Chamaesiphon minutus PCC
6605]
Length = 779
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/351 (39%), Positives = 201/351 (57%), Gaps = 25/351 (7%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H + A LL +G + ++AAG LHD ++D ++ D I FG A LVE
Sbjct: 80 RKSGEPYICHPIAVAGLLRDLGGGAPMIAAGFLHDVVEDTPITIDQIEAKFGKETAHLVE 139
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS+ ++ K +A+ MF+AMA D R +++KLADRLHNM TLD L
Sbjct: 140 GVTKLSKFE------FSSKKEQQAENFRRMFIAMAQDIRVIVVKLADRLHNMRTLDHLRT 193
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
++Q ++ET +IF PLA+RLG+ K +LE+L FK++ + + + + E E+
Sbjct: 194 ERQQAISQETRDIFAPLADRLGLGRIKWELEDLSFKYIEAEDYRRIQDLVAEKRTARESR 253
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + E + L I+++ + GR K LYSI+ KM +K EI+D+ +R+IVE+
Sbjct: 254 IANVTEMIRHRLDRAKINYVDISGRPKHLYSIYQKMRYQKKEFSEIYDLTAIRIIVESNH 313
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY AL +H + +PG+ KDYI PK N YQSLHT V G PLEVQIRT EMH A
Sbjct: 314 ECYLALAEIHDAFKPIPGRFKDYIGLPKNNRYQSLHTTVVGFTGTPLEVQIRTLEMHHVA 373
Query: 299 EFGFAAHWRYKE----------------GDCQHSSFVLQMVEWARWVLTWQ 333
E+G AAHW+YKE + V + W R +L WQ
Sbjct: 374 EYGIAAHWKYKEAAKADKSGPETSETGKATTNRRTEVDEKFAWLRQLLEWQ 424
>gi|91784884|ref|YP_560090.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Burkholderia xenovorans LB400]
gi|385208471|ref|ZP_10035339.1| (p)ppGpp synthetase, RelA/SpoT family [Burkholderia sp. Ch1-1]
gi|91688838|gb|ABE32038.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Burkholderia xenovorans LB400]
gi|385180809|gb|EIF30085.1| (p)ppGpp synthetase, RelA/SpoT family [Burkholderia sp. Ch1-1]
Length = 785
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 204/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A ++ + A LLHD ++D ++ + FGA VA+LV+
Sbjct: 89 RQSGEPYITHPVAVAEICAGWNLDAQSIMAALLHDVMEDQGVTKAELAERFGAKVAELVD 148
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ RE +A+ M LAMA D R +L+KLADRLHNM TL A+P
Sbjct: 149 GLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPA 202
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++ L + K +
Sbjct: 203 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYATLEKAVKAARGNRREV 262
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E +++A+ D + V GR K+++SI+ KM K+L+ ++ D+YG R++VE+
Sbjct: 263 VGKILESVQRAIADAKLDAEV-TGREKTIFSIYKKMRDKQLSFSQVLDVYGFRVVVESAL 321
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 322 ECYTCIGALHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 381
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + + +W + +L Q EA
Sbjct: 382 EAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 419
>gi|332637871|ref|ZP_08416734.1| GTP pyrophosphokinase [Weissella cibaria KACC 11862]
Length = 744
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 199/314 (63%), Gaps = 9/314 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +LA + + V AG LHD ++D + + + R FG VA +V+
Sbjct: 44 RKSGEPYIIHPIQVAGILADLHMDPDTVVAGYLHDVVEDTDATLEDVEREFGHDVAVIVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKLS++ +S+ A+ + LAM+ D R +++KLADRLHNM TL AL
Sbjct: 104 GVSKLSKIEY------KSSREQLAENHRKLLLAMSHDIRVIIVKLADRLHNMRTLSALRE 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAM-- 178
K++R A ETLEI+ PLA+RLGI T K +LE++ ++L P+ + +++ + E +
Sbjct: 158 EKQKRIASETLEIYAPLADRLGIMTIKWELEDMSLRYLEPEAYHDIAKSMQLRRQERLEI 217
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V A++ +E A+ + ++ + GR K +YSI+ KM+ KK DEI+D+ +R++V+
Sbjct: 218 VDQAVDDIEHAITELHLKHAEVYGRPKHIYSIYRKMVDKKKKFDEIYDLLAIRVLVDTIP 277
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+ Y L +H W +PG+ KDYI PK NGYQSLHT V G G PLEVQIRT +MH A
