BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 011346
         (488 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1TIC|A Chain A, Conformational Lability Of Lipases Observed In The Absence
           Of An Oil-Water Interface: Crystallographic Studies Of
           Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
           Delemar
 pdb|1TIC|B Chain B, Conformational Lability Of Lipases Observed In The Absence
           Of An Oil-Water Interface: Crystallographic Studies Of
           Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
           Delemar
 pdb|1LGY|A Chain A, Lipase Ii From Rhizopus Niveus
 pdb|1LGY|B Chain B, Lipase Ii From Rhizopus Niveus
 pdb|1LGY|C Chain C, Lipase Ii From Rhizopus Niveus
          Length = 269

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 162 GYYVGIDPRKKLVILGIRGTHTVYDLITDIVSSGSEEVTFEGYSTHFGTAEAARWFLNHE 221
           GY +  D ++K + L  RGT++    ITDIV + S+    +G   H G   +    +N  
Sbjct: 65  GYVLRSD-KQKTIYLVFRGTNSFRSAITDIVFNFSDYKPVKGAKVHAGFLSSYEQVVNDY 123

Query: 222 MGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKK 259
              +++ L +H  +++ + GHSLGGA   L  M L ++
Sbjct: 124 FPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDLYQR 161


>pdb|1TIA|A Chain A, An Unusual Buried Polar Cluster In A Family Of Fungal
           Lipases
          Length = 279

 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 155 NSSVMRPGYYVGIDPRKKLVILGIRGTHTVYDLITDIVSSGSEEVTFEGYSTHFGTAEAA 214
           +S++     Y+ +D     V+L  RG+++V + + D     +     +G     G   + 
Sbjct: 57  DSTITDTAGYIAVDHTNSAVVLAFRGSYSVRNWVADATFVHTNPGLCDGCLAELGFWSSW 116

Query: 215 RWFLNHEMGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKKSFKELGFSPDIVTAV 274
           +   +  +  +++ +  +  + L +VGHSLG A+ +L A  LR K +             
Sbjct: 117 KLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLRGKGYPSAKL-------Y 169

Query: 275 AYATPPCVSRELAE 288
           AYA+P   +  LA+
Sbjct: 170 AYASPRVGNAALAK 183


>pdb|3O0D|A Chain A, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
           At 1.7 A Resolution
 pdb|3O0D|B Chain B, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
           At 1.7 A Resolution
 pdb|3O0D|C Chain C, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
           At 1.7 A Resolution
 pdb|3O0D|D Chain D, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
           At 1.7 A Resolution
 pdb|3O0D|E Chain E, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
           At 1.7 A Resolution
 pdb|3O0D|F Chain F, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
           At 1.7 A Resolution
 pdb|3O0D|G Chain G, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
           At 1.7 A Resolution
          Length = 301

 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 17/121 (14%)

Query: 164 YVGIDPRKKLVILGIRGTHTVYDLITDI------------VSSGSEEVTFEGYSTHFGTA 211
           Y+ +D   K + L IRGTH++ D+ITDI             ++ S   T +    H G  
Sbjct: 71  YLAVDHASKQIYLVIRGTHSLEDVITDIRIMQAPLTNFDLAANISSTATCDDCLVHNGFI 130

Query: 212 EAARWFLNHEMGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKKSFKELGFSPDIV 271
           ++     N     +   +E +  +++ + GHSLGGA   L  + L+       G  P +V
Sbjct: 131 QSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINLKVN-----GHDPLVV 185

Query: 272 T 272
           T
Sbjct: 186 T 186


>pdb|3NGM|A Chain A, Crystal Structure Of Lipase From Gibberella Zeae
 pdb|3NGM|B Chain B, Crystal Structure Of Lipase From Gibberella Zeae
 pdb|3NGM|C Chain C, Crystal Structure Of Lipase From Gibberella Zeae
 pdb|3NGM|D Chain D, Crystal Structure Of Lipase From Gibberella Zeae
          Length = 319

 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 10/127 (7%)

Query: 162 GYYVGIDPRKKLVILGIRGTHTVYDLITDIVSSGSEEVTFEGYSTHFGTAEAARWFLNHE 221
           G YV  DP +K +++  RG+  + + +T++     +     G   H G   A        
Sbjct: 63  GGYVATDPTRKEIVVSFRGSINIRNWLTNLDFDQDDCSLTSGCGVHSGFQNAWNEISAAA 122

