Query 011349
Match_columns 488
No_of_seqs 607 out of 4513
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 00:21:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011349.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011349hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.1E-54 2.3E-59 422.7 27.0 274 37-313 61-355 (361)
2 KOG0581 Mitogen-activated prot 100.0 3.5E-54 7.6E-59 395.9 16.0 246 55-306 80-335 (364)
3 KOG0192 Tyrosine kinase specif 100.0 3.6E-52 7.7E-57 401.9 20.5 253 58-314 45-307 (362)
4 KOG0595 Serine/threonine-prote 100.0 1.3E-50 2.7E-55 375.5 16.7 248 53-306 9-268 (429)
5 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-50 3E-55 389.2 17.1 252 57-314 209-465 (468)
6 KOG0615 Serine/threonine prote 100.0 4.4E-51 9.5E-56 378.0 12.9 249 54-307 172-438 (475)
7 KOG0591 NIMA (never in mitosis 100.0 1.7E-51 3.6E-56 362.8 7.7 248 55-307 20-282 (375)
8 KOG0575 Polo-like serine/threo 100.0 9.5E-50 2.1E-54 387.2 16.9 245 54-307 18-270 (592)
9 KOG0598 Ribosomal protein S6 k 100.0 2.1E-49 4.5E-54 364.4 13.2 245 54-306 25-281 (357)
10 KOG0593 Predicted protein kina 100.0 4.5E-49 9.7E-54 350.8 14.4 248 55-306 3-284 (396)
11 KOG0198 MEKK and related serin 100.0 1.9E-48 4.1E-53 364.6 14.8 251 56-311 19-281 (313)
12 KOG0661 MAPK related serine/th 100.0 1.1E-48 2.5E-53 368.0 10.9 249 54-307 10-292 (538)
13 KOG0659 Cdk activating kinase 100.0 3.5E-47 7.5E-52 333.2 18.2 248 55-306 3-281 (318)
14 KOG0600 Cdc2-related protein k 100.0 6.4E-47 1.4E-51 358.8 15.3 249 55-306 118-400 (560)
15 KOG4721 Serine/threonine prote 100.0 2.3E-46 5E-51 358.2 18.9 235 59-308 129-366 (904)
16 KOG0582 Ste20-like serine/thre 100.0 1.5E-46 3.3E-51 351.1 17.1 254 52-306 24-293 (516)
17 KOG0578 p21-activated serine/t 100.0 1.4E-46 3E-51 362.3 15.3 246 54-306 273-523 (550)
18 KOG0592 3-phosphoinositide-dep 100.0 1.5E-46 3.2E-51 359.2 13.1 245 54-307 73-339 (604)
19 KOG0597 Serine-threonine prote 100.0 1.7E-46 3.7E-51 359.1 13.4 242 55-306 3-251 (808)
20 KOG0663 Protein kinase PITSLRE 100.0 7.3E-46 1.6E-50 334.6 15.3 257 48-307 70-362 (419)
21 KOG0201 Serine/threonine prote 100.0 1.3E-46 2.9E-51 351.4 9.9 243 56-306 15-263 (467)
22 KOG0616 cAMP-dependent protein 100.0 2.3E-46 5E-51 332.8 10.7 234 55-297 45-283 (355)
23 KOG0583 Serine/threonine prote 100.0 2E-45 4.4E-50 358.5 18.3 245 53-306 16-275 (370)
24 KOG0196 Tyrosine kinase, EPH ( 100.0 2.4E-46 5.3E-51 370.1 9.6 324 40-370 609-956 (996)
25 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.6E-45 1.2E-49 358.0 17.1 254 55-313 8-337 (338)
26 KOG0588 Serine/threonine prote 100.0 4.4E-45 9.5E-50 356.1 15.6 245 52-307 10-264 (786)
27 PHA02988 hypothetical protein; 100.0 1.8E-44 3.9E-49 344.9 19.7 261 35-311 9-280 (283)
28 KOG1026 Nerve growth factor re 100.0 8.6E-46 1.9E-50 373.1 11.0 253 57-315 489-767 (774)
29 KOG0193 Serine/threonine prote 100.0 3.9E-45 8.5E-50 353.5 15.0 249 56-313 394-656 (678)
30 KOG0605 NDR and related serine 100.0 9E-45 2E-49 347.2 14.2 249 52-306 139-445 (550)
31 PRK13184 pknD serine/threonine 100.0 1.1E-43 2.3E-48 373.2 23.3 255 54-312 2-292 (932)
32 KOG0585 Ca2+/calmodulin-depend 100.0 1.6E-44 3.5E-49 339.7 15.1 252 53-312 96-378 (576)
33 KOG0589 Serine/threonine prote 100.0 1.2E-44 2.6E-49 347.3 14.3 247 54-306 4-258 (426)
34 PTZ00263 protein kinase A cata 100.0 5.2E-44 1.1E-48 349.3 19.0 246 53-307 17-272 (329)
35 KOG0194 Protein tyrosine kinas 100.0 1.5E-44 3.3E-49 353.1 14.5 255 57-317 160-427 (474)
36 cd05571 STKc_PKB Catalytic dom 100.0 2.8E-44 6.1E-49 350.4 16.4 237 61-306 2-251 (323)
37 KOG0611 Predicted serine/threo 100.0 1.4E-44 3.1E-49 333.3 13.4 243 55-308 54-305 (668)
38 KOG0658 Glycogen synthase kina 100.0 3.9E-45 8.5E-50 335.4 9.6 242 59-306 29-306 (364)
39 cd05631 STKc_GRK4 Catalytic do 100.0 3E-44 6.6E-49 344.1 15.9 247 57-306 3-261 (285)
40 KOG0660 Mitogen-activated prot 100.0 1E-44 2.2E-49 332.2 11.8 245 57-306 25-310 (359)
41 KOG0694 Serine/threonine prote 100.0 3.6E-44 7.9E-49 352.3 16.0 242 55-306 369-624 (694)
42 cd05612 STKc_PRKX_like Catalyt 100.0 2.5E-44 5.4E-49 345.7 14.5 244 55-307 2-255 (291)
43 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.9E-43 4.2E-48 346.2 18.4 250 55-307 2-258 (333)
44 KOG0580 Serine/threonine prote 100.0 3.5E-44 7.7E-49 309.9 11.2 244 57-307 25-274 (281)
45 cd05593 STKc_PKB_gamma Catalyt 100.0 2.2E-43 4.7E-48 344.7 18.2 238 61-307 2-252 (328)
46 cd06649 PKc_MEK2 Catalytic dom 100.0 2.1E-43 4.5E-48 345.5 18.0 252 54-307 5-302 (331)
47 PTZ00426 cAMP-dependent protei 100.0 1.3E-43 2.8E-48 347.3 16.2 245 53-306 29-284 (340)
48 cd05585 STKc_YPK1_like Catalyt 100.0 2.5E-43 5.4E-48 342.2 17.8 236 62-306 1-247 (312)
49 cd05104 PTKc_Kit Catalytic dom 100.0 1.9E-43 4.1E-48 351.1 16.9 249 56-309 37-373 (375)
50 cd05595 STKc_PKB_beta Catalyti 100.0 1.9E-43 4.2E-48 344.4 16.1 237 61-306 2-251 (323)
51 cd05106 PTKc_CSF-1R Catalytic 100.0 1.7E-43 3.8E-48 351.1 15.9 252 55-311 39-373 (374)
52 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.2E-43 7E-48 333.6 17.0 249 55-310 6-265 (266)
53 cd05072 PTKc_Lyn Catalytic dom 100.0 6E-43 1.3E-47 330.8 18.4 250 54-310 6-261 (261)
54 KOG1095 Protein tyrosine kinas 100.0 2E-43 4.4E-48 368.5 16.1 253 57-315 695-966 (1025)
55 KOG2345 Serine/threonine prote 100.0 3.7E-43 8E-48 305.0 14.8 257 52-311 19-301 (302)
56 cd05052 PTKc_Abl Catalytic dom 100.0 8.1E-43 1.8E-47 330.3 18.3 249 55-310 7-262 (263)
57 cd05096 PTKc_DDR1 Catalytic do 100.0 8E-43 1.7E-47 337.5 18.5 252 55-308 6-303 (304)
58 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.4E-43 7.4E-48 347.1 15.5 247 55-307 2-286 (350)
59 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.5E-42 3.2E-47 327.2 19.1 246 54-307 4-255 (256)
60 cd05048 PTKc_Ror Catalytic Dom 100.0 8.5E-43 1.8E-47 333.8 17.5 250 55-310 6-283 (283)
61 cd05626 STKc_LATS2 Catalytic d 100.0 9.9E-43 2.2E-47 347.2 18.3 247 55-306 2-305 (381)
62 cd07848 STKc_CDKL5 Catalytic d 100.0 1.3E-42 2.9E-47 333.1 18.5 249 55-306 2-284 (287)
63 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-42 2.9E-47 338.6 18.4 238 60-306 2-256 (323)
64 cd05594 STKc_PKB_alpha Catalyt 100.0 5.2E-43 1.1E-47 341.9 15.2 238 61-307 2-253 (325)
65 PLN00034 mitogen-activated pro 100.0 5.8E-43 1.3E-47 345.5 15.6 247 52-307 72-329 (353)
66 PF07714 Pkinase_Tyr: Protein 100.0 6.9E-44 1.5E-48 336.7 8.5 244 58-307 3-259 (259)
67 cd05148 PTKc_Srm_Brk Catalytic 100.0 9.8E-43 2.1E-47 329.3 16.4 249 56-310 8-261 (261)
68 cd05108 PTKc_EGFR Catalytic do 100.0 1.7E-42 3.6E-47 337.1 18.4 252 55-314 8-272 (316)
69 KOG0594 Protein kinase PCTAIRE 100.0 1.7E-42 3.6E-47 318.8 17.1 249 56-306 13-302 (323)
70 KOG0577 Serine/threonine prote 100.0 2.6E-43 5.6E-48 338.6 12.1 241 59-306 31-278 (948)
71 cd05599 STKc_NDR_like Catalyti 100.0 8.2E-43 1.8E-47 346.1 16.0 246 55-306 2-296 (364)
72 cd06650 PKc_MEK1 Catalytic dom 100.0 1.4E-42 3.1E-47 339.6 17.2 250 55-306 6-299 (333)
73 cd05068 PTKc_Frk_like Catalyti 100.0 3.2E-42 6.9E-47 325.8 18.5 248 55-309 7-260 (261)
74 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.7E-42 3.7E-47 332.5 16.7 251 53-306 4-285 (288)
75 cd05589 STKc_PKN Catalytic dom 100.0 1.7E-42 3.8E-47 338.1 16.9 242 56-307 1-258 (324)
76 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.1E-42 4.6E-47 344.7 17.5 253 55-312 38-399 (400)
77 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.9E-42 4.2E-47 334.7 16.7 250 54-306 5-288 (303)
78 cd05596 STKc_ROCK Catalytic do 100.0 1.6E-42 3.4E-47 343.9 16.3 248 52-307 41-305 (370)
79 cd05590 STKc_nPKC_eta Catalyti 100.0 1.8E-42 3.9E-47 337.1 16.3 237 61-306 2-253 (320)
80 cd05090 PTKc_Ror1 Catalytic do 100.0 3E-42 6.5E-47 330.0 17.5 251 53-309 4-282 (283)
81 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.3E-42 7.1E-47 324.8 17.5 246 55-308 5-256 (256)
82 cd05598 STKc_LATS Catalytic do 100.0 1.6E-42 3.4E-47 345.5 16.1 247 54-306 1-301 (376)
83 cd05591 STKc_nPKC_epsilon Cata 100.0 2.7E-42 5.9E-47 336.2 17.4 237 61-306 2-254 (321)
84 cd05614 STKc_MSK2_N N-terminal 100.0 1.9E-42 4.2E-47 339.1 16.4 247 56-307 2-268 (332)
85 cd05628 STKc_NDR1 Catalytic do 100.0 1.7E-42 3.8E-47 343.3 16.1 247 55-306 2-293 (363)
86 cd05625 STKc_LATS1 Catalytic d 100.0 1.9E-42 4.1E-47 345.5 16.5 246 55-306 2-305 (382)
87 cd05608 STKc_GRK1 Catalytic do 100.0 2.1E-42 4.5E-47 330.5 16.1 242 62-306 1-257 (280)
88 cd05592 STKc_nPKC_theta_delta 100.0 2.9E-42 6.2E-47 335.1 17.2 237 61-306 2-248 (316)
89 cd05588 STKc_aPKC Catalytic do 100.0 2.4E-42 5.2E-47 337.6 16.8 241 61-306 2-262 (329)
90 cd05605 STKc_GRK4_like Catalyt 100.0 2.2E-42 4.7E-47 331.3 16.1 248 56-306 2-261 (285)
91 cd05582 STKc_RSK_N N-terminal 100.0 1.2E-42 2.7E-47 338.3 14.5 238 60-306 2-254 (318)
92 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.3E-42 1.1E-46 324.2 18.4 247 55-309 7-259 (260)
93 PTZ00267 NIMA-related protein 100.0 1.6E-42 3.5E-47 354.6 16.0 247 54-306 67-323 (478)
94 cd05054 PTKc_VEGFR Catalytic d 100.0 3.1E-42 6.7E-47 337.6 17.3 253 55-312 8-335 (337)
95 cd05618 STKc_aPKC_iota Catalyt 100.0 2.7E-42 5.9E-47 337.1 16.9 241 61-306 2-262 (329)
96 cd05629 STKc_NDR_like_fungal C 100.0 1.8E-42 3.9E-47 345.1 15.8 245 55-307 2-306 (377)
97 cd05049 PTKc_Trk Catalytic dom 100.0 4.4E-42 9.6E-47 328.3 17.5 248 55-308 6-279 (280)
98 cd05587 STKc_cPKC Catalytic do 100.0 2.9E-42 6.3E-47 336.5 16.2 242 56-306 2-257 (324)
99 KOG0667 Dual-specificity tyros 100.0 4E-42 8.7E-47 337.8 17.0 195 55-252 187-391 (586)
100 KOG0610 Putative serine/threon 100.0 3E-42 6.4E-47 319.9 15.0 250 52-306 75-392 (459)
101 cd05091 PTKc_Ror2 Catalytic do 100.0 4.2E-42 9.1E-47 329.0 16.5 251 53-309 4-282 (283)
102 cd07862 STKc_CDK6 Catalytic do 100.0 6.7E-42 1.5E-46 328.8 17.9 250 55-306 2-287 (290)
103 cd05621 STKc_ROCK2 Catalytic d 100.0 4.6E-42 1E-46 340.2 17.2 246 53-306 42-304 (370)
104 cd05620 STKc_nPKC_delta Cataly 100.0 4.1E-42 8.9E-47 334.0 16.3 237 61-306 2-248 (316)
105 cd06646 STKc_MAP4K5 Catalytic 100.0 9.2E-42 2E-46 323.8 18.1 251 53-307 8-266 (267)
106 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.3E-42 7.2E-47 338.4 15.5 247 56-306 2-290 (338)
107 KOG0033 Ca2+/calmodulin-depend 100.0 5.9E-44 1.3E-48 309.1 2.7 247 56-307 13-268 (355)
108 cd05616 STKc_cPKC_beta Catalyt 100.0 4.5E-42 9.8E-47 335.0 16.1 242 56-306 2-257 (323)
109 cd05059 PTKc_Tec_like Catalyti 100.0 9E-42 2E-46 321.8 17.6 245 55-307 5-255 (256)
110 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.3E-41 2.9E-46 321.4 18.7 247 55-309 7-259 (260)
111 cd05607 STKc_GRK7 Catalytic do 100.0 6.2E-42 1.4E-46 326.7 16.6 243 62-306 1-250 (277)
112 cd05094 PTKc_TrkC Catalytic do 100.0 8.5E-42 1.8E-46 328.3 17.5 253 55-313 6-285 (291)
113 PHA03212 serine/threonine kina 100.0 6.9E-42 1.5E-46 340.8 17.3 243 54-306 92-376 (391)
114 cd05033 PTKc_EphR Catalytic do 100.0 1.7E-41 3.6E-46 321.9 19.0 248 56-310 6-265 (266)
115 cd05570 STKc_PKC Catalytic dom 100.0 6.1E-42 1.3E-46 333.2 16.2 237 61-306 2-252 (318)
116 cd05619 STKc_nPKC_theta Cataly 100.0 6.1E-42 1.3E-46 332.7 16.2 237 61-306 2-248 (316)
117 cd05575 STKc_SGK Catalytic dom 100.0 6.8E-42 1.5E-46 333.8 16.5 237 61-306 2-251 (323)
118 cd05071 PTKc_Src Catalytic dom 100.0 1.8E-41 3.8E-46 320.9 18.9 248 55-310 7-260 (262)
119 cd05093 PTKc_TrkB Catalytic do 100.0 8.8E-42 1.9E-46 327.6 17.0 252 56-313 7-282 (288)
120 cd05082 PTKc_Csk Catalytic dom 100.0 1.3E-41 2.9E-46 320.6 17.9 248 54-310 6-256 (256)
121 cd05116 PTKc_Syk Catalytic dom 100.0 1.7E-41 3.6E-46 320.2 18.3 240 61-309 2-254 (257)
122 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.1E-41 4.6E-46 324.2 19.3 251 57-311 7-282 (283)
123 cd05601 STKc_CRIK Catalytic do 100.0 4.4E-42 9.5E-47 336.3 14.6 247 55-306 2-263 (330)
124 KOG0574 STE20-like serine/thre 100.0 3E-43 6.6E-48 313.1 5.8 241 57-306 36-283 (502)
125 cd05084 PTKc_Fes Catalytic dom 100.0 1.7E-41 3.6E-46 319.2 17.9 241 61-308 2-251 (252)
126 cd08228 STKc_Nek6 Catalytic do 100.0 2.3E-41 5E-46 321.0 18.8 253 55-311 3-266 (267)
127 cd05092 PTKc_TrkA Catalytic do 100.0 1.1E-41 2.3E-46 325.7 16.6 250 53-308 4-279 (280)
128 cd06654 STKc_PAK1 Catalytic do 100.0 1.4E-41 3E-46 327.5 17.4 252 48-306 14-270 (296)
129 cd05088 PTKc_Tie2 Catalytic do 100.0 2E-41 4.4E-46 327.4 18.5 256 53-314 6-284 (303)
130 cd08229 STKc_Nek7 Catalytic do 100.0 3E-41 6.5E-46 320.2 19.2 255 54-311 2-266 (267)
131 KOG1989 ARK protein kinase fam 100.0 1E-41 2.2E-46 345.3 16.6 251 55-313 38-314 (738)
132 cd08529 STKc_FA2-like Catalyti 100.0 2.9E-41 6.2E-46 318.2 18.5 245 56-306 2-253 (256)
133 cd05111 PTK_HER3 Pseudokinase 100.0 3.1E-41 6.7E-46 322.3 18.8 251 55-313 8-271 (279)
134 PTZ00283 serine/threonine prot 100.0 9.7E-42 2.1E-46 349.0 16.4 247 54-306 32-297 (496)
135 cd05627 STKc_NDR2 Catalytic do 100.0 7.6E-42 1.7E-46 338.4 15.0 244 55-306 2-293 (360)
136 cd05089 PTKc_Tie1 Catalytic do 100.0 2.9E-41 6.2E-46 325.5 18.5 256 53-314 1-279 (297)
137 cd05053 PTKc_FGFR Catalytic do 100.0 3.3E-41 7.1E-46 324.5 18.8 250 56-311 14-292 (293)
138 PTZ00036 glycogen synthase kin 100.0 7.8E-42 1.7E-46 345.7 15.1 246 55-306 67-351 (440)
139 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.3E-41 7.2E-46 323.0 18.6 254 55-310 5-283 (284)
140 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.7E-41 1E-45 317.9 19.1 239 61-308 2-262 (262)
141 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.3E-41 2.8E-46 332.2 15.5 241 61-306 2-260 (327)
142 cd05039 PTKc_Csk_like Catalyti 100.0 3.4E-41 7.3E-46 317.9 17.7 248 55-310 7-256 (256)
143 cd05062 PTKc_IGF-1R Catalytic 100.0 2.2E-41 4.7E-46 323.0 16.6 247 56-308 8-276 (277)
144 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.2E-41 2.6E-46 321.4 14.6 240 61-308 2-258 (258)
145 cd05632 STKc_GRK5 Catalytic do 100.0 3.5E-41 7.6E-46 322.9 18.0 247 57-306 3-261 (285)
146 KOG0579 Ste20-like serine/thre 100.0 1.4E-42 3E-47 335.8 8.2 247 54-306 32-289 (1187)
147 cd05603 STKc_SGK2 Catalytic do 100.0 1.9E-41 4.1E-46 330.4 16.4 232 61-301 2-242 (321)
148 cd05622 STKc_ROCK1 Catalytic d 100.0 2.1E-41 4.6E-46 335.7 17.0 250 50-307 39-305 (371)
149 cd05602 STKc_SGK1 Catalytic do 100.0 1.9E-41 4.1E-46 330.9 16.3 234 61-303 2-244 (325)
150 cd05604 STKc_SGK3 Catalytic do 100.0 1.3E-41 2.9E-46 331.9 15.0 232 61-301 2-242 (325)
151 KOG0032 Ca2+/calmodulin-depend 100.0 3.4E-41 7.4E-46 328.4 17.7 246 55-306 36-293 (382)
152 cd05034 PTKc_Src_like Catalyti 100.0 5E-41 1.1E-45 317.6 18.4 248 55-309 7-260 (261)
153 cd05115 PTKc_Zap-70 Catalytic 100.0 5.2E-41 1.1E-45 316.8 18.3 242 61-310 2-255 (257)
154 cd05069 PTKc_Yes Catalytic dom 100.0 5.8E-41 1.3E-45 317.0 18.5 247 55-309 7-259 (260)
155 cd05615 STKc_cPKC_alpha Cataly 100.0 2.6E-41 5.7E-46 329.4 16.4 241 57-306 3-257 (323)
156 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.8E-41 6E-46 336.5 16.9 250 56-310 39-399 (401)
157 cd05055 PTKc_PDGFR Catalytic d 100.0 3.8E-41 8.3E-46 325.3 17.4 250 56-310 37-301 (302)
158 cd06625 STKc_MEKK3_like Cataly 100.0 4.7E-41 1E-45 318.1 17.6 244 57-307 5-261 (263)
159 cd05098 PTKc_FGFR1 Catalytic d 100.0 3E-41 6.5E-46 327.0 16.7 254 55-314 19-303 (307)
160 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.2E-41 6.8E-46 321.2 16.4 239 61-308 2-274 (274)
161 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.5E-41 1.6E-45 320.5 19.1 253 56-310 6-283 (284)
162 KOG1094 Discoidin domain recep 100.0 1E-41 2.2E-46 327.4 13.0 252 57-310 541-804 (807)
163 cd06656 STKc_PAK3 Catalytic do 100.0 3.5E-41 7.7E-46 324.8 17.0 254 46-306 11-269 (297)
164 KOG4279 Serine/threonine prote 100.0 1.3E-41 2.8E-46 332.2 13.8 241 61-306 582-832 (1226)
165 cd05085 PTKc_Fer Catalytic dom 100.0 8.1E-41 1.7E-45 314.1 18.7 241 61-308 2-249 (250)
166 cd06644 STKc_STK10_LOK Catalyt 100.0 5.6E-41 1.2E-45 322.7 17.9 257 45-306 3-269 (292)
167 cd05035 PTKc_Axl_like Catalyti 100.0 1.2E-40 2.6E-45 317.1 19.9 248 57-310 2-272 (273)
168 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.3E-40 2.8E-45 315.7 19.8 253 55-311 3-266 (267)
169 cd05109 PTKc_HER2 Catalytic do 100.0 7.4E-41 1.6E-45 319.7 18.2 251 56-314 9-272 (279)
170 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.9E-41 6.2E-46 326.7 15.5 252 56-313 17-299 (304)
171 cd05630 STKc_GRK6 Catalytic do 100.0 3.4E-41 7.3E-46 323.0 15.7 247 57-306 3-261 (285)
172 cd05045 PTKc_RET Catalytic dom 100.0 6.4E-41 1.4E-45 322.0 17.7 252 56-313 2-289 (290)
173 cd06643 STKc_SLK Catalytic dom 100.0 7.5E-41 1.6E-45 320.2 18.1 247 56-307 7-263 (282)
174 cd00192 PTKc Catalytic domain 100.0 1.2E-40 2.6E-45 314.7 19.3 243 60-308 1-262 (262)
175 cd05065 PTKc_EphR_B Catalytic 100.0 6.7E-41 1.5E-45 318.2 17.5 250 54-310 4-268 (269)
176 cd06637 STKc_TNIK Catalytic do 100.0 7E-41 1.5E-45 318.6 17.5 244 57-306 9-269 (272)
177 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.1E-41 1.3E-45 319.9 17.1 247 56-308 8-276 (277)
178 cd07853 STKc_NLK Catalytic dom 100.0 3.6E-41 7.8E-46 335.1 16.0 248 56-307 2-289 (372)
179 cd05075 PTKc_Axl Catalytic dom 100.0 9.1E-41 2E-45 317.8 18.1 248 57-310 2-271 (272)
180 cd06645 STKc_MAP4K3 Catalytic 100.0 6.4E-41 1.4E-45 318.0 16.9 247 55-306 10-265 (267)
181 cd07863 STKc_CDK4 Catalytic do 100.0 7.1E-41 1.5E-45 321.3 17.4 249 56-306 2-285 (288)
182 cd08219 STKc_Nek3 Catalytic do 100.0 7E-41 1.5E-45 315.5 17.0 245 56-306 2-252 (255)
183 cd05040 PTKc_Ack_like Catalyti 100.0 1E-40 2.2E-45 314.7 18.0 242 61-308 2-256 (257)
184 KOG4257 Focal adhesion tyrosin 100.0 4.5E-41 9.8E-46 325.0 15.6 246 59-312 394-651 (974)
185 cd05597 STKc_DMPK_like Catalyt 100.0 8.8E-41 1.9E-45 326.8 17.9 249 55-306 2-266 (331)
186 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.3E-40 5E-45 314.6 20.1 247 60-308 1-268 (269)
187 cd06619 PKc_MKK5 Catalytic dom 100.0 7.7E-41 1.7E-45 319.6 16.8 244 56-306 3-253 (279)
188 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.1E-41 1.8E-45 328.7 17.4 253 55-312 8-341 (343)
189 cd05073 PTKc_Hck Catalytic dom 100.0 1.9E-40 4.2E-45 313.5 19.2 247 55-309 7-259 (260)
190 cd06655 STKc_PAK2 Catalytic do 100.0 1.2E-40 2.6E-45 320.9 17.9 252 48-306 13-269 (296)
191 cd05058 PTKc_Met_Ron Catalytic 100.0 1.3E-40 2.8E-45 315.0 17.8 246 61-312 2-261 (262)
192 cd05032 PTKc_InsR_like Catalyt 100.0 9.7E-41 2.1E-45 318.5 17.1 248 55-308 7-276 (277)
193 KOG4278 Protein tyrosine kinas 100.0 2E-41 4.4E-46 327.1 12.2 249 58-313 271-526 (1157)
194 cd05051 PTKc_DDR Catalytic dom 100.0 1.7E-40 3.7E-45 320.0 18.8 253 55-308 6-295 (296)
195 cd07876 STKc_JNK2 Catalytic do 100.0 1.1E-40 2.3E-45 330.2 17.8 248 54-307 21-316 (359)
196 cd05083 PTKc_Chk Catalytic dom 100.0 1.1E-40 2.4E-45 314.0 17.0 246 54-309 6-253 (254)
197 cd08227 PK_STRAD_alpha Pseudok 100.0 9.9E-41 2.1E-45 326.2 17.0 248 58-306 2-307 (327)
198 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-40 2.3E-45 318.3 16.8 242 56-306 6-253 (277)
199 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.1E-40 2.5E-45 319.1 17.0 254 55-310 5-283 (284)
200 cd05041 PTKc_Fes_like Catalyti 100.0 1.7E-40 3.7E-45 312.0 17.9 242 60-308 1-250 (251)
201 cd05112 PTKc_Itk Catalytic dom 100.0 1.8E-40 3.8E-45 312.9 18.0 246 54-307 4-255 (256)
202 cd06624 STKc_ASK Catalytic dom 100.0 1.1E-40 2.4E-45 316.5 16.6 253 46-306 3-265 (268)
203 cd06615 PKc_MEK Catalytic doma 100.0 1.5E-40 3.3E-45 322.1 17.8 251 55-308 2-289 (308)
204 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.2E-40 4.7E-45 321.9 18.8 252 56-313 14-296 (314)
205 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-40 2.8E-45 316.1 16.8 247 57-310 8-267 (268)
206 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.5E-41 1.8E-45 324.1 15.8 250 54-306 6-286 (309)
207 cd05060 PTKc_Syk_like Catalyti 100.0 1.8E-40 3.9E-45 313.1 17.6 243 60-311 1-256 (257)
208 KOG0199 ACK and related non-re 100.0 5.5E-41 1.2E-45 328.2 14.0 243 58-307 114-369 (1039)
209 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.3E-40 7.1E-45 323.5 19.6 254 56-315 14-298 (334)
210 cd05097 PTKc_DDR_like Catalyti 100.0 2.1E-40 4.5E-45 319.3 17.8 253 55-308 6-294 (295)
211 cd05042 PTKc_Aatyk Catalytic d 100.0 2.7E-40 5.9E-45 314.1 18.3 247 60-308 1-268 (269)
212 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.4E-40 5.2E-45 314.0 17.8 242 57-306 3-264 (267)
213 cd05066 PTKc_EphR_A Catalytic 100.0 2.4E-40 5.1E-45 314.2 17.7 249 55-310 5-266 (267)
214 cd06613 STKc_MAP4K3_like Catal 100.0 3.9E-40 8.6E-45 311.5 19.2 249 55-306 4-260 (262)
215 cd07874 STKc_JNK3 Catalytic do 100.0 9.5E-41 2.1E-45 330.1 15.5 247 54-306 17-311 (355)
216 cd05624 STKc_MRCK_beta Catalyt 100.0 1.7E-40 3.8E-45 324.8 17.2 249 55-306 2-266 (331)
217 cd08221 STKc_Nek9 Catalytic do 100.0 3E-40 6.4E-45 311.4 18.1 246 56-307 2-254 (256)
218 cd05061 PTKc_InsR Catalytic do 100.0 2E-40 4.3E-45 318.3 17.0 251 55-311 7-279 (288)
219 cd06609 STKc_MST3_like Catalyt 100.0 2.3E-40 5.1E-45 315.4 17.2 243 55-306 2-251 (274)
220 cd05586 STKc_Sck1_like Catalyt 100.0 7E-41 1.5E-45 327.7 13.8 236 62-306 1-253 (330)
221 KOG0599 Phosphorylase kinase g 100.0 2E-41 4.3E-46 297.8 8.8 253 48-309 11-286 (411)
222 cd05047 PTKc_Tie Catalytic dom 100.0 3.4E-40 7.3E-45 313.6 18.0 245 61-311 2-269 (270)
223 cd06611 STKc_SLK_like Catalyti 100.0 1.6E-40 3.4E-45 317.6 15.8 248 53-306 4-262 (280)
224 cd08223 STKc_Nek4 Catalytic do 100.0 3.2E-40 7E-45 311.3 17.6 245 56-306 2-254 (257)
225 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.3E-40 7.1E-45 311.5 17.7 237 61-308 2-259 (259)
226 cd05043 PTK_Ryk Pseudokinase d 100.0 3E-40 6.5E-45 315.7 17.5 252 56-313 8-279 (280)
227 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.4E-40 5.2E-45 317.1 16.9 255 54-312 5-272 (284)
228 cd07875 STKc_JNK1 Catalytic do 100.0 6.6E-40 1.4E-44 325.2 20.4 247 54-306 24-318 (364)
229 KOG0596 Dual specificity; seri 100.0 4.6E-41 1E-45 321.6 11.6 246 54-306 361-627 (677)
230 cd06640 STKc_MST4 Catalytic do 100.0 3.4E-40 7.4E-45 314.8 17.7 243 56-307 6-254 (277)
231 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3E-40 6.5E-45 325.1 17.5 249 53-306 14-298 (343)
232 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.1E-40 6.7E-45 315.9 16.9 256 42-306 7-279 (282)
233 cd06631 STKc_YSK4 Catalytic do 100.0 3.4E-40 7.3E-45 312.7 17.0 244 56-306 2-262 (265)
234 cd05623 STKc_MRCK_alpha Cataly 100.0 3.5E-40 7.6E-45 322.8 17.6 249 55-306 2-266 (332)
235 PHA03211 serine/threonine kina 100.0 2.1E-40 4.5E-45 334.1 16.3 242 56-306 171-455 (461)
236 cd05050 PTKc_Musk Catalytic do 100.0 3.2E-40 7E-45 316.8 16.8 249 55-309 6-288 (288)
237 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.6E-40 9.9E-45 315.4 17.6 249 55-306 2-262 (286)
238 cd05095 PTKc_DDR2 Catalytic do 100.0 7.3E-40 1.6E-44 315.6 19.1 252 56-308 7-295 (296)
239 cd06638 STKc_myosinIIIA Cataly 100.0 6E-40 1.3E-44 314.6 18.0 259 41-307 8-284 (286)
240 cd07868 STKc_CDK8 Catalytic do 100.0 7.9E-40 1.7E-44 318.5 18.8 244 59-306 6-314 (317)
241 cd05056 PTKc_FAK Catalytic dom 100.0 5.9E-40 1.3E-44 311.9 17.5 250 56-313 8-268 (270)
242 cd06612 STKc_MST1_2 Catalytic 100.0 6.8E-40 1.5E-44 308.8 17.7 245 55-306 4-253 (256)
243 PHA03209 serine/threonine kina 100.0 1.3E-39 2.8E-44 321.7 20.4 243 55-306 67-351 (357)
244 cd05057 PTKc_EGFR_like Catalyt 100.0 9.5E-40 2.1E-44 312.1 18.8 251 55-313 8-271 (279)
245 KOG4717 Serine/threonine prote 100.0 1.4E-39 3.1E-44 308.4 19.3 243 56-306 20-270 (864)
246 cd05574 STKc_phototropin_like 100.0 5.3E-40 1.2E-44 319.6 16.9 247 55-306 2-289 (316)
247 cd05046 PTK_CCK4 Pseudokinase 100.0 7.3E-40 1.6E-44 312.1 17.4 249 55-308 6-274 (275)
248 cd07861 STKc_CDK1_euk Catalyti 100.0 5.1E-40 1.1E-44 314.9 16.3 249 56-306 2-282 (285)
249 cd06629 STKc_MAPKKK_Bck1_like 100.0 8.4E-40 1.8E-44 311.2 17.7 248 56-306 3-269 (272)
250 PHA03207 serine/threonine kina 100.0 6.5E-40 1.4E-44 327.9 17.7 244 55-307 93-376 (392)
251 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.3E-39 2.8E-44 309.2 18.9 246 61-308 2-267 (268)
252 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.1E-39 2.4E-44 309.3 18.4 250 55-306 2-264 (267)
253 cd08218 STKc_Nek1 Catalytic do 100.0 8E-40 1.7E-44 308.4 17.2 245 56-306 2-253 (256)
254 PTZ00266 NIMA-related protein 100.0 1.1E-39 2.3E-44 344.4 19.8 249 53-306 12-295 (1021)
255 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8.1E-40 1.8E-44 316.1 17.5 252 52-306 4-286 (301)
256 cd05110 PTKc_HER4 Catalytic do 100.0 8.1E-40 1.8E-44 316.3 17.2 249 57-313 10-271 (303)
257 cd05044 PTKc_c-ros Catalytic d 100.0 6.5E-40 1.4E-44 311.4 16.2 242 61-308 2-268 (269)
258 cd07847 STKc_CDKL1_4 Catalytic 100.0 8.6E-40 1.9E-44 313.4 17.0 249 55-306 2-283 (286)
259 cd06651 STKc_MEKK3 Catalytic d 100.0 8.9E-40 1.9E-44 310.0 16.9 242 57-306 5-261 (266)
260 cd06658 STKc_PAK5 Catalytic do 100.0 5.2E-40 1.1E-44 315.8 15.2 240 60-306 28-272 (292)
261 PF00069 Pkinase: Protein kina 100.0 5.1E-41 1.1E-45 317.2 8.0 246 56-306 1-257 (260)
262 cd08220 STKc_Nek8 Catalytic do 100.0 1.2E-39 2.6E-44 307.1 17.3 245 56-306 2-253 (256)
263 smart00219 TyrKc Tyrosine kina 100.0 1.3E-39 2.9E-44 307.0 17.5 245 57-307 2-258 (258)
264 cd05580 STKc_PKA Catalytic dom 100.0 1.1E-39 2.4E-44 313.4 17.0 243 55-306 2-254 (290)
265 cd06647 STKc_PAK_I Catalytic d 100.0 1.1E-39 2.5E-44 313.6 17.0 247 52-306 17-269 (293)
266 cd06607 STKc_TAO Catalytic dom 100.0 1.9E-39 4.2E-44 314.3 18.7 246 55-307 16-268 (307)
267 cd06659 STKc_PAK6 Catalytic do 100.0 1.1E-39 2.4E-44 314.3 16.7 240 60-306 27-271 (297)
268 cd05578 STKc_Yank1 Catalytic d 100.0 9.7E-40 2.1E-44 308.3 16.0 245 56-306 2-255 (258)
269 cd06652 STKc_MEKK2 Catalytic d 100.0 1.2E-39 2.7E-44 308.9 16.5 243 56-306 4-261 (265)
270 cd07839 STKc_CDK5 Catalytic do 100.0 8.7E-40 1.9E-44 313.1 15.4 248 56-306 2-281 (284)
271 PTZ00284 protein kinase; Provi 100.0 8.7E-40 1.9E-44 334.4 16.3 247 55-306 130-438 (467)
272 KOG0983 Mitogen-activated prot 100.0 1.2E-40 2.6E-45 293.0 8.5 248 55-306 93-349 (391)
273 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.2E-39 2.6E-44 312.5 16.2 249 55-306 2-283 (286)
274 cd06632 STKc_MEKK1_plant Catal 100.0 1.8E-39 3.8E-44 306.3 16.7 243 57-306 3-255 (258)
275 cd05609 STKc_MAST Catalytic do 100.0 1.8E-39 3.9E-44 314.2 17.0 247 55-307 2-271 (305)
276 cd06626 STKc_MEKK4 Catalytic d 100.0 3.4E-39 7.4E-44 305.5 18.5 244 56-306 2-261 (264)
277 cd06635 STKc_TAO1 Catalytic do 100.0 3.3E-39 7.1E-44 314.1 18.8 250 57-313 28-284 (317)
278 PHA03390 pk1 serine/threonine- 100.0 1.9E-39 4.1E-44 307.8 16.6 252 44-306 7-262 (267)
279 cd06630 STKc_MEKK1 Catalytic d 100.0 2E-39 4.4E-44 307.8 16.6 246 57-306 3-264 (268)
280 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-39 2.4E-44 309.1 14.7 248 56-306 3-257 (265)
281 cd06641 STKc_MST3 Catalytic do 100.0 2.3E-39 5E-44 309.1 16.7 242 56-306 6-253 (277)
282 cd07832 STKc_CCRK Catalytic do 100.0 2.3E-39 5E-44 310.5 16.5 248 56-306 2-282 (286)
283 cd06639 STKc_myosinIIIB Cataly 100.0 2.1E-39 4.5E-44 311.7 16.2 257 41-306 12-287 (291)
284 cd08217 STKc_Nek2 Catalytic do 100.0 2.9E-39 6.4E-44 305.8 16.8 245 56-306 2-262 (265)
285 KOG0690 Serine/threonine prote 100.0 8.7E-40 1.9E-44 294.0 12.3 242 56-306 170-424 (516)
286 cd06616 PKc_MKK4 Catalytic dom 100.0 1.7E-39 3.8E-44 311.7 15.2 248 57-306 7-267 (288)
287 cd07867 STKc_CDC2L6 Catalytic 100.0 3.2E-39 6.8E-44 314.3 17.2 243 60-306 7-314 (317)
288 cd06608 STKc_myosinIII_like Ca 100.0 4E-39 8.8E-44 306.7 17.2 247 54-306 6-272 (275)
289 cd07844 STKc_PCTAIRE_like Cata 100.0 4.2E-39 9.2E-44 309.5 17.0 249 54-306 5-288 (291)
290 cd06648 STKc_PAK_II Catalytic 100.0 3E-39 6.6E-44 309.5 15.8 241 59-306 24-269 (285)
291 cd06917 STKc_NAK1_like Catalyt 100.0 7.2E-39 1.6E-43 305.6 18.2 242 56-306 3-255 (277)
292 cd07860 STKc_CDK2_3 Catalytic 100.0 4.2E-39 9.2E-44 308.4 16.6 249 56-306 2-281 (284)
293 cd06623 PKc_MAPKK_plant_like C 100.0 5.2E-39 1.1E-43 304.2 17.0 246 56-306 3-256 (264)
294 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.1E-39 1.1E-43 307.6 17.1 247 55-306 2-261 (283)
295 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 7.4E-39 1.6E-43 307.2 18.0 251 56-307 3-267 (287)
296 cd08528 STKc_Nek10 Catalytic d 100.0 5.7E-39 1.2E-43 305.0 17.0 248 56-308 2-268 (269)
297 cd06614 STKc_PAK Catalytic dom 100.0 6E-39 1.3E-43 307.7 17.3 246 55-306 20-270 (286)
298 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.7E-39 1.4E-43 305.1 17.2 248 57-310 2-272 (273)
299 KOG4645 MAPKKK (MAP kinase kin 100.0 1.3E-40 2.9E-45 345.7 5.8 241 59-306 1240-1494(1509)
300 cd05572 STKc_cGK_PKG Catalytic 100.0 7.8E-39 1.7E-43 302.8 17.4 240 62-306 1-252 (262)
301 cd07833 STKc_CDKL Catalytic do 100.0 4.8E-39 1E-43 308.6 16.1 249 55-306 2-285 (288)
302 cd08225 STKc_Nek5 Catalytic do 100.0 8.1E-39 1.7E-43 301.7 17.1 245 56-306 2-254 (257)
303 cd07843 STKc_CDC2L1 Catalytic 100.0 6.3E-39 1.4E-43 308.7 16.6 250 54-306 5-290 (293)
304 cd07841 STKc_CDK7 Catalytic do 100.0 7E-39 1.5E-43 309.1 16.9 248 56-306 2-282 (298)
305 cd05611 STKc_Rim15_like Cataly 100.0 8E-39 1.7E-43 302.4 16.8 242 60-306 2-251 (260)
306 cd05633 STKc_GRK3 Catalytic do 100.0 9E-39 1.9E-43 305.2 16.9 239 62-306 2-255 (279)
307 cd05577 STKc_GRK Catalytic dom 100.0 9.2E-39 2E-43 304.9 16.9 242 62-306 1-254 (277)
308 KOG0666 Cyclin C-dependent kin 100.0 1.3E-39 2.7E-44 291.4 9.0 252 55-308 25-339 (438)
309 cd06657 STKc_PAK4 Catalytic do 100.0 1.6E-38 3.5E-43 305.3 17.1 240 60-306 26-270 (292)
310 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.5E-38 3.2E-43 305.7 16.6 249 55-306 6-288 (291)
311 cd07835 STKc_CDK1_like Catalyt 100.0 2.1E-38 4.5E-43 303.4 17.3 248 57-306 2-280 (283)
312 cd05122 PKc_STE Catalytic doma 100.0 2.5E-38 5.4E-43 297.0 17.5 246 56-306 2-251 (253)
313 cd06634 STKc_TAO2 Catalytic do 100.0 2.2E-38 4.9E-43 306.9 17.5 245 57-308 18-269 (308)
314 KOG0986 G protein-coupled rece 100.0 1E-39 2.2E-44 305.5 7.7 256 45-306 178-446 (591)
315 KOG0586 Serine/threonine prote 100.0 8.9E-39 1.9E-43 311.1 14.5 248 51-309 53-309 (596)
316 cd08226 PK_STRAD_beta Pseudoki 100.0 2.4E-38 5.2E-43 309.5 17.7 246 61-307 5-309 (328)
317 KOG0604 MAP kinase-activated p 100.0 3.5E-39 7.6E-44 287.2 10.6 249 49-307 59-323 (400)
318 cd06633 STKc_TAO3 Catalytic do 100.0 3.1E-38 6.6E-43 306.6 17.9 242 58-306 25-273 (313)
319 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.8E-38 6.1E-43 299.4 17.0 243 56-306 4-261 (264)
320 PHA03210 serine/threonine kina 100.0 8E-39 1.7E-43 328.5 14.0 251 54-306 148-454 (501)
321 cd06627 STKc_Cdc7_like Catalyt 100.0 3.7E-38 7.9E-43 296.5 16.6 243 56-306 2-251 (254)
322 PHA02882 putative serine/threo 100.0 3E-38 6.4E-43 303.9 16.0 251 54-308 12-294 (294)
323 cd07831 STKc_MOK Catalytic dom 100.0 4E-38 8.7E-43 301.2 16.8 247 56-306 1-279 (282)
324 cd07845 STKc_CDK10 Catalytic d 100.0 5.1E-38 1.1E-42 304.7 17.7 253 52-307 5-291 (309)
325 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.1E-38 1.1E-42 308.3 17.8 248 55-306 6-291 (337)
326 cd07850 STKc_JNK Catalytic dom 100.0 5.6E-38 1.2E-42 310.0 18.1 246 55-306 17-311 (353)
327 PLN00009 cyclin-dependent kina 100.0 4.4E-38 9.5E-43 302.9 16.8 251 54-306 2-284 (294)
328 cd05606 STKc_beta_ARK Catalyti 100.0 7.6E-38 1.7E-42 298.7 18.1 239 62-306 2-255 (278)
329 cd06606 STKc_MAPKKK Catalytic 100.0 5.7E-38 1.2E-42 295.8 17.0 245 56-306 2-257 (260)
330 cd08215 STKc_Nek Catalytic dom 100.0 7.2E-38 1.6E-42 295.0 17.5 245 56-306 2-255 (258)
331 cd05579 STKc_MAST_like Catalyt 100.0 3.4E-38 7.4E-43 298.6 15.2 236 62-306 1-254 (265)
332 cd08530 STKc_CNK2-like Catalyt 100.0 5.8E-38 1.3E-42 295.6 16.7 245 56-306 2-253 (256)
333 cd07849 STKc_ERK1_2_like Catal 100.0 2.6E-38 5.7E-43 310.3 14.5 247 55-306 6-292 (336)
334 cd07842 STKc_CDK8_like Catalyt 100.0 6.1E-38 1.3E-42 305.1 16.9 249 56-306 2-313 (316)
335 cd07840 STKc_CDK9_like Catalyt 100.0 5.2E-38 1.1E-42 301.1 16.1 248 56-306 1-284 (287)
336 cd08216 PK_STRAD Pseudokinase 100.0 9.1E-38 2E-42 303.6 17.8 244 62-307 10-296 (314)
337 KOG0612 Rho-associated, coiled 100.0 9.7E-39 2.1E-43 327.9 11.3 253 47-307 68-339 (1317)
338 cd07837 STKc_CdkB_plant Cataly 100.0 4.7E-38 1E-42 302.8 15.5 249 56-306 3-291 (295)
339 KOG0584 Serine/threonine prote 100.0 4.9E-39 1.1E-43 313.3 8.4 239 61-306 47-296 (632)
340 cd07855 STKc_ERK5 Catalytic do 100.0 7E-38 1.5E-42 307.0 16.6 248 56-307 7-295 (334)
341 PLN00113 leucine-rich repeat r 100.0 1.9E-37 4.2E-42 344.8 22.2 245 59-314 695-955 (968)
342 cd07836 STKc_Pho85 Catalytic d 100.0 5.3E-38 1.1E-42 300.7 14.8 249 56-306 2-281 (284)
343 cd07830 STKc_MAK_like Catalyti 100.0 2E-37 4.3E-42 296.6 18.8 248 57-306 2-280 (283)
344 cd05581 STKc_PDK1 Catalytic do 100.0 6.7E-38 1.5E-42 299.2 15.3 243 55-306 2-277 (280)
345 cd07834 STKc_MAPK Catalytic do 100.0 8.3E-38 1.8E-42 306.1 16.1 247 56-306 2-289 (330)
346 cd05118 STKc_CMGC Catalytic do 100.0 8.3E-38 1.8E-42 299.1 15.6 248 56-306 1-280 (283)
347 cd07838 STKc_CDK4_6_like Catal 100.0 2.9E-37 6.3E-42 296.0 19.2 248 57-306 2-284 (287)
348 cd06618 PKc_MKK7 Catalytic dom 100.0 1.6E-37 3.6E-42 299.2 17.6 249 53-307 14-274 (296)
349 cd07852 STKc_MAPK15 Catalytic 100.0 1.6E-37 3.4E-42 305.0 17.6 246 56-306 9-295 (337)
350 KOG1006 Mitogen-activated prot 100.0 1.1E-39 2.4E-44 285.8 2.0 247 59-306 69-327 (361)
351 cd05613 STKc_MSK1_N N-terminal 100.0 1.2E-37 2.7E-42 299.2 16.1 246 56-306 2-268 (290)
352 cd07865 STKc_CDK9 Catalytic do 100.0 2E-37 4.3E-42 300.6 17.7 251 53-306 11-307 (310)
353 cd05583 STKc_MSK_N N-terminal 100.0 1.5E-37 3.3E-42 298.2 15.4 249 56-309 2-266 (288)
354 cd07879 STKc_p38delta_MAPK13 C 100.0 2.2E-37 4.9E-42 304.3 16.9 264 42-311 2-304 (342)
355 KOG4250 TANK binding protein k 100.0 7.6E-38 1.6E-42 308.7 13.4 192 60-252 19-227 (732)
356 KOG0607 MAP kinase-interacting 100.0 1.8E-37 4E-42 278.4 14.6 254 42-306 74-361 (463)
357 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.5E-37 5.3E-42 304.3 16.3 260 39-306 5-300 (345)
358 KOG0662 Cyclin-dependent kinas 100.0 1E-37 2.2E-42 258.3 11.3 248 56-306 4-283 (292)
359 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.9E-37 4.1E-42 304.8 15.2 248 54-306 5-300 (342)
360 cd07829 STKc_CDK_like Catalyti 100.0 6.4E-37 1.4E-41 292.8 18.2 247 57-306 2-279 (282)
361 cd08222 STKc_Nek11 Catalytic d 100.0 3.4E-37 7.5E-42 291.2 16.0 244 56-306 2-257 (260)
362 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.8E-37 6E-42 301.6 15.3 251 48-306 7-288 (328)
363 cd07864 STKc_CDK12 Catalytic d 100.0 4.3E-37 9.2E-42 297.2 16.4 247 56-306 9-299 (302)
364 cd05123 STKc_AGC Catalytic dom 100.0 6.6E-37 1.4E-41 287.4 17.2 236 62-306 1-247 (250)
365 KOG0603 Ribosomal protein S6 k 100.0 1.3E-37 2.8E-42 304.6 11.7 243 52-309 320-566 (612)
366 PTZ00024 cyclin-dependent prot 100.0 4.3E-37 9.3E-42 301.6 15.3 244 60-307 15-314 (335)
367 cd07866 STKc_BUR1 Catalytic do 100.0 7.6E-37 1.7E-41 296.6 16.7 250 54-306 8-308 (311)
368 cd05576 STKc_RPK118_like Catal 100.0 6.1E-37 1.3E-41 285.3 14.9 224 65-306 4-234 (237)
369 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.6E-37 1.4E-41 301.0 15.9 247 55-306 16-298 (343)
370 KOG0696 Serine/threonine prote 100.0 8.4E-38 1.8E-42 289.2 8.9 234 56-298 351-593 (683)
371 cd07851 STKc_p38 Catalytic dom 100.0 4.8E-37 1E-41 302.1 13.7 248 54-306 15-298 (343)
372 KOG4236 Serine/threonine prote 100.0 2E-37 4.3E-42 294.5 10.3 241 60-306 570-819 (888)
373 cd07857 STKc_MPK1 Catalytic do 100.0 1.6E-36 3.5E-41 297.1 17.1 247 56-306 2-292 (332)
374 KOG0669 Cyclin T-dependent kin 100.0 3E-38 6.5E-43 274.8 3.9 250 56-308 19-317 (376)
375 KOG1035 eIF-2alpha kinase GCN2 100.0 5.6E-37 1.2E-41 317.4 13.8 248 47-306 475-871 (1351)
376 cd05610 STKc_MASTL Catalytic d 100.0 1.6E-36 3.6E-41 320.8 16.8 146 53-201 3-152 (669)
377 KOG0671 LAMMER dual specificit 100.0 6.4E-37 1.4E-41 281.8 10.1 249 55-306 90-406 (415)
378 KOG3653 Transforming growth fa 100.0 5.8E-36 1.3E-40 282.2 15.8 252 57-315 213-508 (534)
379 KOG0587 Traf2- and Nck-interac 100.0 3.7E-36 8E-41 302.3 14.9 244 57-306 22-282 (953)
380 KOG1025 Epidermal growth facto 100.0 1.5E-36 3.1E-41 302.1 11.4 249 57-313 699-960 (1177)
381 KOG2052 Activin A type IB rece 100.0 1.1E-35 2.3E-40 278.4 14.7 249 57-312 214-505 (513)
382 KOG0200 Fibroblast/platelet-de 100.0 2E-35 4.3E-40 308.0 17.0 250 58-311 300-580 (609)
383 KOG1151 Tousled-like protein k 100.0 1E-35 2.2E-40 277.7 11.8 247 56-306 465-741 (775)
384 KOG0614 cGMP-dependent protein 100.0 1.6E-36 3.4E-41 287.5 4.3 249 53-308 419-679 (732)
385 KOG0668 Casein kinase II, alph 100.0 8.4E-36 1.8E-40 256.1 7.4 259 39-306 23-322 (338)
386 smart00220 S_TKc Serine/Threon 100.0 2.1E-34 4.6E-39 268.4 16.2 233 66-306 1-241 (244)
387 KOG0608 Warts/lats-like serine 100.0 3.8E-35 8.2E-40 284.4 10.5 259 42-306 617-928 (1034)
388 KOG0984 Mitogen-activated prot 100.0 2.7E-35 5.8E-40 249.3 8.2 198 58-256 50-259 (282)
389 PLN03225 Serine/threonine-prot 100.0 1E-34 2.2E-39 299.8 14.1 249 53-306 131-450 (566)
390 KOG0695 Serine/threonine prote 100.0 4E-35 8.6E-40 265.0 9.0 240 54-298 250-502 (593)
391 PLN03224 probable serine/threo 100.0 1.2E-33 2.5E-38 284.8 18.7 252 55-307 146-501 (507)
392 KOG0664 Nemo-like MAPK-related 100.0 1.9E-35 4.1E-40 260.1 4.8 246 60-309 59-346 (449)
393 KOG1027 Serine/threonine prote 100.0 6.8E-34 1.5E-38 284.7 7.8 240 53-306 511-767 (903)
394 KOG0576 Mitogen-activated prot 100.0 8.7E-34 1.9E-38 277.0 7.6 248 54-306 15-271 (829)
395 KOG0670 U4/U6-associated splic 100.0 5.2E-33 1.1E-37 264.3 10.2 250 54-306 432-746 (752)
396 KOG0665 Jun-N-terminal kinase 100.0 1.2E-32 2.5E-37 248.1 9.5 243 57-306 20-310 (369)
397 KOG1290 Serine/threonine prote 100.0 2E-31 4.3E-36 252.2 14.5 137 49-187 71-222 (590)
398 KOG1024 Receptor-like protein 100.0 4.4E-32 9.6E-37 249.9 9.3 252 57-313 287-558 (563)
399 KOG1152 Signal transduction se 100.0 3.5E-32 7.7E-37 261.7 8.3 199 49-250 556-770 (772)
400 cd00180 PKc Catalytic domain o 100.0 1.1E-30 2.4E-35 237.5 17.6 207 62-307 1-215 (215)
401 KOG1345 Serine/threonine kinas 100.0 3.1E-31 6.7E-36 233.5 12.2 245 56-306 26-284 (378)
402 KOG1167 Serine/threonine prote 100.0 1.6E-30 3.5E-35 242.9 11.2 244 55-306 37-381 (418)
403 smart00221 STYKc Protein kinas 100.0 1E-29 2.3E-34 234.2 14.8 192 57-251 2-202 (225)
404 PLN00181 protein SPA1-RELATED; 100.0 2.3E-29 5E-34 272.9 7.5 192 106-307 28-266 (793)
405 KOG0195 Integrin-linked kinase 100.0 2E-29 4.3E-34 222.2 5.4 254 52-311 188-447 (448)
406 smart00750 KIND kinase non-cat 99.9 4.3E-28 9.3E-33 214.9 10.1 168 135-313 1-172 (176)
407 KOG1164 Casein kinase (serine/ 99.9 2.4E-26 5.2E-31 223.2 18.4 257 55-314 19-301 (322)
408 KOG1163 Casein kinase (serine/ 99.9 2.7E-27 5.8E-32 205.4 10.3 265 42-315 7-289 (341)
409 KOG1165 Casein kinase (serine/ 99.9 9.1E-27 2E-31 211.0 12.2 254 56-314 30-303 (449)
410 PRK09188 serine/threonine prot 99.9 1.5E-25 3.2E-30 216.9 13.8 164 56-233 20-210 (365)
411 COG0515 SPS1 Serine/threonine 99.9 1.2E-23 2.7E-28 205.0 16.8 248 56-306 2-275 (384)
412 cd05147 RIO1_euk RIO kinase fa 99.9 4.6E-24 9.9E-29 190.1 11.8 140 59-204 2-168 (190)
413 PRK10359 lipopolysaccharide co 99.9 6E-24 1.3E-28 191.2 10.2 168 55-243 32-216 (232)
414 KOG0590 Checkpoint kinase and 99.9 1.5E-24 3.2E-29 223.6 5.8 242 59-306 323-585 (601)
415 cd05145 RIO1_like RIO kinase f 99.9 8.9E-23 1.9E-27 182.6 13.2 142 58-205 1-169 (190)
416 KOG0603 Ribosomal protein S6 k 99.9 1E-23 2.2E-28 207.3 3.7 224 62-300 2-232 (612)
417 KOG1240 Protein kinase contain 99.9 4.1E-23 8.8E-28 213.0 6.6 243 55-307 24-292 (1431)
418 PRK12274 serine/threonine prot 99.9 1.3E-21 2.9E-26 172.1 11.3 180 58-252 6-210 (218)
419 KOG1023 Natriuretic peptide re 99.9 5.2E-22 1.1E-26 195.5 9.4 209 104-314 1-228 (484)
420 KOG0553 TPR repeat-containing 99.9 2.7E-21 5.9E-26 174.2 11.4 107 379-486 77-183 (304)
421 PRK10345 hypothetical protein; 99.9 3.8E-21 8.2E-26 172.8 11.8 133 60-200 8-156 (210)
422 PF14531 Kinase-like: Kinase-l 99.8 1.4E-21 3.1E-26 181.2 6.0 227 59-297 17-288 (288)
423 KOG4158 BRPK/PTEN-induced prot 99.8 1.5E-20 3.2E-25 174.7 11.0 191 108-307 274-511 (598)
424 smart00090 RIO RIO-like kinase 99.8 5.9E-20 1.3E-24 169.3 12.9 158 41-205 15-200 (237)
425 PRK14879 serine/threonine prot 99.8 1.5E-19 3.3E-24 165.0 12.8 134 60-202 2-143 (211)
426 KOG1033 eIF-2alpha kinase PEK/ 99.8 2.1E-20 4.5E-25 180.7 4.1 168 124-303 330-509 (516)
427 KOG1166 Mitotic checkpoint ser 99.8 1.6E-19 3.5E-24 190.0 9.9 240 55-312 699-955 (974)
428 cd05144 RIO2_C RIO kinase fami 99.8 7.5E-19 1.6E-23 158.5 11.9 137 56-205 17-177 (198)
429 TIGR03724 arch_bud32 Kae1-asso 99.8 7.2E-19 1.6E-23 159.0 11.6 129 62-202 2-138 (199)
430 KOG0606 Microtubule-associated 99.8 2.2E-19 4.8E-24 185.5 5.7 200 56-298 85-304 (1205)
431 PRK09605 bifunctional UGMP fam 99.8 3.1E-18 6.6E-23 177.6 12.6 133 58-203 337-477 (535)
432 cd05119 RIO RIO kinase family, 99.7 2E-17 4.2E-22 148.0 11.2 138 59-205 2-166 (187)
433 cd05120 APH_ChoK_like Aminogly 99.7 1.6E-17 3.5E-22 142.9 9.9 135 58-205 2-141 (155)
434 PRK01723 3-deoxy-D-manno-octul 99.7 7.1E-17 1.5E-21 149.1 12.3 133 62-203 39-192 (239)
435 KOG0590 Checkpoint kinase and 99.7 3.4E-18 7.5E-23 176.6 3.6 250 53-306 19-286 (601)
436 PRK15359 type III secretion sy 99.7 3.2E-16 6.9E-21 133.1 11.8 103 383-486 24-126 (144)
437 KOG0548 Molecular co-chaperone 99.7 1E-16 2.2E-21 154.6 9.7 103 383-486 358-460 (539)
438 KOG0548 Molecular co-chaperone 99.7 3.8E-16 8.2E-21 150.8 10.0 103 383-486 2-104 (539)
439 KOG4234 TPR repeat-containing 99.7 8.9E-16 1.9E-20 129.9 10.8 109 378-486 90-202 (271)
440 KOG0601 Cyclin-dependent kinas 99.6 1.1E-15 2.4E-20 151.1 7.7 241 57-306 117-379 (524)
441 KOG4648 Uncharacterized conser 99.6 5E-15 1.1E-19 135.2 11.4 104 381-485 95-198 (536)
442 PLN03088 SGT1, suppressor of 99.6 5.6E-15 1.2E-19 144.6 12.0 102 384-486 3-104 (356)
443 KOG0547 Translocase of outer m 99.6 4.1E-15 8.9E-20 141.7 10.2 98 378-476 110-207 (606)
444 PRK15363 pathogenicity island 99.6 1.3E-14 2.9E-19 120.8 11.8 101 381-482 33-133 (157)
445 TIGR01982 UbiB 2-polyprenylphe 99.6 5.4E-15 1.2E-19 148.4 11.0 140 60-204 123-308 (437)
446 KOG0543 FKBP-type peptidyl-pro 99.6 7.5E-15 1.6E-19 138.3 10.9 109 378-486 203-325 (397)
447 PRK11189 lipoprotein NlpI; Pro 99.6 3.3E-14 7.1E-19 136.2 13.2 105 381-486 62-166 (296)
448 TIGR02552 LcrH_SycD type III s 99.5 1.3E-13 2.9E-18 116.1 12.3 105 381-486 15-119 (135)
449 PRK10370 formate-dependent nit 99.5 1.8E-13 3.9E-18 122.5 12.0 107 379-486 69-178 (198)
450 KOG4626 O-linked N-acetylgluco 99.5 7.3E-14 1.6E-18 136.6 9.9 106 381-487 386-491 (966)
451 cd05151 ChoK Choline Kinase (C 99.5 1.7E-13 3.8E-18 120.3 10.2 129 59-202 3-136 (170)
452 PRK04750 ubiB putative ubiquin 99.5 2.8E-14 6.1E-19 144.8 5.3 144 53-205 119-316 (537)
453 KOG1266 Protein kinase [Signal 99.4 7.4E-14 1.6E-18 127.5 5.5 200 102-309 119-334 (458)
454 KOG1243 Protein kinase [Genera 99.4 6.7E-13 1.5E-17 132.7 12.7 163 75-246 34-200 (690)
455 KOG0545 Aryl-hydrocarbon recep 99.4 4.3E-13 9.4E-18 117.3 9.7 123 362-484 157-296 (329)
456 KOG0601 Cyclin-dependent kinas 99.4 2.6E-13 5.7E-18 134.3 7.8 243 57-311 268-519 (524)
457 KOG4626 O-linked N-acetylgluco 99.4 5.1E-13 1.1E-17 130.8 9.5 105 379-484 350-454 (966)
458 KOG0550 Molecular chaperone (D 99.4 4.3E-13 9.2E-18 125.7 8.0 104 381-484 247-353 (486)
459 PF13414 TPR_11: TPR repeat; P 99.4 5.5E-13 1.2E-17 98.0 6.8 67 417-483 2-69 (69)
460 cd05146 RIO3_euk RIO kinase fa 99.4 2.9E-12 6.4E-17 113.1 12.6 137 59-204 2-175 (197)
461 TIGR00990 3a0801s09 mitochondr 99.4 2.3E-12 4.9E-17 136.7 13.6 104 379-484 123-226 (615)
462 PF13414 TPR_11: TPR repeat; P 99.4 7.1E-13 1.5E-17 97.4 6.2 67 382-449 2-69 (69)
463 TIGR02795 tol_pal_ybgF tol-pal 99.4 7E-12 1.5E-16 102.9 11.5 103 383-486 2-110 (119)
464 KOG4642 Chaperone-dependent E3 99.4 1.9E-12 4.1E-17 113.0 7.6 99 382-481 9-107 (284)
465 KOG0624 dsRNA-activated protei 99.3 3.2E-12 6.9E-17 117.1 9.2 107 378-485 33-139 (504)
466 KOG1125 TPR repeat-containing 99.3 1.4E-12 3E-17 127.4 7.2 104 381-485 428-531 (579)
467 KOG0551 Hsp90 co-chaperone CNS 99.3 2.5E-12 5.4E-17 117.5 8.1 106 380-485 78-186 (390)
468 COG3063 PilF Tfp pilus assembl 99.3 1.1E-11 2.4E-16 108.1 11.6 102 383-485 69-172 (250)
469 KOG0376 Serine-threonine phosp 99.3 7.4E-13 1.6E-17 127.3 4.5 104 382-486 3-106 (476)
470 KOG1126 DNA-binding cell divis 99.3 1.2E-12 2.7E-17 129.7 6.1 105 381-486 419-523 (638)
471 cd00189 TPR Tetratricopeptide 99.3 1.4E-11 3E-16 95.8 10.6 99 385-484 2-100 (100)
472 PRK02603 photosystem I assembl 99.3 1.9E-11 4E-16 107.5 12.3 107 379-485 31-153 (172)
473 TIGR00990 3a0801s09 mitochondr 99.3 1.2E-11 2.7E-16 131.0 13.3 101 383-484 365-465 (615)
474 cd05154 ACAD10_11_like Acyl-Co 99.3 1.5E-11 3.3E-16 112.9 11.9 140 60-202 4-206 (223)
475 PF12895 Apc3: Anaphase-promot 99.3 4.2E-12 9.2E-17 97.2 5.7 83 395-478 1-84 (84)
476 CHL00033 ycf3 photosystem I as 99.3 4.6E-11 1E-15 104.6 12.7 107 379-485 31-153 (168)
477 KOG0606 Microtubule-associated 99.3 2.1E-12 4.5E-17 134.6 4.4 242 53-301 803-1084(1205)
478 KOG4555 TPR repeat-containing 99.3 8.1E-11 1.8E-15 93.1 12.2 102 380-482 40-145 (175)
479 COG3642 Mn2+-dependent serine/ 99.3 4E-11 8.7E-16 102.1 11.3 131 61-203 3-141 (204)
480 PRK09782 bacteriophage N4 rece 99.3 3.1E-11 6.6E-16 131.5 13.2 103 383-486 609-711 (987)
481 PRK11189 lipoprotein NlpI; Pro 99.2 5.8E-11 1.3E-15 113.8 12.3 97 381-479 96-192 (296)
482 KOG3087 Serine/threonine prote 99.2 6.8E-11 1.5E-15 100.2 10.7 144 58-203 11-166 (229)
483 PRK12370 invasion protein regu 99.2 4.5E-11 9.8E-16 124.7 12.0 99 382-481 337-435 (553)
484 KOG0547 Translocase of outer m 99.2 8E-11 1.7E-15 112.8 12.3 102 383-485 326-427 (606)
485 PRK15179 Vi polysaccharide bio 99.2 1E-10 2.3E-15 122.7 14.4 109 377-486 80-188 (694)
486 PRK15359 type III secretion sy 99.2 5E-11 1.1E-15 101.2 9.2 85 380-465 55-139 (144)
487 PLN02789 farnesyltranstransfer 99.2 3.9E-10 8.5E-15 108.1 15.0 107 379-486 67-176 (320)
488 PRK12370 invasion protein regu 99.2 1.5E-10 3.2E-15 120.9 11.7 103 381-484 370-473 (553)
489 PRK15331 chaperone protein Sic 99.2 2.1E-10 4.6E-15 96.1 10.3 99 381-480 35-133 (165)
490 PF13432 TPR_16: Tetratricopep 99.2 5E-11 1.1E-15 86.3 5.8 63 423-485 2-64 (65)
491 COG3063 PilF Tfp pilus assembl 99.2 2.1E-10 4.6E-15 100.2 10.6 104 379-484 31-134 (250)
492 KOG3741 Poly(A) ribonuclease s 99.2 4.2E-10 9.2E-15 109.5 13.2 216 66-307 288-522 (655)
493 TIGR03302 OM_YfiO outer membra 99.1 2.2E-10 4.8E-15 106.2 10.7 105 381-486 31-149 (235)
494 PF13432 TPR_16: Tetratricopep 99.1 1.5E-10 3.4E-15 83.7 7.5 65 387-452 1-65 (65)
495 PF01163 RIO1: RIO1 family; I 99.1 2.1E-10 4.5E-15 101.1 9.6 126 69-204 1-157 (188)
496 KOG1126 DNA-binding cell divis 99.1 1.5E-10 3.1E-15 115.3 9.4 104 381-485 487-590 (638)
497 PRK15123 lipopolysaccharide co 99.1 3.9E-10 8.4E-15 105.4 11.9 132 69-202 37-194 (268)
498 COG5010 TadD Flp pilus assembl 99.1 4.2E-10 9E-15 100.5 11.3 104 380-484 97-200 (257)
499 TIGR02521 type_IV_pilW type IV 99.1 4.7E-10 1E-14 103.0 12.3 104 381-485 63-168 (234)
500 PRK10370 formate-dependent nit 99.1 3.3E-10 7.1E-15 101.4 10.5 91 395-486 51-144 (198)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-54 Score=422.68 Aligned_cols=274 Identities=35% Similarity=0.621 Sum_probs=237.2
Q ss_pred CccccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccc
Q 011349 37 GFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116 (488)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 116 (488)
..+.|++.++..||++|+..+++ |+|+||.||+|.+.+|+.||||++........++|.+|+.++.+++|||+|+++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 57789999999999999999888 999999999999999999999988776533145699999999999999999999
Q ss_pred cceecCC-eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccccccCCceeecCCCCCe
Q 011349 117 GCCCEGE-ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 117 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~iiH~Dlkp~Nill~~~~~~k 193 (488)
|||.+.+ ..+||+|||++|+|.++|+.....+++|.++++|+.++|+||+|||+.. +||||||||+|||||+++++|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999988 5999999999999999998643338999999999999999999999965 599999999999999999999
Q ss_pred eccCCCcccCCC-CCcc----ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcc-----------hhhhh
Q 011349 194 LSCFGLMKNSRD-GKSY----STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH-----------ALDLI 257 (488)
Q Consensus 194 l~Dfgla~~~~~-~~~~----~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~-----------~~~~~ 257 (488)
|+|||+|+.... .... .||.+|+|||++..+..+.++|||||||+|+||+||+++.... ....+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999987654 3322 7899999999999999999999999999999999999765421 12234
Q ss_pred hccccccccccccC-CCCCh-hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 258 RGKNFLMLMDSCLE-GHFSN-DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 258 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
....+.+++|+.+. ..++. .....+..++.+|++.+|.+||+|.+|++.|+.+...