Sbjct: 278 ETYAVLGAIHARWTPMPGRFKDYIALPKANGYQSLHTSVIGPGGRPLEVQIRTYQMHEVA 337
Query: 299 EFGFAAHWRYKEGD 312
EFG AAHW YKEG+
Sbjct: 338 EFGVAAHWAYKEGN 351
>gi|291458831|ref|ZP_06598221.1| GTP diphosphokinase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418085|gb|EFE91804.1| GTP diphosphokinase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 753
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 213/340 (62%), Gaps = 16/340 (4%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H + A++LA + + +AAGLLHD ++D ++ + + F VA LV+
Sbjct: 58 RKSGEPYIIHPICVAIILADLQMDRETIAAGLLHDVVEDTGMTLQELEKEFNPDVALLVD 117
Query: 62 GVSKLSQLSKLARENNTASKTVE--ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
GV+KL+Q+ N VE A+ L MF++MA D R V+IKLADRLHN+ TL+
Sbjct: 118 GVTKLTQI-------NLDVDKVEQQAENLRKMFVSMAKDIRVVIIKLADRLHNLRTLEYQ 170
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDE 176
KR+ A+E+L+I+ PLA+RLGIS K+++++L K+L PD + +L K+ E
Sbjct: 171 SPEKRKEKARESLDIYSPLADRLGISKIKIEMDDLSLKYLEPDVYYDLVEKVHFKREARE 230
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A + ++ + + L D+ + + GR K +SI+ KM+ + T+D+I+D++ +R+IV+
Sbjct: 231 ARIGHIVKDVSKYLHDRGVEAEI-KGRVKHFFSIYRKMVNQNKTIDQIYDLFAIRIIVKT 289
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY +L +H+++ +PG+ KDYI PK N YQSLHT V E VP EVQIRT+EMH
Sbjct: 290 LGDCYASLGYIHKMYHPIPGRFKDYIAMPKANMYQSLHTTVIDEEGVPFEVQIRTEEMHR 349
Query: 297 QAEFGFAAHWRYKE--GDCQHSSFV-LQMVEWARWVLTWQ 333
AE G AAHW+YKE G + +S L + W +L WQ
Sbjct: 350 TAEVGIAAHWKYKEQGGSGEKASEAELAKMNWLHQILEWQ 389
>gi|317131341|ref|YP_004090655.1| (p)ppGpp synthetase I SpoT/RelA [Ethanoligenens harbinense YUAN-3]
gi|315469320|gb|ADU25924.1| (p)ppGpp synthetase I, SpoT/RelA [Ethanoligenens harbinense YUAN-3]
Length = 729
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 212/340 (62%), Gaps = 12/340 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SGDPY++H V A +L +G ++ + A LLHD ++D + + I + FG+ VA LV
Sbjct: 39 FRKSGDPYIIHPVAVATILVNLGLDTDSLCAALLHDVVEDTGVPLENIRKQFGSDVALLV 98
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+K+ +++ +RE +A+ + M LAMA D R +LIKLADRLHNM TLDA+
Sbjct: 99 DGVTKVGRVAHYSREEQ------QAESIRKMLLAMAKDIRVILIKLADRLHNMRTLDAMT 152
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--A 177
K+ + T+E++ P+A+RLGI T K +LE+L +HL+P + E+ L + DE A
Sbjct: 153 SQKQLDISLGTMEVYAPIAHRLGIRTVKDELEDLSIRHLDPVAYHEIEVALKKRKDEREA 212
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ S ++ + L+ +++ + GR KS+Y I+ K+ K ++I+DIY +R+IV+
Sbjct: 213 ILQSIQNRIAERLQSLHMNVHI-EGRVKSIYGIYRKVYMKGRAFEQIYDIYAVRVIVDTV 271
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY L V+H L VPG+ KDYI+ PK N YQSLHT V G+ VP+EVQIRT +MH
Sbjct: 272 NECYNILGVIHDLMKPVPGRFKDYISTPKPNMYQSLHTTVIGKEGVPIEVQIRTWDMHHT 331
Query: 298 AEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 335
AE+G AAHW+YK G + + +EW R +L Q +
Sbjct: 332 AEYGIAAHWKYKLGIQSSKDKGSLESRLEWVRQLLEVQTD 371
>gi|427737096|ref|YP_007056640.1| RelA/SpoT family (p)ppGpp synthetase [Rivularia sp. PCC 7116]
gi|427372137|gb|AFY56093.1| (p)ppGpp synthetase, RelA/SpoT family [Rivularia sp. PCC 7116]
Length = 805
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 207/340 (60%), Gaps = 14/340 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY+ H V A +L +G +S ++AAG LHD ++D ++ + I FG V LV
Sbjct: 107 MRKSGEPYICHPVAVAGILRDLGGSSVMIAAGFLHDVVEDTEITIEEIEERFGEEVRRLV 166
Query: 61 EGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
EGV+KLS++ N SKT +A+ MFLAMA D R +++KLADRLHNM TL+A+
Sbjct: 167 EGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEAM 219
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDE 176
P KR+ A ET EIF PLANRLGI K +LE+L FK+L D + ++ + + E