Query: 222 MGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKKSFKELGFSP-DIVTAVAYATPP 280
              + +  +++  F++  VGHSLGGA+ +L    LR      +G +P DI T   Y +P 
Sbjct: 123 TAAVAKARKANPSFKVVSVGHSLGGAVATLAGANLR------IGGTPLDIYT---YGSPR 173

Query: 281 CVSRELA 287
             + +LA
Sbjct: 174 VGNTQLA 180


>pdb|1DT3|A Chain A, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DT3|B Chain B, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DT5|A Chain A, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DT5|B Chain B, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DT5|C Chain C, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DT5|D Chain D, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DT5|E Chain E, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DT5|F Chain F, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DT5|G Chain G, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DT5|H Chain H, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DTE|A Chain A, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DTE|B Chain B, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1DU4|A Chain A, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase Other Structure
           Details
 pdb|1DU4|B Chain B, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase Other Structure
           Details
 pdb|1DU4|C Chain C, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase Other Structure
           Details
 pdb|1DU4|D Chain D, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase Other Structure
           Details
 pdb|1EIN|A Chain A, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1EIN|B Chain B, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1EIN|C Chain C, The Structural Origins Of Interfacial Activation In
           Thermomyces (Humicola) Lanuginosa Lipase
 pdb|1TIB|A Chain A, Conformational Lability Of Lipases Observed In The Absence
           Of An Oil-Water Interface: Crystallographic Studies Of
           Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
           Delemar
 pdb|4DYH|A Chain A, Crystal Structure Of Glycosylated Lipase From Humicola
           Lanuginosa At 2 Angstrom Resolution
 pdb|4DYH|B Chain B, Crystal Structure Of Glycosylated Lipase From Humicola
           Lanuginosa At 2 Angstrom Resolution
 pdb|4EA6|A Chain A, Crystal Structure Of Fungal Lipase From
           Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
           Resolution.
 pdb|4EA6|B Chain B, Crystal Structure Of Fungal Lipase From
           Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
           Resolution.
 pdb|4FLF|A Chain A, Structure Of Three Phase Partition Treated Lipase From
           Thermomyces Lanuginosa At 2.15a Resolution.
 pdb|4FLF|B Chain B, Structure Of Three Phase Partition Treated Lipase From
           Thermomyces Lanuginosa At 2.15a Resolution.
 pdb|4GBG|A Chain A, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
           From Thermomyces Lanuginosa At 2.9 A Resolution
 pdb|4GBG|B Chain B, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
           From Thermomyces Lanuginosa At 2.9 A Resolution
 pdb|4GI1|A Chain A, Structure Of The Complex Of Three Phase Partition Treated
           Lipase From Thermomyces Lanuginosa With
           16-Hydroxypalmitic Acid At 2.4 A Resolution
 pdb|4GI1|B Chain B, Structure Of The Complex Of Three Phase Partition Treated
           Lipase From Thermomyces Lanuginosa With
           16-Hydroxypalmitic Acid At 2.4 A Resolution
 pdb|4GLB|A Chain A, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
           Thermomyces Lanuginosa At 2.69 A Resolution
 pdb|4GLB|B Chain B, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
           Thermomyces Lanuginosa At 2.69 A Resolution
 pdb|4GWL|A Chain A, Structure Of Three Phase Partition Treated Lipase From
           Thermomyces Lanuginosa At 2.55a Resolution
 pdb|4GWL|B Chain B, Structure Of Three Phase Partition Treated Lipase From
           Thermomyces Lanuginosa At 2.55a Resolution
 pdb|4GHW|A Chain A, Crystal Structure Of The Complex Of Fungal Lipase From
           Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
           Resolution
 pdb|4GHW|B Chain B, Crystal Structure Of The Complex Of Fungal Lipase From
           Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
           Resolution
          Length = 269

 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 27/135 (20%)

Query: 164 YVGIDPRKKLVILGIRGTHTV--------YDL--ITDIVSSGSEEVTFEGYSTHFGTAEA 213
           ++ +D   KL++L  RG+ ++        +DL  I DI S         G   H G   +
Sbjct: 66  FLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDICS---------GCRGHDGFTSS 116

Query: 214 ARWFLNHEMGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKKSFKELGFSPDIVTA 273
            R   +     +   +  H  +R+   GHSLGGA+ ++    LR   +         +  
Sbjct: 117 WRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYD--------IDV 168