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 44567788888876 55554 4667799999999999999999999999999665544
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-54 Score=395.94 Aligned_cols=246 Identities=20% Similarity=0.256 Sum_probs=209.8
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCe-eeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE-RLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~lv~e~ 131 (488)
+-..++.||+|..|+||++.++ +++.+|+|++..... ...+++.+|+++++.++||+||.+||+|..+.. ++|+|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 3456788999999999999954 688899999965432 335689999999999999999999999999985 9999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 208 (488)
|+||||++++. ..+++++....+|+.+|++||.|||+ .+ ||||||||+|||++..|.+||||||.++...+. .+
T Consensus 160 MDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t 236 (364)
T KOG0581|consen 160 MDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT 236 (364)
T ss_pred cCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence 99999999997 44779999999999999999999996 56 999999999999999999999999999876554 57
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc---cCCCCChh-hHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC---LEGHFSND-DGTELVR 284 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~l~~ 284 (488)
+.||..|||||.+++..|+.++||||||++++|+.+|+.|++..... ...+.+++..+ ..+..|.. +++++++
T Consensus 237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~---~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~ 313 (364)
T KOG0581|consen 237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP---YLDIFELLCAIVDEPPPRLPEGEFSPEFRS 313 (364)
T ss_pred ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC---CCCHHHHHHHHhcCCCCCCCcccCCHHHHH
Confidence 89999999999999999999999999999999999999887664111 11112222221 23345554 7899999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++..||++||.+|||+.++++|
T Consensus 314 FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 314 FVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHHHhcCCcccCCCHHHHhcC
Confidence 9999999999999999999998
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-52 Score=401.92 Aligned_cols=253 Identities=27% Similarity=0.405 Sum_probs=216.4
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCC-eeeEEEecCCC
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGE-ERLLVAEFMPN 134 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~ 134 (488)
+...+|+|+||+||+|.+.....||||++....... .+.|.+|+.+|.+++|||||+++|+|..+. ..+|||||+++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 344579999999999999655559999998655333 458999999999999999999999998887 79999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCC---C-Ccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRD---G-KSY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~---~-~~~ 209 (488)
|+|.+++.......+++..++.|+.||++||.|||++++||||||||+|||++.++ ++||+|||+++.... . ...
T Consensus 125 GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~ 204 (362)
T KOG0192|consen 125 GSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSV 204 (362)
T ss_pred CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCC
Confidence 99999997544678999999999999999999999998789999999999999998 999999999986553 2 236
Q ss_pred ccccCCCCccccc--cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 210 STNLAFTPPEYLR--TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 210 ~~t~~y~aPE~~~--~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
.||+.|||||++. ...++.|+|||||||++|||+||+.||..... ......+.....++.++..+++.+..|+.
T Consensus 205 ~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~----~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~ 280 (362)
T KOG0192|consen 205 AGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP----VQVASAVVVGGLRPPIPKECPPHLSSLME 280 (362)
T ss_pred CCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhcCCCCCCCccCCHHHHHHHH
Confidence 8899999999999 56899999999999999999999998876532 11122233344555666668899999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+||..||..||++.+++..|+.+....
T Consensus 281 ~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 281 RCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred HhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999887754
No 4
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-50 Score=375.52 Aligned_cols=248 Identities=19% Similarity=0.236 Sum_probs=205.7
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..+|.+.++||+|+||+||+|+ .+++..||||.+.... ....+.+..|+.+|+.++|||||.+++++..++.+||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 3456777889999999999999 4568999999998764 233566889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC------CCCeeccCCCcccC
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD------GNPRLSCFGLMKNS 203 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~------~~~kl~Dfgla~~~ 203 (488)
|||.||+|.++|+ ..+.+++..+..++.||+.||++||+++ ||||||||+||||+.. -.+||+|||+|+..
T Consensus 89 EyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 9999999999998 4567999999999999999999999999 9999999999999754 45899999999988
Q ss_pred CCCC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 204 RDGK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 204 ~~~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
.+.. +.+|++-|||||+++.++|+.|+|+||+|++||+|++|+.||........... -.......+..+...+.
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~---~~k~~~~~~~~~~~~s~ 242 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLY---IKKGNEIVPVLPAELSN 242 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH---HhccccccCchhhhccC
Confidence 7653 67999999999999999999999999999999999999999876543332220 00011112223333445
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+++...+..+|.+|-++.+...+
T Consensus 243 ~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 243 PLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred chhhhhhHHHhcCccccCchHHhhhh
Confidence 56788888888999999877776665
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-50 Score=389.20 Aligned_cols=252 Identities=27% Similarity=0.394 Sum_probs=221.8
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.++++||+|-||.||.|.+.....||||.++... ...+.|.+|+++|.+|+|+|||+++++|..++.++||||||+.|+
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence 4678899999999999999888789999998764 345789999999999999999999999999889999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-----ccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-----YST 211 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-----~~~ 211 (488)
|.++|....+..+...+.+.++.|||+|++||++++ +|||||-..|||++++..+||+|||||+...+..- ..-
T Consensus 288 Ll~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kf 366 (468)
T KOG0197|consen 288 LLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKF 366 (468)
T ss_pred HHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCC
Confidence 999998766788999999999999999999999999 99999999999999999999999999995544321 112
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
...|.|||.+..++++.+||||||||+||||+|-...++.. +....+.+.++...+-+.|..||+++.+|+..||+
T Consensus 367 PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~----msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~ 442 (468)
T KOG0197|consen 367 PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG----MSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWH 442 (468)
T ss_pred CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC----CCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhh
Confidence 46799999999999999999999999999999966554333 34455566777777778889999999999999999
Q ss_pred CCCCCCCCHHHHHHHhchhhccc
Q 011349 292 YEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 292 ~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.+|++|||++.+...|+.+....
T Consensus 443 ~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 443 EDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred CCcccCCCHHHHHHHHHHhhhcc
Confidence 99999999999999988876643
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-51 Score=378.01 Aligned_cols=249 Identities=20% Similarity=0.232 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC-------hHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD-------SRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
+.|.+.+.||+|+||.|-+|. ..+|+.||||+++...... ...+.+|+++|++|+|||||+++++|...+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 446677889999999999999 6789999999998654222 23467999999999999999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeeccCCCccc
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKN 202 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~ 202 (488)
|+||||++||.|.+.+. .++.+.+....-++.|++.|+.|||+.| |+||||||+|||+..+ ..+||+|||+|+.
T Consensus 252 YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred EEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhhc
Confidence 99999999999999997 5677888889999999999999999999 9999999999999755 7899999999998
Q ss_pred CCCC---CccccccCCCCccccccCCc---ccCCceEeehHHHHHHhhCCCCCCcchhhh-hhccccccccccccCCCCC
Q 011349 203 SRDG---KSYSTNLAFTPPEYLRTGRV---IPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 203 ~~~~---~~~~~t~~y~aPE~~~~~~~---~~~sDv~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 275 (488)
.... .+.+|||.|.|||++.+..+ ..+.|+||+||+||-+++|.+||.+...+. ...+...... ...+..-
T Consensus 329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y--~f~p~~w 406 (475)
T KOG0615|consen 329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY--AFGPLQW 406 (475)
T ss_pred cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc--cccChhh
Confidence 8654 47899999999999987543 347899999999999999999997764333 1111110000 0111122
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
..++.+..+||.+||..||++|||+.++|+|-
T Consensus 407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hp 438 (475)
T KOG0615|consen 407 DRISEEALDLINWMLVVDPENRPSADEALNHP 438 (475)
T ss_pred hhhhHHHHHHHHHhhEeCcccCcCHHHHhcCh
Confidence 34678899999999999999999999999983
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-51 Score=362.82 Aligned_cols=248 Identities=19% Similarity=0.265 Sum_probs=206.5
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCccccc-ceecCCe-eeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIG-CCCEGEE-RLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~-~~~~~~~-~~lv~ 129 (488)
.+.|+++||+|+||.||++. ..+|..||.|.++-..... .+.+..|+.+|++|+|||||++++ .+..+.. ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 45788899999999999999 7789999999998554332 457899999999999999999999 4444444 89999
Q ss_pred ecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 130 EFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSK---GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 130 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~---~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
|||.+|+|...|++. ..+.+++..+|+++.|++.||..+|++ +-|+||||||.||+|+.+|.+||+||||++...
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 999999999999753 557899999999999999999999993 338999999999999999999999999999887
Q ss_pred CCC----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC-hhhH
Q 011349 205 DGK----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS-NDDG 279 (488)
Q Consensus 205 ~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 279 (488)
... +.+|||.||+||.+.+.+|+++|||||+||++|||+.-.+||.+........ .+.+.--++.| ...+
T Consensus 180 s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~-----KI~qgd~~~~p~~~YS 254 (375)
T KOG0591|consen 180 SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCK-----KIEQGDYPPLPDEHYS 254 (375)
T ss_pred chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHH-----HHHcCCCCCCcHHHhh
Confidence 654 5689999999999999999999999999999999999999998763222211 11122122233 4567
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.++..||..|+..||+.||+.-.++..+
T Consensus 255 ~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 255 TDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred hHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 8999999999999999999965555443
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-50 Score=387.24 Aligned_cols=245 Identities=18% Similarity=0.205 Sum_probs=212.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|...+.||+|+|+.||+++. ++|..||+|++.+.. ....+.+.+||++.++|+|||||+++++|.+.+++|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 3467777889999999999995 899999999997643 233567999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
|+|++++|..+++ .+.++++.++..++.||+.||.|||+.+ |||||||..|++++++.++||+|||||......
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 9999999999887 6788999999999999999999999999 999999999999999999999999999877633
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
.+.+|||.|+|||++.....+..+||||+||++|-|++|++||........-.. +.. ..-.+|...+.+..+|
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~----Ik~--~~Y~~P~~ls~~A~dL 248 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNK----IKL--NEYSMPSHLSAEAKDL 248 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHH----HHh--cCcccccccCHHHHHH
Confidence 478999999999999988999999999999999999999999876532221111 000 1112445667889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
|.++|+.+|.+|||+++|+.|=
T Consensus 249 I~~lL~~~P~~Rpsl~~vL~h~ 270 (592)
T KOG0575|consen 249 IRKLLRPNPSERPSLDEVLDHP 270 (592)
T ss_pred HHHHhcCCcccCCCHHHHhcCH
Confidence 9999999999999999999983
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-49 Score=364.39 Aligned_cols=245 Identities=22% Similarity=0.245 Sum_probs=208.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+..+++.||+|+||+||.++ .++++.+|+|++++.... +.+....|..+|.+++||.||+++..|++++.+|+|+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl 104 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL 104 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence 345788999999999999999 566999999999865432 3557889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||+.||.|..+|. +.+.+++..+..++.+|+.||.|||+++ ||||||||+|||||.+|+++|+||||++....
T Consensus 105 d~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~ 181 (357)
T KOG0598|consen 105 DYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA 181 (357)
T ss_pred eccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCCc
Confidence 9999999999997 5677999999999999999999999999 99999999999999999999999999985433
Q ss_pred CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 206 GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
..+++||+.|||||++.+..++..+|.||||+++|||++|.+||.......+........ ....+...+.+.+++
T Consensus 182 t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-----~~~~p~~ls~~ardl 256 (357)
T KOG0598|consen 182 TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-----LPLPPGYLSEEARDL 256 (357)
T ss_pred cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----CCCCCccCCHHHHHH
Confidence 346799999999999999999999999999999999999999998764333222221111 112233357889999
Q ss_pred HHHhccCCCCCCC----CHHHHHHH
Q 011349 286 ASRCLQYEPRERP----NAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rp----s~~~il~~ 306 (488)
+.++|..||++|. ++.+|-+|
T Consensus 257 l~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 257 LKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred HHHHhccCHHHhcCCCCChHHhhcC
Confidence 9999999999995 45555544
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.5e-49 Score=350.84 Aligned_cols=248 Identities=23% Similarity=0.312 Sum_probs=200.7
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|..++++|+|+||+||+++ .++|+.||||+|..+.. .-.+-..+|+++|++++|+|+|.++.+|......+||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 46778899999999999999 55699999999976542 1234578999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-C---C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-G---K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~---~ 207 (488)
|+. ++.+.|.+ ....++...+.+++.|++.|+.|+|+++ +|||||||+|||++.+|.+||||||+|+.... + +
T Consensus 83 ~dh-TvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT 159 (396)
T KOG0593|consen 83 CDH-TVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT 159 (396)
T ss_pred cch-HHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchhh
Confidence 985 55555654 3345899999999999999999999999 99999999999999999999999999998763 3 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh--------------------cccccccc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR--------------------GKNFLMLM 266 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~--------------------~~~~~~~~ 266 (488)
.+..|..|.|||.+.| .+|....||||+||++.||++|.+.||+...-... ...+..+.
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~ 239 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR 239 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence 4577999999999988 78999999999999999999999988876321100 00000000
Q ss_pred ccc------cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DSC------LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~~------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
-+. +...+| ..+.-+.+++..||+.||.+|++.++++.|
T Consensus 240 lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 240 LPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred cCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 000 011111 234568999999999999999999999987
No 11
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-48 Score=364.63 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=205.5
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC--eeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE--ERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 132 (488)
+...+.||+|+||.||++.. ++|...|||.+........+.+.+|+.+|++++|||||+++|...... .+++.|||+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~ 98 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA 98 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence 45567789999999999994 458999999987664333677999999999999999999999855544 689999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCcccCCC------
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRD------ 205 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~------ 205 (488)
++|+|.+++.+..+ .|++..+..+..||++||.|||++| +|||||||+|||++. ++.+||+|||+++....
T Consensus 99 ~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~ 176 (313)
T KOG0198|consen 99 PGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD 176 (313)
T ss_pred CCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence 99999999986444 7999999999999999999999999 999999999999999 79999999999886652
Q ss_pred -CCccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 -GKSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 -~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.....||+.|||||++..+ ...+++|||||||++.||+||++||... . ........+......+.+|...+.+..
T Consensus 177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~--~~~~~~~~ig~~~~~P~ip~~ls~~a~ 253 (313)
T KOG0198|consen 177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-F--EEAEALLLIGREDSLPEIPDSLSDEAK 253 (313)
T ss_pred ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-c--chHHHHHHHhccCCCCCCCcccCHHHH
Confidence 2256899999999999853 3446999999999999999998877652 0 000111111111122356677889999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
+++.+|+..+|++|||+.++|.|.-...
T Consensus 254 ~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 254 DFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred HHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 9999999999999999999999965433
No 12
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-48 Score=368.05 Aligned_cols=249 Identities=19% Similarity=0.270 Sum_probs=207.9
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHH--HHHHHHHHhhcC-CCCCcccccceecCC-eeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQ--FLEEARAVGLLR-SERLVNLIGCCCEGE-ERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l~-h~niv~~~~~~~~~~-~~~lv 128 (488)
..|.++++||.|+||.||+|+ ..+|..||||+++..- ...++ -+||++.|++|+ |||||++.+++.+.+ .+|+|
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf-~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKF-YSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhh-ccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 356889999999999999999 7789999999998654 22343 478999999998 999999999999888 89999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
||||+ .+|+++++++ ++.|++..+..|+.||+.||+|+|.+| +.|||+||+|||+.....+||+|||+||.+...
T Consensus 89 fE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP 165 (538)
T KOG0661|consen 89 FEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPP 165 (538)
T ss_pred HHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCC
Confidence 99997 8999999875 788999999999999999999999999 999999999999999999999999999987654
Q ss_pred -CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhh--hhhc---------------cc------
Q 011349 207 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD--LIRG---------------KN------ 261 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~--~~~~---------------~~------ 261 (488)
+.++.|..|+|||++.. +-|+.+.||||+|||++|+.+-++.|++...- .++- ..
T Consensus 166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn 245 (538)
T KOG0661|consen 166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMN 245 (538)
T ss_pred cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhc
Confidence 45678999999998854 77999999999999999999999999875221 1100 00
Q ss_pred --cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 262 --FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 262 --~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+.......+..-++ ..+.++.+||.+|+..||.+|||+.+++++-
T Consensus 246 f~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 246 FRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred cCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 00111111111122 2678899999999999999999999999984
No 13
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.5e-47 Score=333.23 Aligned_cols=248 Identities=22% Similarity=0.277 Sum_probs=206.3
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|..++++|+|+||+||+|+ .++|+.||||+++.....+ .....+|++.|+.++|+||+.++++|.+.+.+.||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 45677889999999999999 7789999999998765332 35789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
++ .+|+..|++ +...++..++..++.++++||+|||++. |+||||||.|+|++++|.+||+|||+++......
T Consensus 83 m~-tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 83 MP-TDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred cc-ccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 98 899998876 6678999999999999999999999999 9999999999999999999999999999876543
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----------cc------------cc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----------KN------------FL 263 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-----------~~------------~~ 263 (488)
....|..|.|||.+.| ..|+...||||.|||+.||+.|.+.+++...-.... .. +.
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 2356899999999987 679999999999999999999998777653211100 00 01
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+.... .-+.++.++.+|+..||..||.+|+++.+++++
T Consensus 240 ~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 240 QFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 011111111 222345677999999999999999999999987
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.4e-47 Score=358.77 Aligned_cols=249 Identities=22% Similarity=0.279 Sum_probs=203.0
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 129 (488)
.+..+++||+|+||.||+|+ ..+|+.||+|++..+. ........+||.+|++|+||||+++.+...+. ..+|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 45778899999999999999 7789999999998766 33355678999999999999999999998876 6899999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
|||+ -+|..++.. ....|++.++..++.||+.||.|+|++| |+|||||.+|||||.+|.+||+|||||+.+....
T Consensus 198 eYMd-hDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~ 274 (560)
T KOG0600|consen 198 EYMD-HDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA 274 (560)
T ss_pred eccc-chhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence 9998 689888853 3457999999999999999999999999 9999999999999999999999999999765433
Q ss_pred ---ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------c---cc-cc--cccc-cc
Q 011349 208 ---SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------G---KN-FL--MLMD-SC 269 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------~---~~-~~--~~~~-~~ 269 (488)
..+.|..|.|||.+.| ..|+.+.|+||.||||.||++|++++++...-... + .. +. .+.. ..
T Consensus 275 ~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~ 354 (560)
T KOG0600|consen 275 PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATI 354 (560)
T ss_pred ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccc
Confidence 3456899999999988 56999999999999999999999888765221100 0 00 00 0000 00
Q ss_pred cCCC--C-------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 270 LEGH--F-------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 270 ~~~~--~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+. + -...+....+|+..+|..||.+|.|+.++|.+
T Consensus 355 ~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 355 FKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 0000 0 11245778999999999999999999999986
No 15
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-46 Score=358.18 Aligned_cols=235 Identities=20% Similarity=0.314 Sum_probs=207.7
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
++=||.|+.|-||+|++++ +.||||+++.-. ..+|+-|++|+||||+.+.|+|.....+|||||||..|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl~n-etVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHN-ETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeeccC-ceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 3457999999999999855 459999986432 46788999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---CCccccccCC
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---GKSYSTNLAF 215 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---~~~~~~t~~y 215 (488)
..|+ .+++++......|..+|+.|+.|||.+. |||||||.-||||+.+..|||+|||-++...+ ..++.||..|
T Consensus 201 ~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW 277 (904)
T KOG4721|consen 201 EVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW 277 (904)
T ss_pred HHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence 9998 6788999999999999999999999998 99999999999999999999999999886544 3578999999
Q ss_pred CCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCC
Q 011349 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295 (488)
Q Consensus 216 ~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 295 (488)
||||+++..+.+.|+||||||||||||+||..|+... .....+..+-...+....|..+|+.+.-|+++||...|.
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV----dssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpR 353 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV----DSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPR 353 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc----chheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999886543 122333444555667778889999999999999999999
Q ss_pred CCCCHHHHHHHhc
Q 011349 296 ERPNAKSLVASLT 308 (488)
Q Consensus 296 ~Rps~~~il~~l~ 308 (488)
.||++++|+.||+
T Consensus 354 NRPSFrqil~Hld 366 (904)
T KOG4721|consen 354 NRPSFRQILLHLD 366 (904)
T ss_pred CCccHHHHHHHHh
Confidence 9999999999986
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=351.11 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=210.2
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCCh-HHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDS-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+-..|.+..+||.|..++||+|+ ...+..||||+++.+...+. +.+.+|+..|+.++||||++++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 44567888999999999999999 67789999999998776554 78999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
.||.+||+.++++..-...+++..+..|++++++||.|||.+| .||||||+.||||+++|.|||+|||.+..+...
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 9999999999998765566999999999999999999999999 999999999999999999999999976543322
Q ss_pred -----CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc----ccCCCCC
Q 011349 207 -----KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS----CLEGHFS 275 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 275 (488)
.++.||+.|||||+++. ..|+.|+||||||++.+||.+|..||.....-.+.-..+...... .......
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~ 262 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDED 262 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHh
Confidence 45688999999999654 569999999999999999999999876542211111111111110 1111111
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+..+.+++..||++||.+|||+++++++
T Consensus 263 k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 263 KKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred hhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 2245689999999999999999999999987
No 17
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=362.31 Aligned_cols=246 Identities=19% Similarity=0.287 Sum_probs=211.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..|....+||+|+.|.||.|. ..+++.||||.+........+-+.+|+.+|+..+|+|||++++.|...+.+++|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 455666789999999999999 6678899999999887666778999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
+||+|.+.+. ...+++.++..|+++++.||+|||.++ |+|||||.+|||++.+|.+||+|||++..+... .+
T Consensus 353 ~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T 428 (550)
T KOG0578|consen 353 EGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST 428 (550)
T ss_pred CCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence 9999999994 556999999999999999999999999 999999999999999999999999998876543 46
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..|||.|||||+.....|+++.||||||++++||+-|.+|+.... +......+.. .....-..+...++.+.+++.+
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~-PlrAlyLIa~--ng~P~lk~~~klS~~~kdFL~~ 505 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN-PLRALYLIAT--NGTPKLKNPEKLSPELKDFLDR 505 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC-hHHHHHHHhh--cCCCCcCCccccCHHHHHHHHH
Confidence 789999999999999999999999999999999999998876431 1110000000 1111223345567899999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..||++|+++.++|+|
T Consensus 506 cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 506 CLVVDVEQRASAKELLEH 523 (550)
T ss_pred HhhcchhcCCCHHHHhcC
Confidence 999999999999999998
No 18
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=359.18 Aligned_cols=245 Identities=21% Similarity=0.259 Sum_probs=209.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 128 (488)
.++.+.+.||.|+|++|++|+ .++++.||||++.+.-. ...+-+.+|-.+|.+| .||.|++|+..|.+...+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 344677888999999999999 67899999999865431 1234578899999999 799999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
+||+++|+|.++|. +-+.|++.....++.+|+.||.|||++| ||||||||+|||||.|++++|+|||.|+.+..
T Consensus 153 Le~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~ 229 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQK 229 (604)
T ss_pred EEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhc
Confidence 99999999999998 4577999999999999999999999999 99999999999999999999999999986532
Q ss_pred ------------C--CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC
Q 011349 206 ------------G--KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 206 ------------~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
. .+++||..|.+||++..+..++.+|+|+|||+||+|+.|.+||.+...-.. +..++. +.
T Consensus 230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli----FqkI~~--l~ 303 (604)
T KOG0592|consen 230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI----FQKIQA--LD 303 (604)
T ss_pred cccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH----HHHHHH--hc
Confidence 1 357899999999999999999999999999999999999999876522221 122221 12
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
-.++...++.+.+|+.+.|..||.+|+|.++|.+|.
T Consensus 304 y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 304 YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 346667778999999999999999999999999984
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.7e-46 Score=359.13 Aligned_cols=242 Identities=19% Similarity=0.251 Sum_probs=209.7
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+.+.||+|+||.||||+ ..+.+.||+|.+.+....+ .+.+.+|+++++.++|||||.++++|....++++|+||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 45667778999999999999 5678999999997665333 45799999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+.| +|..+|. ..+.++++++..|+.+++.||.|||+.+ |+|||+||.|||++..|++|+||||+|+......
T Consensus 83 a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt 158 (808)
T KOG0597|consen 83 AVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT 158 (808)
T ss_pred hhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence 985 9999997 6778999999999999999999999999 9999999999999999999999999999877654
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
+..|||.|||||...+++|+..+|+||+||++|||++|++||........-..... ++ ..+|...+..+..++.
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~---d~---v~~p~~~S~~f~nfl~ 232 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK---DP---VKPPSTASSSFVNFLQ 232 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---CC---CCCcccccHHHHHHHH
Confidence 45789999999999999999999999999999999999999876533222111111 11 1234466788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
..|.+||..|.|..+++.|
T Consensus 233 gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 233 GLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHhhcChhhcccHHHHhcC
Confidence 9999999999999999987
No 20
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.3e-46 Score=334.58 Aligned_cols=257 Identities=19% Similarity=0.198 Sum_probs=208.3
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceec--C
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCE--G 122 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~--~ 122 (488)
...++.+++.++.+|++|+||+||+|+ ..+++.||+|+++.+.... .-.-.+||.+|.+++|||||.+-.+... -
T Consensus 70 ~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~ 149 (419)
T KOG0663|consen 70 GGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM 149 (419)
T ss_pred cCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence 345556677889999999999999999 5679999999999765221 2356899999999999999999887654 4
Q ss_pred CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
+.+|+|||||+ -+|..++... .++|...++..++.|+++|+.|||.+. |+||||||+|+|++..|.+||+|||+|+.
T Consensus 150 d~iy~VMe~~E-hDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 150 DKIYIVMEYVE-HDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred ceeeeeHHHHH-hhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhhh
Confidence 57999999998 7999999763 468999999999999999999999999 99999999999999999999999999998
Q ss_pred CCCC----CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc------------------
Q 011349 203 SRDG----KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG------------------ 259 (488)
Q Consensus 203 ~~~~----~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~------------------ 259 (488)
+... +....|..|.|||.+.| ..|+.+.|+||+|||+.||+++++.|++...-....
T Consensus 227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 7765 34567999999999988 568999999999999999999999888753211100
Q ss_pred -------cccccccccccCCCCChh-hHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 260 -------KNFLMLMDSCLEGHFSND-DGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 260 -------~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
..+.......++..+... .+..-.+|+..+|..||.+|.|+.+.|+|=
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 001111111122233322 457788999999999999999999999983
No 21
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-46 Score=351.38 Aligned_cols=243 Identities=17% Similarity=0.275 Sum_probs=210.4
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
|+.+..||+|+||.||+|. ..+++.||+|++......+ .+++++|+.+|.+++++||.++|+.+..+..++++||||.
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~ 94 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCG 94 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhc
Confidence 4555778999999999999 5679999999998766444 5789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
||++.+.+. .+..+++..+.-++++++.||.|||.++ .+|||||+.|||+..+|.+||+|||++...... .++
T Consensus 95 gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tf 171 (467)
T KOG0201|consen 95 GGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTF 171 (467)
T ss_pred Ccchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccccc
Confidence 999999996 4455589999999999999999999999 999999999999999999999999998765432 578
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.||+.|||||++.+..|+.++||||||++.+||++|.+|+... ......-++.....+.....+++.+.+++..|
T Consensus 172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~-----hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~C 246 (467)
T KOG0201|consen 172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL-----HPMRVLFLIPKSAPPRLDGDFSPPFKEFVEAC 246 (467)
T ss_pred cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCccc-----CcceEEEeccCCCCCccccccCHHHHHHHHHH
Confidence 9999999999999889999999999999999999999876442 11233333444444444456778899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|.+||+.||++.++++|
T Consensus 247 L~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 247 LDKNPEFRPSAKELLKH 263 (467)
T ss_pred hhcCcccCcCHHHHhhh
Confidence 99999999999999987
No 22
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-46 Score=332.83 Aligned_cols=234 Identities=18% Similarity=0.216 Sum_probs=204.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
++++++.||.|+||.|.+++ ..+|..+|+|+++....-. .+...+|..+|+.+.||+++++++.|.+.+.+|+|||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme 124 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME 124 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence 44678899999999999999 5568999999998665333 3457789999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-cc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-SY 209 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-~~ 209 (488)
|++||.|..+++ +.++++++.+..++.||+.||.|||+.+ |++|||||+|||+|.+|.+||+|||.|+...... +.
T Consensus 125 yv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~Tl 201 (355)
T KOG0616|consen 125 YVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTL 201 (355)
T ss_pred ccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEEEe
Confidence 999999999997 5678999999999999999999999999 9999999999999999999999999999876653 67
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+|||.|+|||.++...++.++|.|||||++|||+.|.+||..+....+- ..++... -.+|...+.++.+|+..+
T Consensus 202 CGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY----~KI~~~~--v~fP~~fs~~~kdLl~~L 275 (355)
T KOG0616|consen 202 CGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIY----EKILEGK--VKFPSYFSSDAKDLLKKL 275 (355)
T ss_pred cCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHH----HHHHhCc--ccCCcccCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999876442211 1122211 246667788999999999
Q ss_pred ccCCCCCC
Q 011349 290 LQYEPRER 297 (488)
Q Consensus 290 l~~dp~~R 297 (488)
|+.|-.+|
T Consensus 276 L~vD~t~R 283 (355)
T KOG0616|consen 276 LQVDLTKR 283 (355)
T ss_pred HhhhhHhh
Confidence 99999999
No 23
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=358.45 Aligned_cols=245 Identities=21% Similarity=0.237 Sum_probs=208.2
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC----C-CChHHHHHHHHHHhhcC-CCCCcccccceecCCee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA----W-PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEER 125 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 125 (488)
...|.+.+.||+|+||.|++|. ..+++.||||++.... . ...+.+.+|+.+++.++ ||||++++.++.....+
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 4567888999999999999998 5578999999877642 1 23456778999999998 99999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSR 204 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 204 (488)
++||||+.||+|.+++.. .+++.+..+..++.|++.|++|||++| |+||||||+|||++.+ +++||+|||++....
T Consensus 96 ~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 999999999999999974 678999999999999999999999999 9999999999999999 999999999998772
Q ss_pred -C---CCccccccCCCCccccccCC-cc-cCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 205 -D---GKSYSTNLAFTPPEYLRTGR-VI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 205 -~---~~~~~~t~~y~aPE~~~~~~-~~-~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
. ..+.+||+.|+|||++.+.. |+ .++||||+||+||-|++|..||........... +... .-.+|...
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k----i~~~--~~~~p~~~ 246 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK----IRKG--EFKIPSYL 246 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH----HhcC--CccCCCCc
Confidence 2 34779999999999999877 75 799999999999999999999986433322221 1111 11234444
Q ss_pred -HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 279 -GTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 279 -~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
++++..|+.+||..||.+|+|+.+|+.+
T Consensus 247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 7889999999999999999999999955
No 24
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-46 Score=370.13 Aligned_cols=324 Identities=19% Similarity=0.257 Sum_probs=265.0
Q ss_pred ccCHHHHHHHhcCCCc------ccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcC
Q 011349 40 EFNLDQLRAATSGFCA------DNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLR 108 (488)
Q Consensus 40 ~~~~~~~~~~~~~~~~------~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~ 108 (488)
.+++++--.|...|.. -.|-+.||.|.||.|++|.++- ...||||.++...... ..+|+.|+.||.+++
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 4667664444444432 2344678999999999999543 4569999999765443 458999999999999
Q ss_pred CCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 109 SERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 109 h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
||||++|.|+.......+||+|||++|+|+.+|+.+. +.|++.+...++++|+.|+.||-+.+ +|||||-..|||++.
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNs 766 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNS 766 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeecc
Confidence 9999999999999999999999999999999998754 55999999999999999999999999 999999999999999
Q ss_pred CCCCeeccCCCcccCCCCCcc----c-c--ccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcc
Q 011349 189 DGNPRLSCFGLMKNSRDGKSY----S-T--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGK 260 (488)
Q Consensus 189 ~~~~kl~Dfgla~~~~~~~~~----~-~--t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~ 260 (488)
+...|++||||++...+.... . | ..+|.|||.+...++|.+||||||||++||.++ |..|++. +.++
T Consensus 767 nLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd-----mSNQ 841 (996)
T KOG0196|consen 767 NLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-----MSNQ 841 (996)
T ss_pred ceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc-----cchH
Confidence 999999999999977654311 1 1 368999999999999999999999999999776 6677665 3445
Q ss_pred ccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCCCCccCCCC-----CCCCCCCccc
Q 011349 261 NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIP-----HGTASTKQTI 335 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 335 (488)
+....+....+.+.|.++|..|.+|+..||++|-.+||.+.+|+..|.++..............+ -...+.+...
T Consensus 842 dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld~~~~~~~ 921 (996)
T KOG0196|consen 842 DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLDRSGSDFT 921 (996)
T ss_pred HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccCCCCCCCc
Confidence 55556666777788899999999999999999999999999999999998876543332221111 1122344456
Q ss_pred ccCcchhhhhchhhhHHHHHHHhhcccCchhhhhh
Q 011349 336 TLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANE 370 (488)
Q Consensus 336 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 370 (488)
+..++++|...|++....+.|...||.+.+.+.+.
T Consensus 922 ~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~V~q~ 956 (996)
T KOG0196|consen 922 PFRSVGDWLEAIKMGRYKEHFAAAGYTSFEDVAQM 956 (996)
T ss_pred ccCCHHHHHHHhhhhHHHHHHHhcCcccHHHHHhh
Confidence 67788999999999999999999999999866543
No 25
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.6e-45 Score=357.98 Aligned_cols=254 Identities=22% Similarity=0.328 Sum_probs=202.1
Q ss_pred cccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecC-Cee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEG-EER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~~~ 125 (488)
.+++.+.||+|+||.||+|.+ .+++.||||+++..... ....+.+|+.++..+ +||||+++++++... ...
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL 87 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence 357788899999999999973 23567999999754322 245789999999999 899999999988764 458
Q ss_pred eEEEecCCCCChhhhhccCC------------------------------------------------------------
Q 011349 126 LLVAEFMPNETLSKHLFHWE------------------------------------------------------------ 145 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 145 (488)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T cd05102 88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW 167 (338)
T ss_pred EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence 99999999999999886421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------ccccccCCCCcc
Q 011349 146 NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPE 219 (488)
Q Consensus 146 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE 219 (488)
..++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...+++.|+|||
T Consensus 168 ~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 246 (338)
T cd05102 168 KSPLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE 246 (338)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence 134888999999999999999999999 9999999999999999999999999998653221 233467899999
Q ss_pred ccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC
Q 011349 220 YLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298 (488)
Q Consensus 220 ~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 298 (488)
++.+..++.++|||||||++|||++ |..||........ +...+........+...++.+.+|+.+||+.||.+||
T Consensus 247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP 322 (338)
T cd05102 247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE----FCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERP 322 (338)
T ss_pred HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH----HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence 9998889999999999999999997 8888765321110 0011111111123345567899999999999999999
Q ss_pred CHHHHHHHhchhhcc
Q 011349 299 NAKSLVASLTPLQKE 313 (488)
Q Consensus 299 s~~~il~~l~~~~~~ 313 (488)
|+.++++.|+.+..+
T Consensus 323 s~~el~~~l~~~~~~ 337 (338)
T cd05102 323 TFSALVEILGDLLQE 337 (338)
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999987653
No 26
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-45 Score=356.13 Aligned_cols=245 Identities=18% Similarity=0.255 Sum_probs=214.6
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC-C--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA-W--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
....+.+.+.||.|+.|.|-+|+ ..+|+.+|||++.... . .....+.+|+-+|+-+.||||+++|+++.+..++|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 35677888999999999999999 6789999999997652 1 124568999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
|.||++||.|.+++. ..+++++.++.++++||+.|+.|+|..+ |+||||||+|+|||..+++||+|||+|.....+
T Consensus 90 vlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 999999999999998 6788999999999999999999999999 999999999999999999999999999876655
Q ss_pred --CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC--CCChhhHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGTE 281 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 281 (488)
.+.+|++.|.+||+++|.+| +.++||||.|||||.|+||+.||.++.... ++....++ ..|..++.+
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~--------LLlKV~~G~f~MPs~Is~e 238 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV--------LLLKVQRGVFEMPSNISSE 238 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH--------HHHHHHcCcccCCCcCCHH
Confidence 37899999999999999988 569999999999999999999987653322 22222222 245667899
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.++|+.+|+..||++|.|+++|++|-
T Consensus 239 aQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 239 AQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHHHHHHHhccCccccccHHHHhhCc
Confidence 99999999999999999999999994
No 27
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-44 Score=344.94 Aligned_cols=261 Identities=15% Similarity=0.234 Sum_probs=211.1
Q ss_pred CCCccccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCC
Q 011349 35 LPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSER 111 (488)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~n 111 (488)
+...+.++.+++...+ ...+|+|++|.||+|.+ +|+.||||.++...... .+.+.+|+.+|++++|||
T Consensus 9 ~~~~~~i~~~~i~~~~--------~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 79 (283)
T PHA02988 9 INDIKCIESDDIDKYT--------SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNN 79 (283)
T ss_pred cCcceecCHHHcCCCC--------CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCC
Confidence 4455666777763221 12469999999999998 78889999998654333 356789999999999999
Q ss_pred Ccccccceec----CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceee
Q 011349 112 LVNLIGCCCE----GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILF 186 (488)
Q Consensus 112 iv~~~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill 186 (488)
|+++++++.+ ....++||||++||+|.+++. ....+++...+.++.+++.||.|||+. + ++||||||+|||+
T Consensus 80 Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill 156 (283)
T PHA02988 80 ILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLV 156 (283)
T ss_pred EEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEE
Confidence 9999999876 346899999999999999997 345799999999999999999999985 6 8999999999999
Q ss_pred cCCCCCeeccCCCcccCCCC-CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc
Q 011349 187 DQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL 263 (488)
Q Consensus 187 ~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 263 (488)
++++.+||+|||+++..... ....+++.|+|||.+.+ ..++.++|||||||++|||+||+.||......... .
T Consensus 157 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~----~ 232 (283)
T PHA02988 157 TENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY----D 232 (283)
T ss_pred CCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH----H
Confidence 99999999999998865433 24467899999999976 67899999999999999999999988654222111 1
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
.+.........+..++..+.+++.+||+.||++|||+.+++..|+.+.
T Consensus 233 ~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 233 LIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 111111222344456789999999999999999999999999998765
No 28
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.6e-46 Score=373.13 Aligned_cols=253 Identities=25% Similarity=0.364 Sum_probs=213.6
Q ss_pred cccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.++++||+|+||.||+|... ....||||.++..... ...+|++|+++|..++|||||+++|+|..++..++|+
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvF 568 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVF 568 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEE
Confidence 46788999999999999842 2457999999987755 4678999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC--------CC----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 130 EFMPNETLSKHLFHW--------EN----QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 130 e~~~~gsL~~~l~~~--------~~----~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
|||..|+|.++|... .+ .+|+..+.+.|+.|||.|+.||-++. +|||||-.+|+||+++..|||+||
T Consensus 569 EYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIsDf 647 (774)
T KOG1026|consen 569 EYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKISDF 647 (774)
T ss_pred EecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEeccc
Confidence 999999999999742 12 23899999999999999999999998 999999999999999999999999
Q ss_pred CCcccCCCCCcc------ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccccccc
Q 011349 198 GLMKNSRDGKSY------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 198 gla~~~~~~~~~------~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
||++.....+-+ .-.++|||||.+..++||.+||||||||+|||+++ |+.|+.+.. .+...+.+....
T Consensus 648 GLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS-----n~EVIe~i~~g~ 722 (774)
T KOG1026|consen 648 GLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS-----NQEVIECIRAGQ 722 (774)
T ss_pred ccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc-----hHHHHHHHHcCC
Confidence 999977655432 22579999999999999999999999999999998 555655432 222222222222
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
--..|..+|.++.+|+..||+.+|.+||++.+|-..|+.+.....
T Consensus 723 lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 723 LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 245677899999999999999999999999999999988776543
No 29
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-45 Score=353.52 Aligned_cols=249 Identities=22% Similarity=0.342 Sum_probs=205.9
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
..+...||+|+||+||+|.| .|. ||||+++...... .+.|.+|+.++++-+|.||+-+.|+|..++. .||+.+|+
T Consensus 394 v~l~~rIGsGsFGtV~Rg~w-hGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCe 470 (678)
T KOG0193|consen 394 VLLGERIGSGSFGTVYRGRW-HGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCE 470 (678)
T ss_pred hhccceeccccccceeeccc-ccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhcc
Confidence 35667899999999999997 444 9999999876554 4579999999999999999999999987776 99999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC------CC
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------GK 207 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~~ 207 (488)
|.+|+.+|+- ....|...+.+.|+.||+.|+.|||.++ |||||||..||++.+++.|||+||||+..... ..
T Consensus 471 GsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~ 548 (678)
T KOG0193|consen 471 GSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLE 548 (678)
T ss_pred Cchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeeccccccC
Confidence 9999999965 3456999999999999999999999999 99999999999999999999999999864321 12
Q ss_pred ccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC---CCChhhHHH
Q 011349 208 SYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG---HFSNDDGTE 281 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 281 (488)
...|...|||||+++. .+|++.|||||||||+|||+||..|+.....+ ..+..+-...+.. .....++++
T Consensus 549 qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d----qIifmVGrG~l~pd~s~~~s~~pk~ 624 (678)
T KOG0193|consen 549 QPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD----QIIFMVGRGYLMPDLSKIRSNCPKA 624 (678)
T ss_pred CCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh----heEEEecccccCccchhhhccCHHH
Confidence 3456789999999975 56899999999999999999999887643222 1122221111111 123457889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+|+..||..++++||.+.+|+..|+.+.+.
T Consensus 625 mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 625 MKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred HHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 99999999999999999999999988887764
No 30
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=9e-45 Score=347.20 Aligned_cols=249 Identities=19% Similarity=0.158 Sum_probs=205.7
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+.+++.+++.||+|+||.||+|+ ..+|..+|+|+++++... ..+.+..|-.+|....+|+||+++-.|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 44566889999999999999999 567999999999876533 34567889999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++||++..+|. ..+.|++..+..++.+++.||..+|+.| +|||||||+|+|||..|++||+||||+.....
T Consensus 219 iMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 999999999999997 5678999999999999999999999999 99999999999999999999999999742110
Q ss_pred -----------------------C--------------------------CccccccCCCCccccccCCcccCCceEeeh
Q 011349 206 -----------------------G--------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFG 236 (488)
Q Consensus 206 -----------------------~--------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG 236 (488)
. .+.+|||.|||||++.+..|+..+|.||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0 023679999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC---CHHHHHHH
Q 011349 237 TLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP---NAKSLVAS 306 (488)
Q Consensus 237 ~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~ 306 (488)
||+||||.|-+||........-... ..+...+.-+.....+++..+||.+|+. ||++|. .++||-+|
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI--~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKI--VNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHH--HHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 9999999999999776443221110 0111112222222345889999999998 999995 57787776
No 31
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.1e-43 Score=373.15 Aligned_cols=255 Identities=18% Similarity=0.215 Sum_probs=202.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.++++||+|+||.||+|.. .+|+.||||++....... .+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4568889999999999999994 468999999997543222 356899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 130 EFMPNETLSKHLFHW---------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 130 e~~~~gsL~~~l~~~---------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
||++||+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCcc
Confidence 999999999988531 1234667788999999999999999999 999999999999999999999999999
Q ss_pred ccCCC----------------------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh
Q 011349 201 KNSRD----------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR 258 (488)
Q Consensus 201 ~~~~~----------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~ 258 (488)
+.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 76511 01235899999999999999999999999999999999999988653221111
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC-CHHHHHHHhchhhc
Q 011349 259 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP-NAKSLVASLTPLQK 312 (488)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~il~~l~~~~~ 312 (488)
.. .....+. ........++.+.+++.+||..||++|| +++++++.|+....
T Consensus 241 ~~--~~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 241 YR--DVILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hh--hhccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 10 0011110 0011124567899999999999999994 67777777766543
No 32
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-44 Score=339.68 Aligned_cols=252 Identities=17% Similarity=0.184 Sum_probs=206.9
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC--------------CChHHHHHHHHHHhhcCCCCCccccc
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW--------------PDSRQFLEEARAVGLLRSERLVNLIG 117 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~~~~ 117 (488)
.+.|.++++||+|.||.|-+|. ..+++.||||++.+... ...+...+|+.+|++++|||||+++.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 4567899999999999999999 55689999999964321 12357899999999999999999999
Q ss_pred ceecC--CeeeEEEecCCCCChhhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCee
Q 011349 118 CCCEG--EERLLVAEFMPNETLSKHLFHWENQP-MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194 (488)
Q Consensus 118 ~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 194 (488)
+..+. +.+|||+|||..|.+...- ...+ +++.++++++++++.||.|||.+| ||||||||+|+||+++|++||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEe
Confidence 98764 5799999999999886543 3445 999999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC---------CccccccCCCCccccccCC----cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc
Q 011349 195 SCFGLMKNSRDG---------KSYSTNLAFTPPEYLRTGR----VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261 (488)
Q Consensus 195 ~Dfgla~~~~~~---------~~~~~t~~y~aPE~~~~~~----~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~ 261 (488)
+|||.+.....+ ....|||.|+|||.+.++. .+.+.||||+||+||.|+.|+.||.+... ...
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~----~~l 327 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE----LEL 327 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH----HHH
Confidence 999998754222 1357899999999998733 35689999999999999999999977632 223
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 262 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
+..++...+.-+..++....+.+||.++|.+||+.|.+..+|..|......
T Consensus 328 ~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 328 FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 334444443333333567889999999999999999999999999765544
No 33
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-44 Score=347.29 Aligned_cols=247 Identities=18% Similarity=0.179 Sum_probs=216.9
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCe-eeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEE-RLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~lv~ 129 (488)
+.|..++.+|+|+||.++.++ ..+++.|++|.+....... .+...+|+.++++++|||||.+.+.|..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 456788899999999999999 4467889999998765433 3468999999999999999999999999888 99999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
+||+||+|.+.|.+.++..++++.+..|+.|++.|+.|||++. |+|||||++||+++.++.|||+|||+|+...+..
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 9999999999998877788999999999999999999999888 9999999999999999999999999999887653
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
+..||+.||+||.+.+.+|+.|+|||||||++|||++-+++|................ -.+.+...+.++..+
T Consensus 163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-----~~Plp~~ys~el~~l 237 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-----YSPLPSMYSSELRSL 237 (426)
T ss_pred hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-----CCCCCccccHHHHHH
Confidence 5689999999999999999999999999999999999999887654444333333322 234566678899999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+..||..+|+.||++.++|.+
T Consensus 238 v~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 238 VKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999987
No 34
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.2e-44 Score=349.35 Aligned_cols=246 Identities=17% Similarity=0.183 Sum_probs=205.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++.+.+++.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 45678889999999999999995 468899999987542 12345688999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-C
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-K 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 207 (488)
|||++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 97 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 97 LEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred EcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence 99999999999987 4457899999999999999999999999 999999999999999999999999999876443 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||+||..||.......... .+... ...++...+..+.+|+.
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYE----KILAG--RLKFPNWFDGRARDLVK 247 (329)
T ss_pred eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHH----HHhcC--CcCCCCCCCHHHHHHHH
Confidence 4578999999999999889999999999999999999999886542211111 11111 11233445678999999
Q ss_pred HhccCCCCCCCC-----HHHHHHHh
Q 011349 288 RCLQYEPRERPN-----AKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps-----~~~il~~l 307 (488)
+||+.||.+||+ +.+++.|-
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 999999999986 78888873
No 35
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=353.10 Aligned_cols=255 Identities=23% Similarity=0.348 Sum_probs=212.5
Q ss_pred cccccCCCCCCceEEEEEeCC--C---cEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE--D---RWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~--~---~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.++||+|+||.||+|.+.. + ..||||..+... .....+|.+|+++|++++|||||+++|++.....++||
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 345789999999999999533 2 238999988533 22356899999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
||+|.||+|.++|.+. ...++..+++.++.+.+.||+|||+++ +|||||-.+|+|++.++.+||+|||+++......
T Consensus 240 mEl~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~ 317 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM 317 (474)
T ss_pred EEecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceee
Confidence 9999999999999853 236999999999999999999999999 9999999999999999999999999987654211
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...-...|+|||.+..+.+++++|||||||++||+++ |..|+++........ .+.....+...+...|.++.
T Consensus 318 ~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~----kI~~~~~r~~~~~~~p~~~~ 393 (474)
T KOG0194|consen 318 KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKA----KIVKNGYRMPIPSKTPKELA 393 (474)
T ss_pred ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHH----HHHhcCccCCCCCCCHHHHH
Confidence 1123578999999999999999999999999999999 777777654332222 12133344455667789999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
.++.+||..+|++||||.++.+.|+.+......+
T Consensus 394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred HHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999998876554
No 36
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.8e-44 Score=350.43 Aligned_cols=237 Identities=19% Similarity=0.224 Sum_probs=199.5
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.||+|+||.||+|.. .+|+.||||+++.... .....+.+|+.++++++||||+++++++..++..++||||++||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 579999999999994 5789999999975421 223467889999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCccccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYSTN 212 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t 212 (488)
|.+++. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 82 LFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 999886 4567999999999999999999999999 99999999999999999999999999875422 2245689
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 292 (488)
+.|+|||++.+..++.++|||||||++|||+||+.||............. .. ...++...++++.+++.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~----~~--~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----ME--EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH----cC--CCCCCCCCCHHHHHHHHHHccC
Confidence 99999999999899999999999999999999999886543222111111 00 1233445678899999999999
Q ss_pred CCCCCC-----CHHHHHHH
Q 011349 293 EPRERP-----NAKSLVAS 306 (488)
Q Consensus 293 dp~~Rp-----s~~~il~~ 306 (488)
||++|| ++.++++|
T Consensus 233 dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CHHHcCCCCCCCHHHHHcC
Confidence 999999 89999887
No 37
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-44 Score=333.31 Aligned_cols=243 Identities=18% Similarity=0.263 Sum_probs=212.5
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChH---HHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSR---QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+.+.||+|+||.|-+|. +..|+.||||.++.+...+.+ .+.+|+++|+.|+||||+.++.+|...+.+.||||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 45778889999999999999 678999999999988766654 57899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|..+|.|++++. ..+.|++.++..+++||..|+.|+|.++ ++|||||.+|||+|+++++||+||||+-.+.+..
T Consensus 134 YaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLq 210 (668)
T KOG0611|consen 134 YASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQ 210 (668)
T ss_pred ecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHHH
Confidence 999999999998 5677999999999999999999999999 9999999999999999999999999998876654
Q ss_pred ccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC-ChhhHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF-SNDDGTELVRL 285 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l 285 (488)
+++|++.|.+||.+.|.+| .+..|-|||||+||-|+.|..||.+.... .++.++.++.+ .+..|....-|
T Consensus 211 TFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk--------~lvrQIs~GaYrEP~~PSdA~gL 282 (668)
T KOG0611|consen 211 TFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK--------RLVRQISRGAYREPETPSDASGL 282 (668)
T ss_pred HhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH--------HHHHHhhcccccCCCCCchHHHH
Confidence 7899999999999999887 57899999999999999999998765322 22222222222 12335678899
Q ss_pred HHHhccCCCCCCCCHHHHHHHhc
Q 011349 286 ASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l~ 308 (488)
|.+||..+|++|.|+.+|..|-.
T Consensus 283 IRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred HHHHHhcCcccchhHHHHhhhhe
Confidence 99999999999999999999854
No 38
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-45 Score=335.42 Aligned_cols=242 Identities=24% Similarity=0.292 Sum_probs=196.5
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC-----eeeEEEecC
Q 011349 59 VSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE-----ERLLVAEFM 132 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~ 132 (488)
.+.+|+|+||.||+|. ..++..||||+...+. +--.+|+++|+.++|||||++..+|.... ...+|||||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 3456999999999999 5567899999986544 34468999999999999999998886532 356899999
Q ss_pred CCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCCCCC--
Q 011349 133 PNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~~-- 207 (488)
+ .+|.+.+++. .+..++.-.+.-+..||++||.|||+.+ |+||||||+|+|+|.+ |.+||||||.|+....+.
T Consensus 105 P-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn 182 (364)
T KOG0658|consen 105 P-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN 182 (364)
T ss_pred h-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc
Confidence 8 7999998742 3567888899999999999999999999 9999999999999965 999999999999876543
Q ss_pred -ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-----------------------cccc
Q 011349 208 -SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----------------------GKNF 262 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-----------------------~~~~ 262 (488)
++..|..|+|||.+.| ..|+.+.||||.|||+.||+-|++.|++....... ...+
T Consensus 183 iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~ 262 (364)
T KOG0658|consen 183 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKF 262 (364)
T ss_pred eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccC
Confidence 5677999999999988 56999999999999999999999999876321110 0011
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.++....+...+....++++.+|+.++|..+|.+|.++.+++.|
T Consensus 263 p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 263 PQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11111112122445667899999999999999999999999987
No 39
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3e-44 Score=344.09 Aligned_cols=247 Identities=17% Similarity=0.210 Sum_probs=202.4
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+++.||+|+||.||+|. ..+|+.||||.+...... ....+.+|+.++++++|+||+++++++.+++..++||||+
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05631 3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIM 82 (285)
T ss_pred eEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEec
Confidence 567788999999999999 467999999998754322 2346789999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Ccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSY 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 209 (488)
++|+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.++|+|||++...... ...
T Consensus 83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05631 83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR 161 (285)
T ss_pred CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCC
Confidence 9999998886544557999999999999999999999999 999999999999999999999999999865432 234
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+. .....++...+..+.+|+.+|
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~-~~~~~~~-~~~~~~~~~~s~~~~~li~~~ 239 (285)
T cd05631 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE-EVDRRVK-EDQEEYSEKFSEDAKSICRML 239 (285)
T ss_pred CCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH-HHHHHhh-cccccCCccCCHHHHHHHHHH
Confidence 67999999999999999999999999999999999999886532111000 0000010 111223445677899999999
Q ss_pred ccCCCCCCCC-----HHHHHHH
Q 011349 290 LQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps-----~~~il~~ 306 (488)
|..||.+||+ ++++++|
T Consensus 240 l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 240 LTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred hhcCHHHhcCCCCCCHHHHhcC
Confidence 9999999997 8888886
No 40
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=332.18 Aligned_cols=245 Identities=20% Similarity=0.285 Sum_probs=200.3
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEcc--CCCCCChHHHHHHHHHHhhcCCCCCcccccceec-----CCeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFN--RSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE-----GEERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~lv 128 (488)
..++.||+|+||.|..+. ..+|..||||++. -....+.++..+|+++|+.++|+||+.+++++.. -..+|+|
T Consensus 25 ~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV 104 (359)
T KOG0660|consen 25 VLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLV 104 (359)
T ss_pred cccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEe
Confidence 346889999999999999 5679999999997 3444456788999999999999999999998865 3468999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
+|+|+ .+|...|+ .+..|+...+..++.||++||.|+|+.+ |+||||||+|+|++.+..+||||||+|+.....
T Consensus 105 ~elMe-tDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~ 180 (359)
T KOG0660|consen 105 FELME-TDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE 180 (359)
T ss_pred hhHHh-hHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccCc
Confidence 99994 89999996 4556999999999999999999999999 999999999999999999999999999987431
Q ss_pred ----CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhh-------------------hhhcccc
Q 011349 207 ----KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-------------------LIRGKNF 262 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~-------------------~~~~~~~ 262 (488)
+.+..|..|.|||.+.. ..||.+.||||.|||+.||++|++.|++...- .+.....
T Consensus 181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a 260 (359)
T KOG0660|consen 181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA 260 (359)
T ss_pred ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence 35567999999998855 77999999999999999999999999875210 0010001
Q ss_pred cccc---ccccCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLM---DSCLEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~---~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+ ....+. .++ ..++...+|+.+||..||.+|+|++++|+|
T Consensus 261 r~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 261 RPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111 111111 122 456789999999999999999999999998
No 41
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-44 Score=352.30 Aligned_cols=242 Identities=20% Similarity=0.320 Sum_probs=206.8
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.++++.||+|+||+|+++. ..+++.+|||+++++.. .+.+....|.+++... +||.+++++.+|.+.+++|+||
T Consensus 369 ~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvm 448 (694)
T KOG0694|consen 369 DFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVM 448 (694)
T ss_pred ceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEE
Confidence 44788999999999999999 45688999999998753 3456788899999888 4999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC----C
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----D 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~ 205 (488)
||+.||++..++ ....|++..+..++..|+.||.|||+++ |||||||.+|||||.+|++||+|||+++... .
T Consensus 449 ey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~ 524 (694)
T KOG0694|consen 449 EYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDR 524 (694)
T ss_pred EecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCCCCc
Confidence 999999965544 4567999999999999999999999999 9999999999999999999999999999654 3
Q ss_pred CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 206 GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
..+++|||.|||||++.+..|+.++|.|||||+||||+.|..||+++..+..-.. ++.. ...+|..++.+...+
T Consensus 525 TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fds----I~~d--~~~yP~~ls~ea~~i 598 (694)
T KOG0694|consen 525 TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDS----IVND--EVRYPRFLSKEAIAI 598 (694)
T ss_pred cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HhcC--CCCCCCcccHHHHHH
Confidence 4578999999999999999999999999999999999999999997644332221 1111 123566778999999
Q ss_pred HHHhccCCCCCCCC-----HHHHHHH
Q 011349 286 ASRCLQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps-----~~~il~~ 306 (488)
+.++|.++|++|.. +.+|..|
T Consensus 599 l~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 599 MRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred HHHHhccCcccccCCCCCCchhhhhC
Confidence 99999999999964 4556554
No 42
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.5e-44 Score=345.71 Aligned_cols=244 Identities=17% Similarity=0.172 Sum_probs=204.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 457788999999999999995 4689999999865432 224568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Ccc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSY 209 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 209 (488)
|+++|+|.+++. ..+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 82 YVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 999999999987 4457999999999999999999999999 999999999999999999999999999866443 245
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.||+.|+|||++.+..++.++|||||||++|+|+||+.||.......... .+... ...++...+..+.+++.+|
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~----~i~~~--~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE----KILAG--KLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHhC--CcCCCccCCHHHHHHHHHH
Confidence 68999999999998889999999999999999999999886543221111 11111 1123444567899999999
Q ss_pred ccCCCCCCCC-----HHHHHHHh
Q 011349 290 LQYEPRERPN-----AKSLVASL 307 (488)
Q Consensus 290 l~~dp~~Rps-----~~~il~~l 307 (488)
|+.||.+||+ +.+++.|-
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred cCCCHHHccCCccCCHHHHhcCc
Confidence 9999999995 99999873
No 43
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.9e-43 Score=346.22 Aligned_cols=250 Identities=19% Similarity=0.186 Sum_probs=205.3
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|... +++.||||+++... ......+.+|+.++..++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 4678899999999999999954 58899999997542 1234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-CCcc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-GKSY 209 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~~~~ 209 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ....
T Consensus 82 ~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 82 YVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 999999999996 4457899999999999999999999999 99999999999999999999999999986544 2355
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc--cccccccccccCCCCChhhHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG--KNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
.||+.|+|||++.+..++.++|||||||++|||++|..||.......... ......+............+.++.+++.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~ 238 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLIT 238 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHH
Confidence 78999999999999899999999999999999999999886543221110 0001111111110011234678999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 011349 288 RCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l 307 (488)
+||..+|.+||++.+++.+-
T Consensus 239 ~~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred HHhhChhhhcCCHHHHHhCc
Confidence 99999999999999999883
No 44
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-44 Score=309.91 Aligned_cols=244 Identities=20% Similarity=0.235 Sum_probs=211.0
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
++.+.||+|-||.||.|+ .+++-.||+|++.++.. ....++.+|+++-+.|+||||+++|++|.+....||++||.
T Consensus 25 eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya 104 (281)
T KOG0580|consen 25 EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYA 104 (281)
T ss_pred cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEec
Confidence 577889999999999999 56688899999876542 23568999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--CCccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYS 210 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~~~ 210 (488)
.+|+|...|.......+++.....++.|++.||.|+|.++ ||||||||+|+|++..+.+|++|||-+..... ..+.+
T Consensus 105 ~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlc 183 (281)
T KOG0580|consen 105 PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLC 183 (281)
T ss_pred CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeee
Confidence 9999999998666678999999999999999999999999 99999999999999999999999998876533 34789
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
||..|.+||+..+...+...|+|++|++.||++.|.+||.....+.. ...+.. ..-.+|..++.+..++|++|+
T Consensus 184 gt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~et----YkrI~k--~~~~~p~~is~~a~dlI~~ll 257 (281)
T KOG0580|consen 184 GTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSET----YKRIRK--VDLKFPSTISGGAADLISRLL 257 (281)
T ss_pred cccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHH----HHHHHH--ccccCCcccChhHHHHHHHHh
Confidence 99999999999999999999999999999999999999876532211 111111 122345667889999999999
Q ss_pred cCCCCCCCCHHHHHHHh
Q 011349 291 QYEPRERPNAKSLVASL 307 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l 307 (488)
.++|.+|.+..+++.|-
T Consensus 258 ~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 258 VKNPIERLALTEVMDHP 274 (281)
T ss_pred ccCccccccHHHHhhhH
Confidence 99999999999999874
No 45
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.2e-43 Score=344.71 Aligned_cols=238 Identities=18% Similarity=0.230 Sum_probs=199.3
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.||+|+||.||++. ..+++.||||++..... .....+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 57999999999999 45689999999975432 234568899999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cccccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTN 212 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t 212 (488)
|..++. ....+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 998886 3457999999999999999999999999 999999999999999999999999998754321 235689
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 292 (488)
+.|+|||++.+..++.++|||||||++|+|++|+.||.............. ....++...+.++.+++.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~------~~~~~p~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM------EDIKFPRTLSADAKSLLSGLLIK 232 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc------CCccCCCCCCHHHHHHHHHHcCC
Confidence 999999999988999999999999999999999998865432221111100 11123445678899999999999
Q ss_pred CCCCCC-----CHHHHHHHh
Q 011349 293 EPRERP-----NAKSLVASL 307 (488)
Q Consensus 293 dp~~Rp-----s~~~il~~l 307 (488)
||.+|| ++.++++|-
T Consensus 233 dP~~R~~~~~~~~~~il~h~ 252 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRHS 252 (328)
T ss_pred CHHHcCCCCCCCHHHHhcCC
Confidence 999997 899999873
No 46
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-43 Score=345.50 Aligned_cols=252 Identities=21% Similarity=0.250 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..+.+++.||+|+||.||++.. .++..||+|.+...... ....+.+|+++|++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 3567889999999999999995 46888999998765322 235799999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Ccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 209 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~ 209 (488)
++|++|.+++. ....+++..+..++.|++.||.|||+.+.|+||||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 99999999996 34568999999999999999999998644999999999999999999999999998765432 245
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc---cc--------c---------------
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK---NF--------L--------------- 263 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~---~~--------~--------------- 263 (488)
.+|+.|+|||++.+..++.++|||||||++|||+||+.||........... .. .
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 689999999999988899999999999999999999998854322111000 00 0
Q ss_pred ------------cccc---cccCCCC-ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 264 ------------MLMD---SCLEGHF-SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 264 ------------~~~~---~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
...+ ....... ....++++.+|+.+||+.||++|||+.++++|.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000 0000011 113467899999999999999999999999984
No 47
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-43 Score=347.35 Aligned_cols=245 Identities=19% Similarity=0.213 Sum_probs=203.8
Q ss_pred CCcccccccCCCCCCceEEEEEeCC--CcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDE--DRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+..+.+++.||+|+||.||+|.+.. +..||||++.... ....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3456788999999999999998433 3689999986432 1234568899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 109 v~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 109 VLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred EEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence 999999999999997 4457999999999999999999999999 999999999999999999999999999865433
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
....||+.|+|||++.+..++.++|||||||++|||++|..||........... +.... ..++...+..+.+++
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~----i~~~~--~~~p~~~~~~~~~li 259 (340)
T PTZ00426 186 YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK----ILEGI--IYFPKFLDNNCKHLM 259 (340)
T ss_pred ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH----HhcCC--CCCCCCCCHHHHHHH
Confidence 345789999999999988899999999999999999999998865432211111 11111 123444567889999
Q ss_pred HHhccCCCCCCC-----CHHHHHHH
Q 011349 287 SRCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rp-----s~~~il~~ 306 (488)
.+||+.||++|+ +++++++|
T Consensus 260 ~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 260 KKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHcccCHHHcCCCCCCCHHHHHcC
Confidence 999999999995 89999887
No 48
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.5e-43 Score=342.16 Aligned_cols=236 Identities=20% Similarity=0.230 Sum_probs=196.8
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||+|+||.||+|.. .+++.||||+++... ......+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999995 468899999987532 22345688999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNL 213 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~ 213 (488)
.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....||+
T Consensus 81 ~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQ--REGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 99986 3456999999999999999999999999 999999999999999999999999998754322 2356899
Q ss_pred CCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 214 ~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
.|+|||++.+..++.++|||||||++|||+||+.||........... .... ...++...++.+.+++.+||..|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRK----ILQE--PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHH----HHcC--CCCCCCcCCHHHHHHHHHHcCCC
Confidence 99999999998999999999999999999999999865432221111 1111 11334456788999999999999
Q ss_pred CCCCCC---HHHHHHH
Q 011349 294 PRERPN---AKSLVAS 306 (488)
Q Consensus 294 p~~Rps---~~~il~~ 306 (488)
|.+||+ +.+++.|
T Consensus 232 p~~R~~~~~~~e~l~h 247 (312)
T cd05585 232 PTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHcCCCCCHHHHHcC
Confidence 999975 6777766
No 49
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.9e-43 Score=351.11 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=200.0
Q ss_pred ccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
+.+.+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.++..+ +||||++++++|..++..++
T Consensus 37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~l 116 (375)
T cd05104 37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLV 116 (375)
T ss_pred eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCccee
Confidence 46778899999999999973 2356899999975432 2345788999999999 89999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------------------------------------------------------------
Q 011349 128 VAEFMPNETLSKHLFHWE-------------------------------------------------------------- 145 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~-------------------------------------------------------------- 145 (488)
||||++||+|.+++....
T Consensus 117 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (375)
T cd05104 117 ITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYID 196 (375)
T ss_pred eehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecc
Confidence 999999999999885321
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------c
Q 011349 146 -----------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------S 208 (488)
Q Consensus 146 -----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~ 208 (488)
...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++...... .
T Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 275 (375)
T cd05104 197 QDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGN 275 (375)
T ss_pred cccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCC
Confidence 125789999999999999999999999 9999999999999999999999999998654322 1
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||.+.+..++.++|||||||++|||++ |..|+....... .....+........+...+.++.+|+.
T Consensus 276 ~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~ 351 (375)
T cd05104 276 ARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS----KFYKMIKEGYRMLSPECAPSEMYDIMK 351 (375)
T ss_pred CCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH----HHHHHHHhCccCCCCCCCCHHHHHHHH
Confidence 233567999999999999999999999999999998 666665432111 111111111122223344678999999
Q ss_pred HhccCCCCCCCCHHHHHHHhch
Q 011349 288 RCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~ 309 (488)
+||+.||++|||+.+|++.|+.
T Consensus 352 ~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 352 SCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHccCChhHCcCHHHHHHHHHh
Confidence 9999999999999999999875
No 50
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.9e-43 Score=344.41 Aligned_cols=237 Identities=18% Similarity=0.238 Sum_probs=197.9
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.||+|+||.||++. ..+|..||+|+++.... .....+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 57999999999999 45689999999975421 223467889999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cccccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTN 212 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t 212 (488)
|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 82 L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 82 LFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 998886 3457999999999999999999999999 999999999999999999999999998753221 235689
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 292 (488)
+.|+|||++.+..++.++|||||||++|||++|+.||............ ... ...++...++++.+++.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~----~~~--~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI----LME--EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----hcC--CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999889999999999999999999999988654222111111 100 1123445678899999999999
Q ss_pred CCCCCC-----CHHHHHHH
Q 011349 293 EPRERP-----NAKSLVAS 306 (488)
Q Consensus 293 dp~~Rp-----s~~~il~~ 306 (488)
||.+|| ++.++++|
T Consensus 233 dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CHHHhCCCCCCCHHHHHcC
Confidence 999998 89999887
No 51
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.7e-43 Score=351.06 Aligned_cols=252 Identities=21% Similarity=0.323 Sum_probs=202.4
Q ss_pred cccccccCCCCCCceEEEEEe-C-----CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-D-----EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
.+.+.+.||+|+||.||+|.. . ++..||||+++...... ...+.+|+.+++.+ +|+|||+++++|...+..+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 346788899999999999873 2 23579999997654222 35688999999999 8999999999999999999
Q ss_pred EEEecCCCCChhhhhccCC-------------------------------------------------------------
Q 011349 127 LVAEFMPNETLSKHLFHWE------------------------------------------------------------- 145 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~------------------------------------------------------------- 145 (488)
+||||+++|+|.+++....
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 9999999999999885311
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------ccccc
Q 011349 146 -------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTN 212 (488)
Q Consensus 146 -------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t 212 (488)
..++++.++++++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++...... ...++
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~ 277 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence 135788999999999999999999999 9999999999999999999999999987654322 12235
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
+.|+|||++.+..++.++|||||||++|||++ |+.||+...... ..............+...++++.+++.+||+
T Consensus 278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 353 (374)
T cd05106 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS----KFYKMVKRGYQMSRPDFAPPEIYSIMKMCWN 353 (374)
T ss_pred cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH----HHHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence 67999999988899999999999999999997 888876532111 1111111112222333456889999999999
Q ss_pred CCCCCCCCHHHHHHHhchhh
Q 011349 292 YEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 292 ~dp~~Rps~~~il~~l~~~~ 311 (488)
.||.+|||+.++++.|+++.
T Consensus 354 ~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 354 LEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CChhhCcCHHHHHHHHHHHh
Confidence 99999999999999998753
No 52
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.2e-43 Score=333.58 Aligned_cols=249 Identities=20% Similarity=0.274 Sum_probs=203.3
Q ss_pred cccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+.+.+.||+|+||.||+|.+. .+..||+|.++..... ....+.+|+.++.+++||||+++++++..++..++||
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 85 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVT 85 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEE
Confidence 4577888999999999999843 3668999999865422 2357899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.++++|||.+.......
T Consensus 86 e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (266)
T cd05064 86 EYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY 163 (266)
T ss_pred EeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchh
Confidence 99999999999864 2357899999999999999999999999 9999999999999999999999999876543221
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...++..|+|||.+.+..++.++|||||||++||+++ |..||........ ...+........+..++..+.
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 238 (266)
T cd05064 164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV-----IKAVEDGFRLPAPRNCPNLLH 238 (266)
T ss_pred cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH-----HHHHHCCCCCCCCCCCCHHHH
Confidence 2234578999999998999999999999999999775 8888765422211 111111112233455678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+++.+||+.+|.+||++.+|++.|.++
T Consensus 239 ~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 239 QLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999988754
No 53
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6e-43 Score=330.79 Aligned_cols=250 Identities=22% Similarity=0.309 Sum_probs=207.5
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+.++++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 4567889999999999999998788889999987543 235689999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 163 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceeccCC
Confidence 999999997555567899999999999999999999999 9999999999999999999999999998654322 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||++.+..++.++|||||||++|+|+| |..|+........... +......+.....+.++.+++.
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~ 238 (261)
T cd05072 164 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA-----LQRGYRMPRMENCPDELYDIMK 238 (261)
T ss_pred CccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH-----HHcCCCCCCCCCCCHHHHHHHH
Confidence 234568999999988889999999999999999998 8877754322111111 1111111222345678999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchh
Q 011349 288 RCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+||..+|++||+++++.+.|+.+
T Consensus 239 ~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 239 TCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHccCCcccCcCHHHHHHHHhcC
Confidence 99999999999999999998753
No 54
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-43 Score=368.50 Aligned_cols=253 Identities=24% Similarity=0.378 Sum_probs=210.3
Q ss_pred cccccCCCCCCceEEEEEeCC--Cc----EEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE--DR----WIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+...||+|+||.||+|.+.+ |. .||||.++... .+...+|.+|..+|+.++|||||+++|+|.+....+|++
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l 774 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL 774 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence 445678999999999999543 43 38999998764 334568999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 130 EFMPNETLSKHLFHW-----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 130 e~~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
|||+||+|..+|++. ....++....+.++.|||+|+.||++++ +|||||..+|+||+....|||+|||+|+...
T Consensus 775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDIY 853 (1025)
T ss_pred hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhhh
Confidence 999999999999863 1456899999999999999999999999 9999999999999999999999999999554
Q ss_pred CCCcc------ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccc-ccccccCCCCChh
Q 011349 205 DGKSY------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM-LMDSCLEGHFSND 277 (488)
Q Consensus 205 ~~~~~------~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 277 (488)
....+ .-...|||||.+..+.+|.|+|||||||+|||++|...+|+.. .....+.. ..... +-..|..
T Consensus 854 ~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~----~~n~~v~~~~~~gg-RL~~P~~ 928 (1025)
T KOG1095|consen 854 DKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPS----RSNFEVLLDVLEGG-RLDPPSY 928 (1025)
T ss_pred hchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCC----cchHHHHHHHHhCC-ccCCCCC
Confidence 43211 2246899999999999999999999999999999976655543 11122222 11222 4566778
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
||..+.+||..||+.+|++||++..|++.+..+.....