Sbjct: 220 PEHKRRAKALETREIFAPLANRLGIWHVKWELEDLAFKYLETDSYRQIQQLVADKRAARE 279
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+T+ E L LK I + L GR K LYSI+ KM ++ EI D+ LR+IV+
Sbjct: 280 ERLTNVTETLRSRLKKAGIECVDLSGRPKHLYSIYQKMQRQNKEFHEIFDLAALRIIVKT 339
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
E+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH
Sbjct: 340 NEECYRALALVHDSFRPIPGRFKDYIGLPKPNRYQSLHTGVIGPWGRPMEVQIRTLEMHR 399
Query: 297 QAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQ 333
AE+G AAHW YKE ++ + E W R +L WQ
Sbjct: 400 IAEYGIAAHWIYKESGGSSNTQLTAADEKFTWLRQLLEWQ 439
>gi|163782986|ref|ZP_02177981.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881666|gb|EDP75175.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
Length = 702
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 200/316 (63%), Gaps = 13/316 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H +E A LA + +ST V AGLLHDTL+D +Y+ I FG VAD+V
Sbjct: 41 LRKSGEPYVIHPLEVAKTLAELNMDSTTVIAGLLHDTLEDTDTTYEEIEELFGKDVADIV 100
Query: 61 EGVSKLSQLS-KLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDAL 118
EGV+K+ ++ K RE +A+ + LA A D R V++KLADRLHNM TL+ L
Sbjct: 101 EGVTKIGKIKFKNLRE-------AQAENFRKLILATAKDIRVVVVKLADRLHNMKTLNHL 153
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS---SKLVECFD 175
KR R A+ETLE++ P+A+RLGI K LE+L FK+L P ++ + S+ +E +
Sbjct: 154 RRDKRIRIAEETLEVYAPIAHRLGIWEIKRSLEDLSFKYLYPKEYERVRKFVSQSLEDLE 213
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
+ I K+ + +K I V R K LYSI K ++K + ++E+HD+ G+R+IV+
Sbjct: 214 VYLKKFVIPKVREEIKKAGIKAEVTY-RPKHLYSIWQKTIRKNIGLEEVHDLLGVRIIVD 272
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
++CY L ++H L+ VPGK KDYI+ PK N YQSLHT V +E QIRT+EMH
Sbjct: 273 TIQECYVVLGLIHSLFKPVPGKFKDYISLPKPNLYQSLHTTVVAPKGRMVEFQIRTREMH 332
Query: 296 LQAEFGFAAHWRYKEG 311
L+AE G AAHW YKEG
Sbjct: 333 LRAERGIAAHWAYKEG 348
>gi|357402877|ref|YP_004914802.1| GTP pyrophosphokinase (RelA/SpoT) [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|337769286|emb|CCB77999.1| GTP pyrophosphokinase (RelA/SpoT) [Streptomyces cattleya NRRL 8057
= DSM 46488]
Length = 820
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 209/353 (59%), Gaps = 31/353 (8%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + +LA +G + + AGLLHDT++D D + R FG VA LV+
Sbjct: 120 RKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDALRRDFGEQVALLVD 179
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AMA D R ++IKLADRLHNM T+ L
Sbjct: 180 GVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLADRLHNMRTMRYLKR 231
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF---DE- 176
K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+ + E DE
Sbjct: 232 EKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEIVRLVAERAPKRDEY 291
Query: 177 -AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
A+VT ++++Q L+ I V GR K YS++ KM+ + EI+D+ G+R++V+
Sbjct: 292 LAVVT---DQVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDFAEIYDLVGIRVLVD 347
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
DCY AL +H W VPG+ KDYI PKFN YQSLHT V G G P+E+QIRT +MH
Sbjct: 348 TVRDCYAALGTIHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPGGKPVELQIRTFDMH 407
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARWVLTWQCE 335
+AE+G AAHW+YK+ +S V + + W R +L WQ E
Sbjct: 408 RRAEYGIAAHWKYKQDAVAGASKVRTDGPKSAKADDAVNDMAWLRQLLDWQKE 460
>gi|406986311|gb|EKE06927.1| hypothetical protein ACD_18C00232G0001 [uncultured bacterium]
Length = 494
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/342 (39%), Positives = 202/342 (59%), Gaps = 13/342 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H + A +LA + + ++ A LLHD +D + + + + FG +A LV