Query: 274 VAYATPPCVSRELAE 288
            +Y  P   +R  AE
Sbjct: 169 FSYGAPRVGNRAFAE 183


>pdb|1GT6|A Chain A, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
           Complex With Oleic Acid
 pdb|1GT6|B Chain B, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
           Complex With Oleic Acid
          Length = 269

 Score = 40.8 bits (94), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 27/135 (20%)

Query: 164 YVGIDPRKKLVILGIRGTHTV--------YDL--ITDIVSSGSEEVTFEGYSTHFGTAEA 213
           ++ +D   KL++L  RG+ ++        +DL  I DI S         G   H G   +
Sbjct: 66  FLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDICS---------GCRGHDGFTSS 116

Query: 214 ARWFLNHEMGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKKSFKELGFSPDIVTA 273
            R   +     +   +  H  +R+   GH+LGGA+ ++    LR   +         +  
Sbjct: 117 WRSVADTLRQKVEDAVREHPDYRVVFTGHALGGALATVAGADLRGNGYD--------IDV 168

Query: 274 VAYATPPCVSRELAE 288
            +Y  P   +R  AE
Sbjct: 169 FSYGAPRVGNRAFAE 183


>pdb|3TGL|A Chain A, Structure And Molecular Model Refinement Of Rhizomucor
           Miehei Triacylglyceride Lipase: A Case Study Of The Use
           Of Simulated Annealing In Partial Model Refinement
          Length = 269

 Score = 38.5 bits (88), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 7/117 (5%)

Query: 143 MLRESNILKFEKNSSVMRPGYYVGIDPRKKLVILGIRGTHTVYDLITDIVSSGSEEVTFE 202
           +++  + L ++ N+ V R       D  K + I+  RG+ ++ + I D+           
Sbjct: 51  IIKTWSTLIYDTNAMVARG------DSEKTIYIV-FRGSSSIRNWIADLTFVPVSYPPVS 103

Query: 203 GYSTHFGTAEAARWFLNHEMGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKK 259
           G   H G  ++     N  + T+    + +  +++ + GHSLGGA V L A+ L ++
Sbjct: 104 GTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALDLYQR 160


>pdb|5TGL|A Chain A, A Model For Interfacial Activation In Lipases From The
           Structure Of A Fungal Lipase-Inhibitor Complex
          Length = 269

 Score = 37.0 bits (84), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 143 MLRESNILKFEKNSSVMRPGYYVGIDPRKKLVILGIRGTHTVYDLITDIVSSGSEEVTFE 202
           +++  + L ++ N+ V R       D  K + I+  RG+ ++ + I D+           
Sbjct: 51  IIKTWSTLIYDTNAMVARG------DSEKTIYIV-FRGSSSIRNWIADLTFVPVSYPPVS 103

Query: 203 GYSTHFGTAEAARWFLNHEMGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKK 259
           G   H G  ++     N  + T+    + +  +++ + GHSLGGA   L A+ L ++
Sbjct: 104 GTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQR 160


>pdb|1TGL|A Chain A, A Serine Protease Triad Forms The Catalytic Centre Of A
           Triacylglycerol Lipase
          Length = 269

 Score = 37.0 bits (84), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 143 MLRESNILKFEKNSSVMRPGYYVGIDPRKKLVILGIRGTHTVYDLITDIVSSGSEEVTFE 202
           +++  + L ++ N+ V R       D  K + I+  RG+ ++ + I D+           
Sbjct: 51  IIKTWSTLIYDTNAMVARG------DSEKTIYIV-FRGSSSIRNWIADLTFVPVSYPPVS 103

Query: 203 GYSTHFGTAEAARWFLNHEMGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKK 259
           G   H G  ++     N  + T+    + +  +++ + GHSLGGA   L A+ L ++
Sbjct: 104 GTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQR 160


>pdb|4TGL|A Chain A, Catalysis At The Interface: The Anatomy Of A
           Conformational Change In A Triglyceride Lipase
          Length = 269

 Score = 37.0 bits (84), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 143 MLRESNILKFEKNSSVMRPGYYVGIDPRKKLVILGIRGTHTVYDLITDIVSSGSEEVTFE 202
           +++  + L ++ N+ V R       D  K + I+  RG+ ++ + I D+           
Sbjct: 51  IIKTWSTLIYDTNAMVARG------DSEKTIYIV-FRGSSSIRNWIADLTFVPVSYPPVS 103