T Consensus 929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 89999999999999999999999999998887766543
No 55
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-43 Score=304.96 Aligned_cols=257 Identities=18% Similarity=0.193 Sum_probs=210.9
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC-----ee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE-----ER 125 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 125 (488)
|-+.|+|.+.||+|||+.||+++ ..++..+|+|++......+.+...+|++..++++||||++++++...+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34578999999999999999999 7789999999998877677888999999999999999999999886544 48
Q ss_pred eEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeecCCCCCeeccCCCccc
Q 011349 126 LLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
||+++|...|||.+.+... ++..+++.+++.|+.+|++||.+||+.. +++||||||.|||+++.+.++|.|||.+..
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 9999999999999998753 4457999999999999999999999985 599999999999999999999999999875
Q ss_pred CCCC-------------CccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-ccc
Q 011349 203 SRDG-------------KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LML 265 (488)
Q Consensus 203 ~~~~-------------~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~ 265 (488)
..-. .....|..|.|||.+.- ...+.++|||||||+||+|+.|..||..... .+..+ ..+
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLAv 255 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALAV 255 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEee
Confidence 5321 12345899999999864 4578899999999999999999999864321 11111 112
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
......-+-....+..+.+++..|++.||.+||++.+++..+..+.
T Consensus 256 ~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 256 QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 2212211222236789999999999999999999999999987653
No 56
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=8.1e-43 Score=330.30 Aligned_cols=249 Identities=21% Similarity=0.335 Sum_probs=207.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
++.+.+.||+|+||.||+|.. ++++.||+|++.... .....+.+|+.+++.++|+||+++++++...+..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 346677889999999999994 458889999987543 345679999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++....... .
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~ 164 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 164 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeeccCC
Confidence 999999987544567899999999999999999999999 9999999999999999999999999988765432 1
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||.+.+..++.++|||||||++|||++ |..|++....... ...+........+...+.++.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~ 239 (263)
T cd05052 165 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YELLEKGYRMERPEGCPPKVYELMR 239 (263)
T ss_pred CCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 123567999999998899999999999999999998 8877765422211 1111122233445556789999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchh
Q 011349 288 RCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+||..+|++|||+.++++.|+.+
T Consensus 240 ~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 240 ACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHccCCcccCCCHHHHHHHHHhh
Confidence 99999999999999999998865
No 57
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=8e-43 Score=337.55 Aligned_cols=252 Identities=21% Similarity=0.254 Sum_probs=197.8
Q ss_pred cccccccCCCCCCceEEEEEeCC-----------------CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccc
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE-----------------DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLI 116 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~ 116 (488)
.+.+.++||+|+||.||+|.+.+ +..||||.+...... ....+.+|+.++.+++||||++++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 45678889999999999997532 346999998765322 235789999999999999999999
Q ss_pred cceecCCeeeEEEecCCCCChhhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc
Q 011349 117 GCCCEGEERLLVAEFMPNETLSKHLFHWE-----------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179 (488)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dl 179 (488)
+++.+.+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dl 164 (304)
T cd05096 86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDL 164 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCc
Confidence 99999999999999999999999885321 134788899999999999999999999 999999
Q ss_pred cCCceeecCCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCC--CCCCc
Q 011349 180 NTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK--HIPPS 251 (488)
Q Consensus 180 kp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~--~p~~~ 251 (488)
||+|||++.++.+||+|||+++...... ...++..|+|||++.++.++.++|||||||++|||+++. .|+..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 9999999999999999999998654322 223467899999998888999999999999999998754 44433
Q ss_pred chhhhhhccccccccc---cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 252 HALDLIRGKNFLMLMD---SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 252 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
........ ....... .......+..++..+.+++.+||+.+|++|||+.+|.+.|+
T Consensus 245 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 245 LTDEQVIE-NAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCHHHHHH-HHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 21111100 0000000 01111223456788999999999999999999999998875
No 58
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.4e-43 Score=347.08 Aligned_cols=247 Identities=23% Similarity=0.218 Sum_probs=203.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++..++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 457888999999999999995 4689999999975421 234578899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++|++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999999974 367999999999999999999999999 9999999999999999999999999987654322
Q ss_pred ------------------------------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh
Q 011349 208 ------------------------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI 257 (488)
Q Consensus 208 ------------------------------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~ 257 (488)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 34678999999999999999999999999999999999998865432211
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC-HHHHHHHh
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN-AKSLVASL 307 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~il~~l 307 (488)
... +.... .....+.....++++.+++.+||. +|.+||+ +.++++|.
T Consensus 239 ~~~-i~~~~-~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 239 YNK-IINWK-ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred HHH-HhccC-CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 110 00000 111111112247889999999997 9999999 99999973
No 59
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.5e-42 Score=327.19 Aligned_cols=246 Identities=21% Similarity=0.313 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++.+++.||+|+||.||++.+.++..+|+|.+.... .....+.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 3457788999999999999998788889999987543 335678999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+|+|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++...... .
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 83 NGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 99999988642 346899999999999999999999999 9999999999999999999999999987654322 1
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||.+.+..++.++||||||+++|||++ |+.|+........... + ........+...+..+.+++.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~----i-~~~~~~~~~~~~~~~~~~li~ 235 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEM----I-SRGFRLYRPKLASMTVYEVMY 235 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----H-HCCCCCCCCCCCCHHHHHHHH
Confidence 234567999999998889999999999999999999 7777654321111100 0 001111123334578999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 011349 288 RCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l 307 (488)
+||..+|.+||++.++++.|
T Consensus 236 ~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 236 SCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHccCCcccCcCHHHHHHhh
Confidence 99999999999999999876
No 60
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=8.5e-43 Score=333.82 Aligned_cols=250 Identities=23% Similarity=0.349 Sum_probs=204.7
Q ss_pred cccccccCCCCCCceEEEEEeCC-C-----cEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE-D-----RWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
++.+++.||+|+||.||+|.... + ..||+|.++..... ....+.+|+.++++++||||+++++++......++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 45778899999999999998432 2 57999998754422 23568999999999999999999999998889999
Q ss_pred EEecCCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 128 VAEFMPNETLSKHLFHWEN--------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
+|||+++++|.+++..... ..+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~ 164 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVK 164 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcEE
Confidence 9999999999999864211 45889999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccc
Q 011349 194 LSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 194 l~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 266 (488)
|+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+...... ...+
T Consensus 165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~-----~~~i 239 (283)
T cd05048 165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV-----IEMI 239 (283)
T ss_pred ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHH
Confidence 9999998765332 12345788999999988899999999999999999998 8888765322211 1111
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
........+..++.++.+|+.+||+.+|.+||++.+|+++|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 240 RSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11122234456778999999999999999999999999999753
No 61
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=9.9e-43 Score=347.17 Aligned_cols=247 Identities=19% Similarity=0.178 Sum_probs=198.1
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||+|. ..+++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 35788999999999999999 45688999999975432 223568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++....
T Consensus 82 ~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 999999999986 3456899999999999999999999999 99999999999999999999999999753210
Q ss_pred ----------------------------------------------CCccccccCCCCccccccCCcccCCceEeehHHH
Q 011349 206 ----------------------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 239 (488)
Q Consensus 206 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il 239 (488)
.....||+.|+|||.+.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 0124689999999999988899999999999999
Q ss_pred HHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH--hccCCCCCCCCHHHHHHH
Q 011349 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR--CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 240 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dp~~Rps~~~il~~ 306 (488)
|||+||..||.............. .......+.....++++.+++.+ |+..+|..||++.+++.|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVIN--WENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHc--cccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 999999998865432211111000 00111111112346788999988 445666679999999998
No 62
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.3e-42 Score=333.14 Aligned_cols=249 Identities=19% Similarity=0.219 Sum_probs=199.0
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||+|... +++.||||+++.... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 4578889999999999999954 688899999875432 2345788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
++++++..+.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99877765443 3456999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh--hccc------------------ccccc
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--RGKN------------------FLMLM 266 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--~~~~------------------~~~~~ 266 (488)
....+|+.|+|||++.+..++.++|||||||++|||++|++||+....... .... .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 234678999999999988899999999999999999999988865421110 0000 00000
Q ss_pred ccccC------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DSCLE------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+... .......+..+.+|+.+||+.||++|||++++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 00111246779999999999999999999999976
No 63
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-42 Score=338.64 Aligned_cols=238 Identities=20% Similarity=0.256 Sum_probs=197.6
Q ss_pred ccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC----CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 60 SEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW----PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.||+|+||.||++.. .+++.||||+++.... .....+.+|+.+|+.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5689999999999984 3578899999875321 2234678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 99999999986 4456889999999999999999999999 999999999999999999999999998753322 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ....+...++.+.+++.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTI----DKILKG--KLNLPPYLTPEARDLLK 232 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHH----HHHHcC--CCCCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999988654322111 111111 11234455788999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 011349 288 RCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rp-----s~~~il~~ 306 (488)
+||+.+|++|| ++.+++.+
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhcC
Confidence 99999999999 89998886
No 64
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.2e-43 Score=341.92 Aligned_cols=238 Identities=20% Similarity=0.237 Sum_probs=197.7
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.||+|+||.||++. ..+|+.||+|++..... .....+.+|++++..++||||+++++++...+..++||||++||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 57999999999999 45789999999975421 224567889999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYST 211 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~ 211 (488)
|..++. ....+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++..... ....|
T Consensus 82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 82 LFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 998886 34579999999999999999999997 67 999999999999999999999999998753221 23468
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||+||+.||............. . ....++...++++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~----~--~~~~~p~~~~~~~~~li~~~L~ 232 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----M--EEIRFPRTLSPEAKSLLSGLLK 232 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh----c--CCCCCCCCCCHHHHHHHHHHhh
Confidence 999999999998899999999999999999999999886543221111100 0 0112344557889999999999
Q ss_pred CCCCCCC-----CHHHHHHHh
Q 011349 292 YEPRERP-----NAKSLVASL 307 (488)
Q Consensus 292 ~dp~~Rp-----s~~~il~~l 307 (488)
.||++|+ ++.++++|-
T Consensus 233 ~dP~~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQHK 253 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcCC
Confidence 9999996 899999873
No 65
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5.8e-43 Score=345.49 Aligned_cols=247 Identities=18% Similarity=0.188 Sum_probs=196.6
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.++++.+++.||+|+||.||+|.. .+++.||||++...... ....+.+|+++++.++|+||+++++++...+..++||
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 344556778899999999999994 46899999998654322 2357899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||+++++|.+.. ..++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 152 e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 152 EFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred ecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence 999999986543 3567888999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 -KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....||..|+|||++.. ...+.++|||||||++|||++|+.||.......+.. ....+........+...+.
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 302 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWAS--LMCAICMSQPPEAPATASR 302 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHH--HHHHHhccCCCCCCCccCH
Confidence 24578999999998753 234568999999999999999999886321111100 0000000111223345578
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+|+.+||..||++|||+.++++|-
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 899999999999999999999999983
No 66
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.9e-44 Score=336.70 Aligned_cols=244 Identities=27% Similarity=0.449 Sum_probs=194.7
Q ss_pred ccccCCCCCCceEEEEEeC-----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 58 IVSEHGEKAPNVVYKGLVD-----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.+.||.|+||.||+|.+. .+..|+||.++..... ..+.+.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4567899999999999965 3667999999764322 257899999999999999999999999988889999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
+++|+|.++|.......+++.+++.|+.||+.||.|||+.+ ++|+||+++||++++++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 99999999998654678999999999999999999999998 999999999999999999999999999876322
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
........|+|||.+.+..++.++||||||+++|||+| |+.|+....... +...+........+..++..+.+
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 236 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE-----IIEKLKQGQRLPIPDNCPKDIYS 236 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH-----HHHHHHTTEETTSBTTSBHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccccceeccchhHHHHH
Confidence 22345678999999998889999999999999999999 566654432111 11111122223344456788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+||+.+|++|||+.++++.|
T Consensus 237 li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 237 LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHhcC
Confidence 99999999999999999999875
No 67
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=9.8e-43 Score=329.30 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=209.8
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
+.+++.||.|+||.||+|...++..||+|++..........+.+|+.+++.++|+||+++++++......++||||++++
T Consensus 8 y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (261)
T cd05148 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKG 87 (261)
T ss_pred HHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccC
Confidence 56788899999999999997778999999998776555678999999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~~~ 211 (488)
+|.+++.......+++.++..++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++....... ...+
T Consensus 88 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~ 166 (261)
T cd05148 88 SLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI 166 (261)
T ss_pred CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCC
Confidence 9999997655667999999999999999999999999 9999999999999999999999999987654321 2234
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
+..|++||.+.+..++.++||||||+++|+|++ |..|+........ + ..+........+..++..+.+++.+||
T Consensus 167 ~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~i~~~l 241 (261)
T cd05148 167 PYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV----Y-DQITAGYRMPCPAKCPQEIYKIMLECW 241 (261)
T ss_pred ceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH----H-HHHHhCCcCCCCCCCCHHHHHHHHHHc
Confidence 568999999988889999999999999999998 7777654321111 1 111112222344566788999999999
Q ss_pred cCCCCCCCCHHHHHHHhchh
Q 011349 291 QYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l~~~ 310 (488)
..+|.+|||+.++++.|+.+
T Consensus 242 ~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 242 AAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCchhCcCHHHHHHHHhcC
Confidence 99999999999999998753
No 68
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.7e-42 Score=337.13 Aligned_cols=252 Identities=16% Similarity=0.264 Sum_probs=203.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCc----EEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDR----WIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++++++.||+|+||.||+|.+ .++. .||||+++.... ...+.+.+|+.+++.++||||+++++++... ..++|
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v 86 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI 86 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceee
Confidence 457788899999999999984 3344 389999975432 2346789999999999999999999998764 57899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
+||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 87 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 164 (316)
T cd05108 87 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK 164 (316)
T ss_pred eecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCc
Confidence 999999999999874 2346899999999999999999999999 9999999999999999999999999998764322
Q ss_pred -----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...++..|+|||.+.+..++.++|||||||++|||+| |..|+.+...... ...+........+..++..
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd05108 165 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-----SSILEKGERLPQPPICTID 239 (316)
T ss_pred ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHhCCCCCCCCCCCCHH
Confidence 1223568999999998899999999999999999998 8877754322211 1111111122223445678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+.+++.+||..+|.+||++.+++..|..+....
T Consensus 240 ~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 240 VYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999998887654
No 69
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.7e-42 Score=318.76 Aligned_cols=249 Identities=20% Similarity=0.246 Sum_probs=199.7
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCC-CcccccceecCC------ee
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSER-LVNLIGCCCEGE------ER 125 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~------~~ 125 (488)
+..+++||+|+||+||+|+ ..+|+.||+|++...... ......+|+.+|+.++|+| ||++++++...+ ..
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l 92 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL 92 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence 4556678999999999999 667999999999876532 3456799999999999999 999999998877 78
Q ss_pred eEEEecCCCCChhhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 126 LLVAEFMPNETLSKHLFHWEN--QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
++|+||++ .+|..++..... ..++...+..++.||+.||+|||+++ |+||||||.|||++++|.+||+|||+|+..
T Consensus 93 ~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 93 YLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred EEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchHHHh
Confidence 99999997 799999975332 35788899999999999999999999 999999999999999999999999999865
Q ss_pred CC----CCccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-----------cccccccc-
Q 011349 204 RD----GKSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----------GKNFLMLM- 266 (488)
Q Consensus 204 ~~----~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-----------~~~~~~~~- 266 (488)
.- -.+..+|..|.|||++.|. .|+...||||+|||+.||+++++.|++....... ...+....
T Consensus 171 ~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~ 250 (323)
T KOG0594|consen 171 SIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSS 250 (323)
T ss_pred cCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccc
Confidence 42 2345679999999999885 6999999999999999999999988876321110 01110000
Q ss_pred ----ccccC-----CCCChh---hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 ----DSCLE-----GHFSND---DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ----~~~~~-----~~~~~~---~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..... ...... ..+...+++.+||+.+|.+|.|+..++.|
T Consensus 251 ~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 251 LPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00000 001111 12478999999999999999999999998
No 70
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-43 Score=338.60 Aligned_cols=241 Identities=21% Similarity=0.272 Sum_probs=204.5
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 59 VSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++.||+|+||-||-|. ..+.+.||||+++-+..+. ..++.+|+..|++++|||+|.+-|||......+||||||-
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl- 109 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL- 109 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-
Confidence 4678999999999999 5678889999998765444 4579999999999999999999999999999999999996
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccccC
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 214 (488)
||-.|++.- ...++-+..+..|..+.+.||+|||+.+ .||||||..|||+++.|.|||+|||.|....+..+++|||.
T Consensus 110 GSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPy 187 (948)
T KOG0577|consen 110 GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPY 187 (948)
T ss_pred ccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCCcc
Confidence 787787743 4567999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 215 FTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 215 y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|||||++.. +.|+-++|||||||+..||.-.++|...... +. .+-.+-....+.-.....+..+.+++..||+
T Consensus 188 wMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-MS---ALYHIAQNesPtLqs~eWS~~F~~Fvd~CLq 263 (948)
T KOG0577|consen 188 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MS---ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQ 263 (948)
T ss_pred ccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-HH---HHHHHHhcCCCCCCCchhHHHHHHHHHHHHh
Confidence 999999854 7899999999999999999999977544311 00 0111111111111244678899999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 011349 292 YEPRERPNAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~~il~~ 306 (488)
+-|.+|||.++++.|
T Consensus 264 KipqeRptse~ll~H 278 (948)
T KOG0577|consen 264 KIPQERPTSEELLKH 278 (948)
T ss_pred hCcccCCcHHHHhhc
Confidence 999999999999886
No 71
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=8.2e-43 Score=346.12 Aligned_cols=246 Identities=17% Similarity=0.136 Sum_probs=199.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++..++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 457788999999999999994 5689999999975321 223467889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||+++.....
T Consensus 82 ~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 82 YLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999987 3456999999999999999999999999 999999999999999999999999998653211
Q ss_pred --------------------------------------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCC
Q 011349 207 --------------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI 248 (488)
Q Consensus 207 --------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p 248 (488)
....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 023589999999999988999999999999999999999998
Q ss_pred CCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC---HHHHHHH
Q 011349 249 PPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN---AKSLVAS 306 (488)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~ 306 (488)
|............ ... ............++.+.+++.+|+. +|.+|++ +.+++.|
T Consensus 239 f~~~~~~~~~~~i-~~~-~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 239 FCSDNPQETYRKI-INW-KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCHHHHHHHH-HcC-CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 8654322111000 000 0001101111346788999999996 9999987 9999887
No 72
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-42 Score=339.64 Aligned_cols=250 Identities=21% Similarity=0.269 Sum_probs=200.6
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.++++||.|+||.||++... ++..||+|.+...... ....+.+|++++++++||||++++++|..++..++||||+
T Consensus 6 ~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 85 (333)
T cd06650 6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 85 (333)
T ss_pred hhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecC
Confidence 4578889999999999999954 6888999998764322 2356899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYS 210 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~ 210 (488)
++++|.+++. ....+++..+..++.|++.||.|||+.++++||||||+|||+++++.+||+|||++...... ....
T Consensus 86 ~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 163 (333)
T cd06650 86 DGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (333)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence 9999999996 34568999999999999999999998533999999999999999999999999998765332 3456
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-------cccc--------------------
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------KNFL-------------------- 263 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-------~~~~-------------------- 263 (488)
+|..|+|||++.+..++.++|||||||++|||++|+.||.......... ....
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (333)
T cd06650 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGP 243 (333)
T ss_pred CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcc
Confidence 8899999999998889999999999999999999998876432111100 0000
Q ss_pred ---------cccccc---cCCCCC-hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 ---------MLMDSC---LEGHFS-NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ---------~~~~~~---~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+.. .....+ ...+.++.+|+.+||+.||++|||+.+++.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 244 DSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred cccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 000000 000011 1235678999999999999999999999987
No 73
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.2e-42 Score=325.84 Aligned_cols=248 Identities=22% Similarity=0.328 Sum_probs=205.8
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+++++.||+|++|.||+|...+++.||||.++... ...+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred heeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence 357788899999999999997777889999997654 3456799999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--cc---
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--SY--- 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~~--- 209 (488)
++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++...... ..
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 164 (261)
T cd05068 86 GSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGA 164 (261)
T ss_pred CcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCC
Confidence 99999997544457999999999999999999999999 9999999999999999999999999988664322 11
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+..|+|||.+.+..++.++||||||+++|||+| |+.|+......... ..+........+...+..+.+++.+
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~ 239 (261)
T cd05068 165 KFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL-----QQVDQGYRMPCPPGCPKELYDIMLD 239 (261)
T ss_pred cCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 12357999999998889999999999999999999 88776543221111 1111111122344567889999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|.+||++.+++..|+.
T Consensus 240 ~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 240 CWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HhhcCcccCCCHHHHHHHHhc
Confidence 999999999999999999875
No 74
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.7e-42 Score=332.52 Aligned_cols=251 Identities=19% Similarity=0.246 Sum_probs=199.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.|.++++||.|+||.||+|.. .+++.||+|+++.... .....+.+|+.++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 45678889999999999999994 4688999999875432 234568899999999999999999999999899999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 84 YLD-SDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred CCC-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence 997 589888854 3345899999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc--------------------cccccc
Q 011349 207 KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG--------------------KNFLML 265 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~--------------------~~~~~~ 265 (488)
....+++.|+|||.+.+ ..++.++|||||||++|||+||++||.......... ..+...
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY 240 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence 23467899999999875 568999999999999999999998886542211000 000000
Q ss_pred cccccCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 MDSCLEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ~~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.... ......+.++.+|+.+||..||.+|||++++++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 0011345678999999999999999999999976
No 75
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.7e-42 Score=338.06 Aligned_cols=242 Identities=19% Similarity=0.279 Sum_probs=197.4
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHH---hhcCCCCCcccccceecCCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAV---GLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
|++++.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++ +.++||||+++++++..++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 35778899999999999994 568999999997542 12234566776665 566799999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
|||++|++|...+. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 99999999998884 456999999999999999999999999 99999999999999999999999999875332
Q ss_pred -CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 206 -GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 206 -~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||........... +... ...++...+..+.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~ 230 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDS----IVND--EVRYPRFLSREAIS 230 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CCCCCCCCCHHHHH
Confidence 2245689999999999998999999999999999999999998865432211111 1111 11234455788999
Q ss_pred HHHHhccCCCCCCC-----CHHHHHHHh
Q 011349 285 LASRCLQYEPRERP-----NAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rp-----s~~~il~~l 307 (488)
++.+||..||.+|| ++.+++++-
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 99999999999999 678887763
No 76
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.1e-42 Score=344.69 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=203.2
Q ss_pred cccccccCCCCCCceEEEEEeC-C-----CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcC-CCCCcccccceecCCeee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-E-----DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 126 (488)
.+.+++.||+|+||.||+|... . +..||||+++..... ..+.+.+|+.++.++. ||||+++++++...+..+
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~ 117 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIY 117 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceE
Confidence 4567889999999999999842 1 346999999765432 2457899999999996 999999999999999999
Q ss_pred EEEecCCCCChhhhhccCC-------------------------------------------------------------
Q 011349 127 LVAEFMPNETLSKHLFHWE------------------------------------------------------------- 145 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~------------------------------------------------------------- 145 (488)
+||||+++|+|.+++....
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T cd05105 118 IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEA 197 (400)
T ss_pred EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhh
Confidence 9999999999998875321
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCC
Q 011349 146 ---------------------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNP 192 (488)
Q Consensus 146 ---------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~ 192 (488)
...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~ 276 (400)
T cd05105 198 SKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIV 276 (400)
T ss_pred hhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEE
Confidence 124788899999999999999999999 9999999999999999999
Q ss_pred eeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccc
Q 011349 193 RLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLML 265 (488)
Q Consensus 193 kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 265 (488)
||+|||+++...... ...+++.|+|||.+.+..++.++|||||||++|||++ |..|++....+.. +...
T Consensus 277 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~----~~~~ 352 (400)
T cd05105 277 KICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST----FYNK 352 (400)
T ss_pred EEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH----HHHH
Confidence 999999987653321 2345678999999998889999999999999999997 8877765322111 0111
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
+........+...+..+.+++.+||..+|++|||+.+|.+.|+.+.+
T Consensus 353 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 353 IKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11111222344567889999999999999999999999999987654
No 77
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.9e-42 Score=334.68 Aligned_cols=250 Identities=18% Similarity=0.170 Sum_probs=196.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||+|+||.||+|.. .+++.||||+++..... ....+.+|+.+++.++||||+++++++.++...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 3567889999999999999995 46889999999754322 234678999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++..... .
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 85 VH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 96 678777754 3456899999999999999999999999 999999999999999999999999998754321 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc--------cc----------cccc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF--------LM----------LMDS 268 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~--------~~----------~~~~ 268 (488)
...+|+.|+|||++.+ ..++.++|||||||++|||+||..||.+........... .. ....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 3467899999999875 457889999999999999999999886531110000000 00 0000
Q ss_pred ccCCCCC---------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 CLEGHFS---------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ~~~~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......+ ...+..+.+|+.+||+.||.+|||+.++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 0000000 0123568899999999999999999999986
No 78
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.6e-42 Score=343.93 Aligned_cols=248 Identities=19% Similarity=0.171 Sum_probs=202.3
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+...+.+++.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 445678889999999999999994 468899999986432 1233457899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||++||+|.+++. +..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 121 VMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999999885 345889999999999999999999999 999999999999999999999999998765432
Q ss_pred ----CccccccCCCCccccccC----CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC--h
Q 011349 207 ----KSYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS--N 276 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 276 (488)
....||+.|+|||.+.+. .++.++|||||||++|||++|+.||........ ...+........++ .
T Consensus 197 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~ 272 (370)
T cd05596 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----YSKIMDHKNSLTFPDDI 272 (370)
T ss_pred cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH----HHHHHcCCCcCCCCCcC
Confidence 245689999999998653 478899999999999999999999876532211 11111111111122 2
Q ss_pred hhHHHHHHHHHHhccCCCCC--CCCHHHHHHHh
Q 011349 277 DDGTELVRLASRCLQYEPRE--RPNAKSLVASL 307 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~--Rps~~~il~~l 307 (488)
..+.++.+++.+||..+|.+ |+|+.+++.|-
T Consensus 273 ~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 273 EISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred CCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 35688999999999999988 99999999884
No 79
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.8e-42 Score=337.13 Aligned_cols=237 Identities=20% Similarity=0.272 Sum_probs=195.8
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 579999999999995 468899999987532 22345678899998877 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 9999886 4457999999999999999999999999 99999999999999999999999999875322 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||............ ... ....+...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i----~~~--~~~~~~~~~~~~~~li~~~L~ 232 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI----LND--EVVYPTWLSQDAVDILKAFMT 232 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH----hcC--CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999988654322211111 111 112333456789999999999
Q ss_pred CCCCCCCCH------HHHHHH
Q 011349 292 YEPRERPNA------KSLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~------~~il~~ 306 (488)
.||.+||++ ++++.|
T Consensus 233 ~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 233 KNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred cCHHHCCCCCCCCCHHHHHcC
Confidence 999999998 677665
No 80
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3e-42 Score=330.04 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=202.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
++.+++++.||+|+||.||+|.. .++..||+|.+..... .....+.+|+.+++.++||||+++++++..+...+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 34567889999999999999983 2467899999975432 22357889999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWE---------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
+||||+++++|.+++.... ...+++.++..++.|++.||.|||+++ ++||||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCc
Confidence 9999999999999885211 235889999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++ |..|+.+...... ..
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-----~~ 237 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-----IE 237 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-----HH
Confidence 999999999765332 22334667999999988889999999999999999999 7777654321111 11
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
.+........+..++..+.+++.+||+.+|.+||++.+|++.|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111122344567889999999999999999999999999865
No 81
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.3e-42 Score=324.80 Aligned_cols=246 Identities=23% Similarity=0.314 Sum_probs=201.8
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++.+++.||+|+||.||+|.+.++..||||.+.... .....+.+|+.++++++||||+++++++......++||||+.+
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 457888999999999999997777779999987544 3456799999999999999999999999988889999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++...... ..
T Consensus 84 ~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 161 (256)
T cd05113 84 GCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGS 161 (256)
T ss_pred CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCC
Confidence 9999998642 336899999999999999999999999 9999999999999999999999999987654322 12
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|++||.+.+..++.++|||||||++|+|+| |..|+............ ........+...+..+.+++.+
T Consensus 162 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05113 162 KFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV-----SQGLRLYRPHLASEKVYAIMYS 236 (256)
T ss_pred ccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-----hcCCCCCCCCCCCHHHHHHHHH
Confidence 34567999999988889999999999999999999 87776543221111110 1111111223346789999999
Q ss_pred hccCCCCCCCCHHHHHHHhc
Q 011349 289 CLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~ 308 (488)
||..+|.+||++.+++..|+
T Consensus 237 cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 237 CWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HcCCCcccCCCHHHHHHhhC
Confidence 99999999999999998864
No 82
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.6e-42 Score=345.47 Aligned_cols=247 Identities=18% Similarity=0.162 Sum_probs=199.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.|.+++.||+|+||.||+|. ..+++.||||++.... ......+.+|+.+|++++||||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 356889999999999999999 4568999999986432 122456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 9999999999996 3456899999999999999999999999 99999999999999999999999999742210
Q ss_pred -------------------------------------------CCccccccCCCCccccccCCcccCCceEeehHHHHHH
Q 011349 206 -------------------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242 (488)
Q Consensus 206 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el 242 (488)
.....||+.|+|||++.+..++.++|||||||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0124689999999999998999999999999999999
Q ss_pred hhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC---CHHHHHHH
Q 011349 243 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP---NAKSLVAS 306 (488)
Q Consensus 243 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~ 306 (488)
++|+.||............. ..............++++.+++.+|+ .+|.+|+ ++.+++.|
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVI--NWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHh--ccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999987543221111100 00011111112235677889999977 5999999 89999988
No 83
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.7e-42 Score=336.24 Aligned_cols=237 Identities=18% Similarity=0.247 Sum_probs=196.1
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++... ....+.+..|.+++..+ +||||+++++++..++..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 579999999999995 458899999987542 12334677899999876 7999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|...+. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 82 DLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 9998886 4456999999999999999999999999 99999999999999999999999999875432 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||+||+.||........... +... ....+...+.++.+++.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~ll~~~L~ 232 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFES----ILHD--DVLYPVWLSKEAVSILKAFMT 232 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHHHHhc
Confidence 9999999999988999999999999999999999998865432221111 1111 112233456789999999999
Q ss_pred CCCCCCC-------CHHHHHHH
Q 011349 292 YEPRERP-------NAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rp-------s~~~il~~ 306 (488)
.||++|| ++.++++|
T Consensus 233 ~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 233 KNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred cCHHHcCCCCCCCCCHHHHhcC
Confidence 9999999 88888877
No 84
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.9e-42 Score=339.07 Aligned_cols=247 Identities=19% Similarity=0.223 Sum_probs=199.1
Q ss_pred ccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCC----CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSA----WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
+.+++.||+|+||.||++.. .+++.||+|++.... ....+.+..|+.++..+ +|+||+++++++...+..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 56788999999999999874 358899999986432 12235688899999999 5999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999986 4456999999999999999999999999 999999999999999999999999998764322
Q ss_pred -----CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 -----KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....||+.|+|||.+.+. .++.++|||||||++|||+||+.||...............+.. ....++...+.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 236 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIGP 236 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCH
Confidence 235689999999999864 4788999999999999999999988532111000000000110 11233445678
Q ss_pred HHHHHHHHhccCCCCCCC-----CHHHHHHHh
Q 011349 281 ELVRLASRCLQYEPRERP-----NAKSLVASL 307 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rp-----s~~~il~~l 307 (488)
.+.+++.+||..||++|| +++++++|-
T Consensus 237 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 237 EAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 899999999999999999 788998873
No 85
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.7e-42 Score=343.28 Aligned_cols=247 Identities=16% Similarity=0.102 Sum_probs=195.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||+||+|.. .+++.||||+++.... .....+.+|+.++..++|+||+++++.+.+....++|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 356788899999999999984 5688999999975321 223468889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 82 FLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999997 4567999999999999999999999999 999999999999999999999999998753211
Q ss_pred -----------------------------------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCc
Q 011349 207 -----------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 251 (488)
Q Consensus 207 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~ 251 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 124689999999999998999999999999999999999999865
Q ss_pred chhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc--CCCCCCCCHHHHHHH
Q 011349 252 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ--YEPRERPNAKSLVAS 306 (488)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dp~~Rps~~~il~~ 306 (488)
........... ..... ..-+.....++++.+++.+++. .++..||++++|++|
T Consensus 239 ~~~~~~~~~i~-~~~~~-~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQETYKKVM-NWKET-LIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHHHHHHHH-cCcCc-ccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 43221111100 00000 0000011245678888888654 233456899999998
No 86
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.9e-42 Score=345.52 Aligned_cols=246 Identities=18% Similarity=0.159 Sum_probs=196.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||+|. ..+++.||||++..... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 35788899999999999999 45688999999875321 123468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|++||+|.+++.+ ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 9999999999863 456899999999999999999999999 99999999999999999999999999752210
Q ss_pred ----------------------------------------------CCccccccCCCCccccccCCcccCCceEeehHHH
Q 011349 206 ----------------------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 239 (488)
Q Consensus 206 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il 239 (488)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 0123588999999999998999999999999999
Q ss_pred HHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC---HHHHHHH
Q 011349 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN---AKSLVAS 306 (488)
Q Consensus 240 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~ 306 (488)
|||++|+.||............. . .......+.....++++.+++.+|+ .+|.+|++ +.+++.|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~-~-~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVI-N-WQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHH-c-cCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 99999999987542211111000 0 0011111112234677888998876 59999987 8888876
No 87
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.1e-42 Score=330.50 Aligned_cols=242 Identities=19% Similarity=0.252 Sum_probs=196.6
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||+|+||+||++.. .+++.||||++...... ..+.+..|+.+++.++|+||+++.+++..+...++||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999994 56889999998754322 234678899999999999999999999999999999999999999
Q ss_pred hhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccc
Q 011349 138 SKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYST 211 (488)
Q Consensus 138 ~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~ 211 (488)
...+... ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++...... ....|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 8877431 3456999999999999999999999999 999999999999999999999999998765432 23467
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||.+.+..++.++|||||||++|||++|+.||................... ...++...+..+.+++.+||+
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~ 237 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLA 237 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999886432111000001111111 112344567889999999999
Q ss_pred CCCCCCC-----CHHHHHHH
Q 011349 292 YEPRERP-----NAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rp-----s~~~il~~ 306 (488)
.||++|| +++++++|
T Consensus 238 ~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 238 KDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHhcCCCCCCHHHHhcC
Confidence 9999999 77888876
No 88
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.9e-42 Score=335.12 Aligned_cols=237 Identities=20% Similarity=0.288 Sum_probs=193.5
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++..++..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999995 568889999997542 12334566777777655 7999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 82 DLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 9999886 3456999999999999999999999999 99999999999999999999999999875432 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||........... +.. ....++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~--~~~~~~~~~~~~~~~ll~~~l~ 232 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS----ILN--DRPHFPRWISKEAKDCLSKLFE 232 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHc--CCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999998875432221111 111 1123344567789999999999
Q ss_pred CCCCCCCCHH-HHHHH
Q 011349 292 YEPRERPNAK-SLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~-~il~~ 306 (488)
.+|.+||++. +++++
T Consensus 233 ~~P~~R~~~~~~l~~h 248 (316)
T cd05592 233 RDPTKRLGVDGDIRQH 248 (316)
T ss_pred CCHHHcCCChHHHHcC
Confidence 9999999875 56554
No 89
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.4e-42 Score=337.59 Aligned_cols=241 Identities=17% Similarity=0.246 Sum_probs=195.9
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++.... .....+.+|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 579999999999994 5688999999975432 2234688999999999 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|.+++. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 9998886 3467999999999999999999999999 99999999999999999999999999875321 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----ccccccccccCCCCChhhHHHHHHHH
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----NFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
|+.|+|||++.+..++.++|||||||++|||+||+.||........... ....+... ....+...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li 236 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHHH
Confidence 9999999999998999999999999999999999998853211100000 00011111 1123445667899999
Q ss_pred HHhccCCCCCCCC------HHHHHHH
Q 011349 287 SRCLQYEPRERPN------AKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps------~~~il~~ 306 (488)
.+||..||.+||+ +.++++|
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 237 KGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999987 6788776
No 90
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.2e-42 Score=331.25 Aligned_cols=248 Identities=18% Similarity=0.210 Sum_probs=203.1
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
|++++.||+|+||.||++.. .+++.||||++...... ....+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 45678889999999999994 56899999998754322 234578899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---c
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---S 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~ 208 (488)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 99999998886544457999999999999999999999999 9999999999999999999999999988654332 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..|++.|+|||++.+..++.++|||||||++|||++|..||......... ..+...+.. ....++...+..+.+|+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVKE-DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHHHHHhhh-cccccCcccCHHHHHHHHH
Confidence 46789999999999888999999999999999999999988653221110 011111111 1122344567789999999
Q ss_pred hccCCCCCCC-----CHHHHHHH
Q 011349 289 CLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rp-----s~~~il~~ 306 (488)
||..||.+|| ++.+++.+
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999 88899887
No 91
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.2e-42 Score=338.28 Aligned_cols=238 Identities=20% Similarity=0.222 Sum_probs=196.4
Q ss_pred ccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 60 SEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.||+|+||.||++.. .+|+.||||++..... .....+.+|++++++++||||+++++++..++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5689999999999874 3588999999975432 223467889999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
+|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 999999986 3456999999999999999999999999 999999999999999999999999998765433 235
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.||+.|+|||.+.+..++.++|||||||++|||+||+.||........... +... ....+...++.+.+++.+|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~li~~~ 232 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM----ILKA--KLGMPQFLSPEAQSLLRAL 232 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHHHH
Confidence 689999999999988899999999999999999999998865432211111 1111 1123445578899999999
Q ss_pred ccCCCCCCCC-----HHHHHHH
Q 011349 290 LQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps-----~~~il~~ 306 (488)
|+.||++||+ +.+++.+
T Consensus 233 l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 233 FKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred hhcCHhHcCCCCCCCHHHHhCC
Confidence 9999999999 4556554
No 92
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.3e-42 Score=324.16 Aligned_cols=247 Identities=23% Similarity=0.319 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.++++++||+|+||.||+|...+++.||+|.+.... .....+.+|+.++++++|+||+++++++ ..+..++||||+++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~ 84 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMEN 84 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCC
Confidence 457889999999999999998888999999997654 3456899999999999999999999886 45678999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++....+..+++.++..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05067 85 GSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGA 163 (260)
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCC
Confidence 99999987555567999999999999999999999999 9999999999999999999999999987654221 22
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||++.+..++.++||||||+++|||++ |+.|+......... ..+........+...+.++.+++.+
T Consensus 164 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05067 164 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVI-----QNLERGYRMPRPDNCPEELYELMRL 238 (260)
T ss_pred cccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHH-----HHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 34678999999998889999999999999999999 88877544222111 1111111222334456789999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|++||++++++..|+.
T Consensus 239 ~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 239 CWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HccCChhhCCCHHHHHHHhhc
Confidence 999999999999999999874
No 93
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-42 Score=354.63 Aligned_cols=247 Identities=17% Similarity=0.185 Sum_probs=203.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CC-CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DE-DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+.+.||+|+||.||+|.. .+ +..||+|.+..........+.+|+.+|+.++|||||++++++..++..+|||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 3478888999999999999983 34 677999987655433345678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 132 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
++||+|.+++... ...++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999999887532 3457899999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||........... .... .....+...+.++.
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~----~~~~-~~~~~~~~~s~~~~ 300 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQ----VLYG-KYDPFPCPVSSGMK 300 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC-CCCCCCccCCHHHH
Confidence 234689999999999988999999999999999999999998865422111111 1111 11123344567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||..+|++||++.+++.+
T Consensus 301 ~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 301 ALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHhccChhhCcCHHHHHhC
Confidence 99999999999999999999864
No 94
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.1e-42 Score=337.57 Aligned_cols=253 Identities=21% Similarity=0.310 Sum_probs=201.2
Q ss_pred cccccccCCCCCCceEEEEEe-C-----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecC-Cee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-D-----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEG-EER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~~~ 125 (488)
.+++.+.||+|+||.||+|.. . +++.||+|+++..... ..+.+.+|+.++.++ +|+||++++++|... ...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 467888999999999999963 2 2478999999754322 234678899999999 799999999988654 568
Q ss_pred eEEEecCCCCChhhhhccCC-----------------------------------------------------------C
Q 011349 126 LLVAEFMPNETLSKHLFHWE-----------------------------------------------------------N 146 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~-----------------------------------------------------------~ 146 (488)
++||||+++++|.+++.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999885321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC------CccccccCCCCccc
Q 011349 147 QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEY 220 (488)
Q Consensus 147 ~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~ 220 (488)
.++++..+..++.||+.||.|||+.+ |+||||||+|||+++++.++|+|||+++..... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 36899999999999999999999999 999999999999999999999999999865322 12344678999999
Q ss_pred cccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC
Q 011349 221 LRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299 (488)
Q Consensus 221 ~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 299 (488)
+.+..++.++|||||||++|||++ |..||........ +...+........+...++++.+++.+||+.+|++||+
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE----FCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH----HHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 999999999999999999999998 8877754211110 11111111112223345678999999999999999999
Q ss_pred HHHHHHHhchhhc
Q 011349 300 AKSLVASLTPLQK 312 (488)
Q Consensus 300 ~~~il~~l~~~~~ 312 (488)
+.+++++|+.+..
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
No 95
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.7e-42 Score=337.09 Aligned_cols=241 Identities=17% Similarity=0.240 Sum_probs=195.2
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 579999999999994 5688999999976432 2234678899998877 7999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 9998886 3457999999999999999999999999 99999999999999999999999999875322 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc----c-ccccccccCCCCChhhHHHHHHHH
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN----F-LMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
|+.|+|||++.+..++.++|||||||++|||+||+.||............ . ..+.. ....++...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~ll 236 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999987531110000000 0 00111 11234455678899999
Q ss_pred HHhccCCCCCCCC------HHHHHHH
Q 011349 287 SRCLQYEPRERPN------AKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps------~~~il~~ 306 (488)
.+||..||.+||+ +.++++|
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 237 KSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999998 4677776
No 96
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.8e-42 Score=345.10 Aligned_cols=245 Identities=18% Similarity=0.139 Sum_probs=197.1
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||++. ..+++.||||++.... ....+.+.+|++++..++||||+++++++.++...|+|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 35778899999999999998 4578999999986432 1223568889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++||+|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 82 FLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999986 3467899999999999999999999999 999999999999999999999999998632110
Q ss_pred -----------------------------------------------CccccccCCCCccccccCCcccCCceEeehHHH
Q 011349 207 -----------------------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 239 (488)
Q Consensus 207 -----------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il 239 (488)
....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 023589999999999988999999999999999
Q ss_pred HHHhhCCCCCCcchhhhhhccccccccccccCCCCC--hhhHHHHHHHHHHhccCCCCCC---CCHHHHHHHh
Q 011349 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS--NDDGTELVRLASRCLQYEPRER---PNAKSLVASL 307 (488)
Q Consensus 240 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~R---ps~~~il~~l 307 (488)
|||+||..||.......... .+........++ ...+.++.+++.+||. +|.+| +++.+++.|-
T Consensus 239 ~elltG~~Pf~~~~~~~~~~----~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp 306 (377)
T cd05629 239 FECLIGWPPFCSENSHETYR----KIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP 306 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHH----HHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence 99999999886542211100 011000001111 1346789999999997 66665 5999999883
No 97
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.4e-42 Score=328.28 Aligned_cols=248 Identities=22% Similarity=0.315 Sum_probs=203.1
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+++.||+|+||.||+|... ++..||||.++..... ..+.+.+|+++++.++|+||+++++++......++
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 85 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIM 85 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEE
Confidence 3567788999999999999853 2478999999765533 34689999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeec
Q 011349 128 VAEFMPNETLSKHLFHWE------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 195 (488)
||||+++++|.+++.... ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~ 164 (280)
T cd05049 86 VFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEEC
Confidence 999999999999986421 245889999999999999999999999 9999999999999999999999
Q ss_pred cCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccccc
Q 011349 196 CFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 196 Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 268 (488)
|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++ |..|+.......... .+..
T Consensus 165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~-----~~~~ 239 (280)
T cd05049 165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE-----CITQ 239 (280)
T ss_pred CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHHc
Confidence 99998754322 12234678999999999999999999999999999999 888875432221111 1111
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
......+...+..+.+++.+||..||++||++.++++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 240 GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1112223456788999999999999999999999999875
No 98
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.9e-42 Score=336.49 Aligned_cols=242 Identities=20% Similarity=0.259 Sum_probs=198.2
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCC-CCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRS-ERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 130 (488)
+.+++.||+|+||.||+|.. .+++.||||++.... ....+.+..|+.++..++| ++|+++++++...+..|+|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 57788999999999999994 457889999987542 2234568889999999976 458889999988899999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----C
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----G 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 206 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 82 ~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05587 82 YVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTT 158 (324)
T ss_pred CCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCce
Confidence 999999999886 3456899999999999999999999999 99999999999999999999999999875321 1
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+.. ....++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~----~i~~--~~~~~~~~~~~~~~~li 232 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ----SIME--HNVSYPKSLSKEAVSIC 232 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH----HHHc--CCCCCCCCCCHHHHHHH
Confidence 23468999999999999899999999999999999999999886543221111 1111 11233445677899999
Q ss_pred HHhccCCCCCCCCH-----HHHHHH
Q 011349 287 SRCLQYEPRERPNA-----KSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~-----~~il~~ 306 (488)
.+||..||.+|++. .++++|
T Consensus 233 ~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 233 KGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 99999999999976 677665
No 99
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4e-42 Score=337.82 Aligned_cols=195 Identities=18% Similarity=0.204 Sum_probs=174.6
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-C-----CCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-S-----ERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~l 127 (488)
.|.|++.||+|+||.|.+|. ..+++.||||+++... .-..+...|+.+|..|+ | -|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 55778999999999999999 6779999999998654 33457788999999997 4 489999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC--CCCeeccCCCcccCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD--GNPRLSCFGLMKNSRD 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~--~~~kl~Dfgla~~~~~ 205 (488)
|+|.+. -+|.++|+...-..|+...+..|+.||+.||.+||+.+ |||+||||+||||.+- ..+||+|||.+.....
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 999995 89999999877788999999999999999999999999 9999999999999643 4799999999987655
Q ss_pred CC-ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcc
Q 011349 206 GK-SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH 252 (488)
Q Consensus 206 ~~-~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~ 252 (488)
.- ++..+..|+|||++.|.+|+.+.||||||||++||+||.+.|++.
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 43 566789999999999999999999999999999999999888875
No 100
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-42 Score=319.93 Aligned_cols=250 Identities=19% Similarity=0.205 Sum_probs=210.4
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+++..++++.||.|.-|+||++... ++..+|+|++.+..... ..+.+.|-+||+.++||.++.+|..|..+...|+
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL 154 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence 4556688999999999999999954 46889999998665332 3467889999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC---
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR--- 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 204 (488)
|||||+||+|..+.++..+..|++..+..++.+|+-||.|||-.| ||+|||||+||||-++|++-|+||.|+....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 999999999999998888889999999999999999999999999 9999999999999999999999999853210
Q ss_pred ---------------------------------C------------------------CCccccccCCCCccccccCCcc
Q 011349 205 ---------------------------------D------------------------GKSYSTNLAFTPPEYLRTGRVI 227 (488)
Q Consensus 205 ---------------------------------~------------------------~~~~~~t~~y~aPE~~~~~~~~ 227 (488)
. ..+++||-.|+|||++.|..-+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0124578899999999999999
Q ss_pred cCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC----HHHH
Q 011349 228 PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN----AKSL 303 (488)
Q Consensus 228 ~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~i 303 (488)
.++|.|+|||++|||+.|..||.+.... ..+..++...+.-+-.+..+..+.+||.++|.+||.+|.. +.||
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~----~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNK----ETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCch----hhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 9999999999999999999999876332 2333333333322222356788999999999999999987 8888
Q ss_pred HHH
Q 011349 304 VAS 306 (488)
Q Consensus 304 l~~ 306 (488)
-+|
T Consensus 390 K~H 392 (459)
T KOG0610|consen 390 KRH 392 (459)
T ss_pred hcC
Confidence 776
No 101
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.2e-42 Score=329.03 Aligned_cols=251 Identities=20% Similarity=0.261 Sum_probs=202.9
Q ss_pred CCcccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
++.++++++||+|+||.||+|... .+..||||+++...... .+.+.+|+.++..++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 345677889999999999999842 24779999998554222 35688999999999999999999999999999
Q ss_pred eEEEecCCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 126 LLVAEFMPNETLSKHLFHW--------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++++||+.+++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCc
Confidence 9999999999999988521 1235889999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++...... ...+++.|+|||.+.++.++.++|||||||++|||+| |..|+....... ...
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~ 237 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD-----VIE 237 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHH
Confidence 9999999987654322 2234678999999988889999999999999999998 665654432211 111
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
.+........+..++..+.+++.+||+.+|.+||++.+|+..|+.
T Consensus 238 ~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111111223455677889999999999999999999999999874
No 102
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.7e-42 Score=328.82 Aligned_cols=250 Identities=22% Similarity=0.255 Sum_probs=194.7
Q ss_pred cccccccCCCCCCceEEEEEe-C-CCcEEEEEEccCCCCC--ChHHHHHHHHHHhhc---CCCCCcccccceec-----C
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-D-EDRWIAVKRFNRSAWP--DSRQFLEEARAVGLL---RSERLVNLIGCCCE-----G 122 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~~~~~~~~-----~ 122 (488)
.|.+++.||+|+||.||+|.. . +++.||||+++..... ....+.+|+.+++.+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 467888999999999999985 3 4678999998754322 234567788877766 69999999998852 4
Q ss_pred CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
...++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 56899999996 69999887545566999999999999999999999999 99999999999999999999999999876
Q ss_pred CCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------cccc---c
Q 011349 203 SRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFLM---L 265 (488)
Q Consensus 203 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~~~~---~ 265 (488)
.... ....+|+.|+|||.+.+..++.++|||||||++|||++|++||........... .+.. .
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 239 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence 5432 244678999999999888899999999999999999999988865422110000 0000 0
Q ss_pred cccccC-------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 MDSCLE-------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... .......+..+.+++.+||+.||++|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000000 00112345778999999999999999999999975
No 103
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.6e-42 Score=340.19 Aligned_cols=246 Identities=20% Similarity=0.193 Sum_probs=199.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
-..|.+++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 34678889999999999999995 468899999986422 12344688999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||++||+|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 122 ~Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 122 MEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred EcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence 99999999999985 345899999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccccCCCCccccccC----CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC--hh
Q 011349 207 ---KSYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS--ND 277 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 277 (488)
....||+.|+|||++.+. .++.++|||||||++|||+||+.||........ ...+........++ ..
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~ 273 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT----YSKIMDHKNSLNFPEDVE 273 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCcccCCCCccc
Confidence 245689999999999753 378899999999999999999999875432111 11111111111122 23
Q ss_pred hHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRE--RPNAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~--Rps~~~il~~ 306 (488)
.+..+.+++.+||..+|.+ |+++.++++|
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 4678899999999855543 8999999998
No 104
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.1e-42 Score=334.04 Aligned_cols=237 Identities=19% Similarity=0.251 Sum_probs=194.4
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+|..||||+++... ......+..|..++... +||||+++++++.+.+..++||||+.||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 579999999999995 468899999997542 12345677788888765 8999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||+++.... .....|
T Consensus 82 ~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05620 82 DLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG 158 (316)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence 9999886 3456899999999999999999999999 99999999999999999999999999874321 234568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||............ .. ....++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI----RV--DTPHYPRWITKESKDILEKLFE 232 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----Hh--CCCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999998654332211110 00 1122333456789999999999
Q ss_pred CCCCCCCCHH-HHHHH
Q 011349 292 YEPRERPNAK-SLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~-~il~~ 306 (488)
.||++||++. +++.|
T Consensus 233 ~dP~~R~~~~~~~~~h 248 (316)
T cd05620 233 RDPTRRLGVVGNIRGH 248 (316)
T ss_pred CCHHHcCCChHHHHcC
Confidence 9999999984 66654
No 105
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.2e-42 Score=323.78 Aligned_cols=251 Identities=18% Similarity=0.153 Sum_probs=202.5
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..++.+++.||+|+||.||+|.. .+++.||+|++..........+.+|+.++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 34578889999999999999994 57889999999765544556788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+++++|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...... .
T Consensus 88 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 88 CGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 99999999886 3457899999999999999999999999 999999999999999999999999998865422 2
Q ss_pred ccccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 SYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...+++.|+|||.+. ...++.++|||||||++|||++|+.|+.................... ........+..+.+
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 243 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPP-KLKDKTKWSSTFHN 243 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCC-CCccccccCHHHHH
Confidence 346788999999884 34578899999999999999999987743311100000000000000 00112234678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+||..+|++|||+++++++|
T Consensus 244 li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 244 FVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHhhCChhhCcCHHHHhcCC
Confidence 99999999999999999999875
No 106
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.3e-42 Score=338.40 Aligned_cols=247 Identities=21% Similarity=0.321 Sum_probs=194.5
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC-----CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 127 (488)
|.+.+.||+|+||.||+|. ..++..||||+++... ......+.+|+.+++.++||||+++++++... ...++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 5678889999999999999 4578999999987432 22345688999999999999999999987543 24799
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 82 VFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred EEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 999995 78998886 4456999999999999999999999999 999999999999999999999999999754321
Q ss_pred ------CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh-------------------hc
Q 011349 207 ------KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-------------------RG 259 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~-------------------~~ 259 (488)
....+|+.|+|||++.+ ..++.++|||||||++|||+||++||........ ..
T Consensus 158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 237 (338)
T cd07859 158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRN 237 (338)
T ss_pred CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 23468899999999876 6789999999999999999999988865321100 00
Q ss_pred cccccccc---cccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 KNFLMLMD---SCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 ~~~~~~~~---~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......+. ......+ .+..++.+.+++.+||..||++|||++++++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000 0000000 01245678999999999999999999999987
No 107
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-44 Score=309.08 Aligned_cols=247 Identities=21% Similarity=0.222 Sum_probs=203.9
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+-++||+|.|++||++. ..+|+.+|+|+++... ..+.+++.+|+++.+.|+|||||++.+........|+|+|+|
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m 92 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 92 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence 3555678999999999998 5679999999987543 235678999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec---CCCCCeeccCCCcccCCCCC--
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~~-- 207 (488)
.|++|..-|. .+-.+++..+-..+.||+++|.|+|.++ |||||+||.|+|+. ....+||+|||+|.....+.
T Consensus 93 ~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~ 169 (355)
T KOG0033|consen 93 TGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW 169 (355)
T ss_pred cchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence 9999987665 3355788899999999999999999999 99999999999995 33468999999999887543
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...|||+|||||++...+|+..+|||+.||+||-|+.|.+||++.....+-.+......+ ..++.-+.++++..+|+
T Consensus 170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd--~~~~~w~~is~~Ak~Lv 247 (355)
T KOG0033|consen 170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD--YPSPEWDTVTPEAKSLI 247 (355)
T ss_pred ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC--CCCcccCcCCHHHHHHH
Confidence 457899999999999999999999999999999999999999885433322222111111 11112224567899999
Q ss_pred HHhccCCCCCCCCHHHHHHHh
Q 011349 287 SRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l 307 (488)
.+||..||.+|.|+.|.|+|-
T Consensus 248 rrML~~dP~kRIta~EAL~Hp 268 (355)
T KOG0033|consen 248 RRMLTVNPKKRITADEALKHP 268 (355)
T ss_pred HHHhccChhhhccHHHHhCCc
Confidence 999999999999999999873
No 108
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.5e-42 Score=334.98 Aligned_cols=242 Identities=19% Similarity=0.264 Sum_probs=198.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+++++.||+|+||.||+|.. .+++.||||+++.... .....+..|..++..+ +|++|+++++++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 46788899999999999995 4578999999875432 2234567788888887 58999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----C
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----G 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 206 (488)
|+++|+|.+.+. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 82 ~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 82 YVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTT 158 (323)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcc
Confidence 999999999886 3456999999999999999999999999 99999999999999999999999999875432 2
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+... ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~s~~~~~li 232 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ----SIMEH--NVAYPKSMSKEAVAIC 232 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH----HHHhC--CCCCCCcCCHHHHHHH
Confidence 24568999999999999999999999999999999999999886543222111 11111 1223445678899999
Q ss_pred HHhccCCCCCCCCH-----HHHHHH
Q 011349 287 SRCLQYEPRERPNA-----KSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~-----~~il~~ 306 (488)
.+||+.+|.+|++. .+++.|
T Consensus 233 ~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 233 KGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHcccCHHhcCCCCCCCHHHHhcC
Confidence 99999999999974 666655
No 109
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9e-42 Score=321.80 Aligned_cols=245 Identities=24% Similarity=0.323 Sum_probs=200.9
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++.+.+.||+|+||.||+|.+.++..+|||++.... .....+.+|+.+++.++||||+++++++...+..++||||++|
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 356778899999999999998777789999987543 2346788999999999999999999999988999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-----c
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-----Y 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-----~ 209 (488)
++|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||+++...+... .
T Consensus 84 ~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 161 (256)
T cd05059 84 GCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGT 161 (256)
T ss_pred CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccccCCC
Confidence 9999998642 346899999999999999999999999 99999999999999999999999999876543221 1
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||.+.+..++.++||||||+++|||+| |..|+......... ..+........+...+.++.+++.+
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05059 162 KFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-----ESVSAGYRLYRPKLAPTEVYTIMYS 236 (256)
T ss_pred CCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH-----HHHHcCCcCCCCCCCCHHHHHHHHH
Confidence 22357999999998889999999999999999999 67666433211111 1111111222334467889999999
Q ss_pred hccCCCCCCCCHHHHHHHh
Q 011349 289 CLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l 307 (488)
||..+|++|||+.++++.|
T Consensus 237 cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 237 CWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HhcCChhhCcCHHHHHHHh
Confidence 9999999999999999886
No 110
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.3e-41 Score=321.42 Aligned_cols=247 Identities=25% Similarity=0.343 Sum_probs=203.4
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.++++++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+|++++++++. ....++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 4577889999999999999987888899999976543 4567999999999999999999999874 5668999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++.......+++.++..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05070 85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence 99999987544556899999999999999999999999 9999999999999999999999999987654322 12
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||.+.+..++.++||||||+++|+|++ |..|+........ ...+........+...+..+.+++.+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05070 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV-----LEQVERGYRMPCPQDCPISLHELMLQ 238 (260)
T ss_pred CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 34567999999988889999999999999999999 7777654321111 11111112223344567889999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|++|||+.++.+.|+.
T Consensus 239 ~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 239 CWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999998864
No 111
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.2e-42 Score=326.69 Aligned_cols=243 Identities=17% Similarity=0.219 Sum_probs=194.6
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||+|+||.||++.. .+|+.||+|++...... ....+..|++++++++||||+++++++..+...++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999994 56899999998643211 234566799999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---ccccccC
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---SYSTNLA 214 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~~~~t~~ 214 (488)
.+++.......+++..+..++.||+.||.|||+.+ ++||||||+||++++++.++|+|||++....... ...++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 98886545556899999999999999999999999 9999999999999999999999999987654432 3467899
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|+|||++.+..++.++|||||||++|||++|+.|+...................... ......+.++.+++.+||+.||
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P 238 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKP 238 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCH
Confidence 999999998889999999999999999999998876432111100000111111111 0112356789999999999999
Q ss_pred CCCCCHHHHHHH
Q 011349 295 RERPNAKSLVAS 306 (488)
Q Consensus 295 ~~Rps~~~il~~ 306 (488)
++||++.++++.
T Consensus 239 ~~R~~~~~~~~~ 250 (277)
T cd05607 239 EDRLGSREKNDD 250 (277)
T ss_pred hhCCCCccchhh
Confidence 999999766544
No 112
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=8.5e-42 Score=328.25 Aligned_cols=253 Identities=22% Similarity=0.291 Sum_probs=206.1
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++.+.+.||+|+||.||+|... ++..|++|.+........+.+.+|+.++++++|+||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 3466788999999999999732 3456999998766544456799999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCee
Q 011349 129 AEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 194 (488)
|||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+||+++.++.++|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l 164 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKI 164 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEE
Confidence 99999999999986421 234899999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccc
Q 011349 195 SCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMD 267 (488)
Q Consensus 195 ~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 267 (488)
+|||++...... ....++..|+|||++.+..++.++|||||||++|||+| |..|+.......... .+.
T Consensus 165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-----~~~ 239 (291)
T cd05094 165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE-----CIT 239 (291)
T ss_pred CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHh
Confidence 999998755332 22345678999999998889999999999999999999 887764432211110 011
Q ss_pred cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 268 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.......+...+..+.+++.+||+.+|.+|||+.++++.|+.+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 240 QGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111122334567899999999999999999999999999998764
No 113
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.9e-42 Score=340.79 Aligned_cols=243 Identities=16% Similarity=0.184 Sum_probs=195.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..|.+++.||+|+||.||++. ..+++.||||... ...+.+|++++++++||||+++++++..+...++|||++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 457899999999999999999 4578899999754 245789999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----CC
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-----GK 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-----~~ 207 (488)
. ++|..++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 166 ~-~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 166 K-TDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred C-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence 5 78888886 3456899999999999999999999999 99999999999999999999999999875322 12
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh--------hh----h--c-----------ccc
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD--------LI----R--G-----------KNF 262 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~--------~~----~--~-----------~~~ 262 (488)
...||+.|+|||++.+..++.++|||||||++|||+||..|+...... .. . + ...
T Consensus 242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~ 321 (391)
T PHA03212 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL 321 (391)
T ss_pred cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence 357899999999999889999999999999999999999776432100 00 0 0 000
Q ss_pred cccc----cccc-----CCCC--ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLM----DSCL-----EGHF--SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~----~~~~-----~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... .... +..+ ....+.++.+|+.+||+.||.+|||+.+++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000 0000 0000 01246689999999999999999999999986
No 114
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.7e-41 Score=321.89 Aligned_cols=248 Identities=21% Similarity=0.285 Sum_probs=202.6
Q ss_pred ccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+.+.+.||+|+||.||+|.+.. ...||||.++..... ....|.+|+.++++++||||+++++.+...+..++|||
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 85 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE 85 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence 4567788999999999998642 457999998765422 24578899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||+++......
T Consensus 86 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (266)
T cd05033 86 YMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY 163 (266)
T ss_pred cCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence 9999999999864 2347899999999999999999999999 9999999999999999999999999998764211
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+......... ..+......+.+...+..+.
T Consensus 164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~ 238 (266)
T cd05033 164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVI-----KAVEDGYRLPPPMDCPSALY 238 (266)
T ss_pred eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHH
Confidence 1233568999999998889999999999999999998 88776543222111 11111112223345678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+++.+||+.+|++||++.+++++|..+
T Consensus 239 ~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 239 QLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999999865
No 115
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.1e-42 Score=333.23 Aligned_cols=237 Identities=19% Similarity=0.275 Sum_probs=196.6
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++... ......+.+|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999995 458889999997542 22345677899999888 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++.++..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 82 DLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 9998886 3457999999999999999999999999 99999999999999999999999999875322 123468
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........... +... ...++...+..+.+++.+||.
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~~~l~ 232 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS----ILED--EVRYPRWLSKEAKSILKSFLT 232 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHH----HHcC--CCCCCCcCCHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999998865432211111 1110 112334457889999999999
Q ss_pred CCCCCCCCH-----HHHHHH
Q 011349 292 YEPRERPNA-----KSLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~-----~~il~~ 306 (488)
.||.+||++ .+++.+
T Consensus 233 ~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 233 KNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCHHHcCCCCCCCHHHHhcC
Confidence 999999999 888876
No 116
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.1e-42 Score=332.71 Aligned_cols=237 Identities=20% Similarity=0.260 Sum_probs=193.8
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++... ......+..|..++... +||||+++++++.+.+..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 579999999999995 458899999997542 12345567788888765 8999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|.+++. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 82 DLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence 9999986 3456899999999999999999999999 99999999999999999999999999875322 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||........... +.. ....++...+.++.+++.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~-----i~~-~~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS-----IRM-DNPCYPRWLTREAKDILVKLFV 232 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH-----HHh-CCCCCCccCCHHHHHHHHHHhc
Confidence 9999999999988999999999999999999999998865432211110 000 0112333456789999999999
Q ss_pred CCCCCCCCHH-HHHHH
Q 011349 292 YEPRERPNAK-SLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~-~il~~ 306 (488)
.||.+||++. +++.+
T Consensus 233 ~~P~~R~~~~~~l~~h 248 (316)
T cd05619 233 REPERRLGVKGDIRQH 248 (316)
T ss_pred cCHhhcCCChHHHHcC
Confidence 9999999997 66554
No 117
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=6.8e-42 Score=333.75 Aligned_cols=237 Identities=20% Similarity=0.237 Sum_probs=191.8
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHH-HHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEAR-AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+|+.||||++..... .....+..|.. +++.++||||+++++++...+..++||||++||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 579999999999995 5689999999875321 12334555555 467889999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 9999886 4567999999999999999999999999 99999999999999999999999999875322 223468
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|..||........... +.... ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~----i~~~~--~~~~~~~~~~~~~li~~~l~ 232 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDN----ILNKP--LRLKPNISVSARHLLEGLLQ 232 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHH----HHcCC--CCCCCCCCHHHHHHHHHHhh
Confidence 9999999999998999999999999999999999998865432221111 11111 11233456789999999999
Q ss_pred CCCCCCCCHH----HHHHH
Q 011349 292 YEPRERPNAK----SLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~----~il~~ 306 (488)
.||.+||++. +++.+
T Consensus 233 ~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred cCHHhCCCCCCCHHHHHcC
Confidence 9999999884 66554
No 118
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.8e-41 Score=320.95 Aligned_cols=248 Identities=24% Similarity=0.312 Sum_probs=202.1
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.++||+|+||.||+|...++..||||+++... ...+.+.+|+.++++++||||+++++++. ....++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (262)
T cd05071 7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSK 84 (262)
T ss_pred HeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCC
Confidence 467889999999999999997666679999997543 24567899999999999999999999874 4568999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++...... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~ 163 (262)
T cd05071 85 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 163 (262)
T ss_pred CcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccccCC
Confidence 99999997544456899999999999999999999999 9999999999999999999999999987654322 22
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||+..+..++.++|||||||++|||+| |..|+.......... ..........+...+..+.+++.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~ 238 (262)
T cd05071 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-----QVERGYRMPCPPECPESLHDLMCQ 238 (262)
T ss_pred cccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHH-----HHhcCCCCCCccccCHHHHHHHHH
Confidence 34567999999988889999999999999999999 666654432211111 011111112334567889999999
Q ss_pred hccCCCCCCCCHHHHHHHhchh
Q 011349 289 CLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~ 310 (488)
||+.+|++||++.++++.|+..
T Consensus 239 ~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 239 CWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HccCCcccCCCHHHHHHHHHHh
Confidence 9999999999999999998754
No 119
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8.8e-42 Score=327.63 Aligned_cols=252 Identities=23% Similarity=0.292 Sum_probs=204.3
Q ss_pred ccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+.+.||+|+||.||++.. .++..+|+|.+..........+.+|+.++++++||||+++++++...+..++||
T Consensus 7 ~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 86 (288)
T cd05093 7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVF 86 (288)
T ss_pred eeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 46778889999999999974 234568999987655344567999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCC
Q 011349 130 EFMPNETLSKHLFHWE-----------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 198 (488)
||+++++|.+++.... ...+++.+++.++.|++.||.|||+.+ ++||||||+||++++++.++|+|||
T Consensus 87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg 165 (288)
T cd05093 87 EYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFG 165 (288)
T ss_pred EcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccCC
Confidence 9999999999986321 235899999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccC
Q 011349 199 LMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 199 la~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
+++...... ...++..|+|||++.+..++.++|||||||++|+|+| |..|+........... +. ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~----i~-~~~~ 240 (288)
T cd05093 166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC----IT-QGRV 240 (288)
T ss_pred ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HH-cCCc
Confidence 987653321 2234678999999998889999999999999999999 7777654322111110 00 0011
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
...+...+.++.+++.+||+.+|.+|||+.++++.|+.+.+.
T Consensus 241 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 241 LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 112234567899999999999999999999999999988865
No 120
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.3e-41 Score=320.63 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=203.0
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccccccee-cCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC-EGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~ 132 (488)
..+.+.+.||+|+||.||++.. .|..||+|.++... ..+.+.+|+.++++++|+|++++++++. .++..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 3567788899999999999986 47779999986543 3567899999999999999999999764 456789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-cccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-SYST 211 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-~~~~ 211 (488)
++++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||++++++.+||+|||+++...... ...+
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 161 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 161 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCCcc
Confidence 9999999997544456899999999999999999999999 9999999999999999999999999988654332 3344
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
+..|+|||++.+..++.++|||||||++|||++ |+.|+......... ..+........+..+++.+.+++.+||
T Consensus 162 ~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l 236 (256)
T cd05082 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-----PRVEKGYKMDAPDGCPPVVYDVMKQCW 236 (256)
T ss_pred ceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHhcCCCCCCCCCCCHHHHHHHHHHh
Confidence 668999999988889999999999999999998 88776543222111 111111122334456788999999999
Q ss_pred cCCCCCCCCHHHHHHHhchh
Q 011349 291 QYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l~~~ 310 (488)
..+|++|||+.++++.|+.+
T Consensus 237 ~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 237 HLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred cCChhhCcCHHHHHHHHhcC
Confidence 99999999999999998754
No 121
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.7e-41 Score=320.16 Aligned_cols=240 Identities=22% Similarity=0.277 Sum_probs=196.3
Q ss_pred cCCCCCCceEEEEEe---CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV---DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
+||+|+||.||+|.+ .++..||||+++..... ..+.+.+|+.+++.++||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 579999999999974 35788999998754322 2457899999999999999999999874 55779999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-------
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS------- 208 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------- 208 (488)
+|.+++. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 9999986 3456899999999999999999999999 99999999999999999999999999986543321
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+++.|+|||.+....++.++|||||||++|||+| |..||....... ....+........+...++++.+++.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE-----VTQMIESGERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 123478999999988889999999999999999998 887775432211 11112222223345556788999999
Q ss_pred HhccCCCCCCCCHHHHHHHhch
Q 011349 288 RCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~ 309 (488)
+||+.||++||++.+|...|+.
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhc
Confidence 9999999999999999998864
No 122
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.1e-41 Score=324.17 Aligned_cols=251 Identities=22% Similarity=0.322 Sum_probs=200.5
Q ss_pred cccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 128 (488)
.+++.||+|+||+||++.+ .++..||+|.++.... .....+.+|+++++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 5778899999999988652 3577899999976542 2345788999999999999999999987653 358999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++++|.+++. ...+++.++..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++......
T Consensus 87 ~e~~~~~~l~~~~~---~~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLP---KHKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 99999999999985 345999999999999999999999999 9999999999999999999999999988654322
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh---hhhc-------cccccccccccC
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD---LIRG-------KNFLMLMDSCLE 271 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~---~~~~-------~~~~~~~~~~~~ 271 (488)
...++..|+|||.+.+..++.++||||||+++|||+||..|+...... .... ............
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 123456799999998888999999999999999999999876432111 0000 001111111222
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
...+...+..+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 2334556789999999999999999999999999998764
No 123
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.4e-42 Score=336.26 Aligned_cols=247 Identities=17% Similarity=0.155 Sum_probs=199.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||++. ..+++.||||+++.... .....+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 35778889999999999999 45789999999975432 234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++||+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 82 YQPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 9999999999964 2357999999999999999999999999 9999999999999999999999999997654332
Q ss_pred --ccccccCCCCccccc------cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 208 --SYSTNLAFTPPEYLR------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~------~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
...||+.|+|||++. +..++.++|||||||++|||++|+.||........... +... ......+.....+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~-i~~~-~~~~~~~~~~~~~ 237 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNN-IMNF-QRFLKFPEDPKVS 237 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHH-HHcC-CCccCCCCCCCCC
Confidence 236789999999986 45678899999999999999999998865422111110 0000 0001111112356
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.+|+.+||. +|.+|||+.+++.|
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 789999999997 99999999999987
No 124
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3e-43 Score=313.08 Aligned_cols=241 Identities=17% Similarity=0.257 Sum_probs=208.3
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.++++||+|+||.||+|. .++|+.||||.+..+. +.+++.+|+.+|+++..|+||++||.+.....+++|||||--|
T Consensus 36 Di~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 36 DIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence 567899999999999999 5679999999987654 6789999999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~ 211 (488)
++.++++- ++.+|++.++..+++..++||+|||... -||||||..|||++-+|++||+|||++....+. .+..|
T Consensus 114 SiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIG 191 (502)
T KOG0574|consen 114 SISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIG 191 (502)
T ss_pred cHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcccc
Confidence 99998864 6778999999999999999999999998 899999999999999999999999999876553 46789
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC--CChhhHHHHHHHHHHh
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FSNDDGTELVRLASRC 289 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~c 289 (488)
|+.|||||++..-.|+.++||||||++..||..|++|+... ......-+++....+. -|...+.++.+++..|
T Consensus 192 TPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI-----HPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 192 TPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI-----HPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred CcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc-----cccceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 99999999999989999999999999999999999775432 1111111222222222 3456788999999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|.+.|++|-|+.++++|
T Consensus 267 LiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 267 LIKKPEERKTALRLCEH 283 (502)
T ss_pred hcCCHHHHHHHHHHhhh
Confidence 99999999999999987
No 125
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.7e-41 Score=319.20 Aligned_cols=241 Identities=24% Similarity=0.356 Sum_probs=196.2
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
.||+|+||.||+|.. .+++.||+|.+...... ....+.+|++++++++||||+++++++......++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 579999999999994 57889999988654322 2457999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc------cccc
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS------YSTN 212 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------~~~t 212 (488)
+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........ ...+
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 82 TFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 99863 3346899999999999999999999999 99999999999999999999999999876443211 1223
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
..|+|||.+.++.++.++|||||||++|||++ |..|+....... ....+........+...+..+.+++.+||.