Sbjct: 41 FRKSGEPYIVHPLAAAYILAEMSIDPVIIMATLLHDVPEDTDKTLEDLEKNFGKEIASLV 100
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EG++KL +L E + L MF+AMA D R ++IK ADR+HN+ TLDALP
Sbjct: 101 EGITKLGKLKYRGVERYI-------ENLRKMFIAMAEDVRVMIIKFADRIHNLTTLDALP 153
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
KR R A E+LEI+ P+ANRLG+ K QLE+L FK + P ++ + E E
Sbjct: 154 PQKRYRIALESLEIYAPIANRLGMDEMKGQLEDLSFKFVYPKEYERVKKMRDEKLQGKEK 213
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
I ++ L++ NIS + + GR+K LYS++ K++ K + I+DI +R+IV+N
Sbjct: 214 YFKHIINITQKELENSNISIISIHGRNKKLYSLYKKLIDKNNELGRIYDIVAIRIIVDNV 273
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
CY L ++H +W + G++KDYI +PK NGYQSLHT V EG P+E QIRT EM+
Sbjct: 274 AKCYATLGILHSIWKPIKGRIKDYIAQPKPNGYQSLHTTVFAEGGEPVEFQIRTLEMNED 333
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 339
AE+G AAHW Y E + + ++W + + Q + ++K
Sbjct: 334 AEYGIAAHWHYDENGSRRPE---KDIKWVQELAQIQKDILNK 372
>gi|88797492|ref|ZP_01113081.1| RelA/SpoT protein [Reinekea blandensis MED297]
gi|88779664|gb|EAR10850.1| RelA/SpoT protein [Reinekea sp. MED297]
Length = 700
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 208/342 (60%), Gaps = 16/342 (4%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+ Y+ H + A +L+ + + + A +LHD L+D +S D I FG GVA+LV
Sbjct: 38 MRRSGERYITHPLAVANILSEMHMDHQSIMAAMLHDVLEDTAVSKDAIIEQFGEGVAELV 97
Query: 61 EGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLD 116
+GVSKL+ L SKL + A+ M LAM+ D R +L+KLADRLHNM T+
Sbjct: 98 DGVSKLTHLEFESKLEEQ---------AENFQKMVLAMSKDIRVILVKLADRLHNMRTMG 148
Query: 117 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE 176
A+P K++R ++ETLEI+ P+A RLGI+ +V+LENL F+++ P + + + S + +
Sbjct: 149 AMPPEKKRRKSRETLEIYAPIALRLGINDMRVELENLAFENMYPLRASRIQSAIKKQIGA 208
Query: 177 AMVTSA-IEKLEQA-LKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 234
T A IE QA L D+ I+ V GR K L+SI+ KM +K+ ++ EI D+Y R+I
Sbjct: 209 RKETVAHIEGALQARLLDEGINANV-NGRQKHLFSIYQKMREKRKSLKEILDVYAFRIIT 267
Query: 235 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 294
++ + CY+ L +VH L+ VP + KDYI PK NGYQSLHT + G VP+E+QIRT+EM
Sbjct: 268 DSVDSCYRILGIVHNLYKPVPNRFKDYIAVPKINGYQSLHTTLIGANGVPMEIQIRTREM 327
Query: 295 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
A G AAHW YK + Q S + W + +L Q A
Sbjct: 328 EDMANHGIAAHWLYKTDETQSSQTHARARRWVKNLLEMQERA 369
>gi|410637546|ref|ZP_11348124.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Glaciecola lipolytica E3]
gi|410142908|dbj|GAC15329.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Glaciecola lipolytica E3]
Length = 705
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 210/343 (61%), Gaps = 12/343 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR+SGDPY+ H V A +LA + + + + LLHD ++D S D + R FG V DLV
Sbjct: 38 MRSSGDPYITHPVAVAGILADMHLDEETIKSALLHDVIEDTHYSKDDLVREFGETVGDLV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGVSKL ++ ++ + +A+ M +AM D R +LIKLADR HNM TL +L
Sbjct: 98 EGVSKLDKIQ------FSSKQEAQAENFRKMMMAMVQDIRVILIKLADRTHNMRTLGSLR 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
KR+R A+ETLEI+ P+A+RLGI K +LE+L F+ + P +H LS+ K +
Sbjct: 152 PDKRRRIARETLEIYAPIAHRLGIHDIKNELEDLGFQAMYPMRHRALSAAVKQARGNRKE 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ + E++E LK ++ V+ GR K LYSI+ KM K+L +E+ DIY R+IV++
Sbjct: 212 IIENTREEVETRLKANGLNGQVV-GREKHLYSIYRKMKNKELLFNEVMDIYAFRVIVDSV 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+AL +H L+ + G+ KDY+ P+ NGYQSLHT + G +P+E+QIRT EM
Sbjct: 271 DSCYRALGAMHGLYKPIEGRFKDYVAIPRTNGYQSLHTSLIGPHGIPVEIQIRTAEMDQM 330
Query: 298 AEFGFAAHWRYK-EGDCQHSSFV-LQMVEWARWVLTWQCEAMS 338
A+ G AAHW YK +G+ Q + ++ +W + +L Q A S