Query: 203 GYSTHFGTAEAARWFLNHEMGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKK 259
           G   H G  ++     N  + T+    + +  +++ + GHSLGGA   L A+ L ++
Sbjct: 104 GTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQR 160


>pdb|3G7N|A Chain A, Crystal Structure Of A Triacylglycerol Lipase From
           Penicillium Expansum At 1.3
 pdb|3G7N|B Chain B, Crystal Structure Of A Triacylglycerol Lipase From
           Penicillium Expansum At 1.3
          Length = 258

 Score = 35.4 bits (80), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 164 YVGIDPRKKLVILGIRGTHTVYDLITDI-VSSGSEEVTFEGYSTHFGTAEAAR--WFLNH 220
           +VG    KK + + +RG+ T+ D + DI ++  + E++   + +           W   H
Sbjct: 48  FVGYSTEKKTIAVIMRGSTTITDFVNDIDIALITPELSGVTFPSDVKIMRGVHRPWSAVH 107

Query: 221 E--MGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKK 259
           +  +  ++  +  +  + L  VGHSLGGA+ S+  + L + 
Sbjct: 108 DTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVALAQN 148


>pdb|3QLI|A Chain A, Crystal Structure Of Ripa From Yersinia Pestis
 pdb|3QLI|B Chain B, Crystal Structure Of Ripa From Yersinia Pestis
 pdb|3QLK|A Chain A, Crystal Structure Of Ripa From Yersinia Pestis
 pdb|3QLK|B Chain B, Crystal Structure Of Ripa From Yersinia Pestis
          Length = 455

 Score = 31.2 bits (69), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 396 VLEQEGDDGTVPEELFVPGTVYYLKRDVDTNTRSSDSRGREFFTL 440
           VL+   D G +  E+  PG V  ++R V TN R +  RGR  FT 
Sbjct: 252 VLKDRNDLG-IHTEVLNPGLVDLIRRGVVTNQRKTLDRGRSVFTF 295


>pdb|3S8D|A Chain A, Crystal Structure Of Ripa From Yersinia Pestis
 pdb|3S8D|B Chain B, Crystal Structure Of Ripa From Yersinia Pestis
          Length = 455

 Score = 30.8 bits (68), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 396 VLEQEGDDGTVPEELFVPGTVYYLKRDVDTNTRSSDSRGREFFTL 440
           VL+   D G +  E+  PG V  ++R V TN R +  RGR  FT 
Sbjct: 252 VLKDRNDLG-IHTEVLNPGLVDLIRRGVVTNQRKTLDRGRSVFTF 295


>pdb|2ORY|A Chain A, Crystal Structure Of M37 Lipase
 pdb|2ORY|B Chain B, Crystal Structure Of M37 Lipase
          Length = 346

 Score = 30.4 bits (67), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 217 FLNHEMGTIRQCLESHKGFRLRLVGHSLGGAIVSLLAMMLRKKSFKELGFSPDIVTAVAY 276
           FLN ++G   +        ++ + GHS GGA+ S LA+ L+     +L  + DI T + +
Sbjct: 155 FLNEKIGPEGKA-------KICVTGHSKGGALSSTLALWLKDIQGVKLSQNIDIST-IPF 206

Query: 277 ATPPCVSRELAESCSD 292
           A P   + + A+   D
Sbjct: 207 AGPTAGNADFADYFDD 222


>pdb|3FWX|A Chain A, The Crystal Structure Of The Peptide Deformylase From
           Vibrio Cholerae O1 Biovar El Tor Str. N16961
 pdb|3FWX|B Chain B, The Crystal Structure Of The Peptide Deformylase From
           Vibrio Cholerae O1 Biovar El Tor Str. N16961
          Length = 169

 Score = 28.5 bits (62), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 393 NATVLEQEGDDGTVPEELFVPGTVYYLKRDVDTNTRSSDSRGREF 437
           N  ++E+ G+DG     L VPG    + R  +   ++ D  G+E+
Sbjct: 75  NPEIIEKRGEDGIEEGCLSVPGARALVPRAAEVTVKALDRNGQEY 119


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.318    0.134    0.387 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,652,729
Number of Sequences: 62578
Number of extensions: 468948
Number of successful extensions: 1050
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1029
Number of HSP's gapped (non-prelim): 19
length of query: 488
length of database: 14,973,337
effective HSP length: 103
effective length of query: 385
effective length of database: 8,527,803
effective search space: 3283204155
effective search space used: 3283204155
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)