T Consensus 160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 234 (252)
T cd05084 160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-----TREAIEQGVRLPCPELCPDAVYRLMERCWE 234 (252)
T ss_pred eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-----HHHHHHcCCCCCCcccCCHHHHHHHHHHcC
Confidence 56999999998889999999999999999998 666553321111 111111112223444557889999999999
Q ss_pred CCCCCCCCHHHHHHHhc
Q 011349 292 YEPRERPNAKSLVASLT 308 (488)
Q Consensus 292 ~dp~~Rps~~~il~~l~ 308 (488)
.+|++|||+.++++.|.
T Consensus 235 ~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 235 YDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CChhhCcCHHHHHHHHh
Confidence 99999999999999875
No 126
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.3e-41 Score=321.02 Aligned_cols=253 Identities=16% Similarity=0.220 Sum_probs=206.0
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+.+.||+|+||.||+|. ..+++.||||.++.....+ ...+.+|+.+++.++||||+++++++...+..++|||
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence 45778889999999999999 4578999999886533222 3468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 131 FMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|+++++|.+++... ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 99999999888532 2355899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc-cCCCCChhhHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC-LEGHFSNDDGTELV 283 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 283 (488)
...+++.|+|||.+.+..++.++||||||+++|||++|+.|+.....+... ....+... .....+...+..+.
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS---LCQKIEQCDYPPLPTEHYSEKLR 238 (267)
T ss_pred HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH---HHHHHhcCCCCCCChhhcCHHHH
Confidence 346788999999998888999999999999999999999987543221111 01111111 11112234567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
+++.+||..+|++||++.++++.++.++
T Consensus 239 ~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 239 ELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 9999999999999999999999998764
No 127
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.1e-41 Score=325.65 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=202.1
Q ss_pred CCcccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
+....+.++||+|+||.||++... ++..||+|.+..........+.+|+++++.++|+||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 344567889999999999999632 35679999987655444568999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 127 LVAEFMPNETLSKHLFHWEN-------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
+||||+++++|.+++..... ..+++..+..++.||+.||.|||+.+ ++||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEE
Confidence 99999999999999864321 35899999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccc
Q 011349 194 LSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 194 l~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 266 (488)
|+|||++....... ...+++.|+|||.+.+..++.++|||||||++|||++ |.+|+........ . ...
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~----~-~~~ 237 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA----I-ECI 237 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH----H-HHH
Confidence 99999987543221 2234678999999998889999999999999999998 7776643221111 0 001
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
........+..+++.+.+++.+||+.||.+||++.+|++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 TQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111112233455678999999999999999999999999875
No 128
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-41 Score=327.46 Aligned_cols=252 Identities=18% Similarity=0.252 Sum_probs=208.4
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..++-...+.+++.||+|+||.||+|. ..+++.||+|.+........+.+.+|+.+++.++|+||+++++.+..+...+
T Consensus 14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~ 93 (296)
T cd06654 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 93 (296)
T ss_pred ccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 344445567888899999999999999 4568899999998766556678999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||++|++|.+++. ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 94 lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 94 VVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred EeecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 9999999999999984 346899999999999999999999999 999999999999999999999999998764432
Q ss_pred ----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 ----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||.......... ............+...+..+
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l 246 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAIF 246 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH---HHhcCCCCCCCCccccCHHH
Confidence 23467889999999998889999999999999999999999886542211100 00011111112233456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+||..+|++||++.+++.+
T Consensus 247 ~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 247 RDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHCcCCcccCcCHHHHhhC
Confidence 999999999999999999999986
No 129
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2e-41 Score=327.41 Aligned_cols=256 Identities=21% Similarity=0.260 Sum_probs=203.3
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCc--EEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDR--WIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
|+++.+.+.||+|+||.||+|.+. ++. .+|+|.++.... .....+.+|+.++.++ +||||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 455678888999999999999953 454 468887764332 2345788999999999 89999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 128 VAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
||||+++++|.+++.... ...+++.+++.++.||+.||.|||+.+ ++||||||+|||++.++.+|
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcEE
Confidence 999999999999986421 235889999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccc
Q 011349 194 LSCFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSC 269 (488)
Q Consensus 194 l~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 269 (488)
|+|||++...... .....+..|+|||.+.+..++.++|||||||++|||+| |..||......... ..+...
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~ 239 (303)
T cd05088 165 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-----EKLPQG 239 (303)
T ss_pred eCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH-----HHHhcC
Confidence 9999998643211 11223567999999988889999999999999999998 88776543221111 111111
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.....+...+..+.+|+.+||+.+|++||++.+++..|..+....
T Consensus 240 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 240 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 122233345678999999999999999999999999998876554
No 130
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3e-41 Score=320.22 Aligned_cols=255 Identities=16% Similarity=0.195 Sum_probs=207.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+.+.+.||.|+||.||+|. ..++..||||.+...... ....+.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 345778889999999999999 467899999988654322 2347889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 130 EFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||+++++|.+++... ....+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999988632 3456899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...++..|+|||.+.+..++.++||||||+++|+|++|..|+.....+...... .+.........+...+..+.
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--KIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh--hhhcCCCCCCCcccccHHHH
Confidence 346788999999998888999999999999999999999887543221111100 01011111111234567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
+++.+||..+|.+|||+.+|++.++++.
T Consensus 239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 239 QLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 9999999999999999999999987653
No 131
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1e-41 Score=345.33 Aligned_cols=251 Identities=18% Similarity=0.160 Sum_probs=207.6
Q ss_pred cccccccCCCCCCceEEEEEeCCC-cEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccce-ec------CCee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDED-RWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCC-CE------GEER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~-~~------~~~~ 125 (488)
...|.+.|.+|||+.||+|....+ ..||+|++-..+....+.+.+|+++|++|+ |+|||.+++.. .. .-.+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 457788899999999999996554 899999987666666788999999999996 99999999932 21 1257
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
+|.||||.||.|-+++..+....|++.++++|+.|+++|+++||... ||||||||-+||||+.+|..||||||.+....
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~ 197 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKI 197 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccccc
Confidence 89999999999999998665666999999999999999999999975 69999999999999999999999999987433
Q ss_pred CCC-------------ccccccCCCCcccc---ccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc
Q 011349 205 DGK-------------SYSTNLAFTPPEYL---RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 205 ~~~-------------~~~~t~~y~aPE~~---~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 268 (488)
... ....|+.|+|||++ .+...+.|+|||+|||+||-|+....||...+. ..++..
T Consensus 198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------laIlng 269 (738)
T KOG1989|consen 198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------LAILNG 269 (738)
T ss_pred CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------eeEEec
Confidence 221 12458999999987 457789999999999999999999999865422 222222
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
...-+..+..+..+.+||..||+.+|.+||++-+++..+..+...
T Consensus 270 ~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 270 NYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred cccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 222222345688999999999999999999999999998877644
No 132
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.9e-41 Score=318.19 Aligned_cols=245 Identities=21% Similarity=0.274 Sum_probs=204.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.+.+.||+|++|.||+|.. .+++.|++|.+..... .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 45667889999999999995 4688999999875432 23567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
+|++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++...... .
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 9999999997644567999999999999999999999999 9999999999999999999999999988654432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+++.|+|||++.+..++.++|||||||++++|+||+.|+........... ... ......+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK----IIR-GVFPPVSQMYSQQLAQLIDQ 235 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHc-CCCCCCccccCHHHHHHHHH
Confidence 4578899999999988899999999999999999999998765432111111 111 11122333556789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||+.+|++||++.+++.+
T Consensus 236 ~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 236 CLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HccCCcccCcCHHHHhhC
Confidence 999999999999999876
No 133
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.1e-41 Score=322.28 Aligned_cols=251 Identities=18% Similarity=0.244 Sum_probs=199.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCc----EEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDR----WIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++++++.||+|+||+||+|.+ .+++ .|++|.+...... ....+..|+..+.+++||||+++++++. +...++|
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence 346778899999999999995 3454 4788887643321 2356788888999999999999999875 4567899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
+||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++......
T Consensus 87 ~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 87 TQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred EEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 999999999999964 3456999999999999999999999999 9999999999999999999999999997653321
Q ss_pred -----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...++..|+|||.+.++.++.++|||||||++|||+| |..|+.+...... ...+........+..++..
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-----PDLLEKGERLAQPQICTID 239 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCCCcCCCCCCCCHH
Confidence 2345678999999998889999999999999999998 8877755322111 1111111111222334567
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+++.+||..+|++|||+.++++.|..+...
T Consensus 240 ~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 240 VYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 89999999999999999999999999887754
No 134
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.7e-42 Score=349.04 Aligned_cols=247 Identities=18% Similarity=0.196 Sum_probs=202.9
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCC-------
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGE------- 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 123 (488)
..|.+.+.||+|+||+||+|. ..+|+.||||++...... ....+.+|+..+..++|+||++++..+....
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 456888899999999999998 567999999999765422 2346889999999999999999888765432
Q ss_pred -eeeEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 124 -ERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 124 -~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccC
Confidence 368999999999999988642 3457999999999999999999999999 999999999999999999999999998
Q ss_pred ccCCC------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC
Q 011349 201 KNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 201 ~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
+.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||............ .. ......
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~----~~-~~~~~~ 265 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT----LA-GRYDPL 265 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----hc-CCCCCC
Confidence 76432 22456899999999999989999999999999999999999988654322111111 11 111234
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+...++++.+++.+||..||.+||++.+++.+
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 45567889999999999999999999999986
No 135
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=7.6e-42 Score=338.41 Aligned_cols=244 Identities=16% Similarity=0.133 Sum_probs=197.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||++.. .+++.||||+++... ......+.+|+.++..++||||+++++.+.+++..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 357788899999999999994 568999999997432 1234568889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++||+|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 82 FLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred CCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999986 4567999999999999999999999999 999999999999999999999999998643211
Q ss_pred -----------------------------------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCc
Q 011349 207 -----------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 251 (488)
Q Consensus 207 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~ 251 (488)
....||+.|+|||++.+..++.++|||||||++|||+||..||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 124689999999999999999999999999999999999998865
Q ss_pred chhhhhhccccccccccccCCCCC--hhhHHHHHHHHHHhccCCCCCCCC---HHHHHHH
Q 011349 252 HALDLIRGKNFLMLMDSCLEGHFS--NDDGTELVRLASRCLQYEPRERPN---AKSLVAS 306 (488)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~ 306 (488)
......... +........++ ...+.++.+++.+|+. +|.+|++ +.+++.|
T Consensus 239 ~~~~~~~~~----i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ETPQETYRK----VMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCHHHHHHH----HHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 432221111 11000000111 1245778999999874 9999984 7788877
No 136
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.9e-41 Score=325.54 Aligned_cols=256 Identities=19% Similarity=0.242 Sum_probs=204.4
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCc--EEEEEEccCCC-CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDR--WIAVKRFNRSA-WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
|+++.+.+.||+|+||.||+|... ++. .+++|.++... ....+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 356678889999999999999854 343 47898887432 22345789999999999 79999999999998889999
Q ss_pred EEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 128 VAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEE
Confidence 999999999999986421 135889999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccc
Q 011349 194 LSCFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSC 269 (488)
Q Consensus 194 l~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 269 (488)
|+|||++...... .....+..|+|||++.+..++.++|||||||++|||++ |..||.......... .+...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~-----~~~~~ 234 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE-----KLPQG 234 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHhcC
Confidence 9999998643321 11223457999999988889999999999999999998 888775442221111 11111
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.....+..++..+.+|+.+||..+|.+|||+.+++..|+.+....
T Consensus 235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 122234456788999999999999999999999999998877654
No 137
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.3e-41 Score=324.53 Aligned_cols=250 Identities=22% Similarity=0.321 Sum_probs=203.0
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
+.+++.||+|+||.||++... ....||+|.+..... .....+.+|+.++.++ +|+||+++++++..++..++
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 93 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYV 93 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEE
Confidence 467788999999999999853 236799999875432 2234688999999999 79999999999999999999
Q ss_pred EEecCCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 128 VAEFMPNETLSKHLFHW--------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
||||+++|+|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+|
T Consensus 94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEE
Confidence 99999999999998531 2356899999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccc
Q 011349 194 LSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 194 l~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 266 (488)
|+|||+++...... ...++..|+|||.+.+..++.++|||||||++|||++ |..|++........ ..+
T Consensus 173 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~ 247 (293)
T cd05053 173 IADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-----KLL 247 (293)
T ss_pred eCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-----HHH
Confidence 99999998654322 1223567999999988889999999999999999998 87776543222111 111
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
........+...+..+.+|+.+||..+|.+|||+.++++.|+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 248 KEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111122334456788999999999999999999999999998764
No 138
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.8e-42 Score=345.68 Aligned_cols=246 Identities=21% Similarity=0.248 Sum_probs=192.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC--------Cee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--------EER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~~~ 125 (488)
.|.+++.||+|+||.||+|.. .+++.||||++.... ....+|+.+|+.++|||||++++++... ..+
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 568889999999999999995 568899999985432 3456899999999999999998876432 246
Q ss_pred eEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCccc
Q 011349 126 LLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKN 202 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~ 202 (488)
++||||++ ++|.+++.. .....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.
T Consensus 143 ~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 143 NVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKN 220 (440)
T ss_pred EEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccchh
Confidence 79999997 577776643 23567999999999999999999999999 99999999999998654 799999999986
Q ss_pred CCCC---CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc----------------
Q 011349 203 SRDG---KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF---------------- 262 (488)
Q Consensus 203 ~~~~---~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~---------------- 262 (488)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||+||.+||.+...........
T Consensus 221 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~ 300 (440)
T PTZ00036 221 LLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNP 300 (440)
T ss_pred ccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhch
Confidence 5432 24567899999999876 468999999999999999999998886542211000000
Q ss_pred -------ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 -------LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 -------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.......+...++...+.++.+|+.+||..||.+|||+.+++.|
T Consensus 301 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 301 NYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00000011112233456789999999999999999999999987
No 139
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.3e-41 Score=322.98 Aligned_cols=254 Identities=20% Similarity=0.311 Sum_probs=201.1
Q ss_pred cccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 127 (488)
.+.+++.||+|+||.||+|.. .++..||||.+........+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 356788899999999999974 2578899999976654445678999999999999999999998754 346899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 85 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 85 VMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred EEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 9999999999999864 2346899999999999999999999999 9999999999999999999999999998654332
Q ss_pred c-------cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh---ccc--------cccccccc
Q 011349 208 S-------YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---GKN--------FLMLMDSC 269 (488)
Q Consensus 208 ~-------~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~---~~~--------~~~~~~~~ 269 (488)
. ..++..|+|||++.+..++.++|||||||++|||++|..++......... ... ....+...
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN 242 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence 1 11234599999999888999999999999999999987654322111100 000 00111111
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.....+...+.++.+++.+||..+|++|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 12223345678899999999999999999999999999865
No 140
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.7e-41 Score=317.93 Aligned_cols=239 Identities=21% Similarity=0.348 Sum_probs=192.2
Q ss_pred cCCCCCCceEEEEEeCC-------------CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 61 EHGEKAPNVVYKGLVDE-------------DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.||+|+||.||+|.+.. ...|++|.+..........+..|+.+++.++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 57999999999998432 23589999876554445678899999999999999999999998889999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC-------CeeccCCCc
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-------PRLSCFGLM 200 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~-------~kl~Dfgla 200 (488)
||||+++++|..++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. ++++|||++
T Consensus 82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999999888753 3456999999999999999999999999 999999999999987664 899999999
Q ss_pred ccCCCCCccccccCCCCccccc-cCCcccCCceEeehHHHHHHh-hCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 201 KNSRDGKSYSTNLAFTPPEYLR-TGRVIPESVVYSFGTLLLDLL-SGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 201 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~sDv~slG~il~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
..........++..|+|||.+. +..++.++|||||||++|||+ +|..|+......... ....... ......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-----~~~~~~~--~~~~~~ 232 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-----RFYEGQC--MLVTPS 232 (262)
T ss_pred ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-----HHHhcCc--cCCCCC
Confidence 8776655667889999999886 466889999999999999998 466665433211110 0000100 111223
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+.++.+|+.+||+.||.+||++.+|+.+|+
T Consensus 233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 233 CKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 567899999999999999999999998863
No 141
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.3e-41 Score=332.19 Aligned_cols=241 Identities=17% Similarity=0.233 Sum_probs=195.0
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.++.++ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 579999999999994 5688999999986432 2234688999999998 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 82 DLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 9998886 3457999999999999999999999999 99999999999999999999999999875321 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh-hc--cccccccccccCCCCChhhHHHHHHHHHH
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-RG--KNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
|+.|+|||++.+..++.++|||||||++|||+||+.||........ .. ......... ....+...+..+.+++.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASHVLKG 236 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999998853211000 00 000011111 112344556789999999
Q ss_pred hccCCCCCCCCH------HHHHHH
Q 011349 289 CLQYEPRERPNA------KSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~------~~il~~ 306 (488)
||..||.+|+++ .+++.|
T Consensus 237 ~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 237 FLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HhccCHHHcCCCCCCCCHHHHHcC
Confidence 999999999984 577766
No 142
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.4e-41 Score=317.88 Aligned_cols=248 Identities=25% Similarity=0.358 Sum_probs=205.8
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.+.||.|+||.||+|.. .|+.||||.+..... ..+.+.+|+.+++.++|+||+++++++......++||||+++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 446778889999999999986 478899999986653 456899999999999999999999999988999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-ccccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-YSTNL 213 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~t~ 213 (488)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++....... ...+.
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 163 (256)
T cd05039 85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPV 163 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCCCcc
Confidence 99999997544447999999999999999999999999 99999999999999999999999999987643322 23356
Q ss_pred CCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC
Q 011349 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292 (488)
Q Consensus 214 ~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 292 (488)
.|+|||++.+..++.++||||||+++|||++ |..|+......... ..+........+...++.+.+++.+||..
T Consensus 164 ~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 238 (256)
T cd05039 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-----PHVEKGYRMEAPEGCPPEVYKVMKDCWEL 238 (256)
T ss_pred cccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHhcCCCCCCccCCCHHHHHHHHHHhcc
Confidence 7999999988889999999999999999997 88776543222111 11111112223345578899999999999
Q ss_pred CCCCCCCHHHHHHHhchh
Q 011349 293 EPRERPNAKSLVASLTPL 310 (488)
Q Consensus 293 dp~~Rps~~~il~~l~~~ 310 (488)
+|++|||+.++++.|+.+
T Consensus 239 ~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 239 DPAKRPTFKQLREQLALI 256 (256)
T ss_pred ChhhCcCHHHHHHHHhcC
Confidence 999999999999998753
No 143
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.2e-41 Score=323.04 Aligned_cols=247 Identities=20% Similarity=0.330 Sum_probs=197.6
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+.+.||+|+||.||+|... .+..||||+++.... .....+.+|+.+++.++||||+++++++..+...++|
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 87 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 87 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEE
Confidence 466778899999999998742 256799999865332 2234688999999999999999999999988999999
Q ss_pred EecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 129 AEFMPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
|||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~ 166 (277)
T cd05062 88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMT 166 (277)
T ss_pred EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCc
Confidence 99999999999986421 134678899999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCC
Q 011349 201 KNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 201 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+...... ...+++.|+|||.+.++.++.++|||||||++|||++ |..|+......... ..+.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~-----~~~~~~~~~~ 241 (277)
T cd05062 167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVL-----RFVMEGGLLD 241 (277)
T ss_pred cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCCcCC
Confidence 7543322 2234678999999998889999999999999999999 56666543221111 1111111112
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+...+..+.+++.+||+.+|++|||+.+++..|+
T Consensus 242 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 242 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 33455678999999999999999999999999876
No 144
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.2e-41 Score=321.37 Aligned_cols=240 Identities=23% Similarity=0.365 Sum_probs=194.0
Q ss_pred cCCCCCCceEEEEEeC-CC-------cEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 61 EHGEKAPNVVYKGLVD-ED-------RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.||+|+||.||+|... .+ ..||+|.+........+.+..|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 5799999999999843 22 348888886554344567899999999999999999999999989999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC--------CeeccCCCcccCC
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--------PRLSCFGLMKNSR 204 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~--------~kl~Dfgla~~~~ 204 (488)
++|+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++. ++++|||++....
T Consensus 82 ~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 82 KFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred CCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 99999999864 2346899999999999999999999999 999999999999987765 5999999988776
Q ss_pred CCCccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 205 DGKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 205 ~~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
......+++.|+|||++.+ ..++.++|||||||++|||++|..++......... . ..... ....+...+.++.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~---~~~~~--~~~~~~~~~~~~~ 233 (258)
T cd05078 160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-L---QFYED--RHQLPAPKWTELA 233 (258)
T ss_pred CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-H---HHHHc--cccCCCCCcHHHH
Confidence 6666778899999999986 45789999999999999999996444322111100 0 00010 1123334457899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+++.+||+.+|++|||++++++.|+
T Consensus 234 ~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 234 NLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHhccChhhCCCHHHHHHhcC
Confidence 9999999999999999999999864
No 145
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.5e-41 Score=322.90 Aligned_cols=247 Identities=19% Similarity=0.226 Sum_probs=200.4
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+.+.||+|+||+||+|.. .+++.||+|.+...... ....+.+|+++++.++|+||+.+.+++..++..++||||+
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05632 3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIM 82 (285)
T ss_pred eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEec
Confidence 4556789999999999994 56889999998754322 2345788999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Ccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSY 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 209 (488)
++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++...... ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05632 83 NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR 161 (285)
T ss_pred cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence 9999998886544557999999999999999999999999 999999999999999999999999998765332 234
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.|+..|+|||.+.+..++.++|||||||++|||++|..||.......... .....+.. ....++...+..+.+|+.+|
T Consensus 162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05632 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKRE-EVDRRVLE-TEEVYSAKFSEEAKSICKML 239 (285)
T ss_pred CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhhhc-cccccCccCCHHHHHHHHHH
Confidence 67899999999998889999999999999999999999886532211110 01111100 01123344567889999999
Q ss_pred ccCCCCCCCC-----HHHHHHH
Q 011349 290 LQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps-----~~~il~~ 306 (488)
|+.||++||+ +.+++.+
T Consensus 240 l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 240 LTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ccCCHhHcCCCcccChHHHHcC
Confidence 9999999999 7788876
No 146
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=335.76 Aligned_cols=247 Identities=19% Similarity=0.237 Sum_probs=205.3
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.++||+.||.|+||.||+|..+ ++-..|.|+|........+++.-|+++|..+.||+||++++.|...+.++|..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 34589999999999999999944 45556889887766667789999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC----CCCc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGKS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~~ 208 (488)
.||-++.++.. -+..|++.++.-++.|++.||.|||+++ |||||||..|||++-+|.++|+|||++.... ...+
T Consensus 112 ~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs 189 (1187)
T KOG0579|consen 112 GGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS 189 (1187)
T ss_pred CCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence 99999887765 4567999999999999999999999999 9999999999999999999999999875433 2458
Q ss_pred cccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc-ccCCCCChhhHHHH
Q 011349 209 YSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS-CLEGHFSNDDGTEL 282 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 282 (488)
+.|||.|||||+... .+|+.++||||||++|.||..+.+|...-.. +. .+..+-.. ......|..++..+
T Consensus 190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp--MR--VllKiaKSePPTLlqPS~Ws~~F 265 (1187)
T KOG0579|consen 190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP--MR--VLLKIAKSEPPTLLQPSHWSRSF 265 (1187)
T ss_pred ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch--HH--HHHHHhhcCCCcccCcchhhhHH
Confidence 899999999998753 6799999999999999999999976432211 10 01111111 11112345677889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+||.+||..||++.++++|
T Consensus 266 ~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 266 SDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHHHHHhcCCccCCCHHHHhhC
Confidence 999999999999999999999987
No 147
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.9e-41 Score=330.37 Aligned_cols=232 Identities=20% Similarity=0.244 Sum_probs=188.6
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHH-HHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEAR-AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||++..... .....+..|.. +++.++||||+++++++.+.+..++||||++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999995 4688999999865321 12334555554 578889999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|...+. ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 82 ELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 9998886 3456899999999999999999999999 99999999999999999999999999875322 123468
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||.+.+..++.++|||||||++|||++|..||........... +... ....+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~~~l~ 232 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDN----ILHK--PLQLPGGKTVAACDLLVGLLH 232 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHH----HhcC--CCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999998865432221111 1111 112344556789999999999
Q ss_pred CCCCCCCCHH
Q 011349 292 YEPRERPNAK 301 (488)
Q Consensus 292 ~dp~~Rps~~ 301 (488)
.||.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (321)
T cd05603 233 KDQRRRLGAK 242 (321)
T ss_pred CCHhhcCCCC
Confidence 9999998764
No 148
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.1e-41 Score=335.72 Aligned_cols=250 Identities=20% Similarity=0.179 Sum_probs=199.5
Q ss_pred hcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 50 TSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 50 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
.-....+.+++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 33345668889999999999999995 468889999986422 12234578999999999999999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||++||+|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 119 ~lv~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 119 YMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred EEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 99999999999999985 345899999999999999999999999 99999999999999999999999999976543
Q ss_pred C-----CccccccCCCCccccccC----CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc--cCCCC
Q 011349 206 G-----KSYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC--LEGHF 274 (488)
Q Consensus 206 ~-----~~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 274 (488)
. ....||+.|+|||++.+. .++.++|||||||++|||++|..||........ ...+.... ...+.
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~ 270 (371)
T cd05622 195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----YSKIMNHKNSLTFPD 270 (371)
T ss_pred CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCcccCCC
Confidence 2 245689999999998753 378899999999999999999999875432111 11111110 11111
Q ss_pred ChhhHHHHHHHHHHhccCCCCC--CCCHHHHHHHh
Q 011349 275 SNDDGTELVRLASRCLQYEPRE--RPNAKSLVASL 307 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~l 307 (488)
....+..+.+++.+||..++.+ |+++.++++|.
T Consensus 271 ~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 271 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 2245678999999999844433 78999999885
No 149
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.9e-41 Score=330.86 Aligned_cols=234 Identities=20% Similarity=0.225 Sum_probs=189.2
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHH-HHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEAR-AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||++|+
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 579999999999995 4678899999875321 12234444544 567789999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 82 ELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 9999886 3456889999999999999999999999 99999999999999999999999999875432 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|..||.......... .+... ....+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~----~i~~~--~~~~~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD----NILNK--PLQLKPNITNSARHLLEGLLQ 232 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHH----HHHhC--CcCCCCCCCHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999886543221111 11111 112233456789999999999
Q ss_pred CCCCCCCCHHHH
Q 011349 292 YEPRERPNAKSL 303 (488)
Q Consensus 292 ~dp~~Rps~~~i 303 (488)
.+|.+||++.+.
T Consensus 233 ~~p~~R~~~~~~ 244 (325)
T cd05602 233 KDRTKRLGAKDD 244 (325)
T ss_pred cCHHHCCCCCCC
Confidence 999999987743
No 150
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.3e-41 Score=331.95 Aligned_cols=232 Identities=19% Similarity=0.211 Sum_probs=188.9
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHH-HHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEAR-AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|. ..+|+.||||++..... .....+..|.. +++.++||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 57999999999999 45789999999865421 22334556655 467789999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|...+. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence 9998886 4567999999999999999999999999 99999999999999999999999999875322 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|..||........... ..... ...+...+..+.+++.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDN----ILHKP--LVLRPGASLTAWSILEELLE 232 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHH----HHcCC--ccCCCCCCHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998865432221111 11110 11223456778999999999
Q ss_pred CCCCCCCCHH
Q 011349 292 YEPRERPNAK 301 (488)
Q Consensus 292 ~dp~~Rps~~ 301 (488)
.+|.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (325)
T cd05604 233 KDRQRRLGAK 242 (325)
T ss_pred cCHHhcCCCC
Confidence 9999999875
No 151
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-41 Score=328.40 Aligned_cols=246 Identities=20% Similarity=0.176 Sum_probs=208.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 129 (488)
.|.+.+.||+|.||.||+++. .+|+.+|+|++....... ...+.+|+.+|+++. |||||.++++|.+....++||
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvm 115 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVM 115 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEE
Confidence 467778899999999999994 459999999998766443 358999999999998 999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC----CCCCeeccCCCcccCCC
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ----DGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla~~~~~ 205 (488)
|++.||.|.+.|... .+++..+..++.||+.++.|||+.| |+||||||+|+|+.. ++.+|++|||++.....
T Consensus 116 EL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 116 ELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred EecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 999999999999754 3999999999999999999999999 999999999999953 35799999999998776
Q ss_pred C---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 206 G---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 206 ~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
. ...+||+.|+|||++.+..++..+||||+||++|.|++|.+||.+..............+ ....+.-...+..+
T Consensus 192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--~f~~~~w~~is~~a 269 (382)
T KOG0032|consen 192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--DFTSEPWDDISESA 269 (382)
T ss_pred CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--CCCCCCccccCHHH
Confidence 3 356899999999999999999999999999999999999999987653332221111100 11112222457889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+|+..||..|+|+.++++|
T Consensus 270 kd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 270 KDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HHHHHHhcccCcccCCCHHHHhcC
Confidence 999999999999999999999997
No 152
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=5e-41 Score=317.59 Aligned_cols=248 Identities=25% Similarity=0.351 Sum_probs=206.1
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++.+.+.||+|+||.||+|...++..||||.+.... .....+.+|+.++++++|+||+++++++......++||||+++
T Consensus 7 ~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (261)
T cd05034 7 SLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSK 85 (261)
T ss_pred heeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCC
Confidence 456788899999999999998778889999998654 3456899999999999999999999999888899999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 86 ~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 164 (261)
T cd05034 86 GSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGA 164 (261)
T ss_pred CCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhcc
Confidence 99999997645567999999999999999999999999 9999999999999999999999999987654321 22
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+..|+|||.+.+..++.++||||||+++++|+| |+.|+.......... .+........+...+.++.+++.+
T Consensus 165 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~ 239 (261)
T cd05034 165 KFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLE-----QVERGYRMPRPPNCPEELYDLMLQ 239 (261)
T ss_pred CCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHHHHH
Confidence 33568999999998889999999999999999999 887775432211111 111111222334457789999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|++||++.++++.|+.
T Consensus 240 ~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 240 CWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HcccCcccCCCHHHHHHHHhc
Confidence 999999999999999998864
No 153
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.2e-41 Score=316.77 Aligned_cols=242 Identities=20% Similarity=0.274 Sum_probs=196.1
Q ss_pred cCCCCCCceEEEEEeC---CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.||+|+||.||+|.+. .+..||||++...... ..+.+.+|+.++++++||||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4799999999999753 3556999999765422 2456899999999999999999999875 457899999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-------c
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-------Y 209 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-------~ 209 (488)
|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++........ .
T Consensus 81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999864 3456999999999999999999999999 99999999999999999999999999875543221 1
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||.+.+..++.++|||||||++||+++ |..|+....... ....+........+..+++++.+++.+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-----VMSFIEQGKRLDCPAECPPEMYALMKD 233 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-----HHHHHHCCCCCCCCCCCCHHHHHHHHH
Confidence 22468999999988889999999999999999996 887765432211 111111222233455567899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchh
Q 011349 289 CLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~ 310 (488)
||..+|++||++.+|.+.|+.+
T Consensus 234 c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 234 CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999998764
No 154
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=5.8e-41 Score=317.03 Aligned_cols=247 Identities=23% Similarity=0.303 Sum_probs=201.7
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.+.||+|++|.||+|....+..||+|.+.... ...+.+.+|+.++++++|+|++++++++. .+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 356778899999999999997777779999987544 33567899999999999999999998874 4568999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence 99999997544456899999999999999999999999 9999999999999999999999999997653322 22
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||...+..++.++|||||||++|||+| |..|+.......... .+........+...+..+.+++.+
T Consensus 164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05069 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLE-----QVERGYRMPCPQGCPESLHELMKL 238 (260)
T ss_pred ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCcccCHHHHHHHHH
Confidence 34678999999988889999999999999999999 777765432211111 011111122344567889999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|.+||+++++++.|+.
T Consensus 239 ~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 239 CWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HccCCcccCcCHHHHHHHHhc
Confidence 999999999999999998864
No 155
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.6e-41 Score=329.40 Aligned_cols=241 Identities=18% Similarity=0.265 Sum_probs=195.9
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEec
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
++++.||+|+||.||+|. ..+|+.||||+++... ....+.+..|..++..+. |++|+++++++...+..++||||
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey 82 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY 82 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence 566788999999999999 4568999999987542 123356788999998885 57788899999888999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CC
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~ 207 (488)
++||+|.+++. ....+++.++..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... ..
T Consensus 83 ~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 83 VNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 99999999886 4456999999999999999999999999 99999999999999999999999999875432 22
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+... ...++...+.++.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~ 233 (323)
T cd05615 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ----SIMEH--NVSYPKSLSKEAVSICK 233 (323)
T ss_pred CccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH----HHHhC--CCCCCccCCHHHHHHHH
Confidence 4468999999999998889999999999999999999999886543221111 11111 11234455678999999
Q ss_pred HhccCCCCCCCCH-----HHHHHH
Q 011349 288 RCLQYEPRERPNA-----KSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~-----~~il~~ 306 (488)
+||+.+|.+|++. .++++|
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 234 GLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred HHcccCHhhCCCCCCCCHHHHhcC
Confidence 9999999999974 455554
No 156
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.8e-41 Score=336.50 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=201.0
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcC-CCCCcccccceecCCeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 127 (488)
+.+.+.||+|+||.||+|.+. .+..||||+++...... .+.+.+|+.+|.++. |||||++++++...+..++
T Consensus 39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~i 118 (401)
T cd05107 39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYI 118 (401)
T ss_pred eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEE
Confidence 456788999999999999853 24579999998654222 346889999999997 9999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------------------------------------------------------------
Q 011349 128 VAEFMPNETLSKHLFHWE-------------------------------------------------------------- 145 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~-------------------------------------------------------------- 145 (488)
||||+++|+|.+++....
T Consensus 119 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (401)
T cd05107 119 ITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGT 198 (401)
T ss_pred EEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhh
Confidence 999999999999886421
Q ss_pred ----------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 146 ----------------------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 146 ----------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
...+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~~ 277 (401)
T cd05107 199 VKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGKL 277 (401)
T ss_pred hhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCCE
Confidence 124678889999999999999999998 999999999999999999
Q ss_pred CeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..|+........ ...
T Consensus 278 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~----~~~ 353 (401)
T cd05107 278 VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ----FYN 353 (401)
T ss_pred EEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH----HHH
Confidence 999999999764321 12345678999999998889999999999999999998 7777654321111 011
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.+....+...+...+.++.+++.+||..+|.+||++.+|+..|+.+
T Consensus 354 ~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 354 AIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111112233445678899999999999999999999999999875
No 157
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.8e-41 Score=325.27 Aligned_cols=250 Identities=21% Similarity=0.310 Sum_probs=201.8
Q ss_pred ccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
+.+.+.||+|+||.||+|.. ..+..||||+++.... ...+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 116 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILV 116 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEE
Confidence 46677889999999999973 1245799999875432 2245689999999999 79999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++|+|.+++.......+++.++..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||+++......
T Consensus 117 v~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 195 (302)
T cd05055 117 ITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDS 195 (302)
T ss_pred EEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCC
Confidence 999999999999997534445899999999999999999999999 9999999999999999999999999988654322
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...++..|+|||.+.+..++.++|||||||++|||+| |..|+........ +...+........+...+.
T Consensus 196 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 271 (302)
T cd05055 196 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK----FYKLIKEGYRMAQPEHAPA 271 (302)
T ss_pred ceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH----HHHHHHcCCcCCCCCCCCH
Confidence 2234678999999998889999999999999999998 8877654321110 1111111112222334567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
++.+++.+||..+|++|||+.+++..|+++
T Consensus 272 ~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 272 EIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 899999999999999999999999998763
No 158
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.7e-41 Score=318.11 Aligned_cols=244 Identities=20% Similarity=0.247 Sum_probs=201.0
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC-----ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP-----DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+.||+|++|.||+|. ..+++.||+|.+...... ....+.+|+.++++++||||+++++++..++..++|||
T Consensus 5 ~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 84 (263)
T cd06625 5 RRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFME 84 (263)
T ss_pred cccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEE
Confidence 566778999999999999 456899999998754321 13468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++|++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++.....
T Consensus 85 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 85 YMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred ECCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence 999999999986 3456899999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....++..|+|||.+.+..++.++||||||+++|||++|+.||........ .............+...+..+.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 237 (263)
T cd06625 162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA----IFKIATQPTNPQLPSHVSPDAR 237 (263)
T ss_pred ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH----HHHHhccCCCCCCCccCCHHHH
Confidence 234567899999999998899999999999999999999988754311110 0111111122234455678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+++.+||..+|.+|||+.+++.+.
T Consensus 238 ~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 238 NFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred HHHHHHhhcCcccCCCHHHHhhCC
Confidence 999999999999999999999863
No 159
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3e-41 Score=326.97 Aligned_cols=254 Identities=20% Similarity=0.308 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEEeC--------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD--------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEE 124 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 124 (488)
.+.+.+.||+|+||.||++... ++..||+|.++.... .....+.+|+.++..+ +||||+++++++...+.
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 98 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 4678899999999999999742 235699999986532 2345688999999999 79999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG 190 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~ 190 (488)
.++||||+++|+|.+++.... ...+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++
T Consensus 99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~ 177 (307)
T cd05098 99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDN 177 (307)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCC
Confidence 999999999999999996432 135899999999999999999999999 99999999999999999
Q ss_pred CCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccc
Q 011349 191 NPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFL 263 (488)
Q Consensus 191 ~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~ 263 (488)
.+||+|||+++...... ...+++.|+|||.+.+..++.++|||||||++|||++ |..|+........ .
T Consensus 178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~-----~ 252 (307)
T cd05098 178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----F 252 (307)
T ss_pred cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH-----H
Confidence 99999999987654321 1123468999999998889999999999999999998 7666654322111 1
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..+........+...+.++.+++.+||..+|.+|||+.++++.|+.+....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 253 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 111111222334456788999999999999999999999999999887653
No 160
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.2e-41 Score=321.25 Aligned_cols=239 Identities=23% Similarity=0.353 Sum_probs=190.6
Q ss_pred cCCCCCCceEEEEEeCC-------------------------CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccc
Q 011349 61 EHGEKAPNVVYKGLVDE-------------------------DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNL 115 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 115 (488)
.||+|+||.||+|.+.. ...|++|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 57999999999997421 23589999876543334578899999999999999999
Q ss_pred ccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-----
Q 011349 116 IGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----- 190 (488)
Q Consensus 116 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----- 190 (488)
++++..+...++||||+++|+|..++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999988864 3456899999999999999999999999 99999999999997644
Q ss_pred --CCeeccCCCcccCCCCCccccccCCCCcccccc-CCcccCCceEeehHHHHHHh-hCCCCCCcchhhhhhcccccccc
Q 011349 191 --NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLL-SGKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 191 --~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~-tg~~p~~~~~~~~~~~~~~~~~~ 266 (488)
.+|++|||++..........++..|+|||.+.+ ..++.++|||||||++|||+ +|..|+......... ...
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~ 234 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-----RFY 234 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-----HHH
Confidence 379999999876554445567889999998875 56899999999999999985 677776543221110 011
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
... ...+...++.+.+++.+||+.+|++|||+.++++.|.
T Consensus 235 ~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 235 EKK--HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred Hhc--cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 110 1122223467899999999999999999999999874
No 161
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7.5e-41 Score=320.54 Aligned_cols=253 Identities=19% Similarity=0.311 Sum_probs=200.1
Q ss_pred ccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
+.+++.||+|+||.||++.+ .++..||+|.++... ......+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 46788899999999999974 347789999987543 22345799999999999999999999988765 56899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||++|++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 86 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999999854 2346899999999999999999999999 9999999999999999999999999998654322
Q ss_pred -------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------ccc---ccccccccc
Q 011349 208 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------GKN---FLMLMDSCL 270 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------~~~---~~~~~~~~~ 270 (488)
...++..|+|||.+.+..++.++|||||||++|||+|+..|.......... ... ....+....
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK 243 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc
Confidence 234566799999998888999999999999999999987653221100000 000 000011111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
....+...+..+.+|+.+||+.+|.+|||+.+++..|+.+
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1222344678899999999999999999999999998865
No 162
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-41 Score=327.44 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=209.0
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCCh-HHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.+.++||+|-||.|.++....+..||||+++.....+. .+|.+|+++|.+|+|||||+++|+|..++.+++|+|||++|
T Consensus 541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnG 620 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENG 620 (807)
T ss_pred ehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcC
Confidence 46689999999999999998889999999998765554 78999999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccc-----
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYS----- 210 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~----- 210 (488)
+|.+++....-..+......+|+.||+.||+||.+.+ +|||||.+.|+|+|.++++||+|||+++....+..+.
T Consensus 621 DLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~ 699 (807)
T KOG1094|consen 621 DLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRA 699 (807)
T ss_pred cHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeeecce
Confidence 9999997544344566778889999999999999999 9999999999999999999999999999776655432
Q ss_pred -cccCCCCccccccCCcccCCceEeehHHHHHHhh--CCCCCCcchhhhhhccccccccccc---cCCCCChhhHHHHHH
Q 011349 211 -TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--GKHIPPSHALDLIRGKNFLMLMDSC---LEGHFSNDDGTELVR 284 (488)
Q Consensus 211 -~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~ 284 (488)
-.++|||||.+.-+++|.+||||+||+++||+++ ...|+.....+.. .++...+++.. .-...|.-+|..+.+
T Consensus 700 vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-ven~~~~~~~~~~~~~l~~P~~cp~~lye 778 (807)
T KOG1094|consen 700 VLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-VENAGEFFRDQGRQVVLSRPPACPQGLYE 778 (807)
T ss_pred eeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-HHhhhhhcCCCCcceeccCCCcCcHHHHH
Confidence 2589999999999999999999999999999865 4556543322211 11112222211 112345567899999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 285 LASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
++.+||..|-++||+++++..+|...
T Consensus 779 lml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 779 LMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 99999999999999999999988653
No 163
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.5e-41 Score=324.78 Aligned_cols=254 Identities=18% Similarity=0.265 Sum_probs=209.4
Q ss_pred HHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCe
Q 011349 46 LRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124 (488)
Q Consensus 46 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 124 (488)
+...++-...|.+++.||+|+||.||+|. ..+++.||||.+........+.+.+|+.+++.++|+||+++++++..++.
T Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 90 (297)
T cd06656 11 IVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 90 (297)
T ss_pred hcccCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCE
Confidence 33444555677889999999999999999 46799999999987665556778999999999999999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+++++|.+++. ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....
T Consensus 91 ~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 91 LWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred EEEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 999999999999999984 356899999999999999999999999 9999999999999999999999999987654
Q ss_pred CCC----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 205 DGK----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 205 ~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
... ...+++.|+|||.+.+..++.++|||||||++|+|++|..||........ ..............+...+.
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 243 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLIATNGTPELQNPERLSA 243 (297)
T ss_pred CCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh---eeeeccCCCCCCCCccccCH
Confidence 322 34578899999999988899999999999999999999988754321110 00000011111122344567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+++.+||..+|++||++.+++.+
T Consensus 244 ~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 244 VFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 78999999999999999999999986
No 164
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=332.16 Aligned_cols=241 Identities=19% Similarity=0.269 Sum_probs=205.9
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhh
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 139 (488)
.||+|+||+||-|+ .+++..+|||-+........+-+..|+.+-++++|.|||+++|.+.+++.+-|.||-++||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 47999999999999 55677899999987776667789999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCcccCC----CCCccccc
Q 011349 140 HLFHWENQPM--KWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSR----DGKSYSTN 212 (488)
Q Consensus 140 ~l~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~----~~~~~~~t 212 (488)
+++. .=+++ ++.+.-.+.+||++||.|||++. |||||||-+|||++ -.|.+||+|||-+++.. -..++.||
T Consensus 662 LLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGT 739 (1226)
T KOG4279|consen 662 LLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGT 739 (1226)
T ss_pred HHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCccccccccc
Confidence 9975 23556 78889999999999999999998 99999999999996 67899999999887653 34578999
Q ss_pred cCCCCccccccC--CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 213 LAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 213 ~~y~aPE~~~~~--~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
..|||||++..+ .|..++|||||||++.||.||++||..-+.+...- ..+---..++++|.+.+.+...+|.+|+
T Consensus 740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM---FkVGmyKvHP~iPeelsaeak~FilrcF 816 (1226)
T KOG4279|consen 740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM---FKVGMYKVHPPIPEELSAEAKNFILRCF 816 (1226)
T ss_pred hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh---hhhcceecCCCCcHHHHHHHHHHHHHHc
Confidence 999999999764 48899999999999999999999986543221111 1111112456788889999999999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 011349 291 QYEPRERPNAKSLVAS 306 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~ 306 (488)
.+||.+||++.++|..
T Consensus 817 epd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 817 EPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCCcccCccHHHhccC
Confidence 9999999999999975
No 165
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.1e-41 Score=314.09 Aligned_cols=241 Identities=26% Similarity=0.394 Sum_probs=198.7
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhh
Q 011349 61 EHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 139 (488)
.||+|+||.||+|...+++.||+|.++...... ...+.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 579999999999998788899999987654322 3468899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----ccccccC
Q 011349 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SYSTNLA 214 (488)
Q Consensus 140 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~~~t~~ 214 (488)
++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ...++..
T Consensus 82 ~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 82 FLRK-KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 8864 2346899999999999999999999999 9999999999999999999999999987543321 1233567
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
|+|||++.+..++.++||||||+++|++++ |..||.......... .+........+...+..+.+++.+||..+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQARE-----QVEKGYRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHHHHHHcccC
Confidence 999999998889999999999999999998 887775542221111 11111122334456788999999999999
Q ss_pred CCCCCCHHHHHHHhc
Q 011349 294 PRERPNAKSLVASLT 308 (488)
Q Consensus 294 p~~Rps~~~il~~l~ 308 (488)
|++||++.++++.|.
T Consensus 235 p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 235 PENRPKFSELQKELA 249 (250)
T ss_pred cccCCCHHHHHHHhc
Confidence 999999999999875
No 166
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.6e-41 Score=322.72 Aligned_cols=257 Identities=16% Similarity=0.189 Sum_probs=205.4
Q ss_pred HHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC
Q 011349 45 QLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE 123 (488)
Q Consensus 45 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 123 (488)
++.+--...+.|+++++||.|+||.||+|.. .++..|++|.+........+.+.+|+.+++.++||||+++++++..+.
T Consensus 3 ~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 82 (292)
T cd06644 3 HVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG 82 (292)
T ss_pred hhhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence 3444444455678999999999999999995 458899999998665445667899999999999999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
..++||||+++++|..++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred eEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999999887753 3456899999999999999999999999 999999999999999999999999998754
Q ss_pred CCC----CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC
Q 011349 204 RDG----KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 204 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
... ....+++.|+|||++.+ ..++.++|||||||++|||++|..|+.......... ....... .....
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~--~~~~~ 237 (292)
T cd06644 161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-KIAKSEP--PTLSQ 237 (292)
T ss_pred cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHH-HHhcCCC--ccCCC
Confidence 322 23457889999999853 446789999999999999999998875432111100 0000000 01112
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+...+.++.+++.+||..+|++||++.+++++
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 238 PSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 33456789999999999999999999999876
No 167
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.2e-40 Score=317.08 Aligned_cols=248 Identities=20% Similarity=0.295 Sum_probs=198.9
Q ss_pred cccccCCCCCCceEEEEEeC-C---CcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCe------
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-E---DRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEE------ 124 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 124 (488)
.+.+.||+|+||.||+|... + +..||||+++..... ....+.+|++.++.++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 46778899999999999853 2 367999999764422 23578999999999999999999998866544
Q ss_pred eeEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 125 RLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
.++||||+++|+|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccce
Confidence 79999999999999888532 2246899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCC
Q 011349 201 KNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 201 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+...... ....+..|+|||.+.+..++.++|||||||++|||++ |..|+........ ...+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~ 235 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI-----YDYLRHGNRLK 235 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCC
Confidence 8654332 1234568999999988889999999999999999999 7666654322111 11111111222
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.+...+..+.+++.+||..||.+|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3445678899999999999999999999999999865
No 168
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.3e-40 Score=315.74 Aligned_cols=253 Identities=19% Similarity=0.267 Sum_probs=206.9
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+.+.||+|+||.||+|... +|+.||+|.++.... ...+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 82 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence 3567788899999999999955 789999999864322 224578999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 131 FMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|+++++|.+++... ....+++.++..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 99999999988642 3456899999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh-hhHHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN-DDGTELV 283 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 283 (488)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.|+......... ....+........+. ..+..+.
T Consensus 162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS---LCKKIEKCDYPPLPADHYSEELR 238 (267)
T ss_pred ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHH---HHhhhhcCCCCCCChhhcCHHHH
Confidence 2346788999999999888999999999999999999999887543221111 000111111112222 4567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
+++.+||..+|++|||+.+|++.|+.+.
T Consensus 239 ~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 239 DLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 9999999999999999999999998764
No 169
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.4e-41 Score=319.73 Aligned_cols=251 Identities=18% Similarity=0.260 Sum_probs=200.9
Q ss_pred ccccccCCCCCCceEEEEEe-CCCc----EEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDR----WIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+++.||+|+||+||+|.+ .+++ .||||.++..... ....+.+|+.++..++||||+++++++.. ...+++|
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~ 87 (279)
T cd05109 9 LKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVT 87 (279)
T ss_pred eeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEE
Confidence 46778899999999999984 4554 4899998754322 24578899999999999999999998865 4578999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++......
T Consensus 88 ~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~ 165 (279)
T cd05109 88 QLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 165 (279)
T ss_pred EcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccce
Confidence 99999999999864 2356999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
...+++.|+|||.+.+..++.++|||||||++|||+| |..|+........ ...+........+...+..+
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 240 (279)
T cd05109 166 YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-----PDLLEKGERLPQPPICTIDV 240 (279)
T ss_pred eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCCCcCCCCccCCHHH
Confidence 1233568999999988889999999999999999998 7776643221111 11111111222234456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.+++.+||..||++||++.+++..|..+....
T Consensus 241 ~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 241 YMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 99999999999999999999999998776543
No 170
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-41 Score=326.68 Aligned_cols=252 Identities=20% Similarity=0.309 Sum_probs=203.4
Q ss_pred ccccccCCCCCCceEEEEEe--------CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV--------DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
+.+.+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++......
T Consensus 17 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (304)
T cd05101 17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 96 (304)
T ss_pred eeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCce
Confidence 46778899999999999973 124579999987543 22346789999999999 899999999999999999
Q ss_pred eEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++||||+++|+|.+++.... ...+++.++..++.||+.||.|||+++ ++||||||+||++++++.
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~~ 175 (304)
T cd05101 97 YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENNV 175 (304)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCCc
Confidence 99999999999999986421 235788999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++...... ...+++.|+|||++.+..++.++||||||+++|||++ |..|+..........
T Consensus 176 ~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~----- 250 (304)
T cd05101 176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----- 250 (304)
T ss_pred EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH-----
Confidence 9999999998654321 2234578999999988889999999999999999998 666665432222111
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+........+..++..+.+++.+||..+|.+|||+.++++.|+++...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 251 LLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1111112223445678899999999999999999999999999887654
No 171
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.4e-41 Score=322.96 Aligned_cols=247 Identities=18% Similarity=0.247 Sum_probs=201.1
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+.+.||+|+||.||++. ..+++.||||.+....... ...+.+|+.++++++|+||+.+++.+.+.+..++||||+
T Consensus 3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05630 3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 82 (285)
T ss_pred eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEec
Confidence 455678999999999999 4568899999987543222 245778999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---SY 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~~ 209 (488)
+|++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ..
T Consensus 83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05630 83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 161 (285)
T ss_pred CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence 9999999886544456999999999999999999999999 9999999999999999999999999987654332 34
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.|+..|+|||++.+..++.++|||||||++|+|++|..||........ .......... .....+...++++.+|+.+|
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05630 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVKE-VQEEYSEKFSPDARSLCKML 239 (285)
T ss_pred CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHHHhhhhh-hhhhcCccCCHHHHHHHHHH
Confidence 678999999999988999999999999999999999998864321100 0001111111 11123344567899999999
Q ss_pred ccCCCCCCCC-----HHHHHHH
Q 011349 290 LQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps-----~~~il~~ 306 (488)
|+.||++||| +.++++|
T Consensus 240 l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 240 LCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred hhcCHHHccCCCCCchHHHHcC
Confidence 9999999999 8899986
No 172
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.4e-41 Score=322.03 Aligned_cols=252 Identities=19% Similarity=0.281 Sum_probs=203.8
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+++.+.||+|+||.||+|... ....|++|.+...... ..+.+.+|+.+++.++||||+++++.+...+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 356788899999999999842 2356899988754422 245788999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee
Q 011349 129 AEFMPNETLSKHLFHW----------------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~----------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill 186 (488)
|||+.+++|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+|||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill 160 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLV 160 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEE
Confidence 9999999999987531 1235889999999999999999999999 9999999999999
Q ss_pred cCCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhc
Q 011349 187 DQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRG 259 (488)
Q Consensus 187 ~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~ 259 (488)
++++.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|||+| |..|+........
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-- 238 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL-- 238 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH--
Confidence 999999999999987653321 2234678999999988889999999999999999999 8877754322211
Q ss_pred cccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 260 KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
............+...+.++.+++.+||+.+|++||++.++++.|+.+..+
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 239 ---FNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred ---HHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 111122222233445668899999999999999999999999999987653
No 173
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.5e-41 Score=320.21 Aligned_cols=247 Identities=17% Similarity=0.177 Sum_probs=200.2
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+++++.||.|+||.||+|... ++..+++|.+........+.+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 467788999999999999954 5788999998765544456789999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYS 210 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~ 210 (488)
++|..++.. ...++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....
T Consensus 87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999888753 3457999999999999999999999999 999999999999999999999999998754332 2346
Q ss_pred cccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 211 TNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 211 ~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
+++.|+|||++. +..++.++|||||||++|||++|++|+................ ......+...+.++.++
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l 241 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE---PPTLAQPSRWSSEFKDF 241 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC---CCCCCCccccCHHHHHH
Confidence 789999999984 3457889999999999999999998875432111100000000 00112233456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+||+.+|.+||++.+++.+-
T Consensus 242 i~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 242 LKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred HHHHccCChhhCcCHHHHhcCC
Confidence 9999999999999999998773
No 174
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.2e-40 Score=314.66 Aligned_cols=243 Identities=28% Similarity=0.390 Sum_probs=202.6
Q ss_pred ccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+.||+|+||.||+|.... +..|+||.++...... .+.+.+|++.++.++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 357999999999999543 7889999998765333 57899999999999999999999999998999999999999
Q ss_pred CChhhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 135 ETLSKHLFHWE-------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 135 gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
++|.+++.... ...+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEccccccccccccc
Confidence 99999997531 367999999999999999999999999 999999999999999999999999999876543
Q ss_pred -----CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....++..|+|||.+.+..++.++|||||||++|||++ |..|+......... ..+........+...+.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 234 (262)
T cd00192 160 YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVL-----EYLRKGYRLPKPEYCPD 234 (262)
T ss_pred ccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHHcCCCCCCCccCCh
Confidence 23456789999999988889999999999999999999 57776544221111 11111122234445678
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
++.+++.+||..+|.+|||+.+++++|+
T Consensus 235 ~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 235 ELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 9999999999999999999999999874
No 175
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.7e-41 Score=318.23 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCceEEEEEeC-CC---cEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-ED---RWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+++.+.||+|+||.||+|... ++ ..||||++..... .....|..|+.+++.++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 34577888999999999999953 33 3699999875431 2245799999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS 208 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 208 (488)
|||+++++|.+++.. ..+.+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 84 TEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999999999864 3456899999999999999999999999 99999999999999999999999999875543211
Q ss_pred -------cc--cccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 209 -------YS--TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 209 -------~~--~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
.. .+..|+|||.+.+..++.++|||||||++|||++ |..|+......... ..+........+..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~-----~~i~~~~~~~~~~~~ 236 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-----NAIEQDYRLPPPMDC 236 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHH-----HHHHcCCcCCCcccC
Confidence 11 1347999999998899999999999999999887 88777543221111 111111122233456
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+..+.+++.+||..+|.+||++.+++..|+.+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 77899999999999999999999999998764
No 176
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7e-41 Score=318.61 Aligned_cols=244 Identities=14% Similarity=0.185 Sum_probs=196.7
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecC------CeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEG------EERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~------~~~~lv 128 (488)
.+.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.++.++ +|+||+++++++... ...++|
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv 87 (272)
T cd06637 9 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 87 (272)
T ss_pred hHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEE
Confidence 5667789999999999994 568889999987554 3456789999999999 699999999998653 458999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
|||+.+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~ 166 (272)
T cd06637 88 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 166 (272)
T ss_pred EEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccccc
Confidence 99999999999987544567999999999999999999999999 99999999999999999999999999876532
Q ss_pred -CCccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 206 -GKSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 206 -~~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
.....|++.|+|||++.+ ..++.++|||||||++|||++|+.|+.......... ...............+
T Consensus 167 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 242 (272)
T cd06637 167 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKSKKWS 242 (272)
T ss_pred cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH----HHhcCCCCCCCCCCcC
Confidence 224567889999999863 457889999999999999999998875432111100 0011111111223456
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.+|+.+||..+|.+|||+.+++.+
T Consensus 243 ~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 243 KKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 789999999999999999999999875
No 177
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.1e-41 Score=319.95 Aligned_cols=247 Identities=21% Similarity=0.319 Sum_probs=199.6
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+++.||+|+||.||+|.+. .+..||+|.+...... ....+.+|+.+++.++|+||+++++++.+....++|
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 87 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFIL 87 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEE
Confidence 367788899999999999954 3567999988754422 234689999999999999999999999988899999
Q ss_pred EecCCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeeccCCCc
Q 011349 129 AEFMPNETLSKHLFHWEN-----QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLM 200 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla 200 (488)
|||++|++|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++
T Consensus 88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~ 166 (277)
T cd05036 88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMA 166 (277)
T ss_pred EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCccc
Confidence 999999999999864321 25899999999999999999999999 99999999999998654 5899999999
Q ss_pred ccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCC
Q 011349 201 KNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 201 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+...... ....+..|+|||++.+..++.++|||||||++|||++ |..||........ ...+.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~-----~~~~~~~~~~~ 241 (277)
T cd05036 167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV-----MEFVTGGGRLD 241 (277)
T ss_pred cccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHcCCcCC
Confidence 8653321 1222467999999998899999999999999999997 8777654322211 11111112223
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+...+..+.+++.+||+.+|++|||+.+++++|.
T Consensus 242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 44556788999999999999999999999999985
No 178
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.6e-41 Score=335.12 Aligned_cols=248 Identities=17% Similarity=0.223 Sum_probs=195.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCC-----eeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE-----ERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~l 127 (488)
+.+++.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+ ..++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 36778899999999999994 578999999986532 123457889999999999999999999998766 7899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+. ++|.+.+. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 82 VTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred Eeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 999996 68888775 4567999999999999999999999999 999999999999999999999999998764332
Q ss_pred ----CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc--------c----------cc
Q 011349 207 ----KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------N----------FL 263 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------~----------~~ 263 (488)
....+|+.|+|||.+.+. .++.++|||||||++|||++|+.||........... . ..
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 123568899999999874 478999999999999999999998865421110000 0 00
Q ss_pred c-ccccccC-------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 264 M-LMDSCLE-------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 264 ~-~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
. +...... .......+.++.+|+.+||+.||.+|||+.+++.|-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 0 0000000 011223467889999999999999999999999873
No 179
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=9.1e-41 Score=317.80 Aligned_cols=248 Identities=23% Similarity=0.301 Sum_probs=195.7
Q ss_pred cccccCCCCCCceEEEEEeCC-Cc--EEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecC------Cee
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE-DR--WIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EER 125 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~ 125 (488)
.+.+.||+|+||.||+|.... +. .||||.++.... ...+.+.+|+.+++.++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 356778999999999999544 33 589999876432 2245788999999999999999999987432 246
Q ss_pred eEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 126 LLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
++||||+++|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||+++++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCccc
Confidence 8999999999999887421 2345899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCC
Q 011349 202 NSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 202 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
...... ...+++.|++||.+.+..++.++|||||||++|||++ |..|+......... ..+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~ 235 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIY-----DYLRQGNRLKQ 235 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCCCCCC
Confidence 654322 2234678999999998889999999999999999999 67776543221110 01111111122
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 236 PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 345567899999999999999999999999998764
No 180
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.4e-41 Score=318.00 Aligned_cols=247 Identities=17% Similarity=0.169 Sum_probs=199.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.+.||+|+||.||+|. ..+++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++||||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 34677788999999999999 45688999999876654445678899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
+++|.+++. ..+.+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ...
T Consensus 90 ~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06645 90 GGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF 166 (267)
T ss_pred CCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccc
Confidence 999999986 4457999999999999999999999999 999999999999999999999999998754322 244
Q ss_pred ccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-cccccccccCCCCChhhHHHHHHH
Q 011349 210 STNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-FLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 210 ~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
.|+..|+|||++. ...++.++|||||||++|+|++|..|+............ ......+... .....+..+.++
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 244 (267)
T cd06645 167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFHHF 244 (267)
T ss_pred cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHHHH
Confidence 6789999999974 456888999999999999999999887543211100000 0000001000 011245678999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||..+|++|||+.+++++
T Consensus 245 i~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 245 VKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHccCCchhCcCHHHHhcC
Confidence 999999999999999999875
No 181
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=7.1e-41 Score=321.35 Aligned_cols=249 Identities=18% Similarity=0.183 Sum_probs=194.1
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhc---CCCCCcccccceec-----CCe
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLL---RSERLVNLIGCCCE-----GEE 124 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~~~~~~~~-----~~~ 124 (488)
|.+++.||+|+||.||+|. ..+++.||+|.++..... ....+.+|+.+++.+ +||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 5678889999999999999 457899999998754322 234566788877766 69999999998764 245
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred EEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 899999997 58988886544556999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------ccccc-----
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFLML----- 265 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~~~~~----- 265 (488)
.. ....+|..|+|||++.+..++.++|||||||++|+|++|++||........... .+...
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07863 160 CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR 239 (288)
T ss_pred CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccc
Confidence 33 234678899999999988899999999999999999999988754322110000 00000
Q ss_pred --cccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 --MDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 --~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... .......+..+.+++.+||+.||++|||+.+++.|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 240 GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 01112345778999999999999999999999875
No 182
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7e-41 Score=315.51 Aligned_cols=245 Identities=17% Similarity=0.191 Sum_probs=203.5
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+++.||.|+||.||++.. .++..||+|.++... ....+.+.+|+.+++.++|+||+++++.+.+++..++||||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 46788899999999999994 468889999986533 2335678899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
+++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++...... ...
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (255)
T cd08219 82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY 160 (255)
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence 999999886545566899999999999999999999999 999999999999999999999999998765432 234
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.+++.|+|||++.+..++.++||||||+++|+|++|..||........... .. .......+...+..+.+++.+|
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~li~~~ 235 (255)
T cd08219 161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK----VC-QGSYKPLPSHYSYELRSLIKQM 235 (255)
T ss_pred cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH----Hh-cCCCCCCCcccCHHHHHHHHHH
Confidence 678899999999988899999999999999999999998865432211111 00 1111123344567899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|..||++|||+.+++..
T Consensus 236 l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 236 FKRNPRSRPSATTILSR 252 (255)
T ss_pred HhCCcccCCCHHHHhhc
Confidence 99999999999999864
No 183
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1e-40 Score=314.73 Aligned_cols=242 Identities=23% Similarity=0.282 Sum_probs=197.6
Q ss_pred cCCCCCCceEEEEEeCC--Cc--EEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLVDE--DR--WIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|++|.||+|.+.+ ++ .||||.+..... ...+.+.+|+.++++++||||+++++.+.. ...++||||++++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 57999999999998533 33 699999987765 345689999999999999999999999988 8899999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-------c
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-------S 208 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~ 208 (488)
+|.+.+.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 9999997533256899999999999999999999999 9999999999999999999999999988664421 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||++.+..++.++|||||||++|||+| |..|+........... ... .......+...+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKK-IDK---EGERLERPEACPQDIYNVML 235 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHh---cCCcCCCCccCCHHHHHHHH
Confidence 345678999999998889999999999999999999 8887643321111000 000 11111223345678999999
Q ss_pred HhccCCCCCCCCHHHHHHHhc
Q 011349 288 RCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~ 308 (488)
+||..+|++|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 236 QCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHCCCCcccCCCHHHHHHHhc
Confidence 999999999999999999874
No 184
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-41 Score=324.98 Aligned_cols=246 Identities=24% Similarity=0.363 Sum_probs=212.6
Q ss_pred cccCCCCCCceEEEEEeCC---Cc--EEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 59 VSEHGEKAPNVVYKGLVDE---DR--WIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~---~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
-+.||.|.||.||+|.+.+ |. .||||..+.+. ..+.+.|..|+.+|+.++|||||+++|+|.+ ...+||||++
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~ 472 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELA 472 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecc
Confidence 3568999999999999432 33 48999998754 3446789999999999999999999999964 6789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcccc-
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST- 211 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~- 211 (488)
+-|.|..+|.. +...|+......++.||+.||.|||+.. +|||||-..|||+.+.-.+||+|||+++...+..-+..
T Consensus 473 ~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS 550 (974)
T KOG4257|consen 473 PLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS 550 (974)
T ss_pred cchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence 99999999975 4456999999999999999999999998 99999999999999999999999999998877653332
Q ss_pred ----ccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 212 ----NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 212 ----t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
.+-|||||.+....++.+||||-|||++||++. |..||.+ +.+.+....+...-+.+.|+.||+.+..|+
T Consensus 551 ~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg-----vkNsDVI~~iEnGeRlP~P~nCPp~LYslm 625 (974)
T KOG4257|consen 551 RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG-----VKNSDVIGHIENGERLPCPPNCPPALYSLM 625 (974)
T ss_pred ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc-----ccccceEEEecCCCCCCCCCCCChHHHHHH
Confidence 357999999999999999999999999999876 7777765 445555556666677788999999999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+||+.+|.+||++.++...|..+..
T Consensus 626 skcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 626 SKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHHhccCcccCCcHHHHHHHHHHHHH
Confidence 99999999999999999998876543
No 185
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=8.8e-41 Score=326.83 Aligned_cols=249 Identities=19% Similarity=0.148 Sum_probs=196.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+|.+++.||+|+||.||++.. .+++.||||+++... ....+.+.+|+.++..++|+||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 467889999999999999994 468899999986422 1234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++||+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred cCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 9999999999864 2456899999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 --SYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...||+.|+|||++.+ ..++.++|||||||++|||++|+.||............... .............+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~ 238 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH-KEHFQFPPDVTDVSE 238 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcC-CCcccCCCccCCCCH
Confidence 2358999999999863 45788999999999999999999988654221111100000 000000111123567
Q ss_pred HHHHHHHHhccCCCC--CCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPR--ERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~--~Rps~~~il~~ 306 (488)
.+.+++.+|+..++. .||++.+++.|
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 239 EAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 889999998865433 47899999998
No 186
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.3e-40 Score=314.56 Aligned_cols=247 Identities=22% Similarity=0.220 Sum_probs=190.8
Q ss_pred ccCCCCCCceEEEEEeCC---CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 60 SEHGEKAPNVVYKGLVDE---DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
+.||+|+||.||+|...+ +..+|+|.++..... ....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 357999999999998543 457999998765422 2347889999999999999999999999888999999999999
Q ss_pred ChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 136 TLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 136 sL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 9999986422 235677888899999999999999999 9999999999999999999999999987543321
Q ss_pred -ccccccCCCCccccccC-------CcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 208 -SYSTNLAFTPPEYLRTG-------RVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~-------~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
...++..|+|||++.+. .++.++||||||+++|||++ |..||......................+......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL 239 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence 23456789999998642 35789999999999999996 9888754322211111111111111112222234
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+..+.+++.+|| .+|++|||+.+|+..|+
T Consensus 240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 240 SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 577899999999 68999999999998874
No 187
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=7.7e-41 Score=319.60 Aligned_cols=244 Identities=20% Similarity=0.249 Sum_probs=197.1
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++++.||+|+||.||+|. ..+++.||||++..... .....+.+|+.++.+++||||+++++++...+..++||||++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 82 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence 4677889999999999999 45788999999875432 224568899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Ccccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYST 211 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~ 211 (488)
+++|..+. .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....+
T Consensus 83 ~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (279)
T cd06619 83 GGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVG 155 (279)
T ss_pred CCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCC
Confidence 99996542 3788999999999999999999999 999999999999999999999999998765432 34578
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh--c-cccccccccccCCCCChhhHHHHHHHHHH
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR--G-KNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
|..|+|||++.+..++.++|||||||++|+|++|+.||......... . ...................++++.+++.+
T Consensus 156 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (279)
T cd06619 156 TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQ 235 (279)
T ss_pred ChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHH
Confidence 89999999999888999999999999999999999887542111000 0 00000011111111112345789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||+.+|++||++++++.+
T Consensus 236 ~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 236 CMRKQPKERPAPENLMDH 253 (279)
T ss_pred HhhCChhhCCCHHHHhcC
Confidence 999999999999999987
No 188
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.1e-41 Score=328.74 Aligned_cols=253 Identities=21% Similarity=0.292 Sum_probs=199.3
Q ss_pred cccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecC-Cee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEG-EER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~~~ 125 (488)
.+.+.+.||+|+||.||+|.. .+++.||||+++..... ....+.+|+.++.++ +||||+++++++... ...
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 457889999999999999973 34678999999765422 235688999999999 689999999988654 467
Q ss_pred eEEEecCCCCChhhhhccCC------------------------------------------------------------
Q 011349 126 LLVAEFMPNETLSKHLFHWE------------------------------------------------------------ 145 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 145 (488)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999886321
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------ccccccC
Q 011349 146 -----NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTNLA 214 (488)
Q Consensus 146 -----~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~~ 214 (488)
...+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....... ...++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 246 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence 124788899999999999999999999 9999999999999999999999999987653221 2234567
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
|+|||.+.+..++.++|||||||++|+|++ |..|++....... ....+........+...++++.+++.+||+.+
T Consensus 247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~ 322 (343)
T cd05103 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 322 (343)
T ss_pred eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH----HHHHHhccCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999988889999999999999999997 7777654321110 01111111111222334568999999999999
Q ss_pred CCCCCCHHHHHHHhchhhc
Q 011349 294 PRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 294 p~~Rps~~~il~~l~~~~~ 312 (488)
|++|||+.+|+++|+.+..
T Consensus 323 p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 323 PSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999988754
No 189
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.9e-40 Score=313.48 Aligned_cols=247 Identities=21% Similarity=0.309 Sum_probs=202.4
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.++||+|+||.||+|....+..||+|.+.... ...+.+.+|+.++++++|+||+++++++.. ...++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAK 84 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCC
Confidence 356788899999999999997777889999987543 234678999999999999999999999877 778999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 163 (260)
T cd05073 85 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 163 (260)
T ss_pred CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCC
Confidence 99999997545567899999999999999999999999 9999999999999999999999999987654322 12
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||++.+..++.++|||||||++|+++| |..|+.......... .+........+...+.++.+++.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~ 238 (260)
T cd05073 164 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR-----ALERGYRMPRPENCPEELYNIMMR 238 (260)
T ss_pred cccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHhCCCCCCCcccCCHHHHHHHHH
Confidence 34567999999998889999999999999999999 777765432221111 111111112233456789999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|++||++.+++..|+.