Sbjct: 331 ADKGVAAHWIYKDDGETQQGTTAQVRARKWMQSLLELQQSASS 373
>gi|227833235|ref|YP_002834942.1| GTP pyrophosphokinase [Corynebacterium aurimucosum ATCC 700975]
gi|262184221|ref|ZP_06043642.1| GTP pyrophosphokinase [Corynebacterium aurimucosum ATCC 700975]
gi|227454251|gb|ACP33004.1| GTP pyrophosphokinase [Corynebacterium aurimucosum ATCC 700975]
Length = 765
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 209/343 (60%), Gaps = 18/343 (5%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY+ H + A + A IG ++T VAA LLHDT++D S + + R FG VA LV
Sbjct: 72 FRKSGEPYITHPLAVATIAAEIGMDTTTVAAALLHDTVEDTDYSLEDLTRDFGPEVARLV 131
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL +++ A EA+ + M +AMA D R ++IK+ DRLHNM T+ LP
Sbjct: 132 DGVTKLDKVALGA--------AAEAETIRKMIVAMATDPRVLVIKVCDRLHNMRTMRFLP 183
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE---CFDE 176
K+ + A++TL++ PLA+RLG+++ K +LE+L F L P ++ E+ + + D
Sbjct: 184 PEKQAKKARQTLDVIAPLAHRLGMASVKWELEDLAFAILYPKKYDEIVRMVADRAPSRDR 243
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
A+ ++ QALK I ++ GR K +SI+ KM+ + EI D+ G+R++V++
Sbjct: 244 AL-KEIKAQVGQALKANGIEAEIM-GRPKHYWSIYQKMIVRGRDFAEIFDLVGIRILVDD 301
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
CY A+ VVH L+ +PG+ KDYI+ P+F YQSLHT V G G LEVQ+RT EMH
Sbjct: 302 INSCYAAIGVVHSLYQALPGRFKDYISSPRFGVYQSLHTTVIGAGGSTLEVQVRTHEMHY 361
Query: 297 QAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEA 336
AEFG AAHWRYKE + H V QM W R +L WQ EA
Sbjct: 362 NAEFGVAAHWRYKETKGKNSGHQEEVDQMA-WMRQLLDWQKEA 403
>gi|307730696|ref|YP_003907920.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia sp. CCGE1003]
gi|307585231|gb|ADN58629.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. CCGE1003]
Length = 786
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 203/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A + + A LLHD ++D ++ + FGA VA+LV+
Sbjct: 89 RQSGEPYITHPVAVAEICAGWNLDGQAIMAALLHDVMEDQGVTKAELAERFGAKVAELVD 148
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ RE +A+ M LAMA D R +L+KLADRLHNM TL A+P
Sbjct: 149 GLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPP 202
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++ L + K +
Sbjct: 203 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYATLEKAVKAARGNRREV 262
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E +++A+ D I V GR K+++SI+ KM K+L+ ++ D+YG R++V++
Sbjct: 263 VGKILESVQRAIADAKIDAEV-TGREKTIFSIYKKMRDKQLSFSQVLDVYGFRVVVDSAL 321
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 322 ECYTCIGALHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 381
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + + +W + +L Q EA
Sbjct: 382 EAGVAAHWLYKNGSADLNDVQKRAHQWLKSLLDIQSEA 419
>gi|111221581|ref|YP_712375.1| GTP pyrophosphokinase [Frankia alni ACN14a]
gi|111149113|emb|CAJ60796.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Frankia alni
ACN14a]
Length = 737
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 212/356 (59%), Gaps = 30/356 (8%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG PY+ H + A +LA +G ++ ++A LLHDTL++ LS + I TFG +A +V
Sbjct: 32 VRFSGHPYITHPIAVASILADLGMDTPTLSAALLHDTLEETSLSAEAIRETFGDQIALIV 91
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+ VSKL+++ + +A+ + M +AMA D RA+++KLADRLHNM TL LP
Sbjct: 92 DAVSKLNRVK--------VGEAAQAETIRRMVVAMARDPRALVVKLADRLHNMRTLRFLP 143
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEA 177
K++R A+ETLE++ PLA+RLG+++ K +LE+L F L P ++ E+ + + +
Sbjct: 144 EHKQERKARETLEVYAPLAHRLGMNSLKWELEDLAFAALYPKRYDEIVRLVADRAPSRDV 203
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
+ I +++ L+D I V+ GR K YSI+ KM+ + + D+I+D+ G+R++V++
Sbjct: 204 YLAEVIGQVQAGLRDARIR-AVVSGRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVDSV 262
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
DCY L VH W +PG+ KDYI PKFN YQSLHT V G P+E+QIRT MH +
Sbjct: 263 RDCYATLGTVHANWKPIPGRFKDYIAMPKFNMYQSLHTTVIGPEGKPVELQIRTHAMHNR 322
Query: 298 AEFGFAAHWRYKE-GDCQHSSFVL-----------------QMVEWARWVLTWQCE 335
AE+G AAHW+YKE G S ++ W R VL WQ E
Sbjct: 323 AEYGIAAHWKYKEDGVAARPSAAAVDSGGGRSGRRRGSPEPDLMSWLRQVLDWQRE 378
>gi|82523943|emb|CAI78665.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[uncultured delta proteobacterium]
Length = 713
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/316 (44%), Positives = 203/316 (64%), Gaps = 12/316 (3%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PYL H +E A +LA + ++ + +GLLHDT++D + + + FG VA LV
Sbjct: 38 VRLSGEPYLTHPMEVAGILADMKMDAATIISGLLHDTVEDTLSTVEQVEEEFGKDVAFLV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
G++KLS +S ++E +A+ M LAM+ D R +L++LADR+HNM TL P
Sbjct: 98 SGLTKLSLISFRSQEER------QAENFRKMILAMSSDIRILLVRLADRIHNMRTLQYQP 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA-M 178
L KR A+ET++++ PLANRLGI+ K +LE+L F++L+P+ + ELS ++V+ +
Sbjct: 152 LEKRVYIARETIDVYAPLANRLGINWIKTELEDLSFQYLSPEAYNELSMRVVQSNESRHR 211
Query: 179 VTSAIEKL-EQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
T ++KL + LK I V GR K LY I+ KM ++ L DE++D+ R+I++++
Sbjct: 212 YTEEVKKLISEELKKFKIEGEV-EGRAKHLYGIYKKMHEQHLNFDEVYDLIAFRVILDSD 270
Query: 238 ED--CYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
++ CY+ L VVH LW VPG+ KDYI PK N YQSLHT V G LE+QIRT+ MH
Sbjct: 271 QEKGCYETLSVVHSLWKPVPGRFKDYIAMPKANNYQSLHTTVIGPYGERLEIQIRTRAMH 330
Query: 296 LQAEFGFAAHWRYKEG 311
AE G AAHWRYKEG
Sbjct: 331 EWAEKGIAAHWRYKEG 346
>gi|323527032|ref|YP_004229185.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia sp. CCGE1001]
gi|323384034|gb|ADX56125.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. CCGE1001]
Length = 786
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 203/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A + + A LLHD ++D ++ + FGA VA+LV+
Sbjct: 89 RQSGEPYITHPVAVAEICAGWNLDGQAIMAALLHDVMEDQGVTKAELAERFGAKVAELVD 148
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ RE +A+ M LAMA D R +L+KLADRLHNM TL A+P
Sbjct: 149 GLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPP 202
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++ L + K +
Sbjct: 203 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYATLEKAVKAARGNRREV 262
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E +++A+ D I V GR K+++SI+ KM K+L+ ++ D+YG R++V++
Sbjct: 263 VGKILESVQRAIADAKIDAEV-TGREKTIFSIYKKMRDKQLSFSQVLDVYGFRVVVDSAL 321
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 322 ECYTCIGALHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 381
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + + +W + +L Q EA
Sbjct: 382 EAGVAAHWLYKNGSADLNDVQKRAHQWLKSLLDIQSEA 419
>gi|378717723|ref|YP_005282612.1| GTP pyrophosphokinase RelA [Gordonia polyisoprenivorans VH2]
gi|375752426|gb|AFA73246.1| GTP pyrophosphokinase RelA [Gordonia polyisoprenivorans VH2]
Length = 801
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 205/344 (59%), Gaps = 18/344 (5%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + A +LA +G ++ + A LLHDT++D S + + FGA V LV+
Sbjct: 110 RKSGDPYITHPLAVATILADLGMDTITLVAALLHDTVEDTGYSLEQLESEFGAEVTHLVD 169
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL +++ EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 170 GVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPP 221
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+ + + +
Sbjct: 222 EKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIVRLVADRAPSRDTY 281
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + AL I+ V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 282 LARVRADINNALSSARITATV-EGRPKHYWSIYQKMIVKGREFDDIHDLVGMRILCDEVR 340
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PLEVQIRT +MH A
Sbjct: 341 DCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPLEVQIRTYDMHRTA 400
Query: 299 EFGFAAHWRYKEGDCQ----HSSFVLQM--VEWARWVLTWQCEA 336
EFG AAHWRYKE + S V ++ + W R +L WQ EA
Sbjct: 401 EFGIAAHWRYKESGYKDRKGRKSDVAEVDDMAWMRQLLDWQREA 444
>gi|335428878|ref|ZP_08555788.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|335429314|ref|ZP_08556213.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|334890012|gb|EGM28294.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|334891819|gb|EGM30065.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
Length = 727
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 224/387 (57%), Gaps = 28/387 (7%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SG+PY++H +E +++L + A +AAGL+HD L+D ++ + + FG + LV
Sbjct: 43 IRKSGEPYIIHPIEVSLILTSFHAGPKTIAAGLMHDVLEDTEVTEEEMADLFGNEITTLV 102
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL Q+ +++E +A MFLAMA D R ++IKLADRLHNM TL +P
Sbjct: 103 DGVTKLGQIKYVSKEQ------AQAKNHQKMFLAMAKDIRVIIIKLADRLHNMRTLKHMP 156
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS----KLVECFD 175
K+ R +KETL IF P+A+RLG+ K +LE+ C + ++P+++ ++S K E D
Sbjct: 157 RHKQVRISKETLGIFAPIAHRLGMYRLKSELEDRCLRFIDPEEYYYIASLINTKQRERED 216
Query: 176 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
+ + S I +++ LK+++I F + GR K+++S+H KM +K EI D+ LR+IV+
Sbjct: 217 D--IDSIINEIKGCLKEQDIKF-AIKGRIKNIFSVHKKMREKNKEFSEIFDLLALRIIVD 273
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+E CYQ L ++H W +P + KDYI PK N YQSLHT + EVQIRT EM
Sbjct: 274 DEASCYQVLGLIHSNWKPIPKRFKDYIAMPKPNMYQSLHTTIIALNGKIFEVQIRTNEMD 333
Query: 296 LQAEFGFAAHWRYKEGDC----QHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIK 351
L AE+G AAHW YKE + Q + + ++W R ++ + + ++D + D I
Sbjct: 334 LVAEYGVAAHWAYKESEAHTAEQEQVEIQKKLKWYREMVEYSENSDAEDFMELIKDDIIS 393
Query: 352 PPC----------TFPSHADDCPFSYK 368
FP+ A F+Y+
Sbjct: 394 ANVYVFTPEGDVLDFPNGATPIDFAYR 420
>gi|170693642|ref|ZP_02884800.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia graminis C4D1M]
gi|170141424|gb|EDT09594.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia graminis C4D1M]
Length = 787
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 203/338 (60%), Gaps = 10/338 (2%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY+ H V A + A + + A LLHD ++D ++ + FGA VA+LV+
Sbjct: 89 RQSGEPYITHPVAVAEICAGWNLDGQAIMAALLHDVMEDQGVTKAELAERFGAKVAELVD 148
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
G+SKL ++ RE +A+ M LAMA D R +L+KLADRLHNM TL A+P
Sbjct: 149 GLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPP 202
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAM 178
KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP ++ L + K +
Sbjct: 203 EKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPHRYATLEKAVKAARGNRREV 262
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
V +E +++A+ D I V GR K+++SI+ KM K+L+ ++ D+YG R++V++
Sbjct: 263 VGKILESVQRAIADAKIDAEV-TGREKTIFSIYKKMRDKQLSFSQVLDVYGFRVVVDSAL 321
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
+CY + +H L+ VPGK KDYI PK NGYQSLHT + G P+E Q+RT++MH A
Sbjct: 322 ECYTCIGALHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFGAPIEFQVRTRKMHEIA 381
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
E G AAHW YK G + + +W + +L Q EA
Sbjct: 382 EAGVAAHWLYKNGSADLNDVQKRAHQWLKSLLDIQSEA 419
>gi|408533281|emb|CCK31455.1| GTP pyrophosphokinase [Streptomyces davawensis JCM 4913]