T Consensus 239 ~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 239 CWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999998874
No 190
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-40 Score=320.85 Aligned_cols=252 Identities=17% Similarity=0.251 Sum_probs=207.3
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+.....+.+++.||.|++|.||+|. ..+++.||||.+........+.+.+|+.+++.++||||+++++++...+..+
T Consensus 13 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 13 SIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELF 92 (296)
T ss_pred hcCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEE
Confidence 333334457888999999999999998 4678999999997665555678899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|..++. ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 93 VVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 9999999999999884 346899999999999999999999999 999999999999999999999999998765432
Q ss_pred C----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 K----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
. ...++..|+|||.+.+..++.++|||||||++|+|++|+.||........... .. .........+...++.+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 245 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IA--TNGTPELQNPEKLSPIF 245 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HH--hcCCcccCCcccCCHHH
Confidence 2 34578899999999988899999999999999999999988765322110000 00 00011112233456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+||..||.+||++.+++.+
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhhC
Confidence 999999999999999999999987
No 191
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.3e-40 Score=314.98 Aligned_cols=246 Identities=21% Similarity=0.299 Sum_probs=192.2
Q ss_pred cCCCCCCceEEEEEeC----CCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCccccccee-cCCeeeEEEecCCC
Q 011349 61 EHGEKAPNVVYKGLVD----EDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCC-EGEERLLVAEFMPN 134 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~ 134 (488)
.||+|+||.||+|... ....||||.+.... ....+.+.+|+.+++.++||||+++++++. .++..++||||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 5799999999999843 23579999986432 223457889999999999999999999775 45568999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------- 207 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------- 207 (488)
++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++......
T Consensus 82 ~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 999999864 2345778888999999999999999999 9999999999999999999999999987543221
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...++..|+|||.+.+..++.++|||||||++|||++|+.|+....... .....+........+...+..+.+++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li 235 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF----DITVYLLQGRRLLQPEYCPDPLYEVM 235 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHhcCCCCCCCCcCCHHHHHHH
Confidence 2234678999999988889999999999999999999655443221110 00001111111122334467899999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+||..+|++||++.+++..|+.+..
T Consensus 236 ~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 236 LSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred HHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 99999999999999999999987653
No 192
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=9.7e-41 Score=318.51 Aligned_cols=248 Identities=22% Similarity=0.353 Sum_probs=201.4
Q ss_pred cccccccCCCCCCceEEEEEeCC------CcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE------DRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+++.||+|+||.||+|.... +..||+|.+..... .....+.+|+.++..++||||+++++++......++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~ 86 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLV 86 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEE
Confidence 35678889999999999998532 36799999875432 223468899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 128 VAEFMPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
||||+++++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~ 165 (277)
T cd05032 87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCccc
Confidence 999999999999986421 234788999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCC
Q 011349 200 MKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 200 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
++..... ....++..|+|||.+.+..++.++|||||||++||++| |..|+.......... .+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~ 240 (277)
T cd05032 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK-----FVIDGGHL 240 (277)
T ss_pred chhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH-----HHhcCCCC
Confidence 8765332 22345678999999988889999999999999999998 777765432221111 11111122
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
..+...+..+.+++.+||..+|++|||+.++++.|+
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 241 DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 334455788999999999999999999999999876
No 193
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=327.10 Aligned_cols=249 Identities=19% Similarity=0.298 Sum_probs=217.2
Q ss_pred ccccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 58 IVSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
+..+||-|.||.||.|.|+. .-.||||.++.+. -..++|++|+.+|+.++|||+|+++|+|.....+|||+|||..|+
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGN 349 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGN 349 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCcc
Confidence 45689999999999999765 6679999998776 456899999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--cccc---
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--SYST--- 211 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~~~~--- 211 (488)
|.++|++..+..++.-..+.++.||..|+.||..++ +|||||-..|+|+.++..+|++||||++.+.... ...|
T Consensus 350 LLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKF 428 (1157)
T KOG4278|consen 350 LLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKF 428 (1157)
T ss_pred HHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccC
Confidence 999998877778888899999999999999999999 9999999999999999999999999999876543 2223
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCC-CCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK-HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
.+-|.|||-+....++.|+|||+|||+|||+.|.. .|+++.. ..++-.++....+..-|..||+.+.+|+..||
T Consensus 429 PIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW 503 (1157)
T KOG4278|consen 429 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYGLLEKGYRMDGPEGCPPKVYELMRACW 503 (1157)
T ss_pred cccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HHHHHHHHhccccccCCCCCCHHHHHHHHHHh
Confidence 47899999999999999999999999999998854 5666532 23334455556666778889999999999999
Q ss_pred cCCCCCCCCHHHHHHHhchhhcc
Q 011349 291 QYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+|.+||++.++-+.++.+...
T Consensus 504 ~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 504 NWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred cCCcccCccHHHHHHHHHHHhcc
Confidence 99999999999999999876543
No 194
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.7e-40 Score=320.00 Aligned_cols=253 Identities=19% Similarity=0.257 Sum_probs=199.2
Q ss_pred cccccccCCCCCCceEEEEEeCC-----------------CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccc
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE-----------------DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLI 116 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~ 116 (488)
.+.++++||+|+||.||+|.... +..||+|.+...... ....+.+|++++++++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 56788999999999999988432 245899998765422 345788999999999999999999
Q ss_pred cceecCCeeeEEEecCCCCChhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec
Q 011349 117 GCCCEGEERLLVAEFMPNETLSKHLFHWE---------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187 (488)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~ 187 (488)
+++..++..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeec
Confidence 99999899999999999999999986422 126899999999999999999999999 99999999999999
Q ss_pred CCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh--CCCCCCcchhhhh-h
Q 011349 188 QDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--GKHIPPSHALDLI-R 258 (488)
Q Consensus 188 ~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t--g~~p~~~~~~~~~-~ 258 (488)
.++.++|+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..|+........ .
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05051 165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIE 244 (296)
T ss_pred CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHH
Confidence 99999999999987653322 2344678999999988889999999999999999998 4444432211110 0
Q ss_pred c-cccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 259 G-KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 259 ~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
. ...............+...+.++.+++.+||+.||.+|||+.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 245 NAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 0 0000000011111223345678999999999999999999999999886
No 195
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-40 Score=330.19 Aligned_cols=248 Identities=15% Similarity=0.184 Sum_probs=194.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCC------e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE------E 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 124 (488)
..|.+++.||+|+||.||++.. .+|..||||++.... ......+.+|+.+++.++||||+++++++.... .
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 4567889999999999999994 568999999997542 223457889999999999999999999886543 4
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||++ ++|...+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 101 VYLVMELMD-ANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred eEEEEeCCC-cCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 799999997 56666663 34889999999999999999999999 9999999999999999999999999997654
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-------c--------------
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------K-------------- 260 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-------~-------------- 260 (488)
.. ....+|+.|+|||.+.+..++.++|||||||++|+|+||+.||.......... .
T Consensus 175 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (359)
T cd07876 175 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVR 254 (359)
T ss_pred cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 32 23567899999999999899999999999999999999999886432100000 0
Q ss_pred ------------ccccccccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 261 ------------NFLMLMDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 261 ------------~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.+.+....... .......++.+.+|+.+||..||++|||+.+++.|-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 255 NYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 00000000000 001112346789999999999999999999999974
No 196
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.1e-40 Score=313.96 Aligned_cols=246 Identities=24% Similarity=0.353 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
..+.+.+.||+|+||.||++.. +++.||+|.++... ....+.+|+.+++.++|||++++++++.. +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCC
Confidence 4567888999999999999975 67789999986543 34678999999999999999999998865 45799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Cccccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTN 212 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t 212 (488)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .....+
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP 160 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCC
Confidence 999999997544556899999999999999999999999 999999999999999999999999998765432 223345
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
..|+|||.+.+..++.++|||||||++|||++ |+.|+......... ...........+...+..+.+++.+||.
T Consensus 161 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (254)
T cd05083 161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK-----ECVEKGYRMEPPEGCPADVYVLMTSCWE 235 (254)
T ss_pred ceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHH-----HHHhCCCCCCCCCcCCHHHHHHHHHHcC
Confidence 68999999988889999999999999999998 88776544322111 1111112222334557889999999999
Q ss_pred CCCCCCCCHHHHHHHhch
Q 011349 292 YEPRERPNAKSLVASLTP 309 (488)
Q Consensus 292 ~dp~~Rps~~~il~~l~~ 309 (488)
.+|.+||++.+++..|+.
T Consensus 236 ~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 236 TEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CChhhCcCHHHHHHHHcc
Confidence 999999999999998763
No 197
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=9.9e-41 Score=326.19 Aligned_cols=248 Identities=19% Similarity=0.212 Sum_probs=194.0
Q ss_pred ccccCCCC--CCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 58 IVSEHGEK--APNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 58 ~~~~lG~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+++.||+| +||+||++. ..+|+.||||++....... .+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45678998 788999998 5678999999997654222 346788999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC------
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------ 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------ 206 (488)
++|+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++++||+........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 9999999986544456999999999999999999999999 999999999999999999999999865432211
Q ss_pred -----CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh----cccccccccc-------
Q 011349 207 -----KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----GKNFLMLMDS------- 268 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~----~~~~~~~~~~------- 268 (488)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ........+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 12245678999999976 45889999999999999999999988643211100 0000000000
Q ss_pred -----------------------------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 -----------------------------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 -----------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..........++.+.+++.+||+.||++|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00001122345689999999999999999999999986
No 198
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.1e-40 Score=318.32 Aligned_cols=242 Identities=17% Similarity=0.289 Sum_probs=200.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+++.||+|+||.||+|.. .++..||+|.+..... ...+.+.+|+.++++++||||+++++++..+...++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 34566789999999999984 4688899999875432 224578999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 209 (488)
+++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... ..
T Consensus 86 ~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06642 86 GGSALDLLK---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence 999999884 456899999999999999999999999 9999999999999999999999999987654332 23
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.++..|+|||++.+..++.++|||||||++|||+||..|+........ ...+............+..+.+++.+|
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06642 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LFLIPKNSPPTLEGQYSKPFKEFVEAC 236 (277)
T ss_pred cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----HhhhhcCCCCCCCcccCHHHHHHHHHH
Confidence 567899999999988899999999999999999999987653211111 111111112223334567899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|..+|++||++.+++.+
T Consensus 237 l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 237 LNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCCcccCcCHHHHHHh
Confidence 99999999999999997
No 199
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.1e-40 Score=319.10 Aligned_cols=254 Identities=24% Similarity=0.330 Sum_probs=204.0
Q ss_pred cccccccCCCCCCceEEEEEeC-----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceec--CCeee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~ 126 (488)
.+.+++.||+|+||.||+|.+. ++..||||+++..... ..+.+.+|+++++.++|+||+++++++.. +...+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4567788999999999999853 3678999999866533 35689999999999999999999998877 55789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 85 lv~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05038 85 LIMEYLPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPED 162 (284)
T ss_pred EEEecCCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence 99999999999999964 2335999999999999999999999999 999999999999999999999999999876532
Q ss_pred C-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh----------ccccccccccc
Q 011349 207 K-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----------GKNFLMLMDSC 269 (488)
Q Consensus 207 ~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~----------~~~~~~~~~~~ 269 (488)
. ...++..|++||.+.+..++.++||||||++++||+||..|+......... .......+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05038 163 KDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG 242 (284)
T ss_pred CcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC
Confidence 1 123345699999998888999999999999999999999876432211100 00011111111
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.....+..++.++.+++.+||..+|.+|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 243 ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 22223345567899999999999999999999999999876
No 200
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.7e-40 Score=312.05 Aligned_cols=242 Identities=26% Similarity=0.406 Sum_probs=199.2
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
+.||.|+||.||++....++.||+|++...... ....+.+|++++++++|+||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 357999999999999766899999998765533 3457999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------ccccc
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTN 212 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t 212 (488)
+++.. ....+++..+..++.+++.||.|||+++ ++||||||+||+++.++.++|+|||++....... ....+
T Consensus 81 ~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (251)
T cd05041 81 TFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP 158 (251)
T ss_pred HHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence 99864 2346899999999999999999999999 9999999999999999999999999988654221 12235
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
..|+|||.+.++.++.++|||||||++|||+| |..|+......... ..+........+...+..+.+++.+||.
T Consensus 159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~ 233 (251)
T cd05041 159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR-----ERIESGYRMPAPQLCPEEIYRLMLQCWA 233 (251)
T ss_pred eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH-----HHHhcCCCCCCCccCCHHHHHHHHHHhc
Confidence 67999999988889999999999999999999 66666443221111 1111111222344567889999999999
Q ss_pred CCCCCCCCHHHHHHHhc
Q 011349 292 YEPRERPNAKSLVASLT 308 (488)
Q Consensus 292 ~dp~~Rps~~~il~~l~ 308 (488)
.+|.+|||+.++++.|+
T Consensus 234 ~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 234 YDPENRPSFSEIYNELQ 250 (251)
T ss_pred cChhhCcCHHHHHHHhh
Confidence 99999999999999885
No 201
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.8e-40 Score=312.91 Aligned_cols=246 Identities=23% Similarity=0.336 Sum_probs=201.3
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++.+.+.||.|+||.||+|.+.++..+|+|.+.... .....+.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4567888999999999999997678889999987543 345679999999999999999999999998899999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 83 ~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05112 83 HGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160 (256)
T ss_pred CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence 9999998864 2356899999999999999999999999 9999999999999999999999999987553321 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||.+.++.++.++||||||+++|||++ |..|+.......... .+........+...+..+.+|+.
T Consensus 161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~ 235 (256)
T cd05112 161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVE-----TINAGFRLYKPRLASQSVYELMQ 235 (256)
T ss_pred CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH-----HHhCCCCCCCCCCCCHHHHHHHH
Confidence 234568999999998889999999999999999998 777765432111111 00111111122234678999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 011349 288 RCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l 307 (488)
+||..+|++|||+.++++.|
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 236 HCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHcccChhhCCCHHHHHHhh
Confidence 99999999999999999886
No 202
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.1e-40 Score=316.51 Aligned_cols=253 Identities=17% Similarity=0.214 Sum_probs=202.9
Q ss_pred HHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCe
Q 011349 46 LRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124 (488)
Q Consensus 46 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 124 (488)
++.++++++...+ ||+|+||.||+|. ..++..||+|.+........+.+.+|+.++++++|+||+++++++..++.
T Consensus 3 ~~~~~~~~~~~~~---lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (268)
T cd06624 3 YEYEYDENGERVV---LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF 79 (268)
T ss_pred cccccccCCceEE---EecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE
Confidence 4456777765554 5999999999999 45688899999887665556689999999999999999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCcc
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPM--KWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMK 201 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~ 201 (488)
.++|+||+++++|.+++... ...+ ++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.++|+|||++.
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999999998642 2345 88899999999999999999999 999999999999976 6799999999987
Q ss_pred cCCCC----CccccccCCCCccccccCC--cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 202 NSRDG----KSYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 202 ~~~~~----~~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
..... ....+++.|+|||.+.+.. ++.++||||||+++|+|++|+.|+.......... ...........++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~ 234 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM---FKVGMFKIHPEIP 234 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH---hhhhhhccCCCCC
Confidence 65322 2345788999999986643 7889999999999999999998875431111000 0000001122344
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...++++.+++.+||+.+|.+|||+.+++.+
T Consensus 235 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 4567889999999999999999999999876
No 203
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.5e-40 Score=322.11 Aligned_cols=251 Identities=20% Similarity=0.254 Sum_probs=200.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+++++.||+|+||.||++.. .++..||+|.++..... ...++.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 357788899999999999994 46888999998754322 2346889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC--Ccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~ 209 (488)
+|++|.+++.. ...+++..+..++.||+.||.|||+. + ++|+||||+|||+++++.++|+|||++...... ...
T Consensus 82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (308)
T cd06615 82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 158 (308)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccccC
Confidence 99999999973 46689999999999999999999984 6 999999999999999999999999998765432 345
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc---cccccc---------------------
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG---KNFLML--------------------- 265 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~---~~~~~~--------------------- 265 (488)
.++..|+|||.+.+..++.++|||||||++|+|+||+.|+.......... ......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (308)
T cd06615 159 VGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238 (308)
T ss_pred CCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence 67899999999988889999999999999999999998875432111100 000000
Q ss_pred ----cccc---cCCCCC-hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 266 ----MDSC---LEGHFS-NDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 266 ----~~~~---~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+.. ..+..+ ...+.++.+++.+||..+|++|||+.+++.+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 0000 000111 124567999999999999999999999999843
No 204
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-40 Score=321.94 Aligned_cols=252 Identities=21% Similarity=0.319 Sum_probs=202.7
Q ss_pred ccccccCCCCCCceEEEEEeC--------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD--------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
+.+.+.||+|+||.||+|... ....||+|+++.... .....+.+|+.+++++ +||||+++++++...+..
T Consensus 14 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 93 (314)
T cd05099 14 LVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPL 93 (314)
T ss_pred eeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCce
Confidence 457788999999999999731 245699999875432 2245688999999999 699999999999988899
Q ss_pred eEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++||||+++|+|.+++.... ...+++.++..++.||+.||.|||+++ ++||||||+|||++.++.
T Consensus 94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~ 172 (314)
T cd05099 94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNV 172 (314)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCc
Confidence 99999999999999986421 245899999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|||++ |..|+......... .
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~-----~ 247 (314)
T cd05099 173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF-----K 247 (314)
T ss_pred EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH-----H
Confidence 9999999998654321 1123467999999988889999999999999999999 77776543221111 1
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+........+..++.++.+++.+||..+|++|||+.++++.|..+...
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 248 LLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 1111111223445677899999999999999999999999999988654
No 205
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.3e-40 Score=316.14 Aligned_cols=247 Identities=21% Similarity=0.295 Sum_probs=200.1
Q ss_pred cccccCCCCCCceEEEEEeC-CCc---EEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-EDR---WIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...+.||+|+||.||+|... ++. .+|||++..... ...+.+..|++++++++||||+++.+++...+..++||||
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (268)
T cd05063 8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEY 87 (268)
T ss_pred eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEc
Confidence 44567899999999999954 333 699999875532 2245789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc---
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 208 (488)
+++++|.+++.. ....+++.++..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 88 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 165 (268)
T cd05063 88 MENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY 165 (268)
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceecccccccce
Confidence 999999999864 3456899999999999999999999999 99999999999999999999999999876543211
Q ss_pred ----cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 209 ----YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 209 ----~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...+..|+|||++.+..++.++|||||||++|||+| |..|+........ ...+......+.+...+..+.
T Consensus 166 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~ 240 (268)
T cd05063 166 TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEV-----MKAINDGFRLPAPMDCPSAVY 240 (268)
T ss_pred eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHH-----HHHHhcCCCCCCCCCCCHHHH
Confidence 112357999999988889999999999999999998 8888754322111 111111122223345678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+++.+||+.+|++||++.++++.|+++
T Consensus 241 ~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 241 QLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999998765
No 206
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.5e-41 Score=324.12 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=198.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.++++||+|+||.||+|.. .+++.||||.++..... ....+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 4578899999999999999994 46888999998754422 234678999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
++ ++|.+++.. .+..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 86 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (309)
T cd07872 86 LD-KDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYS 162 (309)
T ss_pred CC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCccccc
Confidence 97 588887754 3445899999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------cccc--------cc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FLML--------MD 267 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~~~--------~~ 267 (488)
...+|+.|+|||.+.+ ..++.++|||||||++|+|+||+.||............ +... ..
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07872 163 NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYN 242 (309)
T ss_pred cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence 3456889999999865 46889999999999999999999888654321110000 0000 00
Q ss_pred -cccCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 -SCLEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 -~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.... ......+.++.+++.+||..||.+|||+.+++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 00000 0112346778999999999999999999999986
No 207
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.8e-40 Score=313.11 Aligned_cols=243 Identities=24% Similarity=0.347 Sum_probs=196.8
Q ss_pred ccCCCCCCceEEEEEeC-C---CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLVD-E---DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++||+|+||.||+|.+. . +..||+|.+...... ..+.+.+|+.+++.++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 36799999999999842 2 267999999866532 3457899999999999999999999875 5568999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcc-----
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY----- 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~----- 209 (488)
++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999973 347999999999999999999999999 999999999999999999999999998865433221
Q ss_pred --ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 210 --STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 210 --~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
.++..|+|||.+.+..++.++|||||||++|+|++ |..|+....... ....+........+..++..+.+++
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE-----VIAMLESGERLPRPEECPQEIYSIM 231 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH-----HHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 12457999999998889999999999999999998 887764432111 1111111112233445668899999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhh
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
.+||..+|.+||++.++++.|+.+.
T Consensus 232 ~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 232 LSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHhcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999999998653
No 208
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-41 Score=328.19 Aligned_cols=243 Identities=21% Similarity=0.300 Sum_probs=208.0
Q ss_pred ccccCCCCCCceEEEEEeCC--Cc--EEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 58 IVSEHGEKAPNVVYKGLVDE--DR--WIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.++||+|.||+|++|.|.. |+ .||||+++.+... ...+|.+|+.+|.+|+|+|++++||+..+ ....+|||++
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 45678999999999999643 44 4899999987755 56789999999999999999999999876 7789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcc---
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--- 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~--- 209 (488)
+.|+|.+.|++.....|.....-.++.||+.||.||.+++ +|||||-..|+|+-....|||+||||.+.+......
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 9999999998755667888999999999999999999999 999999999999999999999999999987655432
Q ss_pred ----ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCC-CCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 210 ----STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH-IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 210 ----~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
.....|+|||.++..+++.+||||+|||+||||+|+.. ||.+. ....+.+.++..-+..-+..|+.++.+
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-----~g~qIL~~iD~~erLpRPk~csedIY~ 346 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-----RGIQILKNIDAGERLPRPKYCSEDIYQ 346 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-----CHHHHHHhccccccCCCCCCChHHHHH
Confidence 22467999999999999999999999999999999664 54442 334445556655555667789999999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++..||..+|++|||+..|.+.+
T Consensus 347 imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 347 IMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHhccCCccccccHHHHHHhH
Confidence 99999999999999999997543
No 209
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-40 Score=323.51 Aligned_cols=254 Identities=20% Similarity=0.304 Sum_probs=204.1
Q ss_pred ccccccCCCCCCceEEEEEeC--------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD--------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
+.+.+.||+|+||.||+|... .+..||+|.++.... ...+.+.+|+.+++++ +||||+++++++...+..
T Consensus 14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 93 (334)
T cd05100 14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 93 (334)
T ss_pred eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCce
Confidence 578889999999999999732 123689999875432 2245789999999999 799999999999999999
Q ss_pred eEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++||||+++|+|.+++.... ...+++.++..++.||+.||.|||+++ ++||||||+|||++.++.
T Consensus 94 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~~ 172 (334)
T cd05100 94 YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDNV 172 (334)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCc
Confidence 99999999999999986421 235888999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|||++ |..|+......... .
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~ 247 (334)
T cd05100 173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-----K 247 (334)
T ss_pred EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH-----H
Confidence 9999999988654322 1223467999999998889999999999999999998 77766543222111 1
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
.+........+...+.++.+++.+||+.+|.+|||+.+++..|+.+.....
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 248 LLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 111112223344556789999999999999999999999999998876543
No 210
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.1e-40 Score=319.27 Aligned_cols=253 Identities=18% Similarity=0.250 Sum_probs=197.0
Q ss_pred cccccccCCCCCCceEEEEEeCC---------------CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccc
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE---------------DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGC 118 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~ 118 (488)
.+++.++||+|+||.||++.... ...||||.++..... ....+.+|++++++++|+||++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 56788999999999999987532 234899999765322 23468999999999999999999999
Q ss_pred eecCCeeeEEEecCCCCChhhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 119 CCEGEERLLVAEFMPNETLSKHLFHWE----------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 119 ~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
+...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||++++
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~ 164 (295)
T cd05097 86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGN 164 (295)
T ss_pred EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcC
Confidence 999999999999999999999885321 124788999999999999999999999 999999999999999
Q ss_pred CCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhC--CCCCCcchhhhhhc-
Q 011349 189 DGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG--KHIPPSHALDLIRG- 259 (488)
Q Consensus 189 ~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg--~~p~~~~~~~~~~~- 259 (488)
++.+||+|||++....... ...++..|+|||.+.++.++.++|||||||++++|+++ ..|+..........
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 244 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN 244 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence 9999999999987654322 12335689999999888899999999999999999984 44443321111100
Q ss_pred -cccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 260 -KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 260 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
...............+...+..+.+|+.+||+.+|++|||+.+|++.|.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 245 TGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0000000011111223345678999999999999999999999999875
No 211
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.7e-40 Score=314.09 Aligned_cols=247 Identities=20% Similarity=0.233 Sum_probs=188.4
Q ss_pred ccCCCCCCceEEEEEeCC---CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 60 SEHGEKAPNVVYKGLVDE---DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
++||+|+||.||+|...+ ...+|+|.+...... ....+.+|+.+++.++|+||+++++.+......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 357999999999997433 346888887654322 2346889999999999999999999999999999999999999
Q ss_pred ChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC------
Q 011349 136 TLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------ 206 (488)
Q Consensus 136 sL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------ 206 (488)
+|.+++.... ....++.....++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 9999986432 233567888999999999999999999 999999999999999999999999998754322
Q ss_pred CccccccCCCCcccccc-------CCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 207 KSYSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
....+++.|+|||++.. ..++.++|||||||++|||++ |..|+.........................+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence 12334677999998743 356789999999999999999 5555543321111111111111111122233455
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+..+.+++..|| .||++|||+++|++.|.
T Consensus 240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 240 SDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 678889999999 59999999999998863
No 212
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.4e-40 Score=314.05 Aligned_cols=242 Identities=18% Similarity=0.314 Sum_probs=200.1
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCCh---------HHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDS---------RQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
.+.+.||.|++|.||+|.. .+++.||+|.+........ +.+.+|+.++++++||||+++++++...+..+
T Consensus 3 ~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (267)
T cd06628 3 IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLN 82 (267)
T ss_pred cccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccE
Confidence 4566789999999999984 4688899999875543221 45889999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++.....
T Consensus 83 lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 83 IFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred EEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 9999999999999996 3466899999999999999999999999 999999999999999999999999998766421
Q ss_pred ----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 207 ----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 207 ----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
....++..|+|||.+.+..++.++|||||||++|+|++|+.||....... ...... .......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~-~~~~~~~~~ 234 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ----AIFKIG-ENASPEIPS 234 (267)
T ss_pred cccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH----HHHHHh-ccCCCcCCc
Confidence 12356789999999998889999999999999999999999886532111 001111 112223444
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+..+.+++.+||+.+|.+||++.+++++
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 235 NISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 567889999999999999999999999875
No 213
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.4e-40 Score=314.16 Aligned_cols=249 Identities=22% Similarity=0.286 Sum_probs=201.5
Q ss_pred cccccccCCCCCCceEEEEEeC-C---CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-E---DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+++.+.||+|+||.||+|... + +..||+|.++..... ..+.+.+|+.++.+++||||+++++++..++..++||
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVT 84 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 3467788999999999999843 2 337999998754322 2457899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS- 208 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~- 208 (488)
||+++++|.+++.. ....+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 85 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 85 EYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 99999999999964 3356899999999999999999999999 99999999999999999999999999886543321
Q ss_pred ------cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 209 ------YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 209 ------~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..++..|++||.+.+..++.++|||||||++||+++ |..|+.......... .+......+.+...+..
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 237 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK-----AIEEGYRLPAPMDCPAA 237 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH-----HHhCCCcCCCCCCCCHH
Confidence 122457999999998889999999999999999886 888775432211100 01111112233455788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+.+++.+||+.+|.+||++.++++.|..+
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 238 LHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 99999999999999999999999998764
No 214
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.9e-40 Score=311.53 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=203.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.+.||.|+||.||+|.. .+++.+++|.+........+.+.+|+.++++++||||+++++++......+++|||++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 356778899999999999995 4678899999987665566789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
+++|.+++.. ....+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ...
T Consensus 84 ~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 84 GGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred CCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence 9999998864 2357999999999999999999999999 999999999999999999999999998765432 234
Q ss_pred ccccCCCCccccccC---CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTG---RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~---~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
.++..|+|||.+.+. .++.++|||||||++|+|+||+.|+................... .....+...+.++.+++
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li 240 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPP-PKLKDKEKWSPVFHDFI 240 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-ccccchhhhhHHHHHHH
Confidence 567889999999776 78999999999999999999998876432111100000000000 01112334567899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||..+|.+|||+.+++.+
T Consensus 241 ~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 241 KKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHcCCChhhCCCHHHHhcC
Confidence 99999999999999999865
No 215
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9.5e-41 Score=330.11 Aligned_cols=247 Identities=15% Similarity=0.210 Sum_probs=194.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecC------Ce
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 124 (488)
..|.+++.||+|+||.||++.. ..++.||||++..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 4568889999999999999984 4688999999975432 2245688999999999999999999988643 35
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||++ ++|.+.+. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 97 ~~lv~e~~~-~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 97 VYLVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred eEEEhhhhc-ccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 799999997 56766663 34889999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc------------------ccc
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------------------NFL 263 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------------------~~~ 263 (488)
.. ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+......... ...
T Consensus 171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (355)
T cd07874 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_pred CccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHH
Confidence 43 245679999999999988899999999999999999999998865321100000 000
Q ss_pred cc---------------ccccc---CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 ML---------------MDSCL---EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~---------------~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ..... ....+...+..+.+|+.+||..||++|||+.++++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00 00000 001112234678999999999999999999999997
No 216
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.7e-40 Score=324.76 Aligned_cols=249 Identities=18% Similarity=0.144 Sum_probs=196.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+++. .+++.||||++.... ......+.+|+.++..++|+||+++++++.+.+..|+|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 467889999999999999994 468889999986422 1223457889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++||+|.+++.. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 y~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 82 YYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred CCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 9999999999964 2356899999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 --SYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...||+.|+|||++.+ +.++.++|||||||++|||++|+.||............... ......+......+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~~~ 238 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH-EERFQFPSHITDVSE 238 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcC-CCcccCCCccccCCH
Confidence 2468999999999875 46788999999999999999999998654221111100000 000000111123467
Q ss_pred HHHHHHHHhccCCCCC--CCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRE--RPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~--Rps~~~il~~ 306 (488)
++.+++.+|+..++.+ |++++++++|
T Consensus 239 ~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 239 EAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 8999999999866544 4689999887
No 217
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3e-40 Score=311.38 Aligned_cols=246 Identities=19% Similarity=0.220 Sum_probs=204.3
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+++.||.|+||.||.+. ..+++.|++|.+.... ......+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 5678889999999999998 5568899999987543 233457899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
++++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++....... .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 9999999997544567899999999999999999999999 9999999999999999999999999987654432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+++.|+|||.+.+..++.++||||||+++|||++|..|+........... ..... ....+...+.++.+++.+
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK----IVQGN-YTPVVSVYSSELISLVHS 235 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHcCC-CCCCccccCHHHHHHHHH
Confidence 4678999999999888889999999999999999999988765322111111 11111 111223456789999999
Q ss_pred hccCCCCCCCCHHHHHHHh
Q 011349 289 CLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l 307 (488)
||..+|.+||++.++++++
T Consensus 236 ~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 236 LLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HcccCcccCCCHHHHhhCc
Confidence 9999999999999999864
No 218
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2e-40 Score=318.25 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=199.5
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+++.||+|+||.||+|... .+..||+|.++..... ....+.+|+.+++.++||||+++++++......++
T Consensus 7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (288)
T cd05061 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV 86 (288)
T ss_pred HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence 4577889999999999999743 2457999998754322 23468899999999999999999999998899999
Q ss_pred EEecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 128 VAEFMPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+||++++++.++|+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~ 165 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGM 165 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCc
Confidence 999999999999996421 234567889999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCC
Q 011349 200 MKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 200 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
++...... ...++..|+|||.+.++.++.++|||||||++|||++ |..|+.......... .+... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~----~~~~~-~~~ 240 (288)
T cd05061 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK----FVMDG-GYL 240 (288)
T ss_pred cccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----HHHcC-CCC
Confidence 87543321 2234667999999998889999999999999999999 566654432211111 01111 111
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
..+...++.+.+++.+||+.+|++|||+.++++.|+...
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 241 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 223345678999999999999999999999999887654
No 219
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.3e-40 Score=315.40 Aligned_cols=243 Identities=17% Similarity=0.272 Sum_probs=201.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.+++.||.|++|.||+|.. .+++.||+|.+.... ......+.+|+.+++.++|+||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 356778889999999999994 468899999987553 233457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
++++|.+++.. .++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++..... ..
T Consensus 82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 99999999853 37999999999999999999999999 999999999999999999999999998766533 24
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh-hHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND-DGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 287 (488)
..+++.|+|||.+.+..++.++|||||||++|+|+||..|+........ ...+........+.. .+..+.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-----LFLIPKNNPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-----HHHhhhcCCCCCcccccCHHHHHHHH
Confidence 4678889999999988899999999999999999999988754321111 001111111112222 5678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..+|++|||+++++.+
T Consensus 233 ~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 233 LCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHhhCChhhCcCHHHHhhC
Confidence 9999999999999999986
No 220
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7e-41 Score=327.66 Aligned_cols=236 Identities=20% Similarity=0.204 Sum_probs=188.8
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhc---CCCCCcccccceecCCeeeEEEecCCC
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLL---RSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
||+|+||+||+|.. .+++.||||++...... ....+..|..++... +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999994 56899999998643211 223455677777665 699999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYS 210 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~ 210 (488)
|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||+++.... .....
T Consensus 81 g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 99999886 4567999999999999999999999999 99999999999999999999999999875432 22456
Q ss_pred cccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC-hhhHHHHHHHHHH
Q 011349 211 TNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS-NDDGTELVRLASR 288 (488)
Q Consensus 211 ~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~ 288 (488)
||+.|+|||++.+. .++.++|||||||++|+|+||+.||........... +..... .++ ...+..+.+++.+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~----i~~~~~--~~~~~~~~~~~~~li~~ 231 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN----IAFGKV--RFPKNVLSDEGRQFVKG 231 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHH----HHcCCC--CCCCccCCHHHHHHHHH
Confidence 89999999998764 478999999999999999999999865432221110 000000 111 1246788999999
Q ss_pred hccCCCCCCC----CHHHHHHH
Q 011349 289 CLQYEPRERP----NAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rp----s~~~il~~ 306 (488)
||..||.+|| ++.++++|
T Consensus 232 ~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 232 LLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HcCCCHHHCCCCCCCHHHHhcC
Confidence 9999999998 57777775
No 221
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-41 Score=297.79 Aligned_cols=253 Identities=20% Similarity=0.206 Sum_probs=205.1
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC----C----hHHHHHHHHHHhhc-CCCCCccccc
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP----D----SRQFLEEARAVGLL-RSERLVNLIG 117 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----~----~~~~~~E~~~l~~l-~h~niv~~~~ 117 (488)
.+...|..|.-.+.+|.|..++|-++. ..+|..+|+|++...... . .+.-.+|+.+|+++ .||+|+.+.+
T Consensus 11 aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 11 AAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 344445555555667999999999988 567888999998643311 1 23456899999999 5999999999
Q ss_pred ceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 118 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
++..+...++|+|.|+.|.|.|+|. +...+++....+|++|+.+|+.|||.++ ||||||||+|||+|++.++||+||
T Consensus 91 ~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 91 VYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred eccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEecc
Confidence 9999999999999999999999997 5678999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCCC---ccccccCCCCcccccc------CCcccCCceEeehHHHHHHhhCCCCCCcchhhh----hhcccccc
Q 011349 198 GLMKNSRDGK---SYSTNLAFTPPEYLRT------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL----IRGKNFLM 264 (488)
Q Consensus 198 gla~~~~~~~---~~~~t~~y~aPE~~~~------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~----~~~~~~~~ 264 (488)
|++.....+. ..+|||+|+|||.+.. ..|+...|+|++||++|.|+.|.+||+-...-. +..++..
T Consensus 168 GFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyq- 246 (411)
T KOG0599|consen 168 GFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQ- 246 (411)
T ss_pred ceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccc-
Confidence 9999887765 5689999999999864 357889999999999999999998876432111 1111110
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
...+.=.+.+....+||.+||+.||.+|.|++++|+|---
T Consensus 247 -----F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 247 -----FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred -----cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 0111112446778999999999999999999999998543
No 222
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.4e-40 Score=313.60 Aligned_cols=245 Identities=22% Similarity=0.268 Sum_probs=195.3
Q ss_pred cCCCCCCceEEEEEeC-CCc--EEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLVD-EDR--WIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|... ++. .+++|.++.... ...+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 4799999999999954 444 478898875432 2345788999999999 7999999999999989999999999999
Q ss_pred ChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 136 TLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 136 sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
+|.+++.... ...+++.++..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999986421 134889999999999999999999999 9999999999999999999999999986
Q ss_pred cCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 202 NSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 202 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
..... .....+..|+|||++.+..++.++|||||||++|||++ |..||......... ..+........+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-----EKLPQGYRLEKPLN 235 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH-----HHHhCCCCCCCCCc
Confidence 43211 11223567999999988889999999999999999997 88877543221111 11111111223334
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
.+.++.+++.+||..+|.+|||+.+++..|..+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 5678999999999999999999999999998763
No 223
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.6e-40 Score=317.61 Aligned_cols=248 Identities=18% Similarity=0.236 Sum_probs=202.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...+.++++||.|+||.||+|.. .++..||+|.+........+.+.+|++++++++||||+++++.+..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 34568889999999999999995 46889999999765544556789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 84 CDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred cCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 999999998864 3456999999999999999999999999 999999999999999999999999988654332 2
Q ss_pred ccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc-cCCCCChhhHHH
Q 011349 208 SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC-LEGHFSNDDGTE 281 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 281 (488)
...+++.|++||.+. +..++.++|||||||++|+|++|+.|+........ ........ .....+...+.+
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 237 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV----LLKILKSEPPTLDQPSKWSSS 237 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH----HHHHhcCCCCCcCCcccCCHH
Confidence 345788999999975 34567899999999999999999988754321110 00011000 011123345678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+++.+||..+|.+||++.+++++
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 238 FNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHHHhccChhhCcCHHHHhcC
Confidence 9999999999999999999999887
No 224
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.2e-40 Score=311.28 Aligned_cols=245 Identities=17% Similarity=0.193 Sum_probs=201.2
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceec-CCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCE-GEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~ 131 (488)
|.+++.||.|++|.||++.. .+++.||||++..... ...+.+.+|++++++++|+|++++++.+.. ....++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 57888999999999999994 4578899999875432 234568899999999999999999988764 4467999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+++++|.+++.......+++.+++.++.+++.||.+||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 99999999997544567999999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...+++.|+|||++.+..++.++|||||||++++|++|+.|+........... .... .....+...++.+.+++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~li~ 235 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYR----IIEG-KLPPMPKDYSPELGELIA 235 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HHhc-CCCCCccccCHHHHHHHH
Confidence 34578899999999988899999999999999999999988764322211111 1111 111233456688999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||+.+|++||++.+++.+
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 236 TMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHhccCcccCCCHHHHhcC
Confidence 9999999999999999876
No 225
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.3e-40 Score=311.54 Aligned_cols=237 Identities=23% Similarity=0.360 Sum_probs=190.7
Q ss_pred cCCCCCCceEEEEEeCC-C----------cEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 61 EHGEKAPNVVYKGLVDE-D----------RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.||+|+||.||+|.... + ..|++|.+...... ...+.+|+.+++.++||||+++++++.. ...++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 57999999999999644 3 25888887655432 6789999999999999999999999987 7789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-------CCeeccCCCccc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-------NPRLSCFGLMKN 202 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-------~~kl~Dfgla~~ 202 (488)
||+++|+|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++..
T Consensus 80 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 80 EYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 999999999998742 236899999999999999999999999 99999999999999887 799999999987
Q ss_pred CCCCCccccccCCCCccccccC--CcccCCceEeehHHHHHHhhC-CCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 203 SRDGKSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 203 ~~~~~~~~~t~~y~aPE~~~~~--~~~~~sDv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
........++..|+|||++.+. .++.++|||||||++|||++| ..|+........ ...... ....+....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-----~~~~~~--~~~~~~~~~ 230 (259)
T cd05037 158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-----ERFYQD--QHRLPMPDC 230 (259)
T ss_pred cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-----HHHHhc--CCCCCCCCc
Confidence 6665556677889999999876 789999999999999999996 444332211100 000000 011111123
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
..+.+++.+||..+|.+|||+.++++.|+
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 78999999999999999999999998764
No 226
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3e-40 Score=315.70 Aligned_cols=252 Identities=18% Similarity=0.241 Sum_probs=202.7
Q ss_pred ccccccCCCCCCceEEEEEeCC-----CcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceec-CCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDE-----DRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCE-GEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv 128 (488)
+.+.+.||+|+||.||+|.... +..|++|++..... .....+.+|+.++++++|+||+++++++.. +...+++
T Consensus 8 ~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 87 (280)
T cd05043 8 VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVL 87 (280)
T ss_pred eEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEE
Confidence 4566788999999999999655 67899999875432 224568899999999999999999998766 4678999
Q ss_pred EecCCCCChhhhhccCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 129 AEFMPNETLSKHLFHWEN------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
+||+++++|.+++..... ..+++.+++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++.
T Consensus 88 ~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~~ 166 (280)
T cd05043 88 YPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSRD 166 (280)
T ss_pred EEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCccc
Confidence 999999999999864321 46899999999999999999999999 99999999999999999999999999986
Q ss_pred CCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 203 SRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 203 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
..... ...++..|+|||++.+..++.++|||||||++||+++ |+.|+......... ..+........+
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~ 241 (280)
T cd05043 167 LFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMA-----AYLKDGYRLAQP 241 (280)
T ss_pred ccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHH-----HHHHcCCCCCCC
Confidence 54322 2334678999999988889999999999999999999 88777543221111 111111111223
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
..+++++.+++.+||..+|++|||+.+++..|+.+...
T Consensus 242 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 242 INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 34567899999999999999999999999999887653
No 227
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.4e-40 Score=317.05 Aligned_cols=255 Identities=20% Similarity=0.263 Sum_probs=205.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+++++++.||+|+||+||++.. .+++.||+|++..... ...+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4567888999999999999994 5688999999875432 2346789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 208 (488)
+++++|.+++. ..+.+++..+..++.+++.||.|||+. + ++||||||+||++++++.++|+|||++...... ..
T Consensus 85 ~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 85 MDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred CCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 99999999886 345799999999999999999999974 6 999999999999999999999999998754322 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh---hc----cccccccccccCCCCC-hhhHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI---RG----KNFLMLMDSCLEGHFS-NDDGT 280 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~---~~----~~~~~~~~~~~~~~~~-~~~~~ 280 (488)
..++..|+|||++.+..++.++|||||||++|+|+||+.||........ .. .......... ....+ ...+.
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 240 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPE 240 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCH
Confidence 5678999999999888899999999999999999999998764322100 00 0011111111 11111 22567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+.+++.+||..||++|||+.+++++..-++.
T Consensus 241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 241 DLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 89999999999999999999999998654443
No 228
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.6e-40 Score=325.16 Aligned_cols=247 Identities=15% Similarity=0.201 Sum_probs=194.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC------Ce
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 124 (488)
..|.+++.||+|+||.||+|.. ..++.||||++.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 3567888999999999999994 468889999997543 22345788999999999999999999987543 35
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.|+||||++ ++|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 104 VYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred EEEEEeCCC-CCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 799999997 57777764 34889999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-------------------
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF------------------- 262 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~------------------- 262 (488)
.. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||............+
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (364)
T cd07875 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 257 (364)
T ss_pred CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHH
Confidence 43 24567899999999999999999999999999999999999886532111000000
Q ss_pred --------------cccccccc---CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 --------------LMLMDSCL---EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 --------------~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........ ........+..+.+|+.+||..||.+|||+.++++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 001111124578999999999999999999999997
No 229
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-41 Score=321.61 Aligned_cols=246 Identities=19% Similarity=0.236 Sum_probs=200.6
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 130 (488)
..|.++++||+||.+.||++...+.+.+|+|++..... .....|.+|+..|.+|+ |.+||++++|-..++.+|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 46889999999999999999987778899998765432 23567999999999995 9999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|-+ -+|..+|.........| .+..++.|++.++.++|.+| |||.||||.|+|+- .|.+||+|||+|..+....
T Consensus 441 ~Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred ccc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence 986 89999997644333334 78889999999999999999 99999999999997 6799999999999876543
Q ss_pred ---ccccccCCCCccccccC-----------CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC
Q 011349 208 ---SYSTNLAFTPPEYLRTG-----------RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~-----------~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+.+||+.||+||.+... +.+++|||||||||||+|+.|++||.... . ....+..+.++...-+
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-n--~~aKl~aI~~P~~~Ie 593 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-N--QIAKLHAITDPNHEIE 593 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-H--HHHHHHhhcCCCcccc
Confidence 56899999999998542 36789999999999999999998764321 1 1223344444433334
Q ss_pred CChhh-HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 274 FSNDD-GTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 274 ~~~~~-~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
++... ..++++++..||..||.+|||+.++|+|
T Consensus 594 fp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 594 FPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 44322 2349999999999999999999999987
No 230
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.4e-40 Score=314.79 Aligned_cols=243 Identities=16% Similarity=0.272 Sum_probs=203.2
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+..++.||.|+||.||+|.. .++..||||++..... .....+.+|+.++++++||||+++++++..+...++||||++
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCC
Confidence 45678899999999999995 4688999999875432 234578999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 209 (488)
|++|.+++. ..++++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 86 ~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06640 86 GGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccc
Confidence 999999985 356899999999999999999999999 9999999999999999999999999987654322 33
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.++..|+|||.+.+..++.++|||||||++|||+||..|+........ ............+...+..+.+++.+|
T Consensus 162 ~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06640 162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----LFLIPKNNPPTLTGEFSKPFKEFIDAC 236 (277)
T ss_pred cCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----hhhhhcCCCCCCchhhhHHHHHHHHHH
Confidence 567889999999988899999999999999999999988754321111 111111222334456778899999999
Q ss_pred ccCCCCCCCCHHHHHHHh
Q 011349 290 LQYEPRERPNAKSLVASL 307 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l 307 (488)
|..+|++||++.+++.+-
T Consensus 237 l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06640 237 LNKDPSFRPTAKELLKHK 254 (277)
T ss_pred cccCcccCcCHHHHHhCh
Confidence 999999999999999883
No 231
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3e-40 Score=325.07 Aligned_cols=249 Identities=19% Similarity=0.239 Sum_probs=195.4
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecC------C
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEG------E 123 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 123 (488)
...|.+++.||.|+||.||+|. ..+++.||||++..... ...+.+.+|+.++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 3456788999999999999999 45788999999875431 2235678999999999999999999988543 3
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
..+++++++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred cEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceec
Confidence 478999998 789988874 456999999999999999999999999 999999999999999999999999999875
Q ss_pred CCC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------cccccc----------
Q 011349 204 RDG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------GKNFLM---------- 264 (488)
Q Consensus 204 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~---------- 264 (488)
... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ......
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07878 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHA 248 (343)
T ss_pred CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhH
Confidence 543 34578999999999876 56889999999999999999999888653211000 000000
Q ss_pred --cccc---ccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 --LMDS---CLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 --~~~~---~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... .... ......++.+.+|+.+||..||.+|||+.+++.|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 249 RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000 0001234567899999999999999999999987
No 232
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.1e-40 Score=315.93 Aligned_cols=256 Identities=14% Similarity=0.195 Sum_probs=201.9
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccce
Q 011349 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCC 119 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 119 (488)
++.++....+. +.+.+.||.|+||.||+|.. .+++.||+|++.... .....+..|+.++.++ +|+||+++++++
T Consensus 7 ~~~~~~~~~~~---~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 7 DLSALRDPAGI---FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhcChhhh---hhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 44444444444 46777889999999999994 568899999986543 2345788999999999 699999999998
Q ss_pred ec------CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 120 CE------GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 120 ~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
.. ....++||||+++|+|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEE
Confidence 53 457899999999999999997655566899999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCC----CCccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccc
Q 011349 194 LSCFGLMKNSRD----GKSYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 194 l~Dfgla~~~~~----~~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 264 (488)
|+|||++..... .....+++.|+|||.+. +..++.++|||||||++|||++|..||....... ....
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~----~~~~ 237 (282)
T cd06636 162 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR----ALFL 237 (282)
T ss_pred EeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh----hhhh
Confidence 999999875432 23456788999999986 3467889999999999999999998875432110 0111
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..............+..+.+++.+||..||.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 111111111223456789999999999999999999999875
No 233
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.4e-40 Score=312.68 Aligned_cols=244 Identities=19% Similarity=0.270 Sum_probs=200.3
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+.+.||.|+||.||+|...+++.+|||.+...... ....+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 4567788999999999999878999999998754321 1245889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||++|++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 82 EFVPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred ecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 9999999999996 3456899999999999999999999999 99999999999999999999999999875421
Q ss_pred ------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc-ccCCCCChhh
Q 011349 206 ------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS-CLEGHFSNDD 278 (488)
Q Consensus 206 ------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 278 (488)
.....++..|+|||++.+..++.++|||||||++|+|++|..||........ ....... ......+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 234 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA----MFYIGAHRGLMPRLPDSF 234 (265)
T ss_pred ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH----HHHhhhccCCCCCCCCCC
Confidence 1134578899999999988899999999999999999999988754211100 0000000 1112234456
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.++.+++.+||..+|++||++.+++.+
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 7889999999999999999999999875
No 234
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.5e-40 Score=322.82 Aligned_cols=249 Identities=18% Similarity=0.146 Sum_probs=196.1
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||++... +++.||+|++.... ......+..|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 4578889999999999999954 57889999986421 1123458889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|+++|+|.+++.+ ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999964 2456899999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 -KSYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....||+.|+|||++. ...++.++|||||||++|||++|+.||............... ......+.....+++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~s~ 238 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH-KERFQFPAQVTDVSE 238 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CccccCCCccccCCH
Confidence 1346899999999986 246788999999999999999999998654221111110000 000001111234578
Q ss_pred HHHHHHHHhccCCCCC--CCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRE--RPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~--Rps~~~il~~ 306 (488)
++.+++.+|+..++.+ |+++.++++|
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 239 DAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 8999999998655444 6899999988
No 235
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-40 Score=334.13 Aligned_cols=242 Identities=19% Similarity=0.179 Sum_probs=191.3
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+.+.+.||+|+||.||+|... .++.||||... ...+.+|+++|++++|+|||++++++..++..++|||++.
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~- 243 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR- 243 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence 577888999999999999954 58889999643 2346789999999999999999999999999999999995
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC------Cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KS 208 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~ 208 (488)
++|.+++.. ....+++.+++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 244 ~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 321 (461)
T PHA03211 244 SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG 321 (461)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence 788888754 3346999999999999999999999999 999999999999999999999999998765322 13
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchh------------hhhhccccc-ccccc-------
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL------------DLIRGKNFL-MLMDS------- 268 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~------------~~~~~~~~~-~~~~~------- 268 (488)
..||+.|+|||++.+..++.++|||||||++|||++|..++..... ..+...... ..+..
T Consensus 322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~ 401 (461)
T PHA03211 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV 401 (461)
T ss_pred cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence 4689999999999999999999999999999999998765432110 001000000 00000
Q ss_pred ---------ccCCC-----CC--hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 ---------CLEGH-----FS--NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ---------~~~~~-----~~--~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..... +. ...+..+.+|+.+||+.||.+|||+.|+|+|
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000 00 0123578899999999999999999999987
No 236
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.2e-40 Score=316.79 Aligned_cols=249 Identities=22% Similarity=0.305 Sum_probs=199.5
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
++.+++.||+|+||.||+|... ++..||+|++...... ....+.+|+.++++++||||+++++++..+...++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (288)
T cd05050 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCL 85 (288)
T ss_pred hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEE
Confidence 3467888999999999999853 4678999998754322 24568899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec
Q 011349 128 VAEFMPNETLSKHLFHWE--------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~ 187 (488)
||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+||+++
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~ 164 (288)
T cd05050 86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVG 164 (288)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEec
Confidence 999999999999986321 134788999999999999999999999 99999999999999
Q ss_pred CCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcc
Q 011349 188 QDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGK 260 (488)
Q Consensus 188 ~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~ 260 (488)
+++.++|+|||++....... ....+..|+|||.+.+..++.++|||||||++|||++ |..|+.........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~-- 242 (288)
T cd05050 165 ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVI-- 242 (288)
T ss_pred CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH--
Confidence 99999999999987543221 2233567999999988889999999999999999998 76666443221111
Q ss_pred ccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 261 NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
.. +........+...+.++.+++.+||+.+|.+|||+.++++.|++
T Consensus 243 --~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 243 --YY-VRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --HH-HhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 00 11111112233456889999999999999999999999998863
No 237
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-40 Score=315.41 Aligned_cols=249 Identities=18% Similarity=0.253 Sum_probs=201.0
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
++++++.||+|+||.||++... ++..||+|.+.... ......+.+|+.++++++||||+++++.+...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 4678899999999999999954 78999999987542 122457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cc
Q 011349 133 PNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 208 (488)
+|++|..++.... ...+++..+..++.|++.||.|||+. + ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT 160 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence 9999998886321 23799999999999999999999974 6 999999999999999999999999998765332 23
Q ss_pred cccccCCCCccccccCC------cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 209 YSTNLAFTPPEYLRTGR------VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~------~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
..+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||......... ........ ......+...+.++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 238 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-AQLSAIVD-GDPPTLPSGYSDDA 238 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH-HHHHHHhh-cCCCCCCcccCHHH
Confidence 45778999999986543 478999999999999999999987543221110 01111111 11223444567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+||..+|++||++.+++.+
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 239 QDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHHHHHHcccCcccCCCHHHHhcC
Confidence 999999999999999999999986
No 238
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=7.3e-40 Score=315.61 Aligned_cols=252 Identities=19% Similarity=0.267 Sum_probs=196.7
Q ss_pred ccccccCCCCCCceEEEEEeC-----------------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCccccc
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-----------------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIG 117 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~ 117 (488)
+.+.+.||+|+||.||++... ++..||+|+++..... ....+.+|+.+++.++|+||+++++
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~ 86 (296)
T cd05095 7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLA 86 (296)
T ss_pred ceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 467888999999999998532 2346899999765322 2457899999999999999999999
Q ss_pred ceecCCeeeEEEecCCCCChhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 118 CCCEGEERLLVAEFMPNETLSKHLFHWE---------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 118 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
++...+..++||||+++++|.+++.... ...+++.++..++.||+.||.|||+.+ ++||||||+|||++.
T Consensus 87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~~ 165 (296)
T cd05095 87 VCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGK 165 (296)
T ss_pred EEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEcC
Confidence 9999999999999999999999986421 124778899999999999999999999 999999999999999
Q ss_pred CCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh--CCCCCCcchhhhhhc-
Q 011349 189 DGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--GKHIPPSHALDLIRG- 259 (488)
Q Consensus 189 ~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t--g~~p~~~~~~~~~~~- 259 (488)
++.++|+|||+++...... ...+++.|++||...++.++.++|||||||++|||+| |..|+..........
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 245 (296)
T cd05095 166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIEN 245 (296)
T ss_pred CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHH
Confidence 9999999999988654322 2233578999999888889999999999999999998 555553321111100
Q ss_pred -cccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 260 -KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 260 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
...............+..++..+.+++.+||+.||.+||++.+|++.|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 246 TGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0000000000111223345688999999999999999999999999886
No 239
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6e-40 Score=314.59 Aligned_cols=259 Identities=15% Similarity=0.173 Sum_probs=202.1
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccc
Q 011349 41 FNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGC 118 (488)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~ 118 (488)
+.++.+..++++| .+++.||+|+||.||+|.. .+++.+|+|++.... .....+.+|+.+++.+ +||||++++++
T Consensus 8 ~~~~~~~~~~~~~---~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 83 (286)
T cd06638 8 IIFDSFPDPSDTW---EIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGM 83 (286)
T ss_pred EEeecCCCcccce---eeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeee
Confidence 4455555666666 6788899999999999984 568899999986533 2245788999999999 69999999998
Q ss_pred ee-----cCCeeeEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 119 CC-----EGEERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 119 ~~-----~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
+. .++..++||||++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGG 162 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCC
Confidence 74 345689999999999999887531 3456899999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCC----CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc
Q 011349 192 PRLSCFGLMKNSRDG----KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 262 (488)
++|+|||++...... ....+++.|+|||.+.. ..++.++|||||||++|||++|+.|+......... ...
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~-~~~ 241 (286)
T cd06638 163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL-FKI 241 (286)
T ss_pred EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH-hhc
Confidence 999999998765432 23467899999999853 44788999999999999999999887543211100 000
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.... ......+...+..+.+++.+||+.+|++|||+.++++++
T Consensus 242 ~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 242 PRNP--PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred cccC--CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0000 001111223456799999999999999999999999874
No 240
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=7.9e-40 Score=318.55 Aligned_cols=244 Identities=16% Similarity=0.217 Sum_probs=185.4
Q ss_pred cccCCCCCCceEEEEEeC---CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeEEEecCC
Q 011349 59 VSEHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLLVAEFMP 133 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~ 133 (488)
.++||+|+||.||+|... +++.||+|.+.... ....+.+|+.++++++||||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 357899999999999853 46789999987543 23567899999999999999999998854 456899999996
Q ss_pred CCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee----cCCCCCeeccCCCccc
Q 011349 134 NETLSKHLFHW-------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKN 202 (488)
Q Consensus 134 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~ 202 (488)
++|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 6888776421 1235899999999999999999999999 9999999999999 4567899999999976
Q ss_pred CCCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc---------------
Q 011349 203 SRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG--------------- 259 (488)
Q Consensus 203 ~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~--------------- 259 (488)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||++|++||.....+....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 5432 23467899999999977 458899999999999999999998875321110000
Q ss_pred -----ccc---c------cccccccCCC------------CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 -----KNF---L------MLMDSCLEGH------------FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 -----~~~---~------~~~~~~~~~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+ . .......... .....+..+.+|+.+||+.||.+|||++++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 0 0000000000 000123467899999999999999999999976
No 241
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=5.9e-40 Score=311.91 Aligned_cols=250 Identities=23% Similarity=0.294 Sum_probs=201.4
Q ss_pred ccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+.+.+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.+ ...++|||
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e 86 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVME 86 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEE
Confidence 4667888999999999998533 2468999987554 2234579999999999999999999998865 56789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 87 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 164 (270)
T cd05056 87 LAPLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164 (270)
T ss_pred cCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeeccccccee
Confidence 9999999999964 2346899999999999999999999999 9999999999999999999999999987654332
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...++..|+|||.+.+..++.++||||||+++||+++ |..||.......... .+........+..++..+.+
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 239 (270)
T cd05056 165 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG-----RIENGERLPMPPNCPPTLYS 239 (270)
T ss_pred cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-----HHHcCCcCCCCCCCCHHHHH
Confidence 1223467999999988889999999999999999986 888875542211110 01111111234456788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 285 LASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
++.+||..+|.+|||+.+++..|..+...
T Consensus 240 li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 240 LMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999987654
No 242
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.8e-40 Score=308.81 Aligned_cols=245 Identities=17% Similarity=0.212 Sum_probs=202.0
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.+.||+|+||.||+|... ++..|++|.+..... .+.+.+|++++++++|+||+++++++..+...++++||++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 3567788899999999999965 488999999875532 6789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 209 (488)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... ..
T Consensus 82 ~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (256)
T cd06612 82 AGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV 159 (256)
T ss_pred CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence 9999999854 3467899999999999999999999999 9999999999999999999999999988655432 23
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.++..|+|||++.+..++.++||||||+++|+|++|+.|+........... .... .......+...+..+.+++.+|
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM-IPNK--PPPTLSDPEKWSPEFNDFVKKC 236 (256)
T ss_pred cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-hccC--CCCCCCchhhcCHHHHHHHHHH
Confidence 468899999999988899999999999999999999988754321110000 0000 0001112334557899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|+.+|.+|||+.+++.+
T Consensus 237 l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 237 LVKDPEERPSAIQLLQH 253 (256)
T ss_pred HhcChhhCcCHHHHhcC
Confidence 99999999999999875
No 243
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-39 Score=321.73 Aligned_cols=243 Identities=12% Similarity=0.156 Sum_probs=190.9
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.+++.||+|+||.||+|... ++..||+|+.... ....|+.++++++||||+++++++......++|||++.
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 4688899999999999999954 5778999985432 23579999999999999999999999999999999995
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Cccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 210 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 210 (488)
++|.+++.. ....+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 141 -~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 141 -SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred -CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 688888854 3457999999999999999999999999 999999999999999999999999998754322 2456
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhh----h--hcccccccc------cc----------
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL----I--RGKNFLMLM------DS---------- 268 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~----~--~~~~~~~~~------~~---------- 268 (488)
||+.|+|||++.+..++.++|||||||++|||+++..++....... . ....+...+ ..
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRL 297 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHH
Confidence 8999999999999899999999999999999999766543211000 0 000000000 00
Q ss_pred ---------ccCCCC-------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 ---------CLEGHF-------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ---------~~~~~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+..+ ....+..+.+||.+||+.||.+|||+.++++|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 000000 01234566789999999999999999999987
No 244
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.5e-40 Score=312.06 Aligned_cols=251 Identities=18% Similarity=0.263 Sum_probs=203.2
Q ss_pred cccccccCCCCCCceEEEEEeC-CCc----EEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDR----WIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++++++.||+|+||.||+|... +|. .||+|.+...... ....+.+|+.++.+++||||+++++++.. ...++|
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v 86 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLI 86 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEE
Confidence 3467788999999999999843 343 5899998765432 24578899999999999999999999876 789999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS 208 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 208 (488)
|||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 87 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 87 TQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred EecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 999999999999864 3345999999999999999999999998 99999999999999999999999999986543321
Q ss_pred ------cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 209 ------YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 209 ------~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..++..|+|||.+....++.++|||||||++||+++ |+.|+......... ..+........+..++..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIP-----DLLEKGERLPQPPICTID 239 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHH-----HHHhCCCCCCCCCCCCHH
Confidence 122467999999988889999999999999999999 88887654222111 111111112223345678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+++.+||..+|..||++.++++.|..+.+.
T Consensus 240 ~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 240 VYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999987654
No 245
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=308.36 Aligned_cols=243 Identities=19% Similarity=0.285 Sum_probs=207.2
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+-+.||+|.|.+|-+|+ .-+|..||||++.+....+ ...+.+|++.|+-++|||||++|.+......+|||.|+-
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG 99 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG 99 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence 3445667999999999998 4589999999998766544 347899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCcccCCCC---Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG---KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~---~~ 208 (488)
++|+|.++|.+.. ..+++....+++.||+.|+.|+|+.. +|||||||+||.+- .-|-|||.|||++-...++ .+
T Consensus 100 D~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 100 DGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred CCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence 9999999998644 44999999999999999999999998 99999999999874 5689999999998776655 47
Q ss_pred cccccCCCCccccccCCcc-cCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~-~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
.+|+..|.|||.+.|..|+ ++.||||||||||.|++|++||...... +.+..+++= .-..|...+.+..+||.
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS----ETLTmImDC--KYtvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS----ETLTMIMDC--KYTVPSHVSKECRDLIQ 251 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch----hhhhhhhcc--cccCchhhhHHHHHHHH
Confidence 7999999999999998885 5899999999999999999998754222 122222221 12456778899999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
.||..||.+|.+.++|..+
T Consensus 252 sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 252 SMLVRDPKKRASLEEIVST 270 (864)
T ss_pred HHHhcCchhhccHHHHhcc
Confidence 9999999999999999876
No 246
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.3e-40 Score=319.61 Aligned_cols=247 Identities=19% Similarity=0.193 Sum_probs=202.4
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+++.+.||+|+||.||+|... +++.||||.+...... ..+.+..|+++++.++|+||+++++++..+...++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 3567788999999999999954 5899999999765433 34568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|+.|++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999999987544567999999999999999999999999 999999999999999999999999987654221
Q ss_pred -----------------------------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh
Q 011349 207 -----------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI 257 (488)
Q Consensus 207 -----------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~ 257 (488)
....||..|+|||++.+..++.++||||||+++|+|++|..|+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 123567889999999988899999999999999999999998865432211
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC----HHHHHHH
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN----AKSLVAS 306 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~il~~ 306 (488)
+................+..+.+++.+||..+|++||| +.+++.+
T Consensus 241 ----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 241 ----FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred ----HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 11111111111111125788999999999999999999 8888875
No 247
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.3e-40 Score=312.14 Aligned_cols=249 Identities=20% Similarity=0.290 Sum_probs=199.4
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.++..||.|+||.||+|... ....|++|.+...... ..+.+.+|++++++++|+||+++++++......++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM 85 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceE
Confidence 3467888999999999999853 2457999998754433 24679999999999999999999999988889999
Q ss_pred EEecCCCCChhhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 128 VAEFMPNETLSKHLFHWEN-------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
||||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccc
Confidence 9999999999999974331 26899999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCC-----CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCC
Q 011349 201 KNSRDG-----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 201 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
...... ....++..|+|||.+.+...+.++||||||+++|+|++ |..|+.......... ...........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~ 240 (275)
T cd05046 165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLN----RLQAGKLELPV 240 (275)
T ss_pred cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHH----HHHcCCcCCCC
Confidence 754321 22345677999999988888999999999999999999 555654321111100 11101111122
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+...+..+.+++.+||..+|.+|||+.+++..|.
T Consensus 241 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 3345688999999999999999999999999875
No 248
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5.1e-40 Score=314.89 Aligned_cols=249 Identities=20% Similarity=0.230 Sum_probs=196.1
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+++.||+|++|.||+|.. .++..||||+++.... .....+.+|+.++++++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 56778899999999999995 4689999999875432 22457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 133 PNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+ ++|.+++.... +..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence 7 68888875432 357999999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc--------------------cccccc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------------------NFLMLM 266 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------------------~~~~~~ 266 (488)
...+++.|+|||.+.+ ..++.++|||||||++|+|+||++|+........... ......
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF 239 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence 2355789999998875 4478899999999999999999988764321100000 000000
Q ss_pred ccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.... .......++++.+++.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000 00112346788999999999999999999999875
No 249
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=8.4e-40 Score=311.21 Aligned_cols=248 Identities=20% Similarity=0.223 Sum_probs=197.4
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC----------ChHHHHHHHHHHhhcCCCCCcccccceecCCe
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP----------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 124 (488)
+.+.+.||.|+||.||+|. ..+|+.||||.++..... ..+.+.+|+.+++.++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 4566788999999999998 456889999988643211 02357889999999999999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.++|+|||+++...
T Consensus 83 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred eEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 9999999999999999863 367999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC------CccccccCCCCccccccCC--cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 205 DG------KSYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 205 ~~------~~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
.. ....++..|+|||.+.... ++.++||||||+++|++++|..|+...........................
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM 239 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccc
Confidence 32 2345788999999987654 789999999999999999999887533211100000000011111112223
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+..+.+++.+||..+|.+|||+.+++.|
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 240 NLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 456889999999999999999999999986
No 250
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.5e-40 Score=327.89 Aligned_cols=244 Identities=18% Similarity=0.211 Sum_probs=196.1
Q ss_pred cccccccCCCCCCceEEEEEeC---CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||++... .+..||||.+... ..+.+|+++|++++||||+++++++......++|||+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 4688999999999999999743 3577999988643 3456899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+. ++|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||+++......
T Consensus 168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 96 78888884 4567999999999999999999999999 9999999999999999999999999987654321
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhh--------hhc---cc--cc--------c
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL--------IRG---KN--FL--------M 264 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~--------~~~---~~--~~--------~ 264 (488)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ... .. +. .
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 3468999999999998899999999999999999999999886532110 000 00 00 0
Q ss_pred ---ccccccCCCCC-------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 265 ---LMDSCLEGHFS-------NDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 265 ---~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
......+..+. ...+.++.++|.+||..||++|||+.+++.+-
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p 376 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00000011110 12346788999999999999999999999983
No 251
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.3e-39 Score=309.22 Aligned_cols=246 Identities=17% Similarity=0.197 Sum_probs=186.6
Q ss_pred cCCCCCCceEEEEEeCCC---cEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGLVDED---RWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
+||+|+||.||+|...++ ..+++|.+..... ...+.+.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 579999999999984433 3466777665432 235679999999999999999999999999899999999999999
Q ss_pred hhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC------CCc
Q 011349 137 LSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------GKS 208 (488)
Q Consensus 137 L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~~~ 208 (488)
|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++..... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999986421 234677788899999999999999999 99999999999999999999999999864321 223
Q ss_pred cccccCCCCcccccc-------CCcccCCceEeehHHHHHHhhCCC-CCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 209 YSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLSGKH-IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~il~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
..++..|+|||++.+ ..++.++|||||||++|||+++.. |+......................+..+...++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE 240 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence 456789999998753 245789999999999999998654 443221111111101111111112223334567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+.+++..|| .+|++||++++|++.|.
T Consensus 241 ~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 241 RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 8899999999 67999999999998774
No 252
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.1e-39 Score=309.30 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=201.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+.+.+.||.|+||.||+|.. .++..||+|++..... .....+.+|+++++.++|+||+++++.+..++..++|||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 357788899999999999994 4688899999975442 24567999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 133 PNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999964322 56899999999999999999999999 9999999999999999999999999987654432
Q ss_pred ----ccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC-CChhhHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH-FSNDDGTE 281 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 281 (488)
...++..|+|||.+... .++.++|||||||++|+|++|+.|+............... ........ .....+..
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSKS 239 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccHH
Confidence 23578899999998876 7899999999999999999999887543211110010110 01111111 11245678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+++.+||..||++||++.+++.|
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 240 FRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhC
Confidence 9999999999999999999999976
No 253
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=8e-40 Score=308.44 Aligned_cols=245 Identities=16% Similarity=0.192 Sum_probs=203.2
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+++.||+|+||.||++. ..+++.||+|.+..... .....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 5678889999999999999 45688999999875432 23457899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
++++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence 9999999886544456899999999999999999999999 9999999999999999999999999987654432 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+++.|+|||++.+..++.++|||||||++++|+||+.|+.......... ..... .....+...+.++.+++.+
T Consensus 161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08218 161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVL----KIIRG-SYPPVSSHYSYDLRNLVSQ 235 (256)
T ss_pred ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHH----HHhcC-CCCCCcccCCHHHHHHHHH
Confidence 356888999999998889999999999999999999998875432211111 11111 1112344557789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||+.+|.+||++.+++++
T Consensus 236 ~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 236 LFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HhhCChhhCcCHHHHhhC
Confidence 999999999999999986
No 254
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-39 Score=344.41 Aligned_cols=249 Identities=18% Similarity=0.214 Sum_probs=196.0
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 127 (488)
+..|.+++.||+|+||.||+|.. .++..||+|++...... ....|..|+.++++++|||||+++++|.. ...+||
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 34678999999999999999994 45788999998754322 24578999999999999999999998854 356899
Q ss_pred EEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC------CcccccccCCceeecC-----------
Q 011349 128 VAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKG------RALYHDLNTYRILFDQ----------- 188 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~iiH~Dlkp~Nill~~----------- 188 (488)
||||+++|+|.++|... ....+++..++.|+.||+.||.|||+.+ +||||||||+||||+.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 99999999999998642 2357999999999999999999999842 2999999999999964
Q ss_pred ------CCCCeeccCCCcccCCCC---CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh
Q 011349 189 ------DGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI 257 (488)
Q Consensus 189 ------~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~ 257 (488)
.+.+||+|||++...... ....||+.|+|||++.+ ..++.++|||||||+||||+||..||........
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~q 251 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQ 251 (1021)
T ss_pred ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHH
Confidence 235899999999865432 23468999999999864 4588999999999999999999998854311100
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+...+..... ......+.++.+||.+||..+|.+||++.+++.+
T Consensus 252 ----li~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 252 ----LISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred ----HHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 0011111000 0112346789999999999999999999999965
No 255
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8.1e-40 Score=316.05 Aligned_cols=252 Identities=18% Similarity=0.263 Sum_probs=199.8
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+..|.++++||.|+||.||+|.. .+++.||+|.++..... ....+.+|+.+++.++||||+++++++..++..++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 345678899999999999999995 46889999998754322 2456789999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLD-KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred eccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 9997 689888864 3456899999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-----------cccccccccc-----
Q 011349 207 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----------GKNFLMLMDS----- 268 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-----------~~~~~~~~~~----- 268 (488)
....+++.|+|||.+.+ ..++.++|||||||++|||+||++||......... ...+......
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 23356889999999875 45788999999999999999999888654221100 0000000000
Q ss_pred ----ccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 ----CLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ----~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... .......++.+.+|+.+||..||.+|||+.+++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000 01112346788999999999999999999999986
No 256
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.1e-40 Score=316.30 Aligned_cols=249 Identities=19% Similarity=0.309 Sum_probs=198.4
Q ss_pred cccccCCCCCCceEEEEEe-CCCc----EEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDR----WIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+++.||+|+||.||+|.+ .+|. .||+|.+....... ...+.+|+.+++.++||||+++++++.. ...++|+|
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~v~e 88 (303)
T cd05110 10 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQ 88 (303)
T ss_pred eeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-CCceeeeh
Confidence 5667889999999999984 3454 47999887554222 3368899999999999999999998865 45679999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 89 ~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 166 (303)
T cd05110 89 LMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 166 (303)
T ss_pred hcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCccccc
Confidence 9999999999864 3346899999999999999999999999 9999999999999999999999999998654321
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...++..|+|||.+.+..++.++|||||||++|||++ |+.|+........ ...+........+..++..+.
T Consensus 167 ~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd05110 167 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-----PDLLEKGERLPQPPICTIDVY 241 (303)
T ss_pred ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHCCCCCCCCCCCCHHHH
Confidence 2234678999999998889999999999999999997 7777754322111 111111111122334567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+++.+||..+|++||++.+++..|+.+...
T Consensus 242 ~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 242 MVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999987654
No 257
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=6.5e-40 Score=311.43 Aligned_cols=242 Identities=22% Similarity=0.337 Sum_probs=195.8
Q ss_pred cCCCCCCceEEEEEeCC-------CcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 61 EHGEKAPNVVYKGLVDE-------DRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.||+|+||.||+|...+ +..||||.+..... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 47999999999998532 25799999865432 23567899999999999999999999999889999999999
Q ss_pred CCCChhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-----CCeeccCCCccc
Q 011349 133 PNETLSKHLFHW-----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-----NPRLSCFGLMKN 202 (488)
Q Consensus 133 ~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-----~~kl~Dfgla~~ 202 (488)
++++|.+++... ....+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++ .++|+|||+++.
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 999999998642 2234889999999999999999999999 99999999999999877 899999999876
Q ss_pred CCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 203 SRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 203 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
..... ...++..|+|||.+.++.++.++|||||||++|||+| |..|+........ ...+........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~-----~~~~~~~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV-----LQHVTAGGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH-----HHHHhcCCccCCc
Confidence 53321 2234678999999998899999999999999999998 8877754321111 1111111112233
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 456788999999999999999999999999875
No 258
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=8.6e-40 Score=313.43 Aligned_cols=249 Identities=22% Similarity=0.269 Sum_probs=197.7
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|++++.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++|+||+++++++......++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 3577888999999999999954 689999999865432 2235688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+++++|..++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 99988887765 3446999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc---cccccc-------c----------
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG---KNFLML-------M---------- 266 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~---~~~~~~-------~---------- 266 (488)
...++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+........ ...... .
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456789999999876 457889999999999999999998876432110000 000000 0
Q ss_pred ccccCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DSCLEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+..... .....+..+.+++.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000000 011235778999999999999999999999875
No 259
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=8.9e-40 Score=310.02 Aligned_cols=242 Identities=19% Similarity=0.242 Sum_probs=194.3
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-----ChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-----DSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv 128 (488)
.+.+.||+|+||.||+|.. .++..||+|++...... ....+.+|+.++++++||||+++++++.. +...+++
T Consensus 5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~ 84 (266)
T cd06651 5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIF 84 (266)
T ss_pred cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEE
Confidence 5567779999999999994 56899999998654311 13468899999999999999999998865 3568899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 85 MEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 99999999999986 3456899999999999999999999999 999999999999999999999999998754321
Q ss_pred -----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 207 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
....++..|+|||.+.+..++.++|||||||++|||++|+.||....... .............++...++.
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 237 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA----AIFKIATQPTNPQLPSHISEH 237 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH----HHHHHhcCCCCCCCchhcCHH
Confidence 12356889999999998889999999999999999999998875431111 111111111223344455677
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+..++ +||..+|++||++++++.|
T Consensus 238 ~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 238 ARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHHH-HHhcCChhhCcCHHHHhcC
Confidence 88888 6888899999999999876
No 260
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.2e-40 Score=315.81 Aligned_cols=240 Identities=20% Similarity=0.263 Sum_probs=197.3
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
..||+|+||.||++.. .++..||||.+........+.+.+|+.+++.++|+||+++++.+..++..++||||+++++|.
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence 4579999999999994 468899999987655444567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----CccccccC
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNLA 214 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~ 214 (488)
+++. ...+++.++..++.||+.||.|||+.+ ++||||||+||++++++.++|+|||++...... ....++..
T Consensus 108 ~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 183 (292)
T cd06658 108 DIVT---HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPY 183 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCcc
Confidence 9884 346899999999999999999999999 999999999999999999999999998754322 23457889
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|+|||.+.+..++.++||||||+++|||++|+.|+......... ............ .....+..+.+++.+||..||
T Consensus 184 y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P 260 (292)
T cd06658 184 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-RRIRDNLPPRVK--DSHKVSSVLRGFLDLMLVREP 260 (292)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhcCCCccc--cccccCHHHHHHHHHHccCCh
Confidence 99999998888999999999999999999999887643221110 001111111111 112345678999999999999
Q ss_pred CCCCCHHHHHHH
Q 011349 295 RERPNAKSLVAS 306 (488)
Q Consensus 295 ~~Rps~~~il~~ 306 (488)
.+|||+.+++++
T Consensus 261 ~~Rpt~~~il~~ 272 (292)
T cd06658 261 SQRATAQELLQH 272 (292)
T ss_pred hHCcCHHHHhhC
Confidence 999999999986
No 261
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.1e-41 Score=317.18 Aligned_cols=246 Identities=24% Similarity=0.373 Sum_probs=198.8
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChH--HHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSR--QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|++++.||+|+||+||++... +++.||+|++......... ...+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 467889999999999999954 5678999999876533222 3456999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC----CCCCc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS----RDGKS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~~ 208 (488)
++++|.+++. ....+++..+..++.||++||.+||+.+ ++|+||||+||+++.++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc--cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 9889999996 4567999999999999999999999999 999999999999999999999999998753 12234
Q ss_pred cccccCCCCccccc-cCCcccCCceEeehHHHHHHhhCCCCCCcchhh---hhhccccccccccccCCCCChhhHHHHHH
Q 011349 209 YSTNLAFTPPEYLR-TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD---LIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 209 ~~~t~~y~aPE~~~-~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
..++..|+|||.+. +...+.++||||||+++|+|++|..|+...... .............. .......+..+.+
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ 235 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS--SQQSREKSEELRD 235 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH--TTSHTTSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc--ccccchhHHHHHH
Confidence 56788999999998 788999999999999999999999887654111 00000000000000 0011112478999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||+.||++|||+.+++++
T Consensus 236 li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 236 LIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHSSSSGGGSTTHHHHHTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999875
No 262
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.2e-39 Score=307.12 Aligned_cols=245 Identities=18% Similarity=0.210 Sum_probs=202.1
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|++++.||+|+||.||++.. .+++.+|||.+...... ....+.+|+.+++.++||||+++++.+..++..++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 56778899999999999994 56888999998765322 3457899999999999999999999999889999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCCCCC---c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDGK---S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~~---~ 208 (488)
++++|.+++.......+++..+..++.+++.||.|||+++ ++|+||||+||+++++ +.++|+|||++....... .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (256)
T cd08220 82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT 160 (256)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence 9999999997544556899999999999999999999999 9999999999999855 457999999998665432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..++..|+|||.+.+..++.++||||||+++|+|++|+.|+.............. ......+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~ 235 (256)
T cd08220 161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS-----GTFAPISDRYSPDLRQLILS 235 (256)
T ss_pred cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh-----cCCCCCCCCcCHHHHHHHHH
Confidence 4578899999999988899999999999999999999988755422211111111 11112333457789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..+|++|||+.+++.+
T Consensus 236 ~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 236 MLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HccCChhhCCCHHHHhhC
Confidence 999999999999999976
No 263
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.3e-39 Score=306.99 Aligned_cols=245 Identities=26% Similarity=0.391 Sum_probs=199.5
Q ss_pred cccccCCCCCCceEEEEEeCC-C----cEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE-D----RWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+++.||.|+||.||++.... + ..||+|++...... ....+..|+.+++.++|+||+++++++.+.+..++|||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456788999999999999543 3 78999999766533 45689999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc--
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-- 208 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-- 208 (488)
|+++++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 999999999996433223999999999999999999999999 99999999999999999999999999876654321
Q ss_pred ---cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 209 ---YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 209 ---~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
..+++.|+|||.+.+..++.++||||||+++++|++ |.+|+.......... .+........+...+.++.+
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 235 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLE-----YLKKGYRLPKPENCPPEIYK 235 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHhcCCCCCCCCcCCHHHHH
Confidence 235688999999988889999999999999999999 666554322211111 11111112233346788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+||..+|++|||+.++++.|
T Consensus 236 ~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 236 LMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHCcCChhhCcCHHHHHhhC
Confidence 99999999999999999998764
No 264
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.1e-39 Score=313.39 Aligned_cols=243 Identities=19% Similarity=0.240 Sum_probs=202.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||++.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++..+...++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 457788999999999999994 4689999999875432 234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Ccc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSY 209 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 209 (488)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++..... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999999873 467999999999999999999999999 999999999999999999999999998876543 234
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.+++.|+|||.+.+...+.++||||||+++|+|++|..|+.......... .... ....++...+..+.+++.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~--~~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE----KILE--GKVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHhc--CCccCCccCCHHHHHHHHHH
Confidence 67899999999988888999999999999999999998876543211111 1111 11123444568899999999
Q ss_pred ccCCCCCCC-----CHHHHHHH
Q 011349 290 LQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rp-----s~~~il~~ 306 (488)
|..+|.+|+ ++.+++.+
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ccCCHHHccCcccCCHHHHHcC
Confidence 999999998 78888876
No 265
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.1e-39 Score=313.63 Aligned_cols=247 Identities=18% Similarity=0.260 Sum_probs=203.4
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
....+.+++.||+|+||.||++.. .++..||+|.+........+.+.+|+.+++.++||||+++++.+...+..++|+|
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 335567888999999999999984 5688899999876554456678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~ 172 (293)
T cd06647 97 YLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 172 (293)
T ss_pred cCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceeccccccccc
Confidence 999999999985 345889999999999999999999999 9999999999999999999999999886544322
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc-ccccCCCCChhhHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l 285 (488)
...+++.|++||.+.+..++.++|||||||++|++++|..||........ ..... ........+...+..+.++
T Consensus 173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l 248 (293)
T cd06647 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYLIATNGTPELQNPEKLSAIFRDF 248 (293)
T ss_pred ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh----eeehhcCCCCCCCCccccCHHHHHH
Confidence 33577889999999888899999999999999999999988764321110 00000 0111111223346789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||..+|++||++.+++.|
T Consensus 249 i~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 249 LNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHccCChhhCcCHHHHhcC
Confidence 999999999999999999987
No 266
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.9e-39 Score=314.31 Aligned_cols=246 Identities=20% Similarity=0.228 Sum_probs=199.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||+|.. .+++.||+|++....... ...+.+|+.+++.++||||+++++++..++..++|||
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e 95 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVME 95 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHH
Confidence 356777899999999999995 468899999987543222 2468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYS 210 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 210 (488)
|++ |+|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++..........
T Consensus 96 ~~~-g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~ 172 (307)
T cd06607 96 YCL-GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFV 172 (307)
T ss_pred hhC-CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCcc
Confidence 997 677776643 3456999999999999999999999999 9999999999999999999999999998776666677
Q ss_pred cccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 211 TNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 211 ~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
+++.|+|||++. ...++.++||||||+++|||+||.+|+........... ..........+...+..+.+++.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~ 248 (307)
T cd06607 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNDSPTLSSNDWSDYFRNFVD 248 (307)
T ss_pred CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH----HhcCCCCCCCchhhCHHHHHHHH
Confidence 889999999874 35688999999999999999999988754321111000 00000011112235678999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 011349 288 RCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l 307 (488)
+||..+|++||++.+++.+.
T Consensus 249 ~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 249 SCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred HHhcCChhhCcCHHHHhcCh
Confidence 99999999999999999864
No 267
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.1e-39 Score=314.26 Aligned_cols=240 Identities=20% Similarity=0.244 Sum_probs=198.1
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
..||+|+||.||+|.. .+++.||||.+........+.+.+|+.+++.++||||+++++++..++..++||||+++++|.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 4679999999999994 468899999997655455667899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----CccccccC
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNLA 214 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~ 214 (488)
.++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..
T Consensus 107 ~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 182 (297)
T cd06659 107 DIVS---QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPY 182 (297)
T ss_pred HHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCcc
Confidence 9874 356899999999999999999999999 999999999999999999999999998754332 23467899
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|+|||++.+..++.++|||||||++|||++|+.|+.......... ........ ........+..+.+++.+||..+|
T Consensus 183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~l~~~i~~~l~~~P 259 (297)
T cd06659 183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRDSPPP--KLKNAHKISPVLRDFLERMLTREP 259 (297)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhccCCC--CccccCCCCHHHHHHHHHHhcCCc
Confidence 999999998889999999999999999999998875432111100 00000000 011122345779999999999999
Q ss_pred CCCCCHHHHHHH
Q 011349 295 RERPNAKSLVAS 306 (488)
Q Consensus 295 ~~Rps~~~il~~ 306 (488)
.+||++.+++++
T Consensus 260 ~~Rps~~~ll~~ 271 (297)
T cd06659 260 QERATAQELLDH 271 (297)
T ss_pred ccCcCHHHHhhC
Confidence 999999999997
No 268
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=9.7e-40 Score=308.29 Aligned_cols=245 Identities=21% Similarity=0.230 Sum_probs=203.0
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
|++.+.||.|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++||||+++++++..+...++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 467888999999999999954 688999999975432 2356789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Cc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 208 (488)
+.|++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 82 LLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 999999999963 357999999999999999999999999 999999999999999999999999998765543 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..++..|+|||.+.+..++.++|+||||+++|+|++|..|+....... ...+...... .....+...+..+.+++.+
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~ 235 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQIRAKQET-ADVLYPATWSTEAIDAINK 235 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHHHHHhcc-ccccCcccCcHHHHHHHHH
Confidence 457789999999988889999999999999999999998876543110 0001111111 2233445567899999999
Q ss_pred hccCCCCCCCCH--HHHHHH
Q 011349 289 CLQYEPRERPNA--KSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~--~~il~~ 306 (488)
||..||.+||++ ++++++
T Consensus 236 ~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 236 LLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred HccCChhHcCCccHHHHhcC
Confidence 999999999999 776643
No 269
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.2e-39 Score=308.86 Aligned_cols=243 Identities=19% Similarity=0.205 Sum_probs=195.7
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-----ChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-----DSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
+.+.+.||+|+||.||+|.. .++..||||.+...... ..+.+.+|+.++++++||||+++++++.+. ..+++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence 46677889999999999994 56899999998643211 134688899999999999999999988663 46889
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++....
T Consensus 84 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 84 FMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 9999999999999863 356889999999999999999999999 99999999999999999999999999875432
Q ss_pred -----CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 206 -----GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 206 -----~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
.....++..|+|||.+.+..++.++|||||||++|||++|+.|+........ .............+...+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 236 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA----IFKIATQPTNPVLPPHVSD 236 (265)
T ss_pred ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH----HHHHhcCCCCCCCchhhCH
Confidence 1234578899999999888899999999999999999999988754311111 1111111122334455667
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+++.+|+. +|.+||++++++.+
T Consensus 237 ~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 237 HCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 88999999994 99999999999876
No 270
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=8.7e-40 Score=313.15 Aligned_cols=248 Identities=19% Similarity=0.181 Sum_probs=194.4
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+++.||+|+||.||+|.. .+|+.||+|.++..... ....+.+|+.++++++||||+++++++.+....++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 46778899999999999995 56899999998754322 2346788999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... ..
T Consensus 82 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 82 D-QDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred C-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 7 578887754 3456999999999999999999999999 999999999999999999999999998865432 23
Q ss_pred cccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchh-hhhhcc--------------ccccccccccC-
Q 011349 209 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHAL-DLIRGK--------------NFLMLMDSCLE- 271 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~-~~~~~~--------------~~~~~~~~~~~- 271 (488)
..+++.|+|||.+.+. .++.++|||||||++|+|+||+.|+..... ...... ......+....
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 4567899999998764 468899999999999999999987532211 000000 00000000000
Q ss_pred --------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 272 --------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 272 --------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.......+.++.+++.+||..||.+|||+.+++.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 01112345788999999999999999999999876
No 271
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.7e-40 Score=334.36 Aligned_cols=247 Identities=18% Similarity=0.200 Sum_probs=188.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC------CCcccccceecC-Ceee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE------RLVNLIGCCCEG-EERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~-~~~~ 126 (488)
.|.+++.||+|+||+||+|.. .+++.||||+++... .....+..|+.+++.++|. +++++++++... ...+
T Consensus 130 ~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~ 208 (467)
T PTZ00284 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMC 208 (467)
T ss_pred cEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEE
Confidence 467888999999999999994 568889999996432 2234567788888877654 578888888654 5789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCC---------------
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDG--------------- 190 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~--------------- 190 (488)
+|||++ |++|.+++. ..+.+++..+..|+.||+.||.|||++ + ||||||||+|||++.++
T Consensus 209 iv~~~~-g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 209 IVMPKY-GPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEecc-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 999998 688988886 346799999999999999999999984 8 99999999999998665
Q ss_pred -CCeeccCCCcccCCC-CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc------ccc
Q 011349 191 -NPRLSCFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG------KNF 262 (488)
Q Consensus 191 -~~kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~------~~~ 262 (488)
.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... ..+
T Consensus 285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~ 364 (467)
T PTZ00284 285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL 364 (467)
T ss_pred ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 489999998865433 235678999999999999999999999999999999999999886532110000 000
Q ss_pred -------------ccccccc--cCCCC---------------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 -------------LMLMDSC--LEGHF---------------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 -------------~~~~~~~--~~~~~---------------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.... +.... .....+.+.+||.+||..||.+|||+.++++|
T Consensus 365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 0000000 00000 00123567899999999999999999999997
No 272
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=292.99 Aligned_cols=248 Identities=21% Similarity=0.278 Sum_probs=198.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+-.+++.||+|+.|.|+++++ .+|...|||.+.... ....++++..++++...+ +|.||+.+|+|..+..+++.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 345678899999999999994 568999999997654 333456778888877774 89999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---c
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---S 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~ 208 (488)
|. --++.+++. -.+++++..+-++...++.||.||.++..|||||+||+|||+|+.|++||||||++.+..+.. .
T Consensus 173 Ms-~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtr 250 (391)
T KOG0983|consen 173 MS-TCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTR 250 (391)
T ss_pred HH-HHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccccc
Confidence 94 455555543 456799999999999999999999987669999999999999999999999999998776543 4
Q ss_pred cccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
..|-+.|||||.+.- .+|+.++||||||++|+||.||..|+.+...+......+....++.++.. ...++.++++
T Consensus 251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~--~gFSp~F~~f 328 (391)
T KOG0983|consen 251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGH--MGFSPDFQSF 328 (391)
T ss_pred ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcc--cCcCHHHHHH
Confidence 467789999999853 46888999999999999999999998875433222111221112222211 2257889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+..||.+|+.+||...++++|
T Consensus 329 v~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 329 VKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHhhcCcccCcchHHHhcC
Confidence 999999999999999999987
No 273
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.2e-39 Score=312.48 Aligned_cols=249 Identities=21% Similarity=0.276 Sum_probs=196.8
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.+++++.||+|+||.||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 3567889999999999999964 5889999998654322 245688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+++++|..+.. ....+++.++..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 99999988765 3345899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh------ccccc----------ccccccc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR------GKNFL----------MLMDSCL 270 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~------~~~~~----------~~~~~~~ 270 (488)
...++..|+|||++.+ ..++.++|||||||++|||++|++|+......... ...+. .......
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 2356789999999875 45788999999999999999999877543210000 00000 0000000
Q ss_pred CC---------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 271 EG---------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 271 ~~---------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ...+..+..+.+++.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00 0112346789999999999999999999999876
No 274
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.8e-39 Score=306.29 Aligned_cols=243 Identities=20% Similarity=0.250 Sum_probs=199.5
Q ss_pred cccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-----ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-----DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+.||+|+||.||+|... ++..|++|.+...... ..+.+.+|+.+++.++|+||+++++++..+...++|||
T Consensus 3 ~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 82 (258)
T cd06632 3 RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLE 82 (258)
T ss_pred cccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEE
Confidence 45567899999999999955 7899999998654321 24578999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---C
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---K 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 207 (488)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... .
T Consensus 83 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~ 159 (258)
T cd06632 83 LVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAK 159 (258)
T ss_pred ecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceecccccccc
Confidence 9999999999863 456899999999999999999999999 999999999999999999999999998765433 2
Q ss_pred ccccccCCCCccccccCC-cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...++..|++||.+.... ++.++|+|||||++|+|++|+.|+........ .............+...++.+.+++
T Consensus 160 ~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li 235 (258)
T cd06632 160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA----VFKIGRSKELPPIPDHLSDEAKDFI 235 (258)
T ss_pred ccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH----HHHHHhcccCCCcCCCcCHHHHHHH
Confidence 445788999999987766 89999999999999999999988754321110 0001110111233445568899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||..+|.+||++.+++.+
T Consensus 236 ~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 236 LKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHHhhcCcccCcCHHHHhcC
Confidence 99999999999999999875
No 275
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.8e-39 Score=314.21 Aligned_cols=247 Identities=17% Similarity=0.129 Sum_probs=197.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||++.. .+++.||||.+..... .....+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 356788899999999999995 4578899999876542 223468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 9999999999963 456999999999999999999999999 99999999999999999999999999863210
Q ss_pred --------------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC
Q 011349 206 --------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 206 --------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
.....++..|+|||.+.+..++.++|||||||++|||++|..|+.+............... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~---~~ 235 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI---EW 235 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc---CC
Confidence 0123467789999999888899999999999999999999998865432221111111000 00
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.......+.++.+++.+||+.+|++||++.++.+.|
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 236 PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred CCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 111123567899999999999999999854444443
No 276
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.4e-39 Score=305.45 Aligned_cols=244 Identities=20% Similarity=0.293 Sum_probs=200.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+.+.||+|+||.||+|.. .+++.|++|.++..... ..+.+..|+.+++.++|+||+++++++...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 56778899999999999994 47889999999866543 4567999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
++++|.+++. ....+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~ 158 (264)
T cd06626 82 SGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE 158 (264)
T ss_pred CCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence 9999999986 3456899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ---ccccccCCCCccccccCC---cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh--hhH
Q 011349 208 ---SYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN--DDG 279 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 279 (488)
...++..|+|||++.+.. .+.++||||||+++|++++|..||.............. .......+. ..+
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 234 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG----AGHKPPIPDSLQLS 234 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh----cCCCCCCCcccccC
Confidence 235678999999998766 88999999999999999999998754311110000000 011111222 236
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.+++.+||+.+|.+|||+.+++.+
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 788999999999999999999999865
No 277
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.3e-39 Score=314.06 Aligned_cols=250 Identities=18% Similarity=0.245 Sum_probs=202.4
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..++.||+|+||.||+|.. .++..||+|++....... ...+.+|++++++++|||++++++++..+...++||||+
T Consensus 28 ~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 107 (317)
T cd06635 28 TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYC 107 (317)
T ss_pred hhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCC
Confidence 4567789999999999994 568899999987543222 346889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t 212 (488)
. |+|.+.+.. ...++++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........++
T Consensus 108 ~-g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (317)
T cd06635 108 L-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGT 184 (317)
T ss_pred C-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCC
Confidence 7 577777653 3456999999999999999999999999 999999999999999999999999998877666667789
Q ss_pred cCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 213 LAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 213 ~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+.|+|||++. ++.++.++|||||||++|||++|+.|+........ ...+.........+...++.+.+++.+|
T Consensus 185 ~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~ 260 (317)
T cd06635 185 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPTLQSNEWSDYFRNFVDSC 260 (317)
T ss_pred ccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHHhccCCCCCCccccHHHHHHHHHH
Confidence 9999999974 45688999999999999999999988754321110 0111111111112234567899999999
Q ss_pred ccCCCCCCCCHHHHHHHhchhhcc
Q 011349 290 LQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
|+.+|.+||++.+++.++..+...
T Consensus 261 l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 261 LQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred ccCCcccCcCHHHHHhChhhhccC
Confidence 999999999999999987655443
No 278
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.9e-39 Score=307.82 Aligned_cols=252 Identities=14% Similarity=0.145 Sum_probs=197.2
Q ss_pred HHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec
Q 011349 44 DQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE 121 (488)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 121 (488)
.++....++|...+.++ ||+|+||.||++. ..++..+|+|.+........ |+.....+ +||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 7 SELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence 34444445554333333 5999999999999 45688899999875432221 22222223 69999999999999
Q ss_pred CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCc
Q 011349 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLM 200 (488)
Q Consensus 122 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla 200 (488)
++..++||||+++++|.+++.. ...+++.++..++.||+.||.|||+.+ ++||||||+||+++.++ .++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999999963 347999999999999999999999999 99999999999999888 9999999999
Q ss_pred ccCCCCCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 201 KNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 201 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
+.........++..|+|||++.+..++.++|||||||++|||++|+.|+............+...... ....+...++
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (267)
T PHA03390 158 KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK--KLPFIKNVSK 235 (267)
T ss_pred eecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc--cCCcccccCH
Confidence 87776666778999999999998889999999999999999999998876432221111111111111 1122335678
Q ss_pred HHHHHHHHhccCCCCCCCC-HHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPN-AKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps-~~~il~~ 306 (488)
.+.+++.+||+.+|.+||+ ++++++|
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 236 NANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHHHHHHHhccChhhCCchHHHHhcC
Confidence 8999999999999999995 6999865
No 279
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2e-39 Score=307.80 Aligned_cols=246 Identities=20% Similarity=0.281 Sum_probs=199.6
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
...+.||+|++|.||+|. ..+++.||+|.+...... ..+.+.+|+.++++++|+||+++++++.+++..++||
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~ 82 (268)
T cd06630 3 LKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFV 82 (268)
T ss_pred cccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEE
Confidence 455677999999999998 567899999998754321 1356889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~-- 206 (488)
||++|++|.+++. ...++++..+..++.||+.||.|||+.+ ++|+||||+||+++.++ .++|+|||++......
T Consensus 83 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 83 EWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT 159 (268)
T ss_pred eccCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence 9999999999986 3457899999999999999999999999 99999999999998776 5999999998765432
Q ss_pred ------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 ------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....++..|+|||.+.+..++.++||||||+++++|++|..|+......... ...............+...++
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL-ALIFKIASATTAPSIPEHLSP 238 (268)
T ss_pred cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH-HHHHHHhccCCCCCCchhhCH
Confidence 1235678999999998888999999999999999999999887533211000 001111111122344555678
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+++.+||..+|.+||++.+++.+
T Consensus 239 ~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 239 GLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 89999999999999999999999875
No 280
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.1e-39 Score=309.08 Aligned_cols=248 Identities=20% Similarity=0.278 Sum_probs=201.6
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+++.||.|++|.||++... +++.||+|.+..... .....+.+|++++++++||||+++++.+......++|+||++
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD 82 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence 456778899999999999954 688999999876542 234578999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYS 210 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~ 210 (488)
+++|.+++... ...+++..+..++.|++.||.|||+ .+ ++|+||||+||++++++.++|+|||.+...... ....
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (265)
T cd06605 83 GGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV 160 (265)
T ss_pred CCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhccc
Confidence 99999998642 2678999999999999999999999 88 999999999999999999999999998755322 1256
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-ccccccccccccCCCCChh-hHHHHHHHHHH
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-GKNFLMLMDSCLEGHFSND-DGTELVRLASR 288 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~ 288 (488)
++..|+|||.+.+..++.++||||||+++|+|++|+.|+......... .......... .....+.. .+.++.++|.+
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~ 239 (265)
T cd06605 161 GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPRLPSGKFSPDFQDFVNL 239 (265)
T ss_pred CChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCCCChhhcCHHHHHHHHH
Confidence 788999999999889999999999999999999999887543110000 0001111111 11122222 56789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..+|.+|||+.+++.+
T Consensus 240 ~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 240 CLIKDPRERPSYKELLEH 257 (265)
T ss_pred HcCCCchhCcCHHHHhhC
Confidence 999999999999999876
No 281
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.3e-39 Score=309.08 Aligned_cols=242 Identities=17% Similarity=0.278 Sum_probs=200.5
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.++++||.|+||.||+|.. .++..||||.+..... .....+.+|+.++.+++||||+++++++..+...++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 35677889999999999984 5688999999865432 223578899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 209 (488)
+++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... ..
T Consensus 86 ~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06641 86 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence 999999884 456899999999999999999999999 9999999999999999999999999987654322 34
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.++..|+|||.+.+..++.++|||||||++|+|++|..|+........ ...+........+...+.++.+++.+|
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV-----LFLIPKNNPPTLEGNYSKPLKEFVEAC 236 (277)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH-----HHHHhcCCCCCCCcccCHHHHHHHHHH
Confidence 568889999999888899999999999999999999988754321111 011111112223345568899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|..+|.+||++.+++.+
T Consensus 237 l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 237 LNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCChhhCcCHHHHHhC
Confidence 99999999999999997
No 282
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.3e-39 Score=310.46 Aligned_cols=248 Identities=21% Similarity=0.276 Sum_probs=198.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+.+.||.|+||.||+|.. .+|+.||||++..... .....+.+|+.++++++||||+++++++..+...++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 56788899999999999995 5689999999976542 22467999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
+++|.+++.. ....+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 -~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 82 -PSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred -CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 9999998864 3366999999999999999999999999 9999999999999999999999999988664432
Q ss_pred ccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc--------------------ccccc
Q 011349 208 SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------------------FLMLM 266 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------------------~~~~~ 266 (488)
...++..|+|||.+.+. .++.++|||||||+++||+||.+++............ .....
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT 238 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence 34578899999998754 4688999999999999999997666443211000000 00000
Q ss_pred cccc----CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DSCL----EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... ........+..+.+++.+||..+|.+|||+++++.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 000112345789999999999999999999999987
No 283
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.1e-39 Score=311.70 Aligned_cols=257 Identities=16% Similarity=0.172 Sum_probs=201.8
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccc
Q 011349 41 FNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGC 118 (488)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~ 118 (488)
+++.++..++++| .+++.||+|+||.||+|.. .+++.+|+|++.... .....+.+|+.+++++ +|||+++++++
T Consensus 12 ~~~~~~~~~~~~y---~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 12 LGLESLGDPTDTW---EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred hhcccCCCCCCCe---EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 4555666666665 6778889999999999994 568899999986543 2345788999999999 79999999999
Q ss_pred eecC-----CeeeEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 119 CCEG-----EERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 119 ~~~~-----~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
+... +..++||||++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCC
Confidence 8653 3589999999999999987531 3456899999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCC----CccccccCCCCccccccC-----CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc
Q 011349 192 PRLSCFGLMKNSRDG----KSYSTNLAFTPPEYLRTG-----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~-----~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 262 (488)
+||+|||++...... ....++..|+|||.+... .++.++|||||||++|||++|+.|+........ .
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~----~ 242 (291)
T cd06639 167 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT----L 242 (291)
T ss_pred EEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH----H
Confidence 999999998765432 234578899999998643 368899999999999999999988754321110 0
Q ss_pred cccccc-ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLMDS-CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... ......+...+..+.+++.+||+.+|++||++.+++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 243 FKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 000000 00011122345679999999999999999999999986
No 284
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.9e-39 Score=305.83 Aligned_cols=245 Identities=18% Similarity=0.232 Sum_probs=202.1
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e 130 (488)
|++++.||.|+||.||++. ..++..||+|.++..... ..+.+..|+.++++++||||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 5678889999999999998 456889999998754432 23468899999999999999999997754 456899999
Q ss_pred cCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 131 FMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCS-----SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 131 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
|+++++|.+++... ....+++..++.++.||+.||.||| +.+ ++|+||||+||++++++.+||+|||++...
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEecccccccc
Confidence 99999999998642 2467999999999999999999999 888 999999999999999999999999998876
Q ss_pred CCCC----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 204 RDGK----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 204 ~~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
.... ...+++.|+|||.+.+..++.++||||||+++++|++|..|+........ ...+........+...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 235 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQL-----ASKIKEGKFRRIPYRYS 235 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHH-----HHHHhcCCCCCCccccC
Confidence 5433 34678999999999988899999999999999999999988765422111 11111112223444567
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.+++.+||..+|++||++.+|+++
T Consensus 236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 236 SELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 889999999999999999999999986
No 285
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-40 Score=293.95 Aligned_cols=242 Identities=19% Similarity=0.229 Sum_probs=205.4
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChH---HHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSR---QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...++.||+|+||.|.+++ ..+|+.+|+|++++...-..+ .-..|-++|+..+||.+..+--.|...+++|+||||
T Consensus 170 FdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMey 249 (516)
T KOG0690|consen 170 FDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEY 249 (516)
T ss_pred hhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEE
Confidence 3567889999999999999 678999999999877644433 346789999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC----CCC
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGK 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~ 207 (488)
..||.|.-+|. ..+.+++.....+..+|+.||.|||+++ ||+||||.+|.|+|.+|++||+||||++... ...
T Consensus 250 anGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k 326 (516)
T KOG0690|consen 250 ANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK 326 (516)
T ss_pred ccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccceec
Confidence 99999999887 4567999999999999999999999999 9999999999999999999999999998543 345
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
+++|||.|+|||++....|..+.|.|.+||++|||++|+.||+.......-.- ++-. .-.+|...+++...|+.
T Consensus 327 TFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeL----Il~e--d~kFPr~ls~eAktLLs 400 (516)
T KOG0690|consen 327 TFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFEL----ILME--DLKFPRTLSPEAKTLLS 400 (516)
T ss_pred cccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHH----HHhh--hccCCccCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999876533221111 1111 12466677889999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 011349 288 RCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rp-----s~~~il~~ 306 (488)
.+|.+||.+|. .+.+|.+|
T Consensus 401 GLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 401 GLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred HHhhcChHhhcCCCchhHHHHHhh
Confidence 99999999995 45566554
No 286
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.7e-39 Score=311.72 Aligned_cols=248 Identities=20% Similarity=0.251 Sum_probs=194.2
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
..++.||+|+||.||++.. .+++.||||.+...... ....+.+|+.++.++. |+||+++++++..+...+++|||+.
T Consensus 7 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~ 86 (288)
T cd06616 7 KDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD 86 (288)
T ss_pred HHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc
Confidence 3456789999999999994 56899999998754322 3457889999999996 9999999999998889999999996
Q ss_pred CCChhhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 134 NETLSKHL---FHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 134 ~gsL~~~l---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
++|.++. .......+++..+..++.+++.||.|||+. + ++||||||+||+++.++.++|+|||+++.....
T Consensus 87 -~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 164 (288)
T cd06616 87 -ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK 164 (288)
T ss_pred -CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc
Confidence 5665543 222346799999999999999999999985 7 999999999999999999999999998754432
Q ss_pred CccccccCCCCccccccC---CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTG---RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~---~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....+++.|+|||.+.+. .++.++|||||||++|||++|+.||..................+......+...+.++.
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (288)
T cd06616 165 TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFV 244 (288)
T ss_pred ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHH
Confidence 234578899999999765 68899999999999999999998876432110000000000111111222234677899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+|+.+||+.+|++|||+.+|+.+
T Consensus 245 ~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 245 NFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999987
No 287
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.2e-39 Score=314.33 Aligned_cols=243 Identities=14% Similarity=0.213 Sum_probs=184.5
Q ss_pred ccCCCCCCceEEEEEeC---CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~ 134 (488)
.+||+|+||.||+|... ++..||+|.+.... ....+.+|+.+++.++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 46899999999999854 35789999987543 23568899999999999999999998854 457899999996
Q ss_pred CChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee----cCCCCCeeccCCCcccC
Q 011349 135 ETLSKHLFHW-------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 135 gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 203 (488)
++|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 5777776421 2235889999999999999999999999 9999999999999 56679999999999865
Q ss_pred CCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc----------------
Q 011349 204 RDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG---------------- 259 (488)
Q Consensus 204 ~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~---------------- 259 (488)
... ....+|+.|+|||.+.+ ..++.++|||||||++|||+||++||.....+....
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 432 23467899999999876 457899999999999999999998875321110000
Q ss_pred ----cccc---------cccccccC------------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 ----KNFL---------MLMDSCLE------------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 ----~~~~---------~~~~~~~~------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+. ........ ..........+.+|+.+||..||.+|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000 00000000 00011123568899999999999999999999975
No 288
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4e-39 Score=306.71 Aligned_cols=247 Identities=15% Similarity=0.182 Sum_probs=197.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCC------ee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGE------ER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~------~~ 125 (488)
+.|.+++.||.|++|.||+|.. .+++.|++|++.... ...+.+.+|+.+++++ .|+||+++++++.... ..
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 3457888999999999999995 467889999987654 2356799999999999 6999999999986544 48
Q ss_pred eEEEecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 126 LLVAEFMPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
++||||+++++|.+++.... +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceec
Confidence 99999999999999886432 467999999999999999999999999 999999999999999999999999998754
Q ss_pred CCC----CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc-CCC
Q 011349 204 RDG----KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL-EGH 273 (488)
Q Consensus 204 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 273 (488)
... ....++..|+|||.+.. ..++.++|||||||++++|+||..|+........ ......... ...
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~ 239 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA----LFKIPRNPPPTLK 239 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH----HHHhhccCCCCCC
Confidence 332 23457889999998754 3467899999999999999999988754311111 011111111 111
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+...+..+.+++.+||..||++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 240 SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 122356789999999999999999999999875
No 289
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.2e-39 Score=309.51 Aligned_cols=249 Identities=19% Similarity=0.254 Sum_probs=194.5
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||.|++|.||+|... +++.||||.+...... ....+.+|++++++++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 45678889999999999999954 6889999998754322 234577899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+. ++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 85 ~~-~~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (291)
T cd07844 85 LD-TDLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYS 161 (291)
T ss_pred CC-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCcccc
Confidence 97 599988864 2346899999999999999999999999 999999999999999999999999998754321 1
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhh--hhh----------cccccccc--------
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD--LIR----------GKNFLMLM-------- 266 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~--~~~----------~~~~~~~~-------- 266 (488)
...++..|+|||.+.+ ..++.++|||||||++|+|++|..||...... ... ...+....
T Consensus 162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07844 162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPY 241 (291)
T ss_pred ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccc
Confidence 2345788999999876 45788999999999999999999887543210 000 00000000
Q ss_pred ------ccccCCCCChhhH--HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 ------DSCLEGHFSNDDG--TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ------~~~~~~~~~~~~~--~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........ .... ..+.+++.+||..+|++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 242 SFPFYPPRPLINHA-PRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccCChhHHHhC-cCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000000 0112 678899999999999999999999875
No 290
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3e-39 Score=309.47 Aligned_cols=241 Identities=20% Similarity=0.261 Sum_probs=197.9
Q ss_pred cccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 59 VSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
.+.||+|++|.||++.. .+++.|++|++........+.+.+|+.+++.++||||+++++++..++..++|+||++|++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 45679999999999994 56889999998765544456789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNL 213 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~ 213 (488)
.+++.. ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....+++
T Consensus 104 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 179 (285)
T cd06648 104 TDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 179 (285)
T ss_pred HHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCc
Confidence 999853 56899999999999999999999999 999999999999999999999999987654332 2345788
Q ss_pred CCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 214 ~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
.|+|||.+.+..++.++|||||||++|||++|+.|+.......... .......... ..+...+..+.+++.+||..+
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~ 256 (285)
T cd06648 180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK-RIRDNLPPKL--KNLHKVSPRLRSFLDRMLVRD 256 (285)
T ss_pred cccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH-HHHhcCCCCC--cccccCCHHHHHHHHHHcccC
Confidence 9999999998889999999999999999999998875432111100 0111111111 112235678999999999999
Q ss_pred CCCCCCHHHHHHH
Q 011349 294 PRERPNAKSLVAS 306 (488)
Q Consensus 294 p~~Rps~~~il~~ 306 (488)
|++|||+.+++++
T Consensus 257 p~~Rpt~~~il~~ 269 (285)
T cd06648 257 PAQRATAAELLNH 269 (285)
T ss_pred hhhCcCHHHHccC
Confidence 9999999999976
No 291
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.2e-39 Score=305.62 Aligned_cols=242 Identities=19% Similarity=0.259 Sum_probs=198.2
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcC---CCCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLR---SERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e 130 (488)
|.+++.||.|+||.||+|.. .+++.||||.++... ......+.+|+.+++.++ |||++++++++..+...++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 45677889999999999994 578999999987543 233567889999999996 9999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++|++|.+++. ...+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 83 YAEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred cCCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 999999999885 347999999999999999999999999 9999999999999999999999999987654432
Q ss_pred -ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh-hhHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN-DDGTELVR 284 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ 284 (488)
...++..|+|||.+.+ ..++.++|||||||++|+|++|..|+.......... ..........+. ..+.++.+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 233 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-----LIPKSKPPRLEDNGYSKLLRE 233 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-----ccccCCCCCCCcccCCHHHHH
Confidence 3467889999999875 446889999999999999999998875432211110 011111111222 25678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||..||++||++.+++.+
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhC
Confidence 9999999999999999999985
No 292
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.2e-39 Score=308.37 Aligned_cols=249 Identities=20% Similarity=0.236 Sum_probs=196.4
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|++++.||.|++|.||+|.. .+|+.||||.+...... ....+.+|++++++++||||+++++++.+++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 46778889999999999995 46889999998754322 2357889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
. ++|..++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 6 68988886545567999999999999999999999999 999999999999999999999999998755432 22
Q ss_pred cccccCCCCccccccCC-cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc--------------------cccc
Q 011349 209 YSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL--------------------MLMD 267 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~-~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--------------------~~~~ 267 (488)
..+++.|+|||.+.+.. ++.++|||||||++|||+||+.||.............. ....
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 34578899999887644 58899999999999999999988765422110000000 0000
Q ss_pred cccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 SCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 ~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..... ......+..+.+++.+||+.||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000 0111245678899999999999999999999875
No 293
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.2e-39 Score=304.15 Aligned_cols=246 Identities=20% Similarity=0.275 Sum_probs=204.0
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++.+.||.|++|.||+|... +++.|+||++..... .....+.+|+..+.+++|+||+++++++......++||||++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD 82 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence 467788999999999999955 599999999876653 235679999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
+++|.+++.. ...+++..++.++.|+++||.|||+ .+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 83 ~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 159 (264)
T cd06623 83 GGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT 159 (264)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcccc
Confidence 9999999963 3679999999999999999999999 98 9999999999999999999999999988664432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh-hHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND-DGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 287 (488)
..++..|+|||.+.+..++.++||||||+++|+|+||..|+........ ......+.. ......+.. .+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~ 237 (264)
T cd06623 160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF-FELMQAICD-GPPPSLPAEEFSPEFRDFIS 237 (264)
T ss_pred eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCH-HHHHHHHhc-CCCCCCCcccCCHHHHHHHH
Confidence 4567899999999988899999999999999999999988755421000 000011111 111222333 5788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..+|++||++.+++++
T Consensus 238 ~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 238 ACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHccCChhhCCCHHHHHhC
Confidence 9999999999999999986
No 294
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5.1e-39 Score=307.62 Aligned_cols=247 Identities=19% Similarity=0.262 Sum_probs=193.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHH-HhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARA-VGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
++.+++.||+|+||.||+|.. .+|+.||||+++.... .....+..|+.+ ++.++||||+++++++..++..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 356788899999999999995 4699999999876532 223456667765 5566899999999999999999999999
Q ss_pred CCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 132 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
++ |+|.+++... ....+++..++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 97 7888777542 335799999999999999999999997 7 9999999999999999999999999988654322
Q ss_pred --ccccccCCCCcccccc----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 --SYSTNLAFTPPEYLRT----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...++..|+|||.+.+ ..++.++|+|||||++|+|++|+.|+........ ..................+.+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ---QLKQVVEEPSPQLPAEKFSPE 236 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH---HHHHHHhcCCCCCCccccCHH
Confidence 2457889999998865 4468899999999999999999988753211100 011111111111111234678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+++.+||..+|.+||++.+++.+
T Consensus 237 l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 237 FQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999999986
No 295
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.4e-39 Score=307.19 Aligned_cols=251 Identities=18% Similarity=0.220 Sum_probs=198.9
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~ 131 (488)
+.++++||.|++|.||+|.. .+++.||+|.+..... .....+.+|++++++++||||+++++++... ..+++||||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 82 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY 82 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence 46678889999999999995 4688899999875432 2345799999999999999999999988653 468999999
Q ss_pred CCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--C
Q 011349 132 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~ 207 (488)
++|++|.+++.. .....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... .
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (287)
T cd06621 83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG 161 (287)
T ss_pred cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence 999999987653 13456899999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc----ccccCCCCC--hhhHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM----DSCLEGHFS--NDDGTE 281 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~ 281 (488)
...++..|+|||.+.+..++.++|||||||++|+|++|..|+................+ ......... ...++.
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (287)
T cd06621 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEE 241 (287)
T ss_pred cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHH
Confidence 34568899999999988999999999999999999999988764411000000000000 001111111 234678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+++.+||..+|++|||+.+++.+-
T Consensus 242 ~~~li~~~l~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 242 FKDFIKQCLEKDPTRRPTPWDMLEHP 267 (287)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHhCc
Confidence 99999999999999999999999873
No 296
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5.7e-39 Score=304.97 Aligned_cols=248 Identities=17% Similarity=0.247 Sum_probs=198.5
Q ss_pred ccccccCCCCCCceEEEEEeCC--CcEEEEEEccCCCC----------CChHHHHHHHHHHhh-cCCCCCcccccceecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDE--DRWIAVKRFNRSAW----------PDSRQFLEEARAVGL-LRSERLVNLIGCCCEG 122 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~ 122 (488)
|.+.+.||+|+||.||+|.... ++.+|||.+..... ....++.+|+.++.+ ++||||+++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 4567788999999999999644 78899998864321 123457788888875 6999999999999999
Q ss_pred CeeeEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCC
Q 011349 123 EERLLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
+..++||||++|++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||||+||++++++.++|+|||+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccc
Confidence 999999999999999988743 134568999999999999999999996 56 99999999999999999999999999
Q ss_pred cccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 200 MKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 200 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
+...... ....++..|++||.+.+..++.++||||||+++|+|++|+.|+.......... ........+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~ 236 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLAT----KIVEAVYEPLPEG 236 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHH----HHhhccCCcCCcc
Confidence 9865543 24467889999999998889999999999999999999998875432211111 1111111111112
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
..++.+.+++.+||+.||++||++.++.++++
T Consensus 237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 237 MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 34678999999999999999999999999875
No 297
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6e-39 Score=307.66 Aligned_cols=246 Identities=18% Similarity=0.237 Sum_probs=201.4
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+...+|+|++|.||+|... ++..|++|++..... ..+.+.+|+++++.++|+||+++++++......++|+||++
T Consensus 20 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 98 (286)
T cd06614 20 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMD 98 (286)
T ss_pred cchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccC
Confidence 3456677899999999999965 688899999976543 45678999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
|++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 99 ~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 176 (286)
T cd06614 99 GGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSV 176 (286)
T ss_pred CCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccc
Confidence 999999997422 37999999999999999999999999 999999999999999999999999987654432 233
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.++..|++||.+.+..++.++|||||||++|+|++|..|+.............. ........+...+..+.+++.+|
T Consensus 177 ~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~ 253 (286)
T cd06614 177 VGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT---KGIPPLKNPEKWSPEFKDFLNKC 253 (286)
T ss_pred cCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cCCCCCcchhhCCHHHHHHHHHH
Confidence 567899999999888899999999999999999999988754321111000000 00001111223567899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|+.+|.+||++.+++.+
T Consensus 254 l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 254 LVKDPEKRPSAEELLQH 270 (286)
T ss_pred hccChhhCcCHHHHhhC
Confidence 99999999999999986
No 298
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.7e-39 Score=305.15 Aligned_cols=248 Identities=20% Similarity=0.269 Sum_probs=194.7
Q ss_pred cccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCC------e
Q 011349 57 NIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGE------E 124 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 124 (488)
.+.+.||+|+||.||+|.+. ++..||||++..... ...+.+.+|+++++.++||||+++++++.... .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 45677899999999999843 367899999875432 23457889999999999999999999886532 2
Q ss_pred eeEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 125 RLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
.++++||+.+|+|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECccccc
Confidence 47899999999998877421 1235889999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCC
Q 011349 201 KNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 201 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+...... ...+++.|++||.+.+..++.++|||||||++|||++ |.+|+.......... .+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~ 235 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYN-----YLIKGNRLK 235 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHH-----HHHcCCcCC
Confidence 8654322 2234568999999988889999999999999999999 666654332111100 000001112
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.+...+..+.+++.+||+.+|++|||+.+++..|+.+
T Consensus 236 ~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2234567899999999999999999999999999865
No 299
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=345.74 Aligned_cols=241 Identities=18% Similarity=0.236 Sum_probs=200.4
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 59 VSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
...||.|.||.||.|. .++|...|+|-++... ......+.+|+.++..+.|||+|+++|+=.+.+..+|.||||+||
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 3456999999999999 7789999999886433 233457889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--------
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-------- 207 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------- 207 (488)
+|.+++. .++..++.....+..|++.|+.|||++| ||||||||+||+++.+|.+|++|||.|..+....
T Consensus 1320 sLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~ 1396 (1509)
T KOG4645|consen 1320 SLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQ 1396 (1509)
T ss_pred cHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHH
Confidence 9999997 3455778888889999999999999999 9999999999999999999999999998765432
Q ss_pred ccccccCCCCccccccCC---cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...||+.|||||++.+.. -..+.||||||||++||+||+.||....... .+.--+.....+.+|...+.+-.+
T Consensus 1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~----aIMy~V~~gh~Pq~P~~ls~~g~d 1472 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW----AIMYHVAAGHKPQIPERLSSEGRD 1472 (1509)
T ss_pred hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh----HHHhHHhccCCCCCchhhhHhHHH
Confidence 467899999999998733 4568999999999999999999875321110 011111112234566668899999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||..||..|+++.+++++
T Consensus 1473 Fle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1473 FLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HHHHHHhcCchhhhHHHHHHHh
Confidence 9999999999999999999987
No 300
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=7.8e-39 Score=302.81 Aligned_cols=240 Identities=18% Similarity=0.214 Sum_probs=198.3
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||.|++|.||+|.. .+++.||+|++...... ..+.+.+|+.+++.++||||+++++.+.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 59999999999995 45889999999754422 245789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---CccccccC
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLA 214 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~ 214 (488)
.+++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILR--DRGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 99996 3456899999999999999999999999 999999999999999999999999999876543 23457889
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|++||.+.+..++.++|+||||+++|+|++|..|+.....+.. ..............++...+..+.+++.+||..+|
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 235 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM--EIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNP 235 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH--HHHHHHhccCCCCCCCcccCHHHHHHHHHHccCCh
Confidence 9999999888899999999999999999999988765431100 00111111112233444457889999999999999
Q ss_pred CCCCC-----HHHHHHH
Q 011349 295 RERPN-----AKSLVAS 306 (488)
Q Consensus 295 ~~Rps-----~~~il~~ 306 (488)
++||+ +.+++++
T Consensus 236 ~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 236 EERLGNLKGGIKDIKKH 252 (262)
T ss_pred hhCcCCcccCHHHHhcC
Confidence 99999 8888875
No 301
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.8e-39 Score=308.58 Aligned_cols=249 Identities=22% Similarity=0.297 Sum_probs=198.4
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.+++++.||+|+||.||+|... +++.||||+++.... .....+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 3577888999999999999954 688999999875432 2346789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
++++.+..++. ....+++.++..++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 82 VERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99877766554 3456899999999999999999999999 9999999999999999999999999988655432
Q ss_pred -ccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhh--hc------------------cccc--
Q 011349 208 -SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--RG------------------KNFL-- 263 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--~~------------------~~~~-- 263 (488)
...++..|+|||++.+. .++.++||||||+++|+|++|.+|+........ .. ....
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 34567889999999887 789999999999999999999987764311100 00 0000
Q ss_pred ccccc----ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 MLMDS----CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+. .....++...+.++.+++.+||..+|++|||+++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 00011222347889999999999999999999999865
No 302
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=8.1e-39 Score=301.67 Aligned_cols=245 Identities=16% Similarity=0.243 Sum_probs=200.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.+.+.||+|+||.||+|.. .+|..||+|.+..... ...+.+.+|+.+++.++|+||+++++.+......++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 35677889999999999994 4688899999875432 23457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCCCC----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~~---- 207 (488)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++ .++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 9999999987544456899999999999999999999999 99999999999999876 46999999987664432
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...+++.|+|||++.+..++.++||||||++++||++|..|+.......... ...... ........+..+.+++.
T Consensus 161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~i~ 235 (257)
T cd08225 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL----KICQGY-FAPISPNFSRDLRSLIS 235 (257)
T ss_pred ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHhccc-CCCCCCCCCHHHHHHHH
Confidence 2357889999999988889999999999999999999998876432211111 111111 11223345678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..+|++|||+.+++.+
T Consensus 236 ~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 236 QLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHhccChhhCcCHHHHhhC
Confidence 9999999999999999876
No 303
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.3e-39 Score=308.65 Aligned_cols=250 Identities=19% Similarity=0.216 Sum_probs=197.1
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 128 (488)
..+.+++.||.|+||.||+|... +++.||||.++...... ...+.+|+.++.+++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 45677888999999999999954 68899999997544222 33577899999999999999999998877 789999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~-~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 85 MEYVE-HDLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred ehhcC-cCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 99997 599888864 2346999999999999999999999999 999999999999999999999999998865443
Q ss_pred --CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc------------------------
Q 011349 207 --KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG------------------------ 259 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~------------------------ 259 (488)
....+++.|+|||.+.+. .++.++||||||+++|+|++|.+|+..........
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAK 241 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhc
Confidence 233467889999998764 46889999999999999999998875432110000
Q ss_pred -cccccccccccCCCCChh-hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 -KNFLMLMDSCLEGHFSND-DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 -~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..........+...++.. .++.+.+++.+||+.+|++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred ccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000011111223322 46778999999999999999999999875
No 304
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7e-39 Score=309.07 Aligned_cols=248 Identities=21% Similarity=0.197 Sum_probs=195.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-----ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-----DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+++.||.|+||.||+|.. .+++.||||.+...... ....+..|++++++++|+||+++++++.+.+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 45677889999999999995 46899999999765433 2345778999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||+ +++|.+++.... ..+++..+..++.||++||.|||+++ ++|+||||+||+++.++.++|+|||+++......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 999 899999996422 37999999999999999999999999 9999999999999999999999999998664432
Q ss_pred --ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------------cccccc
Q 011349 208 --SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------------FLMLMD 267 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------------~~~~~~ 267 (488)
...+++.|+|||.+.+ ..++.++|||||||++|||++|.+++............ ......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence 2345778999999865 45788999999999999999997665432210000000 000000
Q ss_pred cccCC-----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 SCLEG-----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 ~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..... ......+..+.+++.+||..+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000 1112346789999999999999999999999986
No 305
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=8e-39 Score=302.39 Aligned_cols=242 Identities=17% Similarity=0.160 Sum_probs=191.8
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHH-hhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAV-GLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+.||.|+||.||+|.. .+++.||||.+....... ...+..|..++ ...+|+|++++++++..++..++||||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4679999999999994 568899999987543221 22345555544 444899999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccccC
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 214 (488)
++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||+++.........++..
T Consensus 82 ~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 99999986 3456899999999999999999999999 99999999999999999999999999887665556678899
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|++||.+.+..++.++||||||+++|+|+||..|+................. .........+++.+.+++.+||..+|
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p 236 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI--NWPEEVKEFCSPEAVDLINRLLCMDP 236 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--CCCCcccccCCHHHHHHHHHHccCCH
Confidence 9999999888889999999999999999999988765422211110000000 01112223457889999999999999
Q ss_pred CCCCCHH---HHHHH
Q 011349 295 RERPNAK---SLVAS 306 (488)
Q Consensus 295 ~~Rps~~---~il~~ 306 (488)
++||++. +++.|
T Consensus 237 ~~R~~~~~~~~~l~~ 251 (260)
T cd05611 237 AKRLGANGYQEIKSH 251 (260)
T ss_pred HHccCCCcHHHHHcC
Confidence 9999665 55444
No 306
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=9e-39 Score=305.20 Aligned_cols=239 Identities=18% Similarity=0.186 Sum_probs=189.4
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhh---cCCCCCcccccceecCCeeeEEEecCCC
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGL---LRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~---l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
||+|+||.||++.. .+++.||||.+....... ...+.+|..+++. .+||||+.+++++..++..++||||++|
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG 81 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence 69999999999995 568999999987543221 2234455544444 3699999999999988999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cccccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~t 212 (488)
++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.++|+|||++...... ....++
T Consensus 82 ~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (279)
T cd05633 82 GDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (279)
T ss_pred CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence 99999886 3456999999999999999999999999 999999999999999999999999998754332 234678
Q ss_pred cCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
..|+|||.+.+ ..++.++|||||||++|+|++|..||......... ...... .......+...+.++.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMT-LTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHHHh-hcCCcCCccccCHHHHHHHHHHhc
Confidence 99999999864 56889999999999999999999988643211110 000000 011223344567889999999999
Q ss_pred CCCCCCC-----CHHHHHHH
Q 011349 292 YEPRERP-----NAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rp-----s~~~il~~ 306 (488)
.||.+|| |++++++|
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhC
Confidence 9999999 69999987
No 307
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=9.2e-39 Score=304.92 Aligned_cols=242 Identities=18% Similarity=0.226 Sum_probs=195.2
Q ss_pred CCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||+|+||+||++. ..+|+.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 5999999999998 45689999999865321 2244678899999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---CccccccC
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLA 214 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~ 214 (488)
.+++.......+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 99987544457999999999999999999999999 999999999999999999999999998765432 23456789
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|+|||.+.+..++.++|||||||++++|++|+.||......... ..+..... ......+...++.+.+++.+||+.+|
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p 237 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-EELKRRTL-EMAVEYPDKFSPEAKDLCEALLQKDP 237 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH-HHHHhccc-cccccCCccCCHHHHHHHHHHccCCh
Confidence 99999998888999999999999999999999887543211000 00000000 01122334457889999999999999
Q ss_pred CCCC-----CHHHHHHH
Q 011349 295 RERP-----NAKSLVAS 306 (488)
Q Consensus 295 ~~Rp-----s~~~il~~ 306 (488)
.+|| ++.+++.|
T Consensus 238 ~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 238 EKRLGCRGGSADEVREH 254 (277)
T ss_pred hHccCCCcccHHHHHhC
Confidence 9999 77777765
No 308
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.3e-39 Score=291.37 Aligned_cols=252 Identities=15% Similarity=0.212 Sum_probs=197.1
Q ss_pred cccccccCCCCCCceEEEEE-eCC----CcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceec-CCeee
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDE----DRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCE-GEERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~----~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~ 126 (488)
.|++++.||+|+||.||+|+ .++ ...+|||+|+.... .-.....+|+.+++.++||||+.+..+|.. +..++
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 46789999999999999996 222 23689999986532 235678999999999999999999999987 77899
Q ss_pred EEEecCCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC----CCCeeccCCC
Q 011349 127 LVAEFMPNETLSKHLFHW---ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD----GNPRLSCFGL 199 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfgl 199 (488)
+++||.+ -+|..+|+.. ....++...+..|++||+.|+.|||++- |+||||||+|||+..+ |.|||+|||+
T Consensus 105 l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 105 LLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred EEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeecccH
Confidence 9999998 6898888743 2357999999999999999999999999 9999999999999766 9999999999
Q ss_pred cccCCCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc--------cc
Q 011349 200 MKNSRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------FL 263 (488)
Q Consensus 200 a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------~~ 263 (488)
++...+. .....|..|.|||.+.| ..||++.|||+.|||+.||+|-.+.|.+.....-.... +.
T Consensus 183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf 262 (438)
T KOG0666|consen 183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF 262 (438)
T ss_pred HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence 9976542 34566899999999988 56999999999999999999999877654222111100 00
Q ss_pred cccc---------------------cccCCCCCh-----------hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 264 MLMD---------------------SCLEGHFSN-----------DDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 264 ~~~~---------------------~~~~~~~~~-----------~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+++. ......+.. .-++...+|+.++|..||-+|.|+++.+++.-
T Consensus 263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y 339 (438)
T KOG0666|consen 263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY 339 (438)
T ss_pred HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence 0000 000000000 01234789999999999999999999999854
No 309
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.6e-38 Score=305.34 Aligned_cols=240 Identities=20% Similarity=0.267 Sum_probs=196.8
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
..||+|+||.||++.. .+++.||||++..........+.+|+.+++.++|+||+++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 4579999999999985 578999999987554444567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----CccccccC
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNLA 214 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~ 214 (488)
+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....+++.
T Consensus 106 ~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06657 106 DIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 181 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence 9874 446899999999999999999999999 999999999999999999999999988655332 23457889
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|++||.+.+..++.++||||||+++|+|++|..|+.......... ........... .....+..+.+++.+||..+|
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPKLK--NLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhhCCcccC--CcccCCHHHHHHHHHHHhCCc
Confidence 999999988888999999999999999999998875432111100 00111111110 112346778999999999999
Q ss_pred CCCCCHHHHHHH
Q 011349 295 RERPNAKSLVAS 306 (488)
Q Consensus 295 ~~Rps~~~il~~ 306 (488)
.+||++.+++.+
T Consensus 259 ~~R~~~~~ll~~ 270 (292)
T cd06657 259 AQRATAAELLKH 270 (292)
T ss_pred ccCcCHHHHhcC
Confidence 999999999986
No 310
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.5e-38 Score=305.73 Aligned_cols=249 Identities=18% Similarity=0.197 Sum_probs=193.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.+++.||+|+||.||+|.. .++..||||++....... ...+.+|+.+++.++|+||+++++++..+...++||||+
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYM 85 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEecc
Confidence 457888999999999999984 568899999987554222 346789999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
. ++|.+.+.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..... ..
T Consensus 86 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 162 (291)
T cd07870 86 H-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSS 162 (291)
T ss_pred c-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCC
Confidence 6 677776643 2356888999999999999999999999 999999999999999999999999998754322 23
Q ss_pred cccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc------------------ccccccccc
Q 011349 209 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------------------NFLMLMDSC 269 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------------------~~~~~~~~~ 269 (488)
..+++.|+|||.+.+. .++.++|||||||++|||+||..||........... .........
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07870 163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW 242 (291)
T ss_pred ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchh
Confidence 3568899999998763 578899999999999999999988754321100000 000000000
Q ss_pred cCCCCC---------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 270 LEGHFS---------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 270 ~~~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+ ...+..+.+++.+|+..||.+|||+.+++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 243 FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred ccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000 0124678899999999999999999999875
No 311
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.1e-38 Score=303.42 Aligned_cols=248 Identities=20% Similarity=0.236 Sum_probs=195.7
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+++.||.|++|.||+|.. .+|..||||++...... ....+.+|+++++.++|||++++++++.+++..++||||++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~ 81 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD 81 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence 5677889999999999994 57999999998754322 23568899999999999999999999999999999999995
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
++|.+++.......+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ...
T Consensus 82 -~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 159 (283)
T cd07835 82 -LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE 159 (283)
T ss_pred -cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence 79999886433346999999999999999999999998 999999999999999999999999998754322 223
Q ss_pred ccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc--------------------cccccccc
Q 011349 210 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------------------NFLMLMDS 268 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------------------~~~~~~~~ 268 (488)
.++..|+|||++.+. .++.++||||||+++|+|++|+.||........... ........
T Consensus 160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07835 160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK 239 (283)
T ss_pred ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence 457889999988664 568899999999999999999988754321100000 00000000
Q ss_pred c---cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 C---LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ~---~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. .........+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 0011122345788999999999999999999999875
No 312
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.5e-38 Score=296.97 Aligned_cols=246 Identities=21% Similarity=0.243 Sum_probs=203.2
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
|.+.+.||+|++|.||++... ++..|++|++..........+.+|+.+++.++|+||+++++++......++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 456678899999999999964 6889999999876544567899999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Ccccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYST 211 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~ 211 (488)
++|.+++... ...+++..+..++.|++.||.+||+.+ ++|+||+|+||++++++.++|+|||.+...... ....+
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 159 (253)
T cd05122 82 GSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG 159 (253)
T ss_pred CcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccceec
Confidence 9999998642 257999999999999999999999998 999999999999999999999999998876554 35567
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
+..|++||.+.+..++.++||||||+++++|++|+.|+.................. ....+...+..+.+++.+||.
T Consensus 160 ~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~ 236 (253)
T cd05122 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPP---GLRNPEKWSDEFKDFLKKCLQ 236 (253)
T ss_pred CCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCC---CcCcccccCHHHHHHHHHHcc
Confidence 88999999998888999999999999999999999887544111110000000000 001111236789999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 011349 292 YEPRERPNAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~~il~~ 306 (488)
.||++|||+.+++.+
T Consensus 237 ~~p~~R~t~~~~l~~ 251 (253)
T cd05122 237 KNPEKRPTAEQLLKH 251 (253)
T ss_pred CChhhCCCHHHHhcC
Confidence 999999999999875
No 313
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.2e-38 Score=306.89 Aligned_cols=245 Identities=19% Similarity=0.212 Sum_probs=197.9
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..++.||+|+||.||+|.. .++..||||.+...... ....+.+|+++++.++|+|++++++++......++||||+
T Consensus 18 ~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 97 (308)
T cd06634 18 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC 97 (308)
T ss_pred HHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEcc
Confidence 4456789999999999994 46888999998643222 2346889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t 212 (488)
. |+|.+.+.. ....+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++..........++
T Consensus 98 ~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (308)
T cd06634 98 L-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGT 174 (308)
T ss_pred C-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccCC
Confidence 7 688777643 3456899999999999999999999999 999999999999999999999999999877666667788
Q ss_pred cCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 213 LAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 213 ~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+.|+|||.+. ...++.++|||||||++|+|++|..|+.......... ...............+..+.+++.+|
T Consensus 175 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~c 250 (308)
T cd06634 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNESPALQSGHWSEYFRNFVDSC 250 (308)
T ss_pred ccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH----HHhhcCCCCcCcccccHHHHHHHHHH
Confidence 9999999975 3567889999999999999999998875432111100 01111111111234567899999999
Q ss_pred ccCCCCCCCCHHHHHHHhc
Q 011349 290 LQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l~ 308 (488)
|..+|.+||++.+++.+..
T Consensus 251 l~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 251 LQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred hhCCcccCCCHHHHhhCcc
Confidence 9999999999999998844
No 314
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=305.49 Aligned_cols=256 Identities=19% Similarity=0.221 Sum_probs=209.6
Q ss_pred HHHHHh-cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccce
Q 011349 45 QLRAAT-SGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCC 119 (488)
Q Consensus 45 ~~~~~~-~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~ 119 (488)
|..-.| +.|..++++ |+|+||.||-+. ..+|+.+|.|++.+... .......+|-.+|.+++.+.||.+--.|
T Consensus 178 E~qpvt~n~F~~~Rvl---GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf 254 (591)
T KOG0986|consen 178 ELQPVTKNTFRVYRVL---GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF 254 (591)
T ss_pred HhhhccccceeeeEEE---ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee
Confidence 444444 346666665 999999999998 56799999999864432 2234578999999999999999999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
.+.+.+++|+..|.||+|.-+|.+..+..|++..+..++.+|+.||.+||+.+ ||+|||||+|||+|++|+++|+|.||
T Consensus 255 eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGL 333 (591)
T KOG0986|consen 255 ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGL 333 (591)
T ss_pred cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccce
Confidence 99999999999999999999998777778999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 200 MKNSRDGK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 200 a~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
|..+..+. ...||.+|||||++....|+.+.|.|||||+||||+.|+.||....... ..+.+...+- .....++.
T Consensus 334 Avei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv-k~eEvdrr~~-~~~~ey~~ 411 (591)
T KOG0986|consen 334 AVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV-KREEVDRRTL-EDPEEYSD 411 (591)
T ss_pred EEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh-hHHHHHHHHh-cchhhccc
Confidence 99877654 3478999999999999999999999999999999999999986542111 1111111100 01224566
Q ss_pred hhHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 011349 277 DDGTELVRLASRCLQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps-----~~~il~~ 306 (488)
..+++..+|....|.+||++|.. +.++.+|
T Consensus 412 kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 412 KFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred ccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 67889999999999999999964 4456555
No 315
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.9e-39 Score=311.13 Aligned_cols=248 Identities=19% Similarity=0.248 Sum_probs=212.5
Q ss_pred cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+.+.-|.+++.||+|.|++|.+|. ..++..||||.+.+..... .+.+.+|+++|..++|||||+++.+......+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 445567899999999999999999 4568999999998776443 3568999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+.+|.+++++. ..+++.+..+..++.|+..|++|||+++ |+|||||++||||+.+.++||+|||++......
T Consensus 133 V~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 133 VMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYGL 209 (596)
T ss_pred EEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeecccc
Confidence 999999999999998 4566777999999999999999999999 999999999999999999999999999876543
Q ss_pred --CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC--CChhhHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FSNDDGTE 281 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 281 (488)
.+++|++.|.|||++.+.++ ++.+|+||+|++||-|+.|..||.+....... ++.+.+. ++...+.+
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr--------~rvl~gk~rIp~~ms~d 281 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELR--------PRVLRGKYRIPFYMSCD 281 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccccc--------chheeeeecccceeech
Confidence 47899999999999999776 67999999999999999999998765333222 2222221 23345677
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
..+++.++|.++|.+|++++++.++-..
T Consensus 282 ce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 282 CEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred hHHHHHHhhccCccccCCHHHhhhhccc
Confidence 8999999999999999999999998543
No 316
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.4e-38 Score=309.48 Aligned_cols=246 Identities=18% Similarity=0.219 Sum_probs=191.1
Q ss_pred cCCCC--CCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEK--APNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||.| +||+||++.. .+|+.||||++...... ..+.+.+|+.+++.++||||++++++|..++..++||||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 34555 9999999995 57999999998754322 2357889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---------
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--------- 206 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--------- 206 (488)
+|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++++||+.+......
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD 163 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence 9999987544456899999999999999999999999 999999999999999999999999854322111
Q ss_pred --CccccccCCCCccccccC--CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc-------------------
Q 011349 207 --KSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL------------------- 263 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~--~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~------------------- 263 (488)
....++..|+|||++.+. .++.++|||||||++|||++|+.|+..............
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRM 243 (328)
T ss_pred ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhh
Confidence 011235679999999763 478899999999999999999988764321110000000
Q ss_pred ----------------------cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 264 ----------------------MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 264 ----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
...........+...+..+.+|+.+||..||++|||+.+++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~ 309 (328)
T cd08226 244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA 309 (328)
T ss_pred ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence 00000111122234567899999999999999999999999873
No 317
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-39 Score=287.20 Aligned_cols=249 Identities=17% Similarity=0.158 Sum_probs=200.5
Q ss_pred HhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec----C
Q 011349 49 ATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE----G 122 (488)
Q Consensus 49 ~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~ 122 (488)
.|.+|+-.. ++||-|-.|.|-.+. ..+|+.+|+|++. +.....+|+++--.. .|||||++++++.. .