Length = 847
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 208/354 (58%), Gaps = 32/354 (9%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SGDPY+ H + +LA +G + + AGLLHDT++D D + R FG VA LV+
Sbjct: 144 RKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDQLRRDFGDSVALLVD 203
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + +A+ + M +AMA D R ++IKLADRLHNM T+ L
Sbjct: 204 GVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLADRLHNMRTMRYLKR 255
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF---DE- 176
K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+ + E DE
Sbjct: 256 EKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEIVRLVAERAPKRDEY 315
Query: 177 -AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
A+VT ++++Q L+ I V GR K YS++ KM+ + EI+D+ G+R++V+
Sbjct: 316 LAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDFAEIYDLVGIRVLVD 371
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
DCY AL VH W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT +MH
Sbjct: 372 TVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPNGKPVELQIRTFDMH 431
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWARWVLTWQCE 335
+AE+G AAHW+YK+ +S V L + W R +L WQ E
Sbjct: 432 RRAEYGIAAHWKYKQEAVAGASKVRTDVPKAGKGKDDHLNDMAWLRQLLDWQKE 485
>gi|398348042|ref|ZP_10532745.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
broomii str. 5399]
Length = 674
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 240/449 (53%), Gaps = 46/449 (10%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
R SG+PY++H ++ +L +G + V++AG+LHD ++D + + + FG + LV
Sbjct: 44 FRLSGEPYIVHPLQVGYILYELGLDEKVISAGILHDVIEDTKYTRENMVSDFGTEITQLV 103
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDALP 119
EGV+K+S++ +RE T A+ + + +A + D R +LIKLAD+ HNM TL P
Sbjct: 104 EGVTKISEIKSQSRE------TEAAENIRKIIIATIQDIRVILIKLADKTHNMRTLSFQP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 179
K++R A ETL ++ P+A RLGI K +LE+L F+ + P+++ ++ ++ ++
Sbjct: 158 PEKQRRIANETLSLYAPIAGRLGIYKVKSELEDLAFQVIYPEEYQDIKKRI--NVKKSER 215
Query: 180 TSAIEKLEQALKDK----NISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 235
I+KL+ LK + NI+ V GR K +SI+ KM K+ T DEI D+ +R+I +
Sbjct: 216 EEYIDKLQIILKQRLAEININAQV-DGRAKHFFSIYRKMKTKEKTFDEIFDLRAIRIITD 274
Query: 236 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 295
+DCY L +VH LW VPG+ KDYI PK N YQSLHT V G PLEVQIRT EM+
Sbjct: 275 EIKDCYGVLGIVHTLWTPVPGRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTAEMN 334
Query: 296 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCT 355
AEFG AAHW YKEG H++ V+W + +WQ DS P
Sbjct: 335 AIAEFGIAAHWVYKEGKT-HANERHLTVKWLEVLQSWQ--------------DSALDPKE 379
Query: 356 FPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRG------S 409
F ++ + H+ VFV K + + P +TV+D R
Sbjct: 380 F---LEELKYDL-----HEDEVFVF---TPKGEIIQLPKGATVLDFAFRIHTDVGLHCKG 428
Query: 410 SRWSPYGFPLKEELRPRLNHKAVGDPRCK 438
++ + PL+ ELR + V D R K
Sbjct: 429 AKINNRMIPLRTELRSGDQVEVVVDKRSK 457
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,570,544,236
Number of Sequences: 23463169
Number of extensions: 307819692
Number of successful extensions: 694878
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5524
Number of HSP's successfully gapped in prelim test: 1695
Number of HSP's that attempted gapping in prelim test: 674951
Number of HSP's gapped (non-prelim): 7551
length of query: 488
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 341
effective length of database: 8,910,109,524
effective search space: 3038347347684
effective search space used: 3038347347684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)