T Consensus 59 itedY~is~--qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 59 ITEDYSISW--QVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred chhhheehh--hhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 444444332 568999999999998 5579999999985 345678899887777 59999999999864 3
Q ss_pred CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec---CCCCCeeccCCC
Q 011349 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGL 199 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgl 199 (488)
..+.+|||.|+||.|...|..+..+.+++.++..|+.||+.|+.|||+.+ |.||||||+|+|.. .+..+||+|||+
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEeccccc
Confidence 46789999999999999999877888999999999999999999999999 99999999999996 456789999999
Q ss_pred cccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC-
Q 011349 200 MKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS- 275 (488)
Q Consensus 200 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 275 (488)
|+..... .+.+-|+.|.|||++...+|+..+|+||+||++|-|++|-+||+..-...+..+-...+..... .||
T Consensus 211 AK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy--~FP~ 288 (400)
T KOG0604|consen 211 AKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQY--EFPE 288 (400)
T ss_pred ccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCc--cCCC
Confidence 9976533 3567799999999999999999999999999999999999998764221111111111111111 122
Q ss_pred ---hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 276 ---NDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 276 ---~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
..++....++|+.+|..+|.+|.|+.++++|-
T Consensus 289 pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 289 PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 24578889999999999999999999999873
No 318
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3.1e-38 Score=306.60 Aligned_cols=242 Identities=20% Similarity=0.236 Sum_probs=195.8
Q ss_pred ccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 58 IVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+++||+|+||.||+|.. .++..|++|++....... ...+.+|+++++.++|||++++++++.+....++||||+.
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 104 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL 104 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence 356689999999999994 568899999987543222 3468899999999999999999999999999999999996
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcccccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 213 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~ 213 (488)
++|.+++.. ...++++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++..........++.
T Consensus 105 -~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 181 (313)
T cd06633 105 -GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTP 181 (313)
T ss_pred -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccc
Confidence 677777753 3456999999999999999999999999 9999999999999999999999999987766556677889
Q ss_pred CCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 214 AFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 214 ~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
.|+|||++. ...++.++|||||||++|+|++|..|+............ .............+..+.+++.+||
T Consensus 182 ~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l 257 (313)
T cd06633 182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNDSPTLQSNEWTDSFRGFVDYCL 257 (313)
T ss_pred cccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH----HhcCCCCCCccccCHHHHHHHHHHc
Confidence 999999984 356888999999999999999999887553211110000 0000111112234567999999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 011349 291 QYEPRERPNAKSLVAS 306 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~ 306 (488)
+.+|.+||++.+++.+
T Consensus 258 ~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 258 QKIPQERPASAELLRH 273 (313)
T ss_pred cCChhhCcCHHHHhcC
Confidence 9999999999999976
No 319
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.8e-38 Score=299.37 Aligned_cols=243 Identities=19% Similarity=0.221 Sum_probs=197.8
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC-----CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA-----WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
+.+.+.||+|+||.||+|. ..++..||+|.+.... ......+.+|+.++++++|+||+++++++.+. ...++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence 4677888999999999999 4568999999875321 12234788999999999999999999988664 46889
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+++++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 84 v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 84 FVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 999999999999986 3456899999999999999999999999 999999999999999999999999998764321
Q ss_pred ------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 ------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....++..|+|||.+.+..++.++|||||||++++|++|+.||....... ..............+...++
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~p~~~~~ 236 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA----AIFKIATQPTKPMLPDGVSD 236 (264)
T ss_pred ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH----HHHHHHcCCCCCCCCcccCH
Confidence 13457889999999998889999999999999999999998875431111 11112222223345566778
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+++.+||. +|..||++.+++.|
T Consensus 237 ~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 237 ACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HHHHHHHHHhc-CcccCccHHHHhcC
Confidence 89999999998 57999999999876
No 320
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8e-39 Score=328.55 Aligned_cols=251 Identities=17% Similarity=0.204 Sum_probs=184.7
Q ss_pred CcccccccCCCCCCceEEEEEeCC--CcEEEEEEcc--------------C---CCCCChHHHHHHHHHHhhcCCCCCcc
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE--DRWIAVKRFN--------------R---SAWPDSRQFLEEARAVGLLRSERLVN 114 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~--------------~---~~~~~~~~~~~E~~~l~~l~h~niv~ 114 (488)
..|.++++||+|+||.||++..+. +..+++|.+. . ........+.+|+.+|++++|||||+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 457899999999999999987432 2222222111 0 01112346889999999999999999
Q ss_pred cccceecCCeeeEEEecCCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 115 LIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 115 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
+++++...+..|+|++++. ++|.+++.... .......++..|+.||+.||.|||+++ ||||||||+|||++.++.
T Consensus 228 l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 228 IEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCDGK 305 (501)
T ss_pred EeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCC
Confidence 9999999999999999995 67777764311 122345678889999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC-----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh-----hhhc--
Q 011349 192 PRLSCFGLMKNSRDGK-----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-----LIRG-- 259 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~-----~~~~-- 259 (488)
+||+|||+++...... ...||+.|+|||++.+..++.++|||||||++|||++|..+|...... ....
T Consensus 306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~ 385 (501)
T PHA03210 306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIID 385 (501)
T ss_pred EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHH
Confidence 9999999998654322 356899999999999999999999999999999999998655432110 0000
Q ss_pred ------ccc-------ccccccc----cCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 ------KNF-------LMLMDSC----LEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 ------~~~-------~~~~~~~----~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+ ...+... ....+ ....+..+.+++.+||..||.+|||+.+++.+
T Consensus 386 ~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 386 SLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred hcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000 0000000 00000 01134567888999999999999999999987
No 321
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.7e-38 Score=296.49 Aligned_cols=243 Identities=21% Similarity=0.308 Sum_probs=203.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.+.+.||+|++|.||++.. .+++.|+||.+..... .....+.+|++++++++|+|++++++++......++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 45678899999999999985 4688899999987654 23467999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (254)
T cd06627 82 ENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS 158 (254)
T ss_pred CCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence 99999999863 367999999999999999999999999 9999999999999999999999999998765433 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..++..|+|||...+..++.++||||||+++++|++|..|+......... .... .......+...+..+.+++.+
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~i~~ 233 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL----FRIV-QDDHPPLPEGISPELKDFLMQ 233 (254)
T ss_pred cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH----HHHh-ccCCCCCCCCCCHHHHHHHHH
Confidence 45788999999998877899999999999999999999887543211100 0000 111223444567889999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..+|++|||+.+++.+
T Consensus 234 ~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 234 CFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHhCChhhCcCHHHHhcC
Confidence 999999999999999864
No 322
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3e-38 Score=303.90 Aligned_cols=251 Identities=12% Similarity=0.043 Sum_probs=184.5
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCCCh-----------HHHHHHHHHHhhcCCCCCcccccc
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWPDS-----------RQFLEEARAVGLLRSERLVNLIGC 118 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~~ 118 (488)
..+.+.+.||+|+||.||+|...+ +..+|+|+......... .....+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 357888999999999999999543 45567776543321110 112234445666789999999997
Q ss_pred eecCC----eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCee
Q 011349 119 CCEGE----ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194 (488)
Q Consensus 119 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 194 (488)
+.... ..++++|++. .++.+.+.. ....++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEE
Confidence 76543 3478888874 577766642 234688899999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC-----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhh-hhcccc
Q 011349 195 SCFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRGKNF 262 (488)
Q Consensus 195 ~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~-~~~~~~ 262 (488)
+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 999998754311 22468999999999999999999999999999999999998886542110 000000
Q ss_pred ccccccccCC-CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 263 LMLMDSCLEG-HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 263 ~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
...+.....+ .....+++.+.+++..||..+|++||++.++++.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 248 CDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 0011111111 112244688999999999999999999999998763
No 323
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4e-38 Score=301.21 Aligned_cols=247 Identities=21% Similarity=0.244 Sum_probs=192.1
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcC-CCCCcccccceecC--CeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLR-SERLVNLIGCCCEG--EERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e 130 (488)
|.++++||+|+||.||+|. ..+++.||+|+++.... .......+|+.++.++. |+||+++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 3567889999999999999 45688999999875432 22334567999999995 99999999999887 88999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---C
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---K 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 207 (488)
|++ ++|.+.+.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++. +.+||+|||+++..... .
T Consensus 81 ~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMD-MNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCC-ccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 997 588887754 2356899999999999999999999999 999999999999999 99999999999865433 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh-h------ccccc---cc------ccccc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-R------GKNFL---ML------MDSCL 270 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~-~------~~~~~---~~------~~~~~ 270 (488)
...++..|+|||.+.+ +.++.++|||||||++|||++|..|++....... . ..... .. .....
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 3456889999997654 5578899999999999999999988865321110 0 00000 00 00000
Q ss_pred CC-------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 271 EG-------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 271 ~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ......+..+.+++.+||..+|++||++.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 0112346889999999999999999999999876
No 324
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.1e-38 Score=304.67 Aligned_cols=253 Identities=19% Similarity=0.213 Sum_probs=195.7
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecC--Ceee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEG--EERL 126 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 126 (488)
+.+.+++++.||.|+||.||+|.. .+|+.||+|++....... ...+.+|+.++++++|+||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 345678888999999999999995 568999999987543222 23567899999999999999999998654 4689
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+. ++|.+++.. ....+++.++..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 85 lv~e~~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCE-QDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999997 588888764 2356999999999999999999999999 999999999999999999999999998866533
Q ss_pred C----ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------ccccccc-------
Q 011349 207 K----SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------NFLMLMD------- 267 (488)
Q Consensus 207 ~----~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-------~~~~~~~------- 267 (488)
. ...++..|+|||.+.+ ..++.++|||||||++|||++|.+|+........... .......
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07845 162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL 241 (309)
T ss_pred cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence 1 2234678999999876 4578999999999999999999988764322111000 0000000
Q ss_pred --cc-cC-CCC------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 268 --SC-LE-GHF------SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 268 --~~-~~-~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.. .. ... ....++.+.++|.+||..||++|||+.+++.|-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~ 291 (309)
T cd07845 242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS 291 (309)
T ss_pred cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 00 00 000 011357788999999999999999999999873
No 325
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.1e-38 Score=308.26 Aligned_cols=248 Identities=17% Similarity=0.254 Sum_probs=195.5
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC-----Ceee
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 126 (488)
.|.+++.||+|+||.||+|. ..+++.||||.+.... ......+.+|+.+++.++|+||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 35678889999999999999 4578999999987532 22345678899999999999999999988654 3479
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 86 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 86 IVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 9999996 78988886 4467999999999999999999999999 999999999999999999999999999866443
Q ss_pred ----CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhh----------------h---hcccc
Q 011349 207 ----KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL----------------I---RGKNF 262 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~----------------~---~~~~~ 262 (488)
....++..|+|||.+.+ ..++.++|||||||++|+|++|++||....... . .....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 23456889999998865 468899999999999999999998875432100 0 00000
Q ss_pred cccc---ccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLM---DSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~---~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+ ..... .......++++.+++.+||..+|++|||+.+++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000 00000 00112356788999999999999999999999998
No 326
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.6e-38 Score=310.00 Aligned_cols=246 Identities=15% Similarity=0.216 Sum_probs=194.0
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC------Cee
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~ 125 (488)
.|.+++.||+|+||.||+|. ..+++.||||++.... ......+.+|+.++++++||||+++++++... ...
T Consensus 17 ~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 96 (353)
T cd07850 17 RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDV 96 (353)
T ss_pred ceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcE
Confidence 45778889999999999999 4578999999986432 22345678899999999999999999987643 357
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||+. ++|.+.+.. .++...+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 97 YLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred EEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 99999996 688887742 2899999999999999999999999 99999999999999999999999999986544
Q ss_pred CC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----------------------
Q 011349 206 GK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG----------------------- 259 (488)
Q Consensus 206 ~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~----------------------- 259 (488)
.. ...++..|+|||.+.+..++.++|||||||++|+|++|+.||..........
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
T cd07850 171 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRN 250 (353)
T ss_pred CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhH
Confidence 32 3456889999999999999999999999999999999998876432100000
Q ss_pred ----------cccccccccccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 ----------KNFLMLMDSCLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 ----------~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+......... ...+...+..+.+++.+||+.||++|||+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 251 YVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000000 00122346678999999999999999999999987
No 327
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.4e-38 Score=302.93 Aligned_cols=251 Identities=19% Similarity=0.178 Sum_probs=194.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
..+.+.+.||.|++|.||+|.. .+++.||||.+..... ...+.+.+|++++++++||||+++++++..+...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 3567888999999999999995 4688999999865432 223568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCcccCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~--- 206 (488)
|++ ++|.+++.......+++..+..++.||+.||.|||+++ ++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 996 68888876434445788899999999999999999999 999999999999985 567899999999754322
Q ss_pred -CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------ccccccc----------
Q 011349 207 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------NFLMLMD---------- 267 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-------~~~~~~~---------- 267 (488)
....+++.|+|||.+.+ ..++.++|||||||++|+|+||.+|+........... .....+.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 23356789999999876 4578899999999999999999988754321100000 0000000
Q ss_pred --cccCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 --SCLEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 --~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.... ......+..+.+++.+||+.+|++||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0112345778999999999999999999999986
No 328
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=7.6e-38 Score=298.67 Aligned_cols=239 Identities=19% Similarity=0.192 Sum_probs=189.1
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHH---HHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEAR---AVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
||+|+||.||+|.. .+++.||||.+....... ...+..|.. .++...||||+++++++...+..++||||++|
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g 81 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 81 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence 69999999999984 568899999987543221 122444443 34445799999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cccccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~t 212 (488)
++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....|+
T Consensus 82 ~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (278)
T cd05606 82 GDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (278)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence 99999886 4457999999999999999999999999 999999999999999999999999998754332 245688
Q ss_pred cCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
..|+|||.+.++ .++.++|||||||++|||++|+.||......... ...... .......+...+..+.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~--~~~~~~-~~~~~~~~~~~s~~~~~li~~~l~ 235 (278)
T cd05606 159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMT-LTMAVELPDSFSPELRSLLEGLLQ 235 (278)
T ss_pred cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH--HHHHHh-hccCCCCCCcCCHHHHHHHHHHhh
Confidence 999999999754 6899999999999999999999887643111000 000000 011223344457889999999999
Q ss_pred CCCCCCC-----CHHHHHHH
Q 011349 292 YEPRERP-----NAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rp-----s~~~il~~ 306 (488)
.+|.+|| ++.+++++
T Consensus 236 ~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 236 RDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred cCHHhccCCCCCCHHHHHhC
Confidence 9999999 99999876
No 329
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5.7e-38 Score=295.78 Aligned_cols=245 Identities=20% Similarity=0.244 Sum_probs=203.2
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 130 (488)
+.+.+.||+|++|.||+|... +++.|++|++..... ...+.+.+|+.++++++|+||+++++.+... ...++|||
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 345677899999999999955 688999999876543 2356789999999999999999999999888 88999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 158 (260)
T cd06606 82 YVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE 158 (260)
T ss_pred ecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence 9999999999874 337999999999999999999999999 9999999999999999999999999988665432
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...++..|++||.+.+...+.++||||||+++++|++|..|+........ ..............+...+..+.+
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T cd06606 159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA---ALYKIGSSGEPPEIPEHLSEEAKD 235 (260)
T ss_pred cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHhccccCCCcCCCcccCHHHHH
Confidence 34568899999999888899999999999999999999988765431110 001111111222344455788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||..+|.+||++.+++.+
T Consensus 236 ~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 236 FLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHHhCcCChhhCCCHHHHhhC
Confidence 9999999999999999999876
No 330
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=7.2e-38 Score=295.00 Aligned_cols=245 Identities=20% Similarity=0.246 Sum_probs=205.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+.+.||.|+||.||++.. .++..|++|++..... .....+.+|+++++.++|+|++++++.+..+...++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 46778889999999999995 4688999999976543 34567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 133 PNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 9999999987532 467999999999999999999999998 9999999999999999999999999987654432
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+++.|+|||.+.+..++.++||||||+++++|++|..|+............. .......+...+..+.+++
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i 235 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKIL-----KGQYPPIPSQYSSELRNLV 235 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHh-----cCCCCCCCCCCCHHHHHHH
Confidence 3457889999999988889999999999999999999998875542221111111 1112233445678899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||..+|++|||+.+++.+
T Consensus 236 ~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 236 SSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHcCCChhhCcCHHHHhcC
Confidence 99999999999999999875
No 331
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.4e-38 Score=298.56 Aligned_cols=236 Identities=22% Similarity=0.252 Sum_probs=192.6
Q ss_pred CCCCCCceEEEEEeC-CCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||.|+||.||++... +|+.|++|.+..... ...+.+.+|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999965 499999999976543 2345789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----------
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----------- 206 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----------- 206 (488)
.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999874 347999999999999999999999999 999999999999999999999999998754332
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh--hHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND--DGTELV 283 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 283 (488)
....++..|++||.+.+...+.++||||||+++|++++|..|+........... ...... ..+.. .+..+.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~ 231 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQN----ILNGKI--EWPEDVEVSDEAI 231 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HhcCCc--CCCccccCCHHHH
Confidence 123567889999999888899999999999999999999988754422211111 110011 11222 368899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||+.+|.+|||+..+.+.
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~ 254 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEI 254 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHH
Confidence 99999999999999999444433
No 332
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5.8e-38 Score=295.56 Aligned_cols=245 Identities=18% Similarity=0.242 Sum_probs=203.4
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.+.+.||.|+||.||++. ..++..+|||.+...... ....+.+|+++++.++|+||+++++++......++||||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 4677889999999999998 456889999998764322 2456889999999999999999999999999999999999
Q ss_pred CCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cc
Q 011349 133 PNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 208 (488)
++++|.+++.+. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 999999988642 2356899999999999999999999999 999999999999999999999999998766443 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+++.|++||.+.+..++.++|+||||+++|+|++|+.|+.......... .+........+...+.++.+++.+
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRY-----KVQRGKYPPIPPIYSQDLQNFIRS 235 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHhcCCCCCCchhhCHHHHHHHHH
Confidence 456889999999998889999999999999999999998876543221111 111112223344567889999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..+|++||++.+++.+
T Consensus 236 ~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 236 MLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HcCCCcccCCCHHHHhcC
Confidence 999999999999999876
No 333
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.6e-38 Score=310.26 Aligned_cols=247 Identities=16% Similarity=0.230 Sum_probs=192.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecC-----CeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 127 (488)
.|.+++.||+|+||.||+|. ..+|+.||||+++.... .....+.+|+.++++++|+||+++++++... ...++
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEE
Confidence 45788889999999999998 45789999999874322 2345688899999999999999999986543 35799
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
|+||+. ++|.+.+. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 86 v~e~~~-~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 86 VQELME-TDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred Eehhcc-cCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 999996 68888773 457999999999999999999999999 9999999999999999999999999987654321
Q ss_pred -------ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh--------h---ccccccccc-
Q 011349 208 -------SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--------R---GKNFLMLMD- 267 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--------~---~~~~~~~~~- 267 (488)
...+|..|+|||.+.+ ..++.++|||||||++|+|++|+.||........ . ......+..
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence 2356889999998754 5688999999999999999999988754321100 0 000000000
Q ss_pred ----------cccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 ----------SCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 ----------~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... ..+..+.++.+++.+||+.+|++|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 011235678999999999999999999999998
No 334
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=6.1e-38 Score=305.07 Aligned_cols=249 Identities=17% Similarity=0.221 Sum_probs=193.2
Q ss_pred ccccccCCCCCCceEEEEEeC---CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD---EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
|.+++.||+|+||.||+|... ++..||||.+.... ....+.+.+|+.++.+++||||+++++++... ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 467788999999999999953 57899999998643 23346788999999999999999999999887 78999
Q ss_pred EEecCCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC----CCCCeeccCCCc
Q 011349 128 VAEFMPNETLSKHLFHW---ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ----DGNPRLSCFGLM 200 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla 200 (488)
||||++ ++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||++
T Consensus 82 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 82 LFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 999997 5677666421 2247899999999999999999999999 999999999999999 999999999998
Q ss_pred ccCCCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh--------------
Q 011349 201 KNSRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------------- 258 (488)
Q Consensus 201 ~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------------- 258 (488)
...... ....++..|+|||.+.+ ..++.++|||||||++++|++|.+|+.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 865332 23356788999998876 45789999999999999999999887543221100
Q ss_pred ---------------ccccccccccccCCCCC---------h--hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 259 ---------------GKNFLMLMDSCLEGHFS---------N--DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 259 ---------------~~~~~~~~~~~~~~~~~---------~--~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........+......++ . ..+..+.+++.+||+.||++|||+.+++.+
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00000000000001111 0 234578999999999999999999999876
No 335
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.2e-38 Score=301.06 Aligned_cols=248 Identities=23% Similarity=0.262 Sum_probs=195.5
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 130 (488)
|.+++.||.|+||.||+|... +++.||||++.... ......+.+|+.+++.++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 356788999999999999954 58899999998663 22345788999999999999999999999887 78999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++ ++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~-~~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMD-HDLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred ccc-ccHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 997 589888864 2257999999999999999999999999 9999999999999999999999999988665432
Q ss_pred --ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------ccccc--------
Q 011349 208 --SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFLML-------- 265 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~~~~~-------- 265 (488)
...++..|+|||.+.+ ..++.++||||||+++|||+||+.|+........... .+...
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 2345778999998765 4578999999999999999999988754322111000 00000
Q ss_pred ------cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 ------MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........+...++..+.+++.+||..+|.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000001111136788999999999999999999999875
No 336
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=9.1e-38 Score=303.64 Aligned_cols=244 Identities=20% Similarity=0.217 Sum_probs=188.1
Q ss_pred CCCCCCceEEEEEeCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhh
Q 011349 62 HGEKAPNVVYKGLVDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139 (488)
Q Consensus 62 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 139 (488)
+|.|+++.||++.. +++.||||+++... ....+.+.+|+.+++.++|+||+++++++...+..+++|||+++++|.+
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 34444444444433 78999999997652 2335679999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----------Cc
Q 011349 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----------KS 208 (488)
Q Consensus 140 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----------~~ 208 (488)
++.......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||.+...... ..
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~ 167 (314)
T cd08216 89 LLKTHFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKS 167 (314)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeecccccccccccccccc
Confidence 997544556899999999999999999999999 999999999999999999999999988644321 12
Q ss_pred cccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc----cccccc---------------
Q 011349 209 YSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN----FLMLMD--------------- 267 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~----~~~~~~--------------- 267 (488)
..++..|+|||.+.+ ..++.++|||||||++|||++|..||............ ....+.
T Consensus 168 ~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
T cd08216 168 SVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSR 247 (314)
T ss_pred ccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccc
Confidence 345678999999876 35788999999999999999999987643211100000 000000
Q ss_pred ---------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 268 ---------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 268 ---------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
...........+.++.+++.+||..||++|||+.+++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 248 SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 0001112223456789999999999999999999999973
No 337
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-39 Score=327.92 Aligned_cols=253 Identities=20% Similarity=0.191 Sum_probs=209.0
Q ss_pred HHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccC---CCCCChHHHHHHHHHHhhcCCCCCcccccceecC
Q 011349 47 RAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNR---SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG 122 (488)
Q Consensus 47 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 122 (488)
....-+-+++.|++.||+|+||.|..++ ..+++.||+|++++ ....+..-|..|-.+|..-+.+-|++++-.|.++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 3333344556899999999999999999 45689999999986 3334566799999999999999999999999999
Q ss_pred CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
.++|+||||++||+|-.++.+. .++|+..+..++..|+-||.-||+.| +|||||||+|||||..|++||+|||.+-.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred cceEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhHHh
Confidence 9999999999999999999743 37999999999999999999999999 99999999999999999999999998876
Q ss_pred CCCC-----CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC
Q 011349 203 SRDG-----KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 203 ~~~~-----~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
+... ...+|||.|++||+++. +.|++.+|.||+||++|||+.|..||+....-..-+. +++..-.-
T Consensus 225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~K----Im~hk~~l 300 (1317)
T KOG0612|consen 225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGK----IMNHKESL 300 (1317)
T ss_pred cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHH----Hhchhhhc
Confidence 6533 25689999999999863 5689999999999999999999999987643322222 22221111
Q ss_pred CCC--hhhHHHHHHHHHHhccCCCCCCCC---HHHHHHHh
Q 011349 273 HFS--NDDGTELVRLASRCLQYEPRERPN---AKSLVASL 307 (488)
Q Consensus 273 ~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~l 307 (488)
.+| ..++.+..+||.+.+ .+|+.|.. ++++-.|.
T Consensus 301 ~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 301 SFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred CCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCc
Confidence 233 347889999999988 47888987 99999884
No 338
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.7e-38 Score=302.83 Aligned_cols=249 Identities=18% Similarity=0.197 Sum_probs=192.2
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcC-CCCCcccccceecCCe-----ee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEE-----RL 126 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~-----~~ 126 (488)
+.+.+.||+|+||.||+|.. .+++.||||.+..... .....+.+|+.+++.++ ||||+++++++...+. .+
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence 46778889999999999995 4689999999875432 22457889999999995 6999999999877665 89
Q ss_pred EEEecCCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCccc
Q 011349 127 LVAEFMPNETLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKN 202 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~ 202 (488)
+||||+++ +|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||+++.
T Consensus 83 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 83 LVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeeccccee
Confidence 99999984 8888875422 346899999999999999999999999 999999999999998 88999999999875
Q ss_pred CCCC----CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------ccccc-
Q 011349 203 SRDG----KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFLML- 265 (488)
Q Consensus 203 ~~~~----~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~~~~~- 265 (488)
.... ....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||........... .+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 4322 22345788999998865 4578999999999999999999988765321110000 00000
Q ss_pred --c-----cc---ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 --M-----DS---CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 --~-----~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. .. ..........+.++.++|.+||..+|.+||++.+++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00 00000112356779999999999999999999999876
No 339
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.9e-39 Score=313.29 Aligned_cols=239 Identities=17% Similarity=0.220 Sum_probs=194.2
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCC----CCCChHHHHHHHHHHhhcCCCCCcccccceecCCe--eeEEEecCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRS----AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE--RLLVAEFMP 133 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~~ 133 (488)
.||+|+|-+||+|.. .+|-.||.--++.. .....+.|..|+.+|+.|+|||||+++.+|.+..+ +.+|+|++.
T Consensus 47 vLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~T 126 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFT 126 (632)
T ss_pred hcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeeccc
Confidence 469999999999994 45777774433322 12335789999999999999999999999987655 889999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeec-CCCCCeeccCCCcccCCCC--Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG--KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~--~~~ 209 (488)
.|+|..+++ +.+.++...+..|++||++||.|||++. ||||||||-+||+|+ ..|.|||+|.|||...... .+.
T Consensus 127 SGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksv 204 (632)
T KOG0584|consen 127 SGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSV 204 (632)
T ss_pred CCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccccee
Confidence 999999998 4566899999999999999999999985 699999999999997 5689999999999876543 456
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.|||.|||||+.. ..|+...||||||++++||+|+..|+........- ...+.....+..+.....++++++|.+|
T Consensus 205 IGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQI---YKKV~SGiKP~sl~kV~dPevr~fIekC 280 (632)
T KOG0584|consen 205 IGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQI---YKKVTSGIKPAALSKVKDPEVREFIEKC 280 (632)
T ss_pred ccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHH---HHHHHcCCCHHHhhccCCHHHHHHHHHH
Confidence 8999999999997 78999999999999999999999987665332211 1222222222223333357899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|.. .++|||+.++|.+
T Consensus 281 l~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 281 LAT-KSERLSAKELLKD 296 (632)
T ss_pred hcC-chhccCHHHHhhC
Confidence 999 9999999999987
No 340
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=7e-38 Score=306.98 Aligned_cols=248 Identities=17% Similarity=0.264 Sum_probs=194.5
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 128 (488)
+.+.+.||.|+||.||+|. ..+|..||+|++.... ......+.+|+.+|++++||||+++++++.. ....++|
T Consensus 7 y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 86 (334)
T cd07855 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVV 86 (334)
T ss_pred eeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEE
Confidence 4567788999999999999 4569999999987543 2234568889999999999999999998753 3468999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 87 ~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 87 MDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred Eehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 99996 68998886 3456999999999999999999999999 999999999999999999999999998765322
Q ss_pred ------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh-------hcc------------
Q 011349 207 ------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-------RGK------------ 260 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~-------~~~------------ 260 (488)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .+.
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 242 (334)
T cd07855 163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSD 242 (334)
T ss_pred CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchh
Confidence 12357889999999865 5688999999999999999999998865321100 000
Q ss_pred ccccccccc-cCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 261 NFLMLMDSC-LEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 261 ~~~~~~~~~-~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
......... .... .....+.++.+++.+||+.+|.+|||+.+++.+-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 243 RVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 000000000 0000 1123467899999999999999999999999873
No 341
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.9e-37 Score=344.80 Aligned_cols=245 Identities=23% Similarity=0.373 Sum_probs=196.5
Q ss_pred cccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 59 VSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
...||+|+||.||+|.. .++..||||++..... ....|++.+++++|||||+++++|.+.+..++||||+++|+|
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L 770 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNL 770 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcH
Confidence 34569999999999995 5789999999875432 223568899999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccccC
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCS---SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 214 (488)
.+++. .++|.++..|+.||+.||+||| +.+ |+||||||+||+++.++..++. ||............+|+.
T Consensus 771 ~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~ 843 (968)
T PLN00113 771 SEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSA 843 (968)
T ss_pred HHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCCcccccc
Confidence 99994 2899999999999999999999 456 9999999999999998888875 776655444445577899
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh----------hhhccccccccccccCC--CCChhhHHHH
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD----------LIRGKNFLMLMDSCLEG--HFSNDDGTEL 282 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~----------~~~~~~~~~~~~~~~~~--~~~~~~~~~l 282 (488)
|+|||++.+..++.++|||||||++|||+||+.|+...... ..........+++.... ..+.....++
T Consensus 844 y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (968)
T PLN00113 844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEV 923 (968)
T ss_pred ccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHH
Confidence 99999999999999999999999999999999987432110 00111122223333322 2233455678
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.+++.+||+.+|++||||.++++.|+.+.+..
T Consensus 924 ~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 924 MNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 89999999999999999999999999886643
No 342
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.3e-38 Score=300.74 Aligned_cols=249 Identities=19% Similarity=0.240 Sum_probs=195.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.++++||.|++|.||+|.. .+|..||||+++..... ....+.+|+.++++++|+||+++++++...+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 46778899999999999995 46889999999765432 34567889999999999999999999999999999999998
Q ss_pred CCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 134 NETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 134 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.++|+|||++...... ..
T Consensus 82 -~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 82 -KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred -ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 58888875422 346899999999999999999999999 999999999999999999999999998754322 23
Q ss_pred cccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-----------------cccccccc
Q 011349 209 YSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-----------------LMLMDSCL 270 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-----------------~~~~~~~~ 270 (488)
..++..|++||.+.+ ..++.++|||||||++|+|++|+.|+............. ........
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 456788999999866 456889999999999999999998875432211000000 00000000
Q ss_pred C------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 271 E------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 271 ~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. ....+..+..+.+++.+||+.||.+||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 00112345778999999999999999999999865
No 343
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2e-37 Score=296.59 Aligned_cols=248 Identities=17% Similarity=0.269 Sum_probs=195.3
Q ss_pred cccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCC
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.||.|++|+||+|... +++.|+||++..... .......+|+..+.+++ |+||+++++++..++..++||||+
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 80 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM- 80 (283)
T ss_pred eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-
Confidence 56778999999999999954 588899999875432 22334567999999998 999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Cccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 210 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 210 (488)
+|+|.+++.......+++.++..++.|++.+|.|||+++ ++|+||+|+||++++++.++|+|||++...... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYV 159 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCC
Confidence 789999887544457899999999999999999999999 999999999999999999999999999866543 2345
Q ss_pred cccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc---------------------ccccccccc
Q 011349 211 TNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG---------------------KNFLMLMDS 268 (488)
Q Consensus 211 ~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~---------------------~~~~~~~~~ 268 (488)
++..|+|||.+.+ ..++.++||||||++++||++|++|++......... ......+..
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07830 160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ 239 (283)
T ss_pred CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccc
Confidence 6889999998854 557899999999999999999998875442111000 000000000
Q ss_pred ccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 CLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... .......+..+.+++.+||+.+|++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 240 FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000 00111225779999999999999999999999875
No 344
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6.7e-38 Score=299.19 Aligned_cols=243 Identities=21% Similarity=0.249 Sum_probs=201.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 129 (488)
.|.+.+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.++++++ ||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 457788899999999999994 4799999999876432 22356889999999998 999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
|++++++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~--~~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIR--KYGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999999999997 3457999999999999999999999999 9999999999999999999999999987544322
Q ss_pred ----------------------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccc
Q 011349 208 ----------------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML 265 (488)
Q Consensus 208 ----------------------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 265 (488)
...++..|+|||.+.+..++.++||||||++++++++|..|+........ +...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~ 234 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT----FQKI 234 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH----HHHH
Confidence 22457889999999888899999999999999999999988764421111 1111
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCH----HHHHHH
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA----KSLVAS 306 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----~~il~~ 306 (488)
. .....++...++.+.+++.+||+.+|.+||++ ++++.|
T Consensus 235 ~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 235 L--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred H--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1 11123344557889999999999999999999 888765
No 345
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=8.3e-38 Score=306.09 Aligned_cols=247 Identities=20% Similarity=0.287 Sum_probs=198.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCC-----eeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE-----ERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~l 127 (488)
|.+.+.||.|+||.||+|.. .++..||||++.... ....+.+.+|+.+++.++|+||+++++++.... ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 46778899999999999995 458999999987643 234567999999999999999999999988765 7899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 82 v~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 82 VTELME-TDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred Eecchh-hhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 999997 68988886 3457999999999999999999999999 9999999999999999999999999988665432
Q ss_pred -------ccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------------------
Q 011349 208 -------SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------------------- 260 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------------------- 260 (488)
...++..|+|||.+.+. .++.++||||||+++|+|++|.+||...........
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 237 (330)
T cd07834 158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE 237 (330)
T ss_pred cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence 34568889999999887 789999999999999999999988865422110000
Q ss_pred ccccccc---ccc---CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 NFLMLMD---SCL---EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 ~~~~~~~---~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+. ... ........+..+.+++.+||+.+|.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000000 000 000112246789999999999999999999999987
No 346
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=8.3e-38 Score=299.12 Aligned_cols=248 Identities=21% Similarity=0.270 Sum_probs=198.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+++.||.|++|.||+|.. .+++.+++|.+...... ....+.+|+.++++++|+||+++++++..+...++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 35677899999999999994 47889999998765432 3467889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
+ ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||.+....... .
T Consensus 81 ~-~~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 D-TDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred C-CCHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 7 588888764 2357999999999999999999999999 9999999999999999999999999987665432 3
Q ss_pred cccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----------cccccccc---------
Q 011349 209 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----------KNFLMLMD--------- 267 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-----------~~~~~~~~--------- 267 (488)
..++..|+|||.+.+. .++.++||||||+++|+|+||+.||+......... ..+.....
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 4567889999999876 78999999999999999999998875432111000 00000000
Q ss_pred -c---ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 -S---CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 -~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. ..........+.++.+++.+||..||.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 00001122356789999999999999999999999875
No 347
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.9e-37 Score=295.98 Aligned_cols=248 Identities=21% Similarity=0.231 Sum_probs=193.8
Q ss_pred cccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC--hHHHHHHHHHHhhc---CCCCCcccccceecCCe-----e
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD--SRQFLEEARAVGLL---RSERLVNLIGCCCEGEE-----R 125 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~-----~ 125 (488)
.+++.||+|+||.||+|... +++.||||+++...... ...+.+|+.+++++ +|+||+++++++...+. .
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 81 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL 81 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence 56778899999999999965 48999999997543222 34567788877766 59999999999987776 9
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
+++|||+. ++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 82 TLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYSF 159 (287)
T ss_pred EEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence 99999997 58988886544446999999999999999999999999 99999999999999999999999999877643
Q ss_pred CC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc------------------c
Q 011349 206 GK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL------------------M 264 (488)
Q Consensus 206 ~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~------------------~ 264 (488)
.. ...++..|+|||.+.+..++.++|||||||++|||++|.+|+.............. .
T Consensus 160 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (287)
T cd07838 160 EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRS 239 (287)
T ss_pred CcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchh
Confidence 32 23467889999999988899999999999999999999877754322110000000 0
Q ss_pred ccccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 LMDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 ~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....... .......+..+.+++.+||..||.+||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 240 SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000 11112345778899999999999999999999865
No 348
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.6e-37 Score=299.20 Aligned_cols=249 Identities=20% Similarity=0.281 Sum_probs=194.9
Q ss_pred CCcccccccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 129 (488)
+..+.+.+.||+|+||.||+|.... ++.||||.++..... ....+.+|+.++.+.. ||||+++++++......++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 4456778899999999999999654 889999999764322 3346777888777775 999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
||+. ++|.+++.. ....+++..+..++.||+.||.|||+. + ++||||+|+||++++++.+||+|||++.......
T Consensus 94 e~~~-~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 94 ELMS-TCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred eccC-cCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 9995 677777654 235799999999999999999999984 7 9999999999999999999999999987654322
Q ss_pred --ccccccCCCCccccccCC----cccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc-CCCCChhhHH
Q 011349 208 --SYSTNLAFTPPEYLRTGR----VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL-EGHFSNDDGT 280 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~----~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 280 (488)
...++..|+|||.+.+.. ++.++||||||+++|+|++|+.||........ .......... ........+.
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 247 (296)
T cd06618 171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE---VLTKILQEEPPSLPPNEGFSP 247 (296)
T ss_pred ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH---HHHHHhcCCCCCCCCCCCCCH
Confidence 234678899999987653 78899999999999999999988754211100 0001111110 0011113467
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+++.+||..||.+||++.+++.+.
T Consensus 248 ~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 248 DFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 899999999999999999999999873
No 349
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.6e-37 Score=304.96 Aligned_cols=246 Identities=21% Similarity=0.275 Sum_probs=191.4
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC--CCChHHHHHHHHHHhhc-CCCCCcccccceecC--CeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA--WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEG--EERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~--~~~~lv~ 129 (488)
+.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++++ +||||+++++++... ...++||
T Consensus 9 y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~ 88 (337)
T cd07852 9 YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVF 88 (337)
T ss_pred HHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEe
Confidence 456678899999999999954 68889999885432 22345678899999999 999999999988653 3689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||++ ++|..++.. ..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 89 e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 89 EYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred cccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 9997 699988853 37899999999999999999999999 9999999999999999999999999987654322
Q ss_pred -------ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------------------
Q 011349 208 -------SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------------------- 260 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------------------- 260 (488)
...++..|+|||.+.+ ..++.++||||||+++|+|+||+.||...........
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSP 243 (337)
T ss_pred ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhh
Confidence 2356889999998865 4578899999999999999999988754321110000
Q ss_pred cccccccccc------CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 NFLMLMDSCL------EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 ~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+.... ........+.++.+++.+||+.+|++|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 244 FAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000000 001111246789999999999999999999999987
No 350
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=285.83 Aligned_cols=247 Identities=19% Similarity=0.228 Sum_probs=193.4
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 59 VSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
++.||.|+||+|++.. .+.|+..|||+++.... .+..++..|.+...+- +.||||+++|.+..++..++.||+|+ -
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-I 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-h
Confidence 4578999999999998 55799999999987764 3356788888876666 69999999999999999999999996 7
Q ss_pred Chhhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Ccc
Q 011349 136 TLSKHLF---HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSY 209 (488)
Q Consensus 136 sL~~~l~---~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 209 (488)
||..+.+ ......+++.-.-+|..-...||.||-+.-+||||||||+|||++..|.+||||||++....+. +.-
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~d 227 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVD 227 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhc
Confidence 7766543 2355679999999999999999999998766999999999999999999999999998765443 233
Q ss_pred ccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc-CCCCChhhHHHHHHHH
Q 011349 210 STNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL-EGHFSNDDGTELVRLA 286 (488)
Q Consensus 210 ~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li 286 (488)
.|-..|||||.+.. ..|+-+|||||||++|+|+.||+.|+..+..-.-....+..--.+.+ ...-....+..+..+|
T Consensus 228 aGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fi 307 (361)
T KOG1006|consen 228 AGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFI 307 (361)
T ss_pred cCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHH
Confidence 56678999999854 44888999999999999999999887655321111110000000111 1111123567899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
..||.+|-..||.+.+++++
T Consensus 308 ntCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 308 NTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHhhcccccCcchhhhhcC
Confidence 99999999999999999875
No 351
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-37 Score=299.16 Aligned_cols=246 Identities=19% Similarity=0.240 Sum_probs=196.2
Q ss_pred ccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC----CChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW----PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
+.+.+.||.|+||.||+|.. .+|..||+|+++.... ...+.+.+|+.+++++ +|+||+++++++..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 46778899999999999985 3688999999875331 2245688999999999 5999999999999888999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 99999999999999863 456899999999999999999999999 999999999999999999999999998765432
Q ss_pred C-----ccccccCCCCccccccC--CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 207 K-----SYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 207 ~-----~~~~t~~y~aPE~~~~~--~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
. ...++..|+|||.+.+. .++.++||||||+++|+|+||..|+......... ......+.. ....++...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ-AEISRRILK-SEPPYPQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH-HHHHHHhhc-cCCCCCccCC
Confidence 1 34578899999998753 4678999999999999999999887532110000 000000000 1122344567
Q ss_pred HHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rp-----s~~~il~~ 306 (488)
+.+.+++.+||..+|++|| ++.+++.+
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 8899999999999999997 77888776
No 352
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2e-37 Score=300.58 Aligned_cols=251 Identities=20% Similarity=0.245 Sum_probs=190.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCC------
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGE------ 123 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 123 (488)
.+.|.++++||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 34567889999999999999995 46889999998654322 2335678999999999999999999886543
Q ss_pred --eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 124 --ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 124 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
..++||||+. ++|.+.+.. ....+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 3599999996 688887753 3346899999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCCC--------ccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------ccccccc
Q 011349 202 NSRDGK--------SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------GKNFLML 265 (488)
Q Consensus 202 ~~~~~~--------~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~~ 265 (488)
...... ...++..|+|||.+.+. .++.++||||||+++|||+||.+|+......... .......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 653321 23457789999988764 4788999999999999999999877543211000 0000000
Q ss_pred ---------cc-----cccCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 ---------MD-----SCLEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ---------~~-----~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+ ....... +...+..+.+++.+||..||.+|||+.++++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00 0000000 00123567899999999999999999999876
No 353
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.5e-37 Score=298.21 Aligned_cols=249 Identities=19% Similarity=0.243 Sum_probs=197.0
Q ss_pred ccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC----CChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW----PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
+.+.+.||+|++|.||++.. .+++.||||+++.... ...+.+.+|+.++.++ +||||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 46778899999999999883 3578899999875321 2235688999999999 5999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++.....
T Consensus 82 lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999886 3456899999999999999999999999 999999999999999999999999998764432
Q ss_pred C-----ccccccCCCCccccccCC--cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 207 K-----SYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 207 ~-----~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
. ...++..|++||.+.+.. .+.++||||||+++|||+||..|+................... ....+...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMS 236 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccC
Confidence 2 235788999999987654 7889999999999999999998875321110000000011111 122334456
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
..+.+++.+||+.+|++|||+.++...|+.
T Consensus 237 ~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 237 AEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 789999999999999999998877666543
No 354
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.2e-37 Score=304.28 Aligned_cols=264 Identities=15% Similarity=0.199 Sum_probs=199.4
Q ss_pred CHHHHHHHhc-CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCccccc
Q 011349 42 NLDQLRAATS-GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIG 117 (488)
Q Consensus 42 ~~~~~~~~~~-~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~ 117 (488)
+..|+..++. -...+.+.+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.+++.++||||+++++
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 81 (342)
T cd07879 2 YREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLD 81 (342)
T ss_pred chhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhh
Confidence 4445555541 223556788899999999999994 5689999999875321 12346889999999999999999999
Q ss_pred ceecCC------eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 118 CCCEGE------ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 118 ~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++.... ..++|+||+. .+|..++ +..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~ 155 (342)
T cd07879 82 VFTSAVSGDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCE 155 (342)
T ss_pred eecccccCCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCC
Confidence 886542 4699999996 5777655 245899999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc---------
Q 011349 192 PRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------- 260 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------- 260 (488)
++|+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........
T Consensus 156 ~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd07879 156 LKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235 (342)
T ss_pred EEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 999999998865433 23466889999999876 4688999999999999999999998865421100000
Q ss_pred ----------cccc---ccccccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH--hchhh
Q 011349 261 ----------NFLM---LMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS--LTPLQ 311 (488)
Q Consensus 261 ----------~~~~---~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--l~~~~ 311 (488)
.... .......... .+..+..+.+++.+||+.||.+||++.+++.| ++..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000 0000000000 11245678999999999999999999999987 55443
No 355
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-38 Score=308.66 Aligned_cols=192 Identities=22% Similarity=0.276 Sum_probs=167.8
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCC------eeeEEEec
Q 011349 60 SEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE------ERLLVAEF 131 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~ 131 (488)
+.||+|+||.||+|+ ..+|+.||||.++... ....+..-+|+++|++++|+|||+++++=.+.. ...+||||
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy 98 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY 98 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence 456999999999999 6789999999998754 334667889999999999999999998755433 46899999
Q ss_pred CCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec--CCCC--CeeccCCCcccCCCC
Q 011349 132 MPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGN--PRLSCFGLMKNSRDG 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~--~~~~--~kl~Dfgla~~~~~~ 206 (488)
|.||||+..+.+.+ ...|++.+.+.++.+++.||.|||+++ |+||||||.||++- .+|+ .||+|||.|+...++
T Consensus 99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~ 177 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN 177 (732)
T ss_pred cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence 99999999997643 356999999999999999999999999 99999999999993 4443 699999999988876
Q ss_pred C---ccccccCCCCccccc-cCCcccCCceEeehHHHHHHhhCCCCCCcc
Q 011349 207 K---SYSTNLAFTPPEYLR-TGRVIPESVVYSFGTLLLDLLSGKHIPPSH 252 (488)
Q Consensus 207 ~---~~~~t~~y~aPE~~~-~~~~~~~sDv~slG~il~el~tg~~p~~~~ 252 (488)
. +..||..|.+||... .+.|+..+|.|||||++|+++||..||-..
T Consensus 178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 5 668999999999998 488999999999999999999999998544
No 356
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=278.43 Aligned_cols=254 Identities=21% Similarity=0.218 Sum_probs=204.3
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccce
Q 011349 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCC 119 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 119 (488)
++.++.+.|. +.||+|+|+.|-.++ ..+|..+|||++.+.......++.+|++++.+++ |+||++++++|
T Consensus 74 ~F~d~YkLt~--------e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 74 KFEDMYKLTS--------ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred hHHHHHHhHH--------HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 4666666664 346999999999998 8899999999998876566778999999999995 99999999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeecc
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSC 196 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~D 196 (488)
.++..+|||||-|.||+|..+|. .+.-|++.++..+..+|+.||.|||.+| |.||||||+|||..... -+||||
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred cccceEEEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeec
Confidence 99999999999999999999998 5667999999999999999999999999 99999999999996544 479999
Q ss_pred CCCcccCCCC-----------CccccccCCCCccccc---c--CCcccCCceEeehHHHHHHhhCCCCCCcchhhh--hh
Q 011349 197 FGLMKNSRDG-----------KSYSTNLAFTPPEYLR---T--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL--IR 258 (488)
Q Consensus 197 fgla~~~~~~-----------~~~~~t~~y~aPE~~~---~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~--~~ 258 (488)
|.|..-.... .+.+|+..|||||+.. + ..|+.++|.||||||||-|++|-+||.+..... +.
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd 302 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD 302 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence 9987643221 1456778899999863 2 458889999999999999999999997652211 11
Q ss_pred cccc-----ccccccccCC--CCCh----hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 259 GKNF-----LMLMDSCLEG--HFSN----DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 259 ~~~~-----~~~~~~~~~~--~~~~----~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.. ..++..+..+ ++|. .++.+..++++.+|..|+.+|.++.+++.|
T Consensus 303 rGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 303 RGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 1110 1111111111 2333 356788999999999999999999999885
No 357
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.5e-37 Score=304.27 Aligned_cols=260 Identities=17% Similarity=0.225 Sum_probs=200.6
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCccc
Q 011349 39 REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNL 115 (488)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~ 115 (488)
+.....++..++++| .+++.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~~~~~~~y---~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~ 81 (345)
T cd07877 5 RQELNKTIWEVPERY---QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 81 (345)
T ss_pred hhhHHHHHhhccCce---EEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccce
Confidence 444556666666665 677888999999999998 45789999999975431 224568899999999999999999
Q ss_pred ccceecC------CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 116 IGCCCEG------EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 116 ~~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
++++... ...+++++++ |++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~ 156 (345)
T cd07877 82 LDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNED 156 (345)
T ss_pred eeeeeecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCC
Confidence 9987543 3468888887 789988874 346999999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC-ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------
Q 011349 190 GNPRLSCFGLMKNSRDGK-SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------- 260 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~-~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------- 260 (488)
+.+||+|||++....... ...++..|+|||.+.+ ..++.++|||||||++|||++|+.|++..........
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (345)
T cd07877 157 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236 (345)
T ss_pred CCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999999988654432 3467889999999876 5688899999999999999999988764321110000
Q ss_pred c---c------------ccccccccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 N---F------------LMLMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 ~---~------------~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. . ...+.......+ ....++.+.+++.+||..||.+||++.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 0 000000000000 11235678999999999999999999999988
No 358
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=258.30 Aligned_cols=248 Identities=21% Similarity=0.252 Sum_probs=197.8
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|..+++||+|+||+||+|+ .++++.||+|+++.+... -.....+|+-+|+.+.|+|||+++++...+..+-+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 4556788999999999999 677999999999865422 2457899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
. .+|..+... -++.++...+..++.|+++||.|+|+++ +.|||+||.|.||+.+|.+||+|||+++-..-. +.
T Consensus 84 d-qdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysa 160 (292)
T KOG0662|consen 84 D-QDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160 (292)
T ss_pred h-HHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence 6 788888765 4567999999999999999999999999 999999999999999999999999999865433 23
Q ss_pred cccccCCCCccccccC-CcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccc--------------cccccccCC
Q 011349 209 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFL--------------MLMDSCLEG 272 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~--------------~~~~~~~~~ 272 (488)
...|..|.+|.++.|. -|+.+.|+||-||++.|+.. |++.|++...+......+. .+.+-..-+
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp 240 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP 240 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence 3568999999999884 48899999999999999987 5555776544322211111 111111111
Q ss_pred CCCh---------hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 273 HFSN---------DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 273 ~~~~---------~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.++. .....-++++.+.+..+|..|.+++..+++
T Consensus 241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 2221 122345789999999999999999999876
No 359
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.9e-37 Score=304.82 Aligned_cols=248 Identities=17% Similarity=0.211 Sum_probs=192.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC----------
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG---------- 122 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---------- 122 (488)
+.+.+++.||.|+||.||+|. ..+|..||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 356788899999999999999 456899999999776655567789999999999999999999876543
Q ss_pred ----CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccC
Q 011349 123 ----EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCF 197 (488)
Q Consensus 123 ----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Df 197 (488)
...++||||++ ++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++ +++.++|+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCc
Confidence 35789999997 68988874 356999999999999999999999999 99999999999997 4567899999
Q ss_pred CCcccCCCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc---------
Q 011349 198 GLMKNSRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------- 260 (488)
Q Consensus 198 gla~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------- 260 (488)
|+++..... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 998754321 12246788999998754 5678899999999999999999998864321100000
Q ss_pred -----ccccccc-----cccCC-----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 -----NFLMLMD-----SCLEG-----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 -----~~~~~~~-----~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....... ..... ......+.++.+++.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000000 00000 0112345778999999999999999999999986
No 360
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=6.4e-37 Score=292.82 Aligned_cols=247 Identities=22% Similarity=0.264 Sum_probs=196.0
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.||+|++|.||+|+. .+++.||+|++.... ....+.+..|+.++++++|+||+++++++...+..++||||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 4567789999999999995 458999999998653 2234578899999999999999999999999999999999997
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 209 (488)
++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++...... ..
T Consensus 82 -~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 82 -MDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred -cCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 6999999642 246999999999999999999999999 9999999999999999999999999987654332 23
Q ss_pred ccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----------c------c---ccccccc
Q 011349 210 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----------K------N---FLMLMDS 268 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-----------~------~---~~~~~~~ 268 (488)
.++..|+|||.+.+. .++.++|||||||+++||++|.+|+.......... . . .......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 446789999998776 78999999999999999999988775542211000 0 0 0000000
Q ss_pred ccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 CLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... ...+..+..+.+++.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000 0111235789999999999999999999999875
No 361
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.4e-37 Score=291.20 Aligned_cols=244 Identities=14% Similarity=0.168 Sum_probs=195.4
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC-----CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA-----WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
|.+.+.||+|+||.||++... .+..+++|.++... ......+..|+.+++.++||||+++++++.+....++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 567788999999999999853 34556666665322 122346778999999999999999999999999999999
Q ss_pred ecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 130 EFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||+++++|.+++.. .....+++..+..++.|++.||.|||+.+ ++|+||||+||++++ +.++|+|||++......
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 99999999988853 23457999999999999999999999999 999999999999975 56999999998765432
Q ss_pred ---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....+++.|+|||.+.+..++.++|+||||+++|+|++|..|+.......... ... .......+...+.++.
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~ 234 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVL----RIV-EGPTPSLPETYSRQLN 234 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHH-cCCCCCCcchhcHHHH
Confidence 23457889999999988888999999999999999999998875432211111 111 1112223445678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||..+|++||++.+++.+
T Consensus 235 ~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 235 SIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHHHhcCChhhCcCHHHHhhC
Confidence 99999999999999999999976
No 362
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.8e-37 Score=301.64 Aligned_cols=251 Identities=19% Similarity=0.273 Sum_probs=195.9
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceec-CC
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCE-GE 123 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~ 123 (488)
..+++| .+++.||.|+||.||+|. ..++..||||++.... ....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 7 ~~~~~y---~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 7 EITNRY---VDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ccccce---EEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 345544 677888999999999998 4578999999886432 2234678899999999999999999998865 56
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
..++||||+ +++|.+++. ..++++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++...
T Consensus 84 ~~~lv~e~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQ 158 (328)
T ss_pred cEEEEeehh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCcccccccc
Confidence 789999999 578988884 456889999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh---------------h----cccc
Q 011349 204 RDG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI---------------R----GKNF 262 (488)
Q Consensus 204 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~---------------~----~~~~ 262 (488)
... ....++..|+|||.+.+ ..++.++|||||||++|+|+||+.||........ . ....
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd07856 159 DPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT 238 (328)
T ss_pred CCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh
Confidence 433 23456889999998866 5689999999999999999999988764321100 0 0000
Q ss_pred ccccccc-cCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLMDSC-LEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~~~~-~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+... ..... ....+..+.+++.+||+.+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 239 LRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 00011 12345789999999999999999999999887
No 363
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.3e-37 Score=297.20 Aligned_cols=247 Identities=23% Similarity=0.240 Sum_probs=191.6
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCC---------
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGE--------- 123 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------- 123 (488)
+.+.+.||.|+||.||+|... +|+.||||+++.... .....+.+|+.++++++||||+++++++....
T Consensus 9 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 88 (302)
T cd07864 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDK 88 (302)
T ss_pred hheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccC
Confidence 467788899999999999954 588999999975432 22356788999999999999999999887654
Q ss_pred -eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 124 -ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 124 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
..++|+||+++ +|...+.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++..
T Consensus 89 ~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~ 165 (302)
T cd07864 89 GAFYLVFEYMDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLARL 165 (302)
T ss_pred CcEEEEEcccCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCccccccc
Confidence 78999999985 77777753 2346999999999999999999999999 99999999999999999999999999886
Q ss_pred CCCCC-----ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------ccccccccc--
Q 011349 203 SRDGK-----SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------GKNFLMLMD-- 267 (488)
Q Consensus 203 ~~~~~-----~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~~~~-- 267 (488)
..... ...++..|+|||.+.+ ..++.++|||||||+++||++|++|+......... .........
T Consensus 166 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (302)
T cd07864 166 YNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDV 245 (302)
T ss_pred ccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccc
Confidence 54332 1234778999998865 45788999999999999999999877543211000 000000000
Q ss_pred ----------------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 ----------------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 ----------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... ......+..+.+++.+||..+|.+||++.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 246 IKLPYFNTMKPKKQYRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cccccccccccccccccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 0111246789999999999999999999999875
No 364
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=6.6e-37 Score=287.37 Aligned_cols=236 Identities=23% Similarity=0.252 Sum_probs=196.3
Q ss_pred CCCCCCceEEEEEeC-CCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||.|+||.||++... +++.||+|.+...... ....+..|+.++++++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 599999999999954 5889999998765432 245789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNL 213 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~ 213 (488)
.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 81 ~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLS--KEGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 99996 3446899999999999999999999999 999999999999999999999999998765442 2445788
Q ss_pred CCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 214 ~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
.|++||...+...+.++|+||||+++|++++|..|+......... ..... ....++...+..+.+++.+||..|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~----~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIY----EKILK--DPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHhc--CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 999999998888899999999999999999999887544221111 11111 122344445788999999999999
Q ss_pred CCCCCCH---HHHHHH
Q 011349 294 PRERPNA---KSLVAS 306 (488)
Q Consensus 294 p~~Rps~---~~il~~ 306 (488)
|++||++ .+++.+
T Consensus 232 p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 232 PTKRLGSGGAEEIKAH 247 (250)
T ss_pred HhhCCCcccHHHHHhC
Confidence 9999999 666554
No 365
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=304.65 Aligned_cols=243 Identities=22% Similarity=0.241 Sum_probs=204.3
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+..|.+...+|.|+|+.|-.+. ..+++..+||++.... .+..+|+.++... +||||+++.+++.++.+.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 35677888899999999999998 5678889999997663 3445778777766 6999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee-cCCCCCeeccCCCcccCCCC-C
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF-DQDGNPRLSCFGLMKNSRDG-K 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill-~~~~~~kl~Dfgla~~~~~~-~ 207 (488)
|++.|+-|.+.+.. ...+. ..+..|+.+|+.|+.|||++| ||||||||+|||+ ++.++++|+|||.++..... .
T Consensus 396 e~l~g~ell~ri~~--~~~~~-~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 396 ELLDGGELLRRIRS--KPEFC-SEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred hhccccHHHHHHHh--cchhH-HHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 99999988887752 23233 778889999999999999999 9999999999999 69999999999999887665 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
+.+-|..|.|||++....+++++|+||||++||+|++|+.|+.....+ .++......+.++..++....+|+.
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~ 544 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQ 544 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHH
Confidence 446688999999999999999999999999999999999988655333 2333333444555677889999999
Q ss_pred HhccCCCCCCCCHHHHHHHhch
Q 011349 288 RCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~ 309 (488)
+||+.||.+||++.++..|-..
T Consensus 545 ~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 545 QLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HhccCChhhCcChhhhccCcch
Confidence 9999999999999999988443
No 366
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4.3e-37 Score=301.65 Aligned_cols=244 Identities=19% Similarity=0.211 Sum_probs=190.9
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--------------hHHHHHHHHHHhhcCCCCCcccccceecCCe
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--------------SRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 124 (488)
+.||.|+||+||+|.. .+++.||||++....... ...+.+|+++++.++|+||+++++++..++.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 94 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF 94 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence 5589999999999994 468999999986543221 1247899999999999999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+. ++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 95 ~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 95 INLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLARRYG 170 (335)
T ss_pred EEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCccceeecc
Confidence 999999997 68999886 4456999999999999999999999999 9999999999999999999999999987554
Q ss_pred CC------------------CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc----
Q 011349 205 DG------------------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN---- 261 (488)
Q Consensus 205 ~~------------------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~---- 261 (488)
.. ....++..|+|||.+.+. .++.++|||||||++|||+||.+|+............
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~ 250 (335)
T PTZ00024 171 YPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELL 250 (335)
T ss_pred cccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 10 122357789999998764 4688999999999999999999887644221100000
Q ss_pred -------ccccc--------ccccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 262 -------FLMLM--------DSCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 262 -------~~~~~--------~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+.... ...... ......+..+.+++.+||+.+|++|||+.+++.+-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 251 GTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred CCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 00000 000000 00112356789999999999999999999999863
No 367
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=7.6e-37 Score=296.62 Aligned_cols=250 Identities=20% Similarity=0.229 Sum_probs=190.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCC-------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGE------- 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 123 (488)
..+.+++.||.|+||.||+|.. .+++.||||++......+ ...+.+|+++++.++||||+++++++....
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence 4567888999999999999994 468899999986543222 346789999999999999999999875433
Q ss_pred -eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 124 -ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 124 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
..++||||+. ++|...+.. ....+++.++..++.||++||.|||+.+ ++|+||||+||++++++.++|+|||+++.
T Consensus 88 ~~~~lv~~~~~-~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 88 GSVYMVTPYMD-HDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred ceEEEEEecCC-cCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccchh
Confidence 4699999997 577776653 3457999999999999999999999999 99999999999999999999999999875
Q ss_pred CCCCC---------------ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc------
Q 011349 203 SRDGK---------------SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------ 260 (488)
Q Consensus 203 ~~~~~---------------~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------ 260 (488)
..... ...+++.|+|||.+.+ ..++.++|||||||++|||++|++|+.+.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~ 244 (311)
T cd07866 165 YDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCG 244 (311)
T ss_pred ccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 43221 1234678999998865 4578999999999999999999988754321110000
Q ss_pred -----------ccccccccccCCCCC-------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 -----------NFLMLMDSCLEGHFS-------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 -----------~~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..............+ ....+.+.+++.+||..+|.+|||+.+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred CCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 000000000000001 1123678899999999999999999999875
No 368
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=6.1e-37 Score=285.32 Aligned_cols=224 Identities=20% Similarity=0.238 Sum_probs=181.6
Q ss_pred CCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhhhhcc
Q 011349 65 KAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH 143 (488)
Q Consensus 65 G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 143 (488)
|.+|.||++. ..+++.||+|.+.... .+.+|...+....||||+++++++...+..++||||++||+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 8899999999 4578999999997543 234455555666799999999999999999999999999999999863
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-CccccccCCCCccccc
Q 011349 144 WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLR 222 (488)
Q Consensus 144 ~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~ 222 (488)
...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 446999999999999999999999999 999999999999999999999999987655433 2344567899999998
Q ss_pred cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCH--
Q 011349 223 TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA-- 300 (488)
Q Consensus 223 ~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-- 300 (488)
+..++.++||||+|+++|||++|..|+....... ........+...++.+.+++.+||+.||++||++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 8889999999999999999999997654321110 0001112334456789999999999999999986
Q ss_pred ---HHHHHH
Q 011349 301 ---KSLVAS 306 (488)
Q Consensus 301 ---~~il~~ 306 (488)
++++.|
T Consensus 226 ~~~~~~~~h 234 (237)
T cd05576 226 AGVEDIKSH 234 (237)
T ss_pred cchHHHHcC
Confidence 555543
No 369
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6.6e-37 Score=301.00 Aligned_cols=247 Identities=16% Similarity=0.212 Sum_probs=194.2
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCC------ee
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGE------ER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~ 125 (488)
.|.+++.||+|+||.||+|. ..++..||||++...... ....+.+|+.+++.++||||+++++++.... ..
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07880 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDF 95 (343)
T ss_pred ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceE
Confidence 46788899999999999998 557999999998653322 2346889999999999999999999887543 35
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||+ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 96 ~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 96 YLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred EEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 8999999 789988874 456999999999999999999999999 99999999999999999999999999986644
Q ss_pred CC-ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------------------cccc
Q 011349 206 GK-SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------------------NFLM 264 (488)
Q Consensus 206 ~~-~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-------------------~~~~ 264 (488)
.. ...+++.|+|||.+.+ ..++.++|||||||++|+|++|..||........... ....
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (343)
T cd07880 171 EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKN 250 (343)
T ss_pred CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHH
Confidence 32 3467889999999876 4578899999999999999999988764321100000 0000
Q ss_pred c---cccccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 L---MDSCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 ~---~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. +...... ......++.+.+++.+|+..||.+|||+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 251 YVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0000000 0112345678999999999999999999999976
No 370
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-38 Score=289.24 Aligned_cols=234 Identities=21% Similarity=0.282 Sum_probs=196.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+++..||+|+||.|.+|.. -+.+.+|||+++.+..-. .+--..|-++|.-. +-|.++++..+|.+-+.+|+|||
T Consensus 351 FnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVME 430 (683)
T KOG0696|consen 351 FNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVME 430 (683)
T ss_pred cceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEE
Confidence 46788899999999999984 457789999998765322 22234566777666 57889999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC----CC
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DG 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~ 206 (488)
|+.||+|--+|. .-+.+.++.+..++.+|+-||-|||++| ||+||||.+|||+|.+|++||+|||+++... ..
T Consensus 431 yvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TT 507 (683)
T KOG0696|consen 431 YVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTT 507 (683)
T ss_pred EecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCcce
Confidence 999999988886 4567999999999999999999999999 9999999999999999999999999998543 33
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
.+++|||.|+|||.+..++|+.+.|.|||||+||||+.|.+||.+...+.+- ..+.+. .-.+|...+.+...+.
T Consensus 508 kTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF----~aI~eh--nvsyPKslSkEAv~ic 581 (683)
T KOG0696|consen 508 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF----QAIMEH--NVSYPKSLSKEAVAIC 581 (683)
T ss_pred eeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHHc--cCcCcccccHHHHHHH
Confidence 5789999999999999999999999999999999999999999876443322 222221 1246777789999999
Q ss_pred HHhccCCCCCCC
Q 011349 287 SRCLQYEPRERP 298 (488)
Q Consensus 287 ~~cl~~dp~~Rp 298 (488)
...|.+.|.+|.
T Consensus 582 kg~ltK~P~kRL 593 (683)
T KOG0696|consen 582 KGLLTKHPGKRL 593 (683)
T ss_pred HHHhhcCCcccc
Confidence 999999999995
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=4.8e-37 Score=302.06 Aligned_cols=248 Identities=19% Similarity=0.240 Sum_probs=195.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCe------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE------ 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 124 (488)
+.|.+++.||+|++|.||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++...+.
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 4567888999999999999995 468899999987532 2234567889999999999999999998876554
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++|+||+ +++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.++|+|||++....
T Consensus 95 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 95 VYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred EEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 89999999 679999885 356999999999999999999999999 9999999999999999999999999988654
Q ss_pred CC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-------cccc----------
Q 011349 205 DG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------FLML---------- 265 (488)
Q Consensus 205 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-------~~~~---------- 265 (488)
.. ....++..|+|||.+.+ ..++.++|||||||++|+|+||+.||+........... ....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07851 170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESAR 249 (343)
T ss_pred ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHH
Confidence 33 34467888999999865 46788999999999999999999888643221100000 0000
Q ss_pred -----cccccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 -----MDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 -----~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.......+ ....+..+.+++.+||..+|.+|||+.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 250 NYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000000 11236789999999999999999999999987
No 372
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=294.52 Aligned_cols=241 Identities=20% Similarity=0.185 Sum_probs=198.2
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 60 SEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
+.||+|.||+||-|+ .++|+.||||++.+..... ..++.+|+.+|+.++||.||.+...|.+.+.+++|||-+.| +
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-D 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-D 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-h
Confidence 457999999999999 5679999999998765443 45789999999999999999999999999999999999975 5
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeeccCCCcccCCCC---Cccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDG---KSYS 210 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~---~~~~ 210 (488)
..+.|...+.++|++.....++.||+.||.|||-++ |+|+||||+|||+.+. -.+||||||.|+.+... .+..
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence 555554546788999999999999999999999999 9999999999999644 36899999999988765 3678
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
||+.|+|||+++.+.|+.+-|+||.|||+|--++|..||.....-.-..++..-+.++... .+++...++||..+|
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW----~eis~~AidlIn~LL 803 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPW----SEISPEAIDLINNLL 803 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCch----hhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998886542211111111111111111 245678899999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 011349 291 QYEPRERPNAKSLVAS 306 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~ 306 (488)
+..-.+|.|.+..+.|
T Consensus 804 qVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 804 QVKMRKRYSVDKSLSH 819 (888)
T ss_pred HHHHHHhcchHhhccc
Confidence 9999999998887766
No 373
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.6e-36 Score=297.12 Aligned_cols=247 Identities=17% Similarity=0.222 Sum_probs=189.7
Q ss_pred ccccccCCCCCCceEEEEEe-CC--CcEEEEEEccCCC--CCChHHHHHHHHHHhhc-CCCCCcccccceecC----Cee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DE--DRWIAVKRFNRSA--WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEG----EER 125 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~----~~~ 125 (488)
+.+.+.||+|+||.||++.. .+ +..||||++.... ....+.+.+|+.+++++ .||||+++++++... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 46778899999999999994 34 7789999986432 12245688999999999 599999999875432 457
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++++||+. ++|.+.+. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 82 ~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 82 YLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 89999996 78998886 4567999999999999999999999999 99999999999999999999999999975442
Q ss_pred C--------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh------------------
Q 011349 206 G--------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR------------------ 258 (488)
Q Consensus 206 ~--------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~------------------ 258 (488)
. ....+|..|+|||.+.+ ..++.++|||||||++|+|++|.+||.........
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 1 12467889999998765 46889999999999999999999887543210000
Q ss_pred -ccc---cccccccccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 259 -GKN---FLMLMDSCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 259 -~~~---~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... ........... ......+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000 00000000000 0111235789999999999999999999999876
No 374
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-38 Score=274.76 Aligned_cols=250 Identities=20% Similarity=0.240 Sum_probs=194.2
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC--------Ce
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--------EE 124 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~~ 124 (488)
|..+.++|+|.||.||+|+ ..+|+.||+|++-..+ ..-.....+|+++|..+.|+|++.++..|... ..
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 4445678999999999999 5568889999875432 22345688999999999999999999998642 34
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
+|+||.+|+ -+|..++.. ....++..++.+++.++..||.|+|+.. |+|||+||+|+||+.+|.+||+|||+++...
T Consensus 99 ~ylVf~~ce-hDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 99 FYLVFDFCE-HDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred eeeeHHHhh-hhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeecccccccee
Confidence 899999997 689988864 3467999999999999999999999998 9999999999999999999999999997654
Q ss_pred CCC--------ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhh-------hhcccccccccc
Q 011349 205 DGK--------SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-------IRGKNFLMLMDS 268 (488)
Q Consensus 205 ~~~--------~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~-------~~~~~~~~~~~~ 268 (488)
... ....|..|.+||.+.| ..++++.|||+-|||+.||+||.+.+.+..... .-+....+.++.
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~ 255 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN 255 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence 432 2234889999999987 679999999999999999999998776542211 111111111111
Q ss_pred ---------ccCCCCCh-------------hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 269 ---------CLEGHFSN-------------DDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 269 ---------~~~~~~~~-------------~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
....+.+. .-.++..+|+..++..||.+|+++++++.|--
T Consensus 256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 00000110 11246889999999999999999999999854
No 375
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.6e-37 Score=317.38 Aligned_cols=248 Identities=20% Similarity=0.231 Sum_probs=186.0
Q ss_pred HHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecC--
Q 011349 47 RAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG-- 122 (488)
Q Consensus 47 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-- 122 (488)
.+.-++| ..+..||+||||.||+++ .-+|+.||||+|.... ......+.+|+..|.+|+|||||+++..|.+.
T Consensus 475 SRY~~DF---EEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 475 SRYLNDF---EELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhHhhhh---HHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 4555566 445567999999999999 4489999999998764 12234689999999999999999987644310
Q ss_pred --------------------------------------------------------------------------------
Q 011349 123 -------------------------------------------------------------------------------- 122 (488)
Q Consensus 123 -------------------------------------------------------------------------------- 122 (488)
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence
Q ss_pred -------------------------------------CeeeEEEecCCCCChhhhhccCCCCCC-CHHHHHHHHHHHHHH
Q 011349 123 -------------------------------------EERLLVAEFMPNETLSKHLFHWENQPM-KWAMRVRVALYLAQA 164 (488)
Q Consensus 123 -------------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l-~~~~~~~i~~~i~~~ 164 (488)
..+||-||||+..+|.+++.. +... .....++++++|++|
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~--N~~~~~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR--NHFNSQRDEAWRLFREILEG 709 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh--cccchhhHHHHHHHHHHHHH
Confidence 014788999998888877753 2222 467899999999999
Q ss_pred HHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC----------------------CCCccccccCCCCccccc
Q 011349 165 LDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----------------------DGKSYSTNLAFTPPEYLR 222 (488)
Q Consensus 165 l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----------------------~~~~~~~t~~y~aPE~~~ 222 (488)
|.|+|++| +|||||||.||++|+++.|||+|||+|.... +.+...||.-|+|||++.
T Consensus 710 LaYIH~~g-iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 710 LAYIHDQG-IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHHHHhCc-eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 99999999 9999999999999999999999999998621 112457899999999998
Q ss_pred cC---CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC--CChhhHHHHHHHHHHhccCCCCCC
Q 011349 223 TG---RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FSNDDGTELVRLASRCLQYEPRER 297 (488)
Q Consensus 223 ~~---~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~R 297 (488)
+. .|+.|+|+||||||++||+.- |...- -+...+..+.+..++.+ +.....+.-..+|.+|++.||.+|
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~TsM---ERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kR 862 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLYP---FGTSM---ERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKR 862 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhcc---CCchH---HHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccC
Confidence 74 499999999999999999854 33221 11111111112211111 222233455789999999999999
Q ss_pred CCHHHHHHH
Q 011349 298 PNAKSLVAS 306 (488)
Q Consensus 298 ps~~~il~~ 306 (488)
||+.++|.+
T Consensus 863 PtA~eLL~s 871 (1351)
T KOG1035|consen 863 PTATELLNS 871 (1351)
T ss_pred CCHHHHhhc
Confidence 999999875
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.6e-36 Score=320.84 Aligned_cols=146 Identities=25% Similarity=0.276 Sum_probs=130.5
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+..|.++++||+|+||.||+|... +++.||||+++...... ...+..|+.++..++||||+++++++......|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 356788999999999999999954 68899999997543222 35788999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
|||+.|++|.+++. ....+++..++.|+.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999986 3456899999999999999999999999 9999999999999999999999999875
No 377
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-37 Score=281.84 Aligned_cols=249 Identities=16% Similarity=0.170 Sum_probs=197.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-C-CC----CcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-S-ER----LVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~n----iv~~~~~~~~~~~~~l 127 (488)
.|.++..+|+|+||.|-.+. .+.+..||||+++... .-.+...-|+++|+++. + |+ +|.+.++|...++.+|
T Consensus 90 Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCi 168 (415)
T KOG0671|consen 90 RYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICI 168 (415)
T ss_pred ceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEE
Confidence 56788999999999999998 4457889999997543 22345678999999993 2 32 7888889999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-------------------
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ------------------- 188 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~------------------- 188 (488)
|+|.+ |.|+.+++....-.+++..++..|+.|+++++.|||+.+ ++|-||||+|||+.+
T Consensus 169 vfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 169 VFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred EEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 99999 679999998777788999999999999999999999999 999999999999932
Q ss_pred -CCCCeeccCCCcccCCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhh---hhcccc-
Q 011349 189 -DGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL---IRGKNF- 262 (488)
Q Consensus 189 -~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~---~~~~~~- 262 (488)
+..++|+|||.|...... ...+.|..|.|||++.+-.++.++||||+||||.|+.||...|+.+.... +....+
T Consensus 247 ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG 326 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG 326 (415)
T ss_pred CCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC
Confidence 235789999999876654 45577999999999999999999999999999999999998887653111 000000
Q ss_pred --------------------------------ccccccccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 --------------------------------LMLMDSCLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 --------------------------------~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+.+.. .........++.+|+.+||..||.+|+|+.|++.|
T Consensus 327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 000000000 00111234679999999999999999999999987
No 378
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-36 Score=282.18 Aligned_cols=252 Identities=20% Similarity=0.285 Sum_probs=192.9
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc--CCCCCcccccceecCC----eeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL--RSERLVNLIGCCCEGE----ERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~----~~~lv~e 130 (488)
++++.+|+|.||.||+|.+ +++.||||++... +.+.|+.|-.+.+.. +|+||++++++-..+. .++||++
T Consensus 213 ~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hhHHHhhcCccceeehhhc-cCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 3455669999999999998 4478999999753 356788888877655 7999999999865554 7899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------GRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
|.+.|+|.++|+ ...++|....+|+..+++||+|||+. .+|+|||||..|||+-+|++.-|+|||||..
T Consensus 289 fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 289 FHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred eccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 999999999994 56799999999999999999999984 2399999999999999999999999999987
Q ss_pred CCCCC------ccccccCCCCccccccCC-cc-----cCCceEeehHHHHHHhhCCCCCCcchhh--------hhhc---
Q 011349 203 SRDGK------SYSTNLAFTPPEYLRTGR-VI-----PESVVYSFGTLLLDLLSGKHIPPSHALD--------LIRG--- 259 (488)
Q Consensus 203 ~~~~~------~~~~t~~y~aPE~~~~~~-~~-----~~sDv~slG~il~el~tg~~p~~~~~~~--------~~~~--- 259 (488)
...+. ...||.+|||||++.+.. +. .+.||||+|.|||||++..........+ .+..
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 65432 357899999999997632 22 3699999999999999876432100000 0000
Q ss_pred -ccccc-ccccccCCCCChh-----hHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 260 -KNFLM-LMDSCLEGHFSND-----DGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 260 -~~~~~-~~~~~~~~~~~~~-----~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..+.. ++....++.++.. -..-+.+.+..||+.||+.|.|+.=+-+.+..+.....
T Consensus 446 ~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 446 LEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 00111 1111122233322 24668899999999999999999998888887776554
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=302.27 Aligned_cols=244 Identities=14% Similarity=0.219 Sum_probs=204.4
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec-----CCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE-----GEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~-----~~~~~lv~ 129 (488)
.|+..+|.|.+|.||+++ .++++.+|||+...+. ...+++..|..+|+.. .|||++.++|+|.. ++.++|||
T Consensus 22 ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVM 100 (953)
T KOG0587|consen 22 EIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVM 100 (953)
T ss_pred EEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEe
Confidence 677788999999999999 7789999999998766 3456788899999998 59999999999863 56899999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
|||.|||..|+++...+..+.|..+..|++.++.||.+||... ++|||||-.|||++.++.|||+|||++.....
T Consensus 101 EfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~gr 179 (953)
T KOG0587|consen 101 EFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGR 179 (953)
T ss_pred eccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeeccccc
Confidence 9999999999998877889999999999999999999999998 99999999999999999999999999876544
Q ss_pred CCccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccc-cccccCCCCChhhH
Q 011349 206 GKSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML-MDSCLEGHFSNDDG 279 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 279 (488)
..+..||+.|||||++.. ..|+..+|+||||++..||.-|.+|+-.. .....+..+ ..+.....-+...+
T Consensus 180 RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm----HPmraLF~IpRNPPPkLkrp~kWs 255 (953)
T KOG0587|consen 180 RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM----HPMRALFLIPRNPPPKLKRPKKWS 255 (953)
T ss_pred ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc----chhhhhccCCCCCCccccchhhHH
Confidence 347789999999999964 34777999999999999999998775332 111111111 11122222355678
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.++|..||.+|.++||++.+++.|
T Consensus 256 ~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 256 KKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred HHHHHHHHHHHhhccccCcchhhhccC
Confidence 999999999999999999999999876
No 380
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=302.08 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=208.2
Q ss_pred cccccCCCCCCceEEEEE-eCCCc----EEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDR----WIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+..++||+|+||+||+|. ...|. +||||++..... ....++..|+-+|.+++|||+++++++|.... +.||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 345788999999999999 44443 689999876543 34678999999999999999999999997755 889999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcc-
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY- 209 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~- 209 (488)
|+++|+|.++++. .+.++.....+.|..||++||.|||.+. ++||||-.+|||+..-.++|+.|||+++........
T Consensus 778 ~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 778 LMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred hcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 9999999999976 5567999999999999999999999998 999999999999999999999999999987654322
Q ss_pred -----ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 210 -----STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 210 -----~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...+.|||-|.+....++.+||||||||++||++| |..|..+... ..+..++....+...|+.++-++.
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-----~eI~dlle~geRLsqPpiCtiDVy 930 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-----EEIPDLLEKGERLSQPPICTIDVY 930 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-----HHhhHHHhccccCCCCCCccHHHH
Confidence 22467999999999999999999999999999988 6666655322 223333333344456777889999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.++.+||..|+..||+++++...+.++.+.
T Consensus 931 ~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 931 MVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred HHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 999999999999999999999998876554
No 381
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=278.38 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=194.6
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc--CCCCCcccccceecCC----eeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL--RSERLVNLIGCCCEGE----ERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~----~~~lv~e 130 (488)
.+++.+|+|.||.||+|.+ .|+.||||+|... +.+.+.+|.++.+.+ +|+||+.+++.-..+. .++||++
T Consensus 214 ~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTd 289 (513)
T KOG2052|consen 214 VLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTD 289 (513)
T ss_pred EEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeee
Confidence 5678899999999999998 6677999999743 467889999998876 9999999999865543 5899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----C--CcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-----G--RALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~--~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
|.+.|||.|+|. ...++....++++..++.||++||.. | -|.|||||..|||+..++..-|+|+|||-..
T Consensus 290 YHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h 366 (513)
T KOG2052|consen 290 YHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 366 (513)
T ss_pred cccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEe
Confidence 999999999994 57799999999999999999999963 2 2999999999999999999999999998755
Q ss_pred CCC--------CccccccCCCCccccccCC----c--ccCCceEeehHHHHHHhhCC----------CCCCcchhhhhhc
Q 011349 204 RDG--------KSYSTNLAFTPPEYLRTGR----V--IPESVVYSFGTLLLDLLSGK----------HIPPSHALDLIRG 259 (488)
Q Consensus 204 ~~~--------~~~~~t~~y~aPE~~~~~~----~--~~~sDv~slG~il~el~tg~----------~p~~~~~~~~~~~ 259 (488)
... ...+||.+|||||++.... + -..+||||||.|+||+.... .||.+........
T Consensus 367 ~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~ 446 (513)
T KOG2052|consen 367 DSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSF 446 (513)
T ss_pred cccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCH
Confidence 432 3568999999999997532 2 13699999999999987542 3444332221111
Q ss_pred cccccc-cccccCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 260 KNFLML-MDSCLEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 260 ~~~~~~-~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
+.+..+ ....+++.. +......+.+|++.||..+|..|.|+-.+.+.|.++..
T Consensus 447 eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 447 EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 111111 111222222 23455778899999999999999999999999888775
No 382
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=307.98 Aligned_cols=250 Identities=20% Similarity=0.301 Sum_probs=205.3
Q ss_pred ccccCCCCCCceEEEEEeC----C----CcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 58 IVSEHGEKAPNVVYKGLVD----E----DRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
+.+.||+|.||.|++|... . ...||||.++..... +.+.+..|+++|..+ +|+||+.++|+|...+..++
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~ 379 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYV 379 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEE
Confidence 3347899999999999832 1 346999999876533 356799999999999 69999999999999999999
Q ss_pred EEecCCCCChhhhhccCC------------C--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 128 VAEFMPNETLSKHLFHWE------------N--QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
|+||+..|+|.+++++.+ . ..++....+.++.||+.|+.||++.. +|||||-.+|||+..+..+|
T Consensus 380 v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~k 458 (609)
T KOG0200|consen 380 IVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIK 458 (609)
T ss_pred EEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEE
Confidence 999999999999997533 0 13889999999999999999999998 99999999999999999999
Q ss_pred eccCCCcccCCCCCcc-----cc--ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc
Q 011349 194 LSCFGLMKNSRDGKSY-----ST--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 194 l~Dfgla~~~~~~~~~-----~~--t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 266 (488)
|+|||+++.......+ .+ ...|||||.+....|+.+||||||||+||||+|...+|+.... ....+.+.+
T Consensus 459 IaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~---~~~~l~~~l 535 (609)
T KOG0200|consen 459 IADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP---PTEELLEFL 535 (609)
T ss_pred EccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC---cHHHHHHHH
Confidence 9999999976554322 11 2459999999999999999999999999999996654443210 011122234
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
....+...|..++.++.+++..||+.+|++||++.++.+.+....
T Consensus 536 ~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 536 KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 444555667778899999999999999999999999999998853
No 383
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=277.70 Aligned_cols=247 Identities=21% Similarity=0.295 Sum_probs=193.3
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC-CCC------hHHHHHHHHHHhhcCCCCCcccccceec-CCeee
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA-WPD------SRQFLEEARAVGLLRSERLVNLIGCCCE-GEERL 126 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~ 126 (488)
|-++..||+|+|+.||+|. +..++.||||+-..+. +.+ .+...+|.++-+.|.||.||++|++|.- .+.+|
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC 544 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence 4567789999999999999 6678899999865432 122 1246789999999999999999999965 45689
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeec---CCCCCeeccCCCccc
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFD---QDGNPRLSCFGLMKN 202 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~ 202 (488)
-|.|||+|.+|+-+|+ ....+++.++..|+.||+.||.||.+. .||||-||||.|||+- .-|.+||+||||++.
T Consensus 545 TVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred eeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 9999999999998887 567799999999999999999999986 4699999999999995 447899999999997
Q ss_pred CCCCC-----------ccccccCCCCccccccC----CcccCCceEeehHHHHHHhhCCCCCCcchh--hhhhccccccc
Q 011349 203 SRDGK-----------SYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHAL--DLIRGKNFLML 265 (488)
Q Consensus 203 ~~~~~-----------~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~il~el~tg~~p~~~~~~--~~~~~~~~~~~ 265 (488)
+.... ...||..|++||.+.-+ +.+.++||||.|||+|+++.|+.||-.... +.+....+...
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkA 702 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKA 702 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcc
Confidence 75432 24679999999998643 468899999999999999999999864421 11111111111
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ..-+.-+.++.+...+|.+||++.-++|....++..+
T Consensus 703 tE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 703 TE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred ee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 10 0111122456788999999999999999988887765
No 384
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=287.45 Aligned_cols=249 Identities=16% Similarity=0.180 Sum_probs=209.3
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCc-EEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDR-WIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++..+++..||-|+||.|-++...... .+|+|++++...-+ .+.+..|-.+|..++.|.||++|--|.+...+|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 344467788999999999999865544 48999998654433 34588899999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
||-|-||.|+..+. .++.|+..+...++..+++|+.|||++| ||+|||||+|.++|.+|-+||.|||+|+.+..+.
T Consensus 499 mEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 499 MEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred HHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 99999999999997 6778999999999999999999999999 9999999999999999999999999999887654
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
+++|||.|.|||.+.....+.++|.||||+++|||+||.+||.+...-. .. ..++..+-.-.+|..++....+|
T Consensus 576 TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk-tY---n~ILkGid~i~~Pr~I~k~a~~L 651 (732)
T KOG0614|consen 576 TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK-TY---NLILKGIDKIEFPRRITKTATDL 651 (732)
T ss_pred eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH-HH---HHHHhhhhhhhcccccchhHHHH
Confidence 7899999999999999999999999999999999999999886542111 11 11222222234666778889999
Q ss_pred HHHhccCCCCCCCC-----HHHHHHHhc
Q 011349 286 ASRCLQYEPRERPN-----AKSLVASLT 308 (488)
Q Consensus 286 i~~cl~~dp~~Rps-----~~~il~~l~ 308 (488)
|.+++..+|.+|.. +.+|-+|-.
T Consensus 652 ik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 652 IKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred HHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 99999999999964 777777743
No 385
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=8.4e-36 Score=256.08 Aligned_cols=259 Identities=19% Similarity=0.265 Sum_probs=208.5
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccc
Q 011349 39 REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLI 116 (488)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~ 116 (488)
..++++.....+.+-+.|++++++|+|.++.||.|. ..+.+.++||++++.. .+.+.+|+.+|+.|+ ||||++++
T Consensus 23 eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~ 99 (338)
T KOG0668|consen 23 EYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLL 99 (338)
T ss_pred hhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehh
Confidence 457888877778888899999999999999999999 5678889999998654 568999999999997 99999999
Q ss_pred cceecC--CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCe
Q 011349 117 GCCCEG--EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPR 193 (488)
Q Consensus 117 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~k 193 (488)
+...++ ..+.||+||+.+.+...+. ..|+...+..++.+++.||.|+|+.| |+|||+||.|++||. .-.++
T Consensus 100 DiV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~rkLr 173 (338)
T KOG0668|consen 100 DIVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELRKLR 173 (338)
T ss_pred hhhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhceee
Confidence 998765 4688999999988777655 35888899999999999999999999 999999999999985 45699
Q ss_pred eccCCCcccCCCCCcc---ccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchh---hhhh--------
Q 011349 194 LSCFGLMKNSRDGKSY---STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL---DLIR-------- 258 (488)
Q Consensus 194 l~Dfgla~~~~~~~~~---~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~---~~~~-------- 258 (488)
|+|+|+|....++..+ ..+..|--||.+.. ..++.+-|+|||||++..|+..+.||..... ....
T Consensus 174 lIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~ 253 (338)
T KOG0668|consen 174 LIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTD 253 (338)
T ss_pred eeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChH
Confidence 9999999988877654 44678899999976 5688999999999999999999998753210 0000
Q ss_pred -------------cccccccccc--------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 259 -------------GKNFLMLMDS--------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 259 -------------~~~~~~~~~~--------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+..++.. .....-..-.+++..+++.+.|..|-.+|+|+.|.+.|
T Consensus 254 el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 254 ELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 0011111111 11111111235789999999999999999999999987
No 386
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.1e-34 Score=268.45 Aligned_cols=233 Identities=22% Similarity=0.279 Sum_probs=192.8
Q ss_pred CCceEEEEEeC-CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhhhhcc
Q 011349 66 APNVVYKGLVD-EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH 143 (488)
Q Consensus 66 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 143 (488)
+||.||+|... +++.||+|++....... .+.+.+|++.+++++|+||+++++.+......++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 57899999965 58999999998766444 67899999999999999999999999998999999999999999999863
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---CccccccCCCCccc
Q 011349 144 WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEY 220 (488)
Q Consensus 144 ~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~ 220 (488)
...+++..++.++.+++.+|.+||+.+ ++|+||+|+||++++++.++|+|||.+...... ....++..|++||.
T Consensus 81 --~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 --RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 233899999999999999999999999 999999999999999999999999998876553 34567889999999
Q ss_pred cccCCcccCCceEeehHHHHHHhhCCCCCCcc-hhhhhhccccccccccccCCCCCh--hhHHHHHHHHHHhccCCCCCC
Q 011349 221 LRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH-ALDLIRGKNFLMLMDSCLEGHFSN--DDGTELVRLASRCLQYEPRER 297 (488)
Q Consensus 221 ~~~~~~~~~sDv~slG~il~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dp~~R 297 (488)
+.+..++.++||||||+++++|++|..|+... ..... .............. ..+.++.+++.+||..+|++|
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 232 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLEL-----FKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKR 232 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH-----HHHHhccCCCCccccccCCHHHHHHHHHHccCCchhc
Confidence 98888999999999999999999999887542 11111 11111111111111 156789999999999999999
Q ss_pred CCHHHHHHH
Q 011349 298 PNAKSLVAS 306 (488)
Q Consensus 298 ps~~~il~~ 306 (488)
|++.+++++
T Consensus 233 p~~~~~~~~ 241 (244)
T smart00220 233 LTAEEALQH 241 (244)
T ss_pred cCHHHHhhC
Confidence 999999874
No 387
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-35 Score=284.45 Aligned_cols=259 Identities=18% Similarity=0.186 Sum_probs=200.4
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCccccc
Q 011349 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIG 117 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~ 117 (488)
.|..|.++-=+=+-...|+.||-|+||.|.++. .++...+|+|.+.+...- ....+..|-.||..-+.+-||+||-
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 455566665555556788999999999999998 566778999998754322 2235678999999999999999999
Q ss_pred ceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 118 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
.|.+.+.+|+||+|++||++-.+|. .-+-|++..+..++.++.+|+.+.|..| +|||||||+|||||.+|++||+||
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeec
Confidence 9999999999999999999999998 4567999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCC---------CC-------------------------------------CccccccCCCCccccccCCcccCCc
Q 011349 198 GLMKNSR---------DG-------------------------------------KSYSTNLAFTPPEYLRTGRVIPESV 231 (488)
Q Consensus 198 gla~~~~---------~~-------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sD 231 (488)
||+.-.. .+ -...||+.|+|||++....++..+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9974221 00 0235799999999999999999999
Q ss_pred eEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC---CHHHHHHH
Q 011349 232 VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP---NAKSLVAS 306 (488)
Q Consensus 232 v~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~ 306 (488)
.||.|||||||+.|++||-....... ......+...+.-.+....+++..++|.+++ .+++.|. .+++|..|
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~~t--q~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaH 928 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPGET--QYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAH 928 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCCcc--eeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcC
Confidence 99999999999999999865422211 1111122222333334445667777776655 3566774 34445554
No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-35 Score=249.28 Aligned_cols=198 Identities=19% Similarity=0.228 Sum_probs=167.6
Q ss_pred ccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCC
Q 011349 58 IVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+||+|++|.|-+.+ ..+|...|+|.+...-. +...+.++|+.+..+. .+|.+|.++|........++.||.|.
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~- 128 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD- 128 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-
Confidence 35678999999999988 56799999999976542 3345788899887766 69999999999999999999999996
Q ss_pred CChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--c-c
Q 011349 135 ETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--S-Y 209 (488)
Q Consensus 135 gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~-~ 209 (488)
-||..+..+ ..++.+++..+-+|+..+..||.|||++-.+||||+||+|||++.+|++|+||||++....+.- + .
T Consensus 129 tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~d 208 (282)
T KOG0984|consen 129 TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMD 208 (282)
T ss_pred hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHh
Confidence 788776543 2567899999999999999999999998669999999999999999999999999998766542 1 3
Q ss_pred ccccCCCCcccccc----CCcccCCceEeehHHHHHHhhCCCCCCcchhhh
Q 011349 210 STNLAFTPPEYLRT----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL 256 (488)
Q Consensus 210 ~~t~~y~aPE~~~~----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~ 256 (488)
.|-..|||||.+.. ..|+-+|||||||+++.||.+++.|++.+..+.
T Consensus 209 aGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF 259 (282)
T KOG0984|consen 209 AGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPF 259 (282)
T ss_pred cCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHH
Confidence 45678999999864 368899999999999999999999887664443
No 389
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1e-34 Score=299.76 Aligned_cols=249 Identities=18% Similarity=0.199 Sum_probs=165.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CC----CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccc------eec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DE----DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGC------CCE 121 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~------~~~ 121 (488)
.+.+.+.+.||+|+||.||+|.+ .+ +..||||++.... ..+....+ .++...+.+++.+... ...
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 44667888999999999999995 44 6889999986433 11111111 1222223333333222 134
Q ss_pred CCeeeEEEecCCCCChhhhhccCCC------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCc
Q 011349 122 GEERLLVAEFMPNETLSKHLFHWEN------------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183 (488)
Q Consensus 122 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~N 183 (488)
+...++||||+.+++|.+++..... .......+..++.||+.||.|||+.+ |+||||||+|
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~N 285 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVKPQN 285 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHHH
Confidence 5678999999999999998863211 01123446689999999999999999 9999999999
Q ss_pred eeecC-CCCCeeccCCCcccCCCC-----CccccccCCCCccccccC----------------------CcccCCceEee
Q 011349 184 ILFDQ-DGNPRLSCFGLMKNSRDG-----KSYSTNLAFTPPEYLRTG----------------------RVIPESVVYSF 235 (488)
Q Consensus 184 ill~~-~~~~kl~Dfgla~~~~~~-----~~~~~t~~y~aPE~~~~~----------------------~~~~~sDv~sl 235 (488)
||++. ++.+||+|||+++..... ....+|+.|+|||.+... .++.++|||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl 365 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA 365 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence 99985 689999999999865332 345778999999966432 13346699999
Q ss_pred hHHHHHHhhCCCCCCcchhhhh---hc--c---ccccccccccCCC------CChhhHHHHHHHHHHhccCCCCCCCCHH
Q 011349 236 GTLLLDLLSGKHIPPSHALDLI---RG--K---NFLMLMDSCLEGH------FSNDDGTELVRLASRCLQYEPRERPNAK 301 (488)
Q Consensus 236 G~il~el~tg~~p~~~~~~~~~---~~--~---~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~Rps~~ 301 (488)
||+||||+++..+......... .. . .+........... ..........+|+.+||..||++|||+.
T Consensus 366 GviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~ 445 (566)
T PLN03225 366 GLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAK 445 (566)
T ss_pred HHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHH
Confidence 9999999998654432211110 00 0 0001111110000 0001123455899999999999999999
Q ss_pred HHHHH
Q 011349 302 SLVAS 306 (488)
Q Consensus 302 ~il~~ 306 (488)
++++|
T Consensus 446 e~L~H 450 (566)
T PLN03225 446 AALAH 450 (566)
T ss_pred HHhCC
Confidence 99997
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=264.97 Aligned_cols=240 Identities=17% Similarity=0.248 Sum_probs=198.0
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 128 (488)
.+..+++.||+|+|..|..+. .++.+.+|+|++++.-. .+.+-.+.|-.+..+- +||.+|.+..+|.+...+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 345788899999999999999 56788899999986543 3455678888888877 699999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC----C
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS----R 204 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~ 204 (488)
.||++||+|--++. ..+.++++.+..+..+|+-||.|||+.| ||+||||..|||+|..|++||+|+|+++.. .
T Consensus 330 ieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~gd 406 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD 406 (593)
T ss_pred EEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCCCc
Confidence 99999999977665 5667999999999999999999999999 999999999999999999999999998753 2
Q ss_pred CCCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh----ccccccccccccCCCCChhhHH
Q 011349 205 DGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----GKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 205 ~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
..++++|||.|+|||.++|..|.++.|.|+|||+++||+.|+.||.--..+... .-.+..++...+ .+|...+-
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--riprslsv 484 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSLSV 484 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--cccceeeh
Confidence 345789999999999999999999999999999999999999998643221111 111122222222 23445566
Q ss_pred HHHHHHHHhccCCCCCCC
Q 011349 281 ELVRLASRCLQYEPRERP 298 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rp 298 (488)
....++...|.+||.+|.
T Consensus 485 kas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 485 KASHVLKGFLNKDPKERL 502 (593)
T ss_pred hhHHHHHHhhcCCcHHhc
Confidence 778899999999999995
No 391
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-33 Score=284.76 Aligned_cols=252 Identities=16% Similarity=0.172 Sum_probs=177.1
Q ss_pred cccccccCCCCCCceEEEEEe-----------------CCCcEEEEEEccCCCCCChHH--------------HHHHHHH
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-----------------DEDRWIAVKRFNRSAWPDSRQ--------------FLEEARA 103 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E~~~ 103 (488)
.+.+.++||+|+||+||+|.. ..++.||||+++.......++ ...|+.+
T Consensus 146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~ 225 (507)
T PLN03224 146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYM 225 (507)
T ss_pred CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHH
Confidence 446777889999999999963 235679999997654222223 3447777
Q ss_pred HhhcCCCCC-----cccccceec--------CCeeeEEEecCCCCChhhhhccCC----------------------CCC
Q 011349 104 VGLLRSERL-----VNLIGCCCE--------GEERLLVAEFMPNETLSKHLFHWE----------------------NQP 148 (488)
Q Consensus 104 l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~ 148 (488)
+.+++|.++ ++++++|.. .+..+|||||+++++|.+++.... ...
T Consensus 226 l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~ 305 (507)
T PLN03224 226 CAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK 305 (507)
T ss_pred HHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence 777876554 677777653 346899999999999999886321 123
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----ccccccCCCCcccccc
Q 011349 149 MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 223 (488)
Q Consensus 149 l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~~~t~~y~aPE~~~~ 223 (488)
+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++....... ...+|+.|+|||.+..
T Consensus 306 ~~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~ 384 (507)
T PLN03224 306 RDINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM 384 (507)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence 467789999999999999999999 9999999999999999999999999997654322 1233789999998854
Q ss_pred CCc----------------------ccCCceEeehHHHHHHhhCCCCCCcchh---hhhhc-c----ccccccccccCCC
Q 011349 224 GRV----------------------IPESVVYSFGTLLLDLLSGKHIPPSHAL---DLIRG-K----NFLMLMDSCLEGH 273 (488)
Q Consensus 224 ~~~----------------------~~~sDv~slG~il~el~tg~~p~~~~~~---~~~~~-~----~~~~~~~~~~~~~ 273 (488)
... ..+.||||+||++++|++|..++..... ..... . .+.........-.
T Consensus 385 ~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~ 464 (507)
T PLN03224 385 PQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS 464 (507)
T ss_pred CCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcc
Confidence 221 1247999999999999999753222100 00000 0 0000000111111
Q ss_pred CChhhHHHHHHHHHHhccCCC---CCCCCHHHHHHHh
Q 011349 274 FSNDDGTELVRLASRCLQYEP---RERPNAKSLVASL 307 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp---~~Rps~~~il~~l 307 (488)
.....+....+|+.++|..+| .+|+|+.++++|-
T Consensus 465 ~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp 501 (507)
T PLN03224 465 LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR 501 (507)
T ss_pred cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence 122346788999999999766 6899999999883
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=260.13 Aligned_cols=246 Identities=17% Similarity=0.250 Sum_probs=191.0
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC-----CeeeEEEec
Q 011349 60 SEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERLLVAEF 131 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~ 131 (488)
+.||.|+||+||-+. -++|+.||+|++...- ....+.+.+|+++|..++|.|++..++...-. ..+|+|+|+
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 457999999999998 4579999999986432 22356899999999999999999998876533 257899999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc---
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 208 (488)
|. .+|..+|. ..+.++...+.-++.||++||.|||+.+ |.||||||.|.|++++..+||||||+++.......
T Consensus 139 mQ-SDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM 214 (449)
T KOG0664|consen 139 MQ-SDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM 214 (449)
T ss_pred HH-hhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence 96 89999887 6778999999999999999999999999 99999999999999999999999999997655432
Q ss_pred --cccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchh--------hhhh-----------cccccccc
Q 011349 209 --YSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL--------DLIR-----------GKNFLMLM 266 (488)
Q Consensus 209 --~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~--------~~~~-----------~~~~~~~~ 266 (488)
...|..|.|||.++| ..|+.+.||||.||++.|++..+..|..... +... ++....++
T Consensus 215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~L 294 (449)
T KOG0664|consen 215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVL 294 (449)
T ss_pred HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhh
Confidence 244789999999998 5699999999999999999988877653311 0000 00111111
Q ss_pred ccccCC-C--------CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 267 DSCLEG-H--------FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 267 ~~~~~~-~--------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
....+. . .+..-..+...++..++..||++|.+..+.+.++..
T Consensus 295 R~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 295 RAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred ccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 111111 0 111223457788899999999999999999988643
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-34 Score=284.72 Aligned_cols=240 Identities=23% Similarity=0.231 Sum_probs=181.0
Q ss_pred CCcccccccCCCCCCc-eEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPN-VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
|+...++ |.|+.| .||+|.+ .|+.||||++-... ..-.++|+..|+.- .|||||++++.-.+....||..|
T Consensus 511 ~~~~eil---G~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEIL---GYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHc---ccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 4444444 666555 5799998 66789999986543 34678999999999 59999999998888899999999
Q ss_pred cCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---C--CCCeeccCCCcccC
Q 011349 131 FMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---D--GNPRLSCFGLMKNS 203 (488)
Q Consensus 131 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~--~~~kl~Dfgla~~~ 203 (488)
.|. .+|.+++... ..........+.++.|++.||++||+.+ ||||||||.||||+- + .+++|+|||+++..
T Consensus 584 LC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 584 LCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred Hhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 996 8999999752 1111111345778999999999999998 999999999999975 3 46899999999977
Q ss_pred CCCC-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhC-CCCCCcchhhhhhccccccccccccCCCCC
Q 011349 204 RDGK-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 204 ~~~~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
..+. ...||-+|+|||++.....+.++|||||||++|..++| .+||-...... .++..-......-...
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~---~NIl~~~~~L~~L~~~ 738 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ---ANILTGNYTLVHLEPL 738 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh---hhhhcCccceeeeccC
Confidence 5432 44689999999999988888899999999999999998 45554331111 0100000000000001
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+ .+..+||.+|+..+|..||++.+|+.|
T Consensus 739 ~d--~eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 739 PD--CEAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred ch--HHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 11 178999999999999999999999988
No 394
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-34 Score=277.05 Aligned_cols=248 Identities=17% Similarity=0.156 Sum_probs=205.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+|.++.++|.|++|.|||++ ..+++..|||+++.....+...++.|+-+++.++|||||-++|.+...+..+++||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 456778889999999999999 6679999999999888778888999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~ 208 (488)
.||+|.+..+ -.+++++.++..+.++.+.||.|||+.+ -+|||||-.|||+++.|.+|++|||.+..+.. ..+
T Consensus 95 gggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks 171 (829)
T KOG0576|consen 95 GGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS 171 (829)
T ss_pred CCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence 9999999776 5678999999999999999999999999 99999999999999999999999999876543 457
Q ss_pred cccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-ccccccccCCCCChhhHHHHHH
Q 011349 209 YSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 209 ~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
+.||+.|||||+.. .+.|+..+|||++|+...|+---.+|.... .+.....-. ....++. ...-.....+.+-+
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl-hpmr~l~LmTkS~~qpp-~lkDk~kws~~fh~ 249 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL-HPMRALFLMTKSGFQPP-TLKDKTKWSEFFHN 249 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc-chHHHHHHhhccCCCCC-cccCCccchHHHHH
Confidence 89999999999873 367899999999999999998777553221 111000000 0111111 11122345678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.|+.++|.+||+++.++.|
T Consensus 250 fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 250 FVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred HHHHHhcCCCccCCChhhheec
Confidence 9999999999999999998875
No 395
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.98 E-value=5.2e-33 Score=264.32 Aligned_cols=250 Identities=18% Similarity=0.182 Sum_probs=198.3
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC------CCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR------SERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~ 126 (488)
+.|.+.+..|+|-|++|.+|. ...|..||||+|..+.. -.+.=++|+++|.+|. -.|+++++-.|.+.+++|
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 357888889999999999999 44578999999976542 1234568999999995 358999999999999999
Q ss_pred EEEecCCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCC
Q 011349 127 LVAEFMPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSR 204 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 204 (488)
||+|-+. -+|.++|++. .+..|....+..++.|+.-||..|-..| |+|.||||.|||+++. ..+||||||.|....
T Consensus 511 lVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ 588 (752)
T KOG0670|consen 511 LVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFAS 588 (752)
T ss_pred EEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCccccccc
Confidence 9999995 8999999753 3456888999999999999999999999 9999999999999865 568999999998776
Q ss_pred CCC--ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh----------------hccc-----
Q 011349 205 DGK--SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI----------------RGKN----- 261 (488)
Q Consensus 205 ~~~--~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~----------------~~~~----- 261 (488)
... .+..+..|.|||.+.|.+|+...|+||.||+||||.||+..|++.....+ ..+.
T Consensus 589 eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqH 668 (752)
T KOG0670|consen 589 ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQH 668 (752)
T ss_pred cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhh
Confidence 543 45567889999999999999999999999999999999999987632211 0000
Q ss_pred c-------------------ccccccc---------c--CCCCChh---hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 F-------------------LMLMDSC---------L--EGHFSND---DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ~-------------------~~~~~~~---------~--~~~~~~~---~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+ ..++... + ...++.+ ....+.+|+..||..||++|.|..++|.|
T Consensus 669 FD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 669 FDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred cccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 0 0000000 0 0112222 33578899999999999999999999987
No 396
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.98 E-value=1.2e-32 Score=248.14 Aligned_cols=243 Identities=17% Similarity=0.234 Sum_probs=190.2
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCC--CCCChHHHHHHHHHHhhcCCCCCcccccceecC------CeeeE
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRS--AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EERLL 127 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~l 127 (488)
.-++.+|.|.- .|.-+. .-.+++||+|++... .....++..+|..++..+.|+||++++.+|.-. ...|+
T Consensus 20 ~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~ 98 (369)
T KOG0665|consen 20 VNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYL 98 (369)
T ss_pred eeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHH
Confidence 33556788877 566665 335888999998644 234467889999999999999999999998643 35799
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
|||+|. .+|...+. -.++-.++..|..|++.|+.|||+.+ |+||||||+||++..+..+||.|||+++.....
T Consensus 99 v~e~m~-~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~ 172 (369)
T KOG0665|consen 99 VMELMD-ANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDF 172 (369)
T ss_pred HHHhhh-hHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCccc
Confidence 999996 89988875 34788899999999999999999999 999999999999999999999999999876544
Q ss_pred --CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh-h---------------------------
Q 011349 207 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-L--------------------------- 256 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~-~--------------------------- 256 (488)
+.+..|..|.|||++.+..+...+||||+||++.||++|+..|++...- .
T Consensus 173 ~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv 252 (369)
T KOG0665|consen 173 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYV 252 (369)
T ss_pred ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHh
Confidence 3556789999999999988999999999999999999999888764110 0
Q ss_pred -----hhccccccccccccC-C--CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 257 -----IRGKNFLMLMDSCLE-G--HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 257 -----~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+.+.++.... . +.+......+.+++.+||..+|++|.|++++|.|
T Consensus 253 ~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 253 ENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000111111111111 0 1111234568899999999999999999999998
No 397
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=252.22 Aligned_cols=137 Identities=16% Similarity=0.205 Sum_probs=116.5
Q ss_pred HhcCCC--cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-----C---CCCccccc
Q 011349 49 ATSGFC--ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-----S---ERLVNLIG 117 (488)
Q Consensus 49 ~~~~~~--~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~ 117 (488)
...-|. .|.++++||.|.|++||++. ..+.+.||+|+.+... .-.+....||++|++++ | .+||+|++
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD 149 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLD 149 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeec
Confidence 334454 78899999999999999999 5678889999987543 23456788999999994 2 36999999
Q ss_pred ceec----CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec
Q 011349 118 CCCE----GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187 (488)
Q Consensus 118 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~ 187 (488)
.|.. +.++++|+|++ |.+|..+|....-+.++...+..|+.||+.||.|||+...|||-||||+|||+.
T Consensus 150 ~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 150 HFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred cceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 9965 46899999999 799999998766678999999999999999999999986699999999999993
No 398
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-32 Score=249.94 Aligned_cols=252 Identities=19% Similarity=0.203 Sum_probs=202.2
Q ss_pred cccccCCCCCCceEEEEEeCC------CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceec-CCeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE------DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCE-GEERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv 128 (488)
++.-.+-+|+||.||+|.+.+ .+.|-||.++....+- ...+..|...+..++|||+.++.+++.+ ...++++
T Consensus 287 ~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~ 366 (563)
T KOG1024|consen 287 RLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVL 366 (563)
T ss_pred echhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEE
Confidence 344456899999999997533 4457788887654332 3468899999999999999999999865 4578899
Q ss_pred EecCCCCChhhhhc-----c-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 129 AEFMPNETLSKHLF-----H-WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 129 ~e~~~~gsL~~~l~-----~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
+.++.-|+|..++. + ...+.++..+...++.|++.|+.|||+.+ |||.||-..|.+||+..++||+|=.+++.
T Consensus 367 y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRD 445 (563)
T KOG1024|consen 367 YPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRD 445 (563)
T ss_pred EeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccc
Confidence 99998899999997 2 13356888899999999999999999999 99999999999999999999999999997
Q ss_pred CCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 203 SRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 203 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
.-+.. .......||+||.+....|+.++|||||||+||||+|-...|..+. ........+....+-..|.
T Consensus 446 LFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI----DPfEm~~ylkdGyRlaQP~ 521 (563)
T KOG1024|consen 446 LFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI----DPFEMEHYLKDGYRLAQPF 521 (563)
T ss_pred cCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc----CHHHHHHHHhccceecCCC
Confidence 76543 2234578999999999999999999999999999998554444331 1122223333344445677
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.||+++..++..||...|++||+++++..-|......
T Consensus 522 NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 522 NCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999998876543
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=261.74 Aligned_cols=199 Identities=14% Similarity=0.175 Sum_probs=174.3
Q ss_pred HhcCCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC--------ChHHHHHHHHHHhhcC---CCCCcccc
Q 011349 49 ATSGFCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP--------DSRQFLEEARAVGLLR---SERLVNLI 116 (488)
Q Consensus 49 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---h~niv~~~ 116 (488)
.-++|++|..++++|.|+||.|++|.++ +...|+||.+.+...- ....+-.|+.+|..++ |+||++++
T Consensus 556 ~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 556 EYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred eecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhh
Confidence 3467889999999999999999999954 4667999998765421 1224678999999996 99999999
Q ss_pred cceecCCeeeEEEecC-CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeec
Q 011349 117 GCCCEGEERLLVAEFM-PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195 (488)
Q Consensus 117 ~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 195 (488)
++|.+++.+||+||-. +|-+|.++|. ....+++.++.-|++||+.|+++||+.+ |||||||-+||.++.+|-+||+
T Consensus 636 dfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 636 DFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred heeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEEe
Confidence 9999999999999974 5678999997 4567999999999999999999999999 9999999999999999999999
Q ss_pred cCCCcccCCCC--CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCC
Q 011349 196 CFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPP 250 (488)
Q Consensus 196 Dfgla~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~ 250 (488)
|||.+.....+ ..+.||..|.|||++.|.+| ...-|||++|++||.++....|++
T Consensus 713 dfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 713 DFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99998876554 57899999999999999876 567999999999999999888765
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=1.1e-30 Score=237.54 Aligned_cols=207 Identities=27% Similarity=0.378 Sum_probs=183.4
Q ss_pred CCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhh
Q 011349 62 HGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139 (488)
Q Consensus 62 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 139 (488)
||.|++|.||++... +++.++||++...... ....+.+|++.++.++|++|+++++++......+++||++.|++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 589999999999964 4889999999866532 24679999999999999999999999999899999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCcccCCCC----CccccccC
Q 011349 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG----KSYSTNLA 214 (488)
Q Consensus 140 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~----~~~~~t~~ 214 (488)
++... ...+++..+..++.+++.+|.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ....+...
T Consensus 81 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKEN-EGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 98632 146899999999999999999999999 999999999999998 899999999998866543 23456789
Q ss_pred CCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 215 FTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 215 y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
|++||.+... ..+.++|+|++|+++++| ..+.+++.+|+..+
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 9999999876 788999999999999998 46899999999999
Q ss_pred CCCCCCHHHHHHHh
Q 011349 294 PRERPNAKSLVASL 307 (488)
Q Consensus 294 p~~Rps~~~il~~l 307 (488)
|.+||++.++++++
T Consensus 202 p~~R~~~~~l~~~~ 215 (215)
T cd00180 202 PEKRPSAKEILEHL 215 (215)
T ss_pred cccCcCHHHHhhCC
Confidence 99999999998764
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-31 Score=233.51 Aligned_cols=245 Identities=19% Similarity=0.207 Sum_probs=186.0
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccc-eecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGC-CCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~-~~~~~~~~lv~e~~ 132 (488)
|+|.+.||+|.||.+-++.++ +.+.+++|-+.... ...++|.+|..---.| .|.||+.-|++ |...+..++++||+
T Consensus 26 y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~a 104 (378)
T KOG1345|consen 26 YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFA 104 (378)
T ss_pred hhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccC
Confidence 477888999999999999954 57789999987654 4578899999887777 48999988775 45567788999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec--CCCCCeeccCCCcccCCCCCcc-
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDGKSY- 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~~~- 209 (488)
+.|+|..-+. ...+.+.-..+++.|++.||.|+|+++ +||||||.+||||- +..++||||||+.+.....-..
T Consensus 105 P~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~ 180 (378)
T KOG1345|consen 105 PRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYL 180 (378)
T ss_pred ccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehhh
Confidence 9999999884 455889999999999999999999999 99999999999993 4458999999998766544322
Q ss_pred ccccCCCCccccccC-----CcccCCceEeehHHHHHHhhCCCCCCcchhhh---hhccccccccccccCCCCChhhHHH
Q 011349 210 STNLAFTPPEYLRTG-----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDL---IRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~-----~~~~~sDv~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..+..|.+||.+... ...+.+|||.||++++.++||..|+....... +....+..-....++..+. ..++.
T Consensus 181 ~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~-~fs~~ 259 (378)
T KOG1345|consen 181 EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFN-PFSEK 259 (378)
T ss_pred hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhc-ccCHH
Confidence 336789999987542 35789999999999999999998876432211 1111111111112222222 23466
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+..+..+-|..+|++|--..++.+.
T Consensus 260 a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 260 ALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred HHHHHHHhcCCcccccchhHHHHHH
Confidence 8889999999999999544444443
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=1.6e-30 Score=242.93 Aligned_cols=244 Identities=23% Similarity=0.334 Sum_probs=191.2
Q ss_pred cccccccCCCCCCceEEEEEe-C---CCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-D---EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+.++.+||.|+|++||++.. . .++.||+|.+.... ....+.+|+++|..+. +.||+++.+++..++...+|+
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 457788899999999999993 3 46789999997654 4567999999999995 999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCcccCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSR---- 204 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~---- 204 (488)
||++...-.+++. .++...+..+++.++.||.++|.+| ||||||||+|+|.+ ..++-.|+|||+|....
T Consensus 115 p~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 115 PYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred cccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 9999988888874 3778999999999999999999999 99999999999997 45678999999986110
Q ss_pred -------------C--C-----------------------------CccccccCCCCcccccc-CCcccCCceEeehHHH
Q 011349 205 -------------D--G-----------------------------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLL 239 (488)
Q Consensus 205 -------------~--~-----------------------------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il 239 (488)
. + -...||++|.|||++.. ...++++||||-|||+
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 0 0 01247899999999876 5678999999999999
Q ss_pred HHHhhCCCCCCcchhhh--------------------hhcc-------c----------cccc-cccccC--------CC
Q 011349 240 LDLLSGKHIPPSHALDL--------------------IRGK-------N----------FLML-MDSCLE--------GH 273 (488)
Q Consensus 240 ~el~tg~~p~~~~~~~~--------------------~~~~-------~----------~~~~-~~~~~~--------~~ 273 (488)
+-+++++.||.....+. ..+. . +..+ ...+.. ..
T Consensus 269 Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~ 348 (418)
T KOG1167|consen 269 LSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI 348 (418)
T ss_pred ehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence 99999999985431110 0001 0 0000 011111 11
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+..+.+++.+|+..||.+|.|+++.|.|
T Consensus 349 ~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 349 GSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 112234578999999999999999999999987
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1e-29 Score=234.17 Aligned_cols=192 Identities=24% Similarity=0.284 Sum_probs=170.0
Q ss_pred cccccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.||.|++|.||++.... ++.+|+|.+...... ..+.+.+|++.++.++|+|++++++++......++++|++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~ 81 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG 81 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence 455678999999999999654 889999999876544 567899999999999999999999999888999999999999
Q ss_pred CChhhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Cc
Q 011349 135 ETLSKHLFHWENQP-MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 208 (488)
Q Consensus 135 gsL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 208 (488)
++|.+++.. ... +++..+..++.+++.+|.+||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (225)
T smart00221 82 GDLFDYLRK--KGGKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT 158 (225)
T ss_pred CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence 999999863 233 899999999999999999999998 999999999999999999999999998876554 34
Q ss_pred cccccCCCCcccc-ccCCcccCCceEeehHHHHHHhhCCCCCCc
Q 011349 209 YSTNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLSGKHIPPS 251 (488)
Q Consensus 209 ~~~t~~y~aPE~~-~~~~~~~~sDv~slG~il~el~tg~~p~~~ 251 (488)
..++..|++||.+ ....++.++|||+||+++++|++|+.||+.
T Consensus 159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 5677889999998 667788899999999999999999998855
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=2.3e-29 Score=272.89 Aligned_cols=192 Identities=15% Similarity=0.144 Sum_probs=142.2
Q ss_pred hcCC-CCCcccccce-------ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc
Q 011349 106 LLRS-ERLVNLIGCC-------CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177 (488)
Q Consensus 106 ~l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~ 177 (488)
.++| +||++++++| .+...+++++|++ +++|.++|.. ....+++.+++.++.||+.||.|||+++ |+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eeec
Confidence 4455 5788888877 2334577889988 5799999964 3456999999999999999999999999 9999
Q ss_pred cccCCceeec-------------------CCCCCeeccCCCcccCCCC--------------------CccccccCCCCc
Q 011349 178 DLNTYRILFD-------------------QDGNPRLSCFGLMKNSRDG--------------------KSYSTNLAFTPP 218 (488)
Q Consensus 178 Dlkp~Nill~-------------------~~~~~kl~Dfgla~~~~~~--------------------~~~~~t~~y~aP 218 (488)
||||+||||+ .++.+|++|||+++..... ....||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 9999999994 3556778888887642110 013468889999
Q ss_pred cccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC
Q 011349 219 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298 (488)
Q Consensus 219 E~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 298 (488)
|++.+..++.++|||||||+||||++|.+|+...... .... .....+ ... ....+....++.+||..+|.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~-~~~~-~~~~~~----~~~-~~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT-MSSL-RHRVLP----PQI-LLNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH-HHHH-HHhhcC----hhh-hhcCHHHHHHHHHhCCCChhhCc
Confidence 9999999999999999999999999988765432111 0000 000111 111 11134567889999999999999
Q ss_pred CHHHHHHHh
Q 011349 299 NAKSLVASL 307 (488)
Q Consensus 299 s~~~il~~l 307 (488)
++.+++++-
T Consensus 258 s~~eil~h~ 266 (793)
T PLN00181 258 SMSELLQSE 266 (793)
T ss_pred ChHHHhhch
Confidence 999999873
No 405
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2e-29 Score=222.19 Aligned_cols=254 Identities=20% Similarity=0.282 Sum_probs=204.5
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
++++-+++.+|.....|..|+|+++.+. +++|+++.... ...++|..|.-.|+-+.||||+.+++.|..+.++.++.
T Consensus 188 d~~~lnl~tkl~e~hsgelwrgrwqgnd-ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 188 DVSSLNLITKLAESHSGELWRGRWQGND-IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS 266 (448)
T ss_pred chhhhhhhhhhccCCCcccccccccCcc-hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence 3455567778899999999999996655 66788765432 23568999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc-cccCCceeecCCCCCeeccCCCcccCCCCCc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKS 208 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~-Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 208 (488)
.||+.|||+..++...+-.++..++.+++.+|++|++|||+..|++.| -|....|++|++.+++|+ .+-++...+...
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~g 345 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVG 345 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccc
Confidence 999999999999876677788999999999999999999999878877 899999999999988874 233333333334
Q ss_pred cccccCCCCccccccCCc---ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRV---IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~---~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....|.||+||.++..+- -.++|+|||.+++||+.|...||.....-... ..+--..++..+|+..+..+.+|
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg----mkialeglrv~ippgis~hm~kl 421 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG----MKIALEGLRVHIPPGISRHMNKL 421 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh----hhhhhccccccCCCCccHHHHHH
Confidence 455789999999987553 34799999999999999999988654221111 11222334556777888999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 286 ASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
+.-|+..||.+||.+..|+-.|++++
T Consensus 422 m~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 422 MNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHhcCCCCcCCCcceehhhHHHhc
Confidence 99999999999999999999888764
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=4.3e-28 Score=214.93 Aligned_cols=168 Identities=18% Similarity=0.126 Sum_probs=128.2
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccccC
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 214 (488)
|||.+++.. .+..+++.+++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||+++...... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 689999864 3456999999999999999999999987 999999999999999 99988665433 368899
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc-cC-CCCChhhHH--HHHHHHHHhc
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC-LE-GHFSNDDGT--ELVRLASRCL 290 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~--~l~~li~~cl 290 (488)
|||||++.+..++.++|||||||++|||+||+.|+............+....... .. ...+...+. .+.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 9999999999999999999999999999999988754311100000000000000 00 011122333 6999999999
Q ss_pred cCCCCCCCCHHHHHHHhchhhcc
Q 011349 291 QYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
..+|.+||++.+++.++..+..+
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred hcccccccCHHHHHHHHHHHHHH
Confidence 99999999999999998766543
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-26 Score=223.20 Aligned_cols=257 Identities=15% Similarity=0.117 Sum_probs=199.6
Q ss_pred cccccccCCCCCCceEEEEEeCCC--cEEEEEEccCCCCCChHHHHHHHHHHhhcCC----CCCcccccce-ecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDED--RWIAVKRFNRSAWPDSRQFLEEARAVGLLRS----ERLVNLIGCC-CEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~-~~~~~~~l 127 (488)
.+.+.++||+|+||.||+|..... ..+|+|............+..|+.++..+.. +++..+++.+ ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 578899999999999999995443 4789998876543333378899999999973 6899999998 47778999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-----CCCeeccCCCcc-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-----GNPRLSCFGLMK- 201 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-----~~~kl~Dfgla~- 201 (488)
||+.+ |.+|.++......+.++..+++.|+.|++.+|.+||+.| ++||||||+|++++.. ..+.|.|||+++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 99999 899999886545578999999999999999999999999 9999999999999855 358999999998
Q ss_pred -cCCC------------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc
Q 011349 202 -NSRD------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 202 -~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 268 (488)
.... ...+.||..|+++..+.+...+++.|+||++.++.|++.|..|+........ ...+......
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~~ 255 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPRK 255 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhhh
Confidence 3211 1134589999999999999999999999999999999999977644321100 1111111111
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..........+.++..+...+-..+...+|....+...|+......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 256 LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 1111122334577888888888899999999999999988776654
No 408
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2.7e-27 Score=205.39 Aligned_cols=265 Identities=15% Similarity=0.144 Sum_probs=209.4
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccce
Q 011349 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCC 119 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 119 (488)
+.+++..++ .|.++++||+|+||.+|.|. ..+|..||||+-+... ...++..|.++.+.|+ ...|+.+..++
T Consensus 7 s~~~~iv~g----ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~ 80 (341)
T KOG1163|consen 7 SLEELIVGG----KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYG 80 (341)
T ss_pred chhhheecc----ceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhc
Confidence 445555444 47899999999999999999 7789999999976544 3357889999999996 57899999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeecc
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSC 196 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~D 196 (488)
.+...-.+||+++ |.||++++.- ..+.++..+++-++-|++.-+.|+|.++ +|||||||+|+|..-+ ..+.|+|
T Consensus 81 ~e~~ynvlVMdLL-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 81 TEKDYNVLVMDLL-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred cccccceeeeecc-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEe
Confidence 9999999999999 8999998753 5677999999999999999999999999 9999999999999743 4578999
Q ss_pred CCCcccCCC-----------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh--hhhccccc
Q 011349 197 FGLMKNSRD-----------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD--LIRGKNFL 263 (488)
Q Consensus 197 fgla~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~ 263 (488)
||+++...+ .....||..|.+-..+.+...+.+.|+-|+|.+|..+.-|..||.+-... ....+.+.
T Consensus 158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~ 237 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKIS 237 (341)
T ss_pred ccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHH
Confidence 999986643 23567899999998888888899999999999999999999887664221 11111121
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
+..-...........|.++...+..|-..--++-|...-+.+.+.-+.....
T Consensus 238 EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln 289 (341)
T KOG1163|consen 238 EKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN 289 (341)
T ss_pred HhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence 1111111222344567889999999999999999999888887776655443
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=9.1e-27 Score=211.01 Aligned_cols=254 Identities=16% Similarity=0.166 Sum_probs=204.2
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++.++||+|+||+.+.|+ +-++++||||.-...+ ...++.-|.+..+.| ..++|+..+-+...+-.-.||||++
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 4788999999999999999 7789999999876543 346788888888888 4799999999888888899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-----CCCeeccCCCcccCCCC--
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-----GNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-----~~~kl~Dfgla~~~~~~-- 206 (488)
|.||+|++ ...++.|+..++..++.|++.-++|+|++. +|.|||||+|+||+.- ..+.++|||+|+.+.+.
T Consensus 107 GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 107 GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 89999977 457888999999999999999999999999 9999999999999743 35789999999976543
Q ss_pred ---------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh--hccccccccccccCCCCC
Q 011349 207 ---------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--RGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 207 ---------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 275 (488)
.+..||.+||+-....|...+.+.|+-|||-++...+-|..||.+-..+.. ..+.+.+...........
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc 264 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLC 264 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHH
Confidence 356789999999999999999999999999999999999998876422211 111111111111111223
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...|.++..-+...-..+-.+-|..+-+...+..+....
T Consensus 265 ~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 265 EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 345778888888888888899999988888777665543
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=1.5e-25 Score=216.85 Aligned_cols=164 Identities=18% Similarity=0.076 Sum_probs=126.6
Q ss_pred ccccccCCCCCCceEEEEEeC--CCcEEEEEEccCCCC-----CChHHHHHHHHHHhhcCCCCCcc-cccceecCCeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD--EDRWIAVKRFNRSAW-----PDSRQFLEEARAVGLLRSERLVN-LIGCCCEGEERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~l 127 (488)
|.+.+.||+|+||+||+|.+. +++.||||++..... ...+.|.+|+++|++++|+|++. ++++ +..++
T Consensus 20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~L 95 (365)
T PRK09188 20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGL 95 (365)
T ss_pred ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEE
Confidence 567788899999999999853 577789998753311 12456899999999999999985 4432 45799
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc-cCCceeecCCCCCeeccCCCcccCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL-NTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dl-kp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
||||++|++|.. +. .. . ...++.+++.+|.|||+.| |+|||| ||+|||++.++.+||+|||+++.....
T Consensus 96 VmE~~~G~~L~~-~~--~~---~---~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 96 VRGWTEGVPLHL-AR--PH---G---DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRR 165 (365)
T ss_pred EEEccCCCCHHH-hC--cc---c---hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceecccC
Confidence 999999999963 21 11 1 1467899999999999999 999999 999999999999999999999865433
Q ss_pred C------------ccccccCCCCccccccC------CcccCCceE
Q 011349 207 K------------SYSTNLAFTPPEYLRTG------RVIPESVVY 233 (488)
Q Consensus 207 ~------------~~~~t~~y~aPE~~~~~------~~~~~sDv~ 233 (488)
. ...+++.|++||.+.-. ..+..+|-|
T Consensus 166 ~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 166 GALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred cchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 2 23457789999998642 234456766
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=1.2e-23 Score=205.05 Aligned_cols=248 Identities=23% Similarity=0.270 Sum_probs=193.2
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCC-CCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSE-RLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.+...||.|+||.||++... ..+++|.+....... ...+.+|+.+++.+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 456678899999999999875 779999998665333 56799999999999988 799999999777778999999
Q ss_pred CCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCC----
Q 011349 132 MPNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~---- 205 (488)
+.++++.+++..... ..++......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||+++....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999977753111 26999999999999999999999999 99999999999999888 799999999875432
Q ss_pred ------CCccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhh---hhhccccccccccccCCC
Q 011349 206 ------GKSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD---LIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 206 ------~~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 273 (488)
.....+|..|++||.+.+ ...+...|+||+|++++++++|..|+...... ......+.....+.....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence 245578999999999987 57888999999999999999999885543210 000000111110001111
Q ss_pred CCh----hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 274 FSN----DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 274 ~~~----~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... .....+.+++..|+..+|..|.+.......
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111 113578899999999999999988887765
No 412
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=4.6e-24 Score=190.14 Aligned_cols=140 Identities=16% Similarity=0.145 Sum_probs=110.7
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--C-------hH-----------------HHHHHHHHHhhcCCCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--D-------SR-----------------QFLEEARAVGLLRSERL 112 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~-----------------~~~~E~~~l~~l~h~ni 112 (488)
.+.||+|+||.||+|...+|+.||||+++..... . .. ...+|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4678999999999999778999999999764321 1 01 22359999999988887
Q ss_pred cccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCcccccccCCceeecCCCC
Q 011349 113 VNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 113 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
.....+.. ...+|||||++|+++...+. ....++...+..++.|++.+|.++ |+.+ |+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCc
Confidence 54333222 23489999999877765432 345799999999999999999999 6888 99999999999998 578
Q ss_pred CeeccCCCcccCC
Q 011349 192 PRLSCFGLMKNSR 204 (488)
Q Consensus 192 ~kl~Dfgla~~~~ 204 (488)
++|+|||++....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999987543
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=6e-24 Score=191.24 Aligned_cols=168 Identities=12% Similarity=0.047 Sum_probs=131.6
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHH---------HHHHHHHHhhcCCCCCcccccceecC---
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQ---------FLEEARAVGLLRSERLVNLIGCCCEG--- 122 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~~~~~~~~~--- 122 (488)
.+++++.+|.|+||.||+... ++..+|||.+.......... +.+|+..+.++.|++|..+.+++...
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~ 110 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERK 110 (232)
T ss_pred ceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccc
Confidence 468888999999999999665 56679999998655433332 68999999999999999998886543
Q ss_pred -----CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 123 -----EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 123 -----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
+..+|||||++|.+|.++.. ++. ....+++.+|..+|+.| ++|||+||+||+++.+| ++|+||
T Consensus 111 ~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 111 TLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred cccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEEC
Confidence 35789999999999987642 333 24569999999999999 99999999999999888 999999
Q ss_pred CCcccCCCCCccccccCCCCccccccCCcccCCceEeehHHHHHHh
Q 011349 198 GLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243 (488)
Q Consensus 198 gla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~ 243 (488)
|..+........ ..+.....+..++|+||||+++.-+.
T Consensus 179 g~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 987655322111 01333455677999999999887653
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=1.5e-24 Score=223.61 Aligned_cols=242 Identities=16% Similarity=0.107 Sum_probs=183.0
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEccCC--CCCChH----HHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 59 VSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRS--AWPDSR----QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...+|.|++|.|+.+. .......+.|.+... ...... .+..|+.+-..++|+|++..+..+.+.....-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 4457999999887776 333444555544311 111111 266788888899999999988888777766667999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
|++ +|..++. ....++...+-.++.|++.|+.|+|+.| +.|||+||+|++++.+|.+||+|||.+......
T Consensus 403 ~~~-Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 403 CPY-DLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred ccH-HHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 998 9999996 3357899999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccccCCCCccccccCCccc-CCceEeehHHHHHHhhCCCCCCcchhhhhh-----ccccccccccccCCCCChh
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIP-ESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----GKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~-~sDv~slG~il~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 277 (488)
....|+..|+|||.+.+..|.+ ..||||.|+++..|++|+.||......... ........ .-.......
T Consensus 479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 556 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIF--EGPNRLLSL 556 (601)
T ss_pred hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccc--cChHHHHHh
Confidence 2457889999999999999976 699999999999999999877543221110 00000000 000112234
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+...+.++.+||+.+|.+|.|+++|++.
T Consensus 557 lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 557 LPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred chhhHHHHHHHHccCChhheecHHHHhhC
Confidence 57788999999999999999999999975
No 415
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.89 E-value=8.9e-23 Score=182.62 Aligned_cols=142 Identities=17% Similarity=0.176 Sum_probs=113.2
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC---------------------C-----hHHHHHHHHHHhhcCCCC
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP---------------------D-----SRQFLEEARAVGLLRSER 111 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~n 111 (488)
+.+.||+|+||.||+|...+|+.||||+++..... . ...+.+|...+.++.|++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35678999999999999768999999999865311 0 112467899999999998
Q ss_pred CcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCC
Q 011349 112 LVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDG 190 (488)
Q Consensus 112 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~ 190 (488)
+.....+... ..+|||||++|+++..... ....++......++.|++.++.++|+ .| |+||||||+||+++ ++
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~ 154 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CC
Confidence 7554444332 2489999999876544322 33568888999999999999999999 88 99999999999999 88
Q ss_pred CCeeccCCCcccCCC
Q 011349 191 NPRLSCFGLMKNSRD 205 (488)
Q Consensus 191 ~~kl~Dfgla~~~~~ 205 (488)
.++|+|||++.....
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999986644
No 416
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1e-23 Score=207.31 Aligned_cols=224 Identities=20% Similarity=0.234 Sum_probs=186.4
Q ss_pred CCCCCCceEEEEE----eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCCC
Q 011349 62 HGEKAPNVVYKGL----VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 62 lG~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+|+|+||.|+++. .+.|..+|+|++++..... ......|..++..++ ||.+|++.-.+..+...++++++..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6999999999876 3347789999987644221 114456788888886 99999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccccC
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 214 (488)
|.|...+. ....++......+...++-++.++|+.+ ++|||+|++||+++.+|++++.|||+++........+||..
T Consensus 82 g~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 82 GDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred chhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 99998886 4566888888899999999999999999 99999999999999999999999999998777666699999
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|||||.+. ....++|.||||++++||+||..||.......+ +. .....|......+.+++..++..+|
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~I--------l~--~~~~~p~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRI--------LK--AELEMPRELSAEARSLFRQLFKRNP 226 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHH--------hh--hccCCchhhhHHHHHHHHHHHhhCH
Confidence 99999998 467789999999999999999988866211111 11 1234566778889999999999999
Q ss_pred CCCCCH
Q 011349 295 RERPNA 300 (488)
Q Consensus 295 ~~Rps~ 300 (488)
..|.-.
T Consensus 227 ~nrLg~ 232 (612)
T KOG0603|consen 227 ENRLGA 232 (612)
T ss_pred HHHhcc
Confidence 999543
No 417
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=4.1e-23 Score=212.96 Aligned_cols=243 Identities=18% Similarity=0.206 Sum_probs=180.3
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCC-CCChHHHHHHHHH--HhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSA-WPDSRQFLEEARA--VGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+....+.||++.|=.|.+|+++.|. |+||++-... .-..+.|.+.++- ...++|||++.+.-+-....-.|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4456678899999999999988888 9999986544 2334444444443 4444899999999888778888999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+. .+|+|.|. .+.-+..-+...|+.|++.||.-+|..| |+|||||.+||||+..+.+.|+||...+...-..
T Consensus 103 vk-hnLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 103 VK-HNLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred Hh-hhhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 96 79999996 4555777888999999999999999999 9999999999999999999999999876432111
Q ss_pred -------ccccccCCCCccccccC----------C-cccCCceEeehHHHHHHhhC-CCCCCcchhhhhhcccccccccc
Q 011349 208 -------SYSTNLAFTPPEYLRTG----------R-VIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~----------~-~~~~sDv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~ 268 (488)
+...-..|+|||.+... . .+++.||||+||+++||++- ++||.-...-.++... ......
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e~ 257 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPEQ 257 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHHH
Confidence 11223569999987531 1 67899999999999999886 5444322211122211 111111
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.+.. + ....++.++..|++.||++|.++++.|+.-
T Consensus 258 ~Le~-I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 258 LLEK-I---EDVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred HHHh-C---cCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 1111 1 123689999999999999999999999873
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=1.3e-21 Score=172.15 Aligned_cols=180 Identities=14% Similarity=0.097 Sum_probs=137.9
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC----hHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecC
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD----SRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+...|++|+||+||.+.. .+.+++.+.+.....-. ...+.+|+++|++|. |+++++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 455679999999997765 67778888887654311 125789999999995 5889999885 3469999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc-cCCceeecCCCCCeeccCCCcccCCCCCcc--
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL-NTYRILFDQDGNPRLSCFGLMKNSRDGKSY-- 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dl-kp~Nill~~~~~~kl~Dfgla~~~~~~~~~-- 209 (488)
.|.+|...+. . ....++.|++.+|.++|+.| |+|||| ||+|||++.++.++|+|||++.........
T Consensus 81 ~G~~L~~~~~---~------~~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 81 AGAAMYQRPP---R------GDLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred cCccHHhhhh---h------hhHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 9999875442 1 12357889999999999999 999999 799999999999999999999855433210
Q ss_pred ---------------ccccCCCCcccccc-CCcc-cCCceEeehHHHHHHhhCCCCCCcc
Q 011349 210 ---------------STNLAFTPPEYLRT-GRVI-PESVVYSFGTLLLDLLSGKHIPPSH 252 (488)
Q Consensus 210 ---------------~~t~~y~aPE~~~~-~~~~-~~sDv~slG~il~el~tg~~p~~~~ 252 (488)
..++.|++|+...- ...+ ...+.++-|+-+|.++|++.+...+
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 13567777765432 1233 4678899999999999999876543
No 419
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.86 E-value=5.2e-22 Score=195.52 Aligned_cols=209 Identities=20% Similarity=0.295 Sum_probs=163.9
Q ss_pred HhhcCCCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCc-ccccccCC
Q 011349 104 VGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRA-LYHDLNTY 182 (488)
Q Consensus 104 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~i-iH~Dlkp~ 182 (488)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.-...++++|+.||.|||... | .|+.++++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP-IGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc-ceeeeeeccc
Confidence 4678999999999999999999999999999999999975 4567999999999999999999999986 5 99999999
Q ss_pred ceeecCCCCCeeccCCCcccCCCC------CccccccCCCCccccccC-------CcccCCceEeehHHHHHHhhCCCCC
Q 011349 183 RILFDQDGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTG-------RVIPESVVYSFGTLLLDLLSGKHIP 249 (488)
Q Consensus 183 Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~-------~~~~~sDv~slG~il~el~tg~~p~ 249 (488)
|.++|..+.+||+|||+....... ........|.|||.+++. ..+.+.||||||++++|+++.+.||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 999999999999999998766421 112234679999999863 1467899999999999999999988
Q ss_pred Ccchhhhhhccccccc---cccccCCCCC-h-hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 250 PSHALDLIRGKNFLML---MDSCLEGHFS-N-DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 250 ~~~~~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..........+....+ .....++... . ..++++..++.+||..+|..||+++.+-..++.+.+..
T Consensus 159 ~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred ccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 6532211111111111 1111222221 1 34557999999999999999999999999988777653
No 420
>KOG0553 consensus TPR repeat-containing protein [General function prediction only]
Probab=99.85 E-value=2.7e-21 Score=174.25 Aligned_cols=107 Identities=21% Similarity=0.325 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
....|+.++.+|+.+++.++|++|+..|++||+++|+ ++.+|.|||.+|.++|+|+.|+++|+.||.+||.+.++|-++
T Consensus 77 ~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~RL 155 (304)
T KOG0553|consen 77 DKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGRL 155 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHHH
Confidence 4467899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|.+|+.+|++++|++.|++||++||++.
T Consensus 156 G~A~~~~gk~~~A~~aykKaLeldP~Ne 183 (304)
T KOG0553|consen 156 GLAYLALGKYEEAIEAYKKALELDPDNE 183 (304)
T ss_pred HHHHHccCcHHHHHHHHHhhhccCCCcH
Confidence 9999999999999999999999999874
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.85 E-value=3.8e-21 Score=172.83 Aligned_cols=133 Identities=15% Similarity=0.092 Sum_probs=105.5
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-----CCCCCcccccceecCC---eee-EEEe
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-----RSERLVNLIGCCCEGE---ERL-LVAE 130 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~---~~~-lv~e 130 (488)
..||+|+||.||. ..+++. .+||++........+.+.+|+.+++.+ .||||++++|++.++. ..+ +|||
T Consensus 8 ~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 8 SPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred ceecCCCceEEEE-CCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 3569999999995 323444 479998776545567899999999999 5799999999998763 333 7899
Q ss_pred c--CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCcccccccCCceeecC----CCCCeeccCCCc
Q 011349 131 F--MPNETLSKHLFHWENQPMKWAMRVRVALYLAQAL-DYCSSKGRALYHDLNTYRILFDQ----DGNPRLSCFGLM 200 (488)
Q Consensus 131 ~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla 200 (488)
| +++++|.+++.. ..+++. ..++.+++.++ .|||+++ |+||||||+|||++. ++.++|+||+.+
T Consensus 86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 9 567999999953 346655 36678888888 9999999 999999999999973 347999995544
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.84 E-value=1.4e-21 Score=181.20 Aligned_cols=227 Identities=20% Similarity=0.200 Sum_probs=146.6
Q ss_pred cccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCC----------CCCcccccceec---
Q 011349 59 VSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRS----------ERLVNLIGCCCE--- 121 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h----------~niv~~~~~~~~--- 121 (488)
.+.||.|+++.||.+.+ .+++.+|||++..... ...+++.+|.-....+.+ -.++--++...-
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 35689999999999995 4689999999865442 234567777655555322 122222222211
Q ss_pred ------C---C-----eeeEEEecCCCCChhhhhcc---CCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCC
Q 011349 122 ------G---E-----ERLLVAEFMPNETLSKHLFH---WEN--QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182 (488)
Q Consensus 122 ------~---~-----~~~lv~e~~~~gsL~~~l~~---~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~ 182 (488)
. . +.+++|+-+. ++|.+++.- ... ..+....++.+..|+++.+++||+.| ++|+||||+
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~~~ 174 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDIKPE 174 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGG
T ss_pred CcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEeccccee
Confidence 1 1 2467888885 788887642 111 12334456677799999999999999 999999999
Q ss_pred ceeecCCCCCeeccCCCcccCCCCCc-cccccCCCCcccccc--------CCcccCCceEeehHHHHHHhhCCCCCCcch
Q 011349 183 RILFDQDGNPRLSCFGLMKNSRDGKS-YSTNLAFTPPEYLRT--------GRVIPESVVYSFGTLLLDLLSGKHIPPSHA 253 (488)
Q Consensus 183 Nill~~~~~~kl~Dfgla~~~~~~~~-~~~t~~y~aPE~~~~--------~~~~~~sDv~slG~il~el~tg~~p~~~~~ 253 (488)
|++++.+|.++|+||+.......... ...+..|.+||.... -.++.+.|.|+||+++|.|++|..|+....
T Consensus 175 nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~ 254 (288)
T PF14531_consen 175 NFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSS 254 (288)
T ss_dssp GEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCG
T ss_pred eEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCC
Confidence 99999999999999998766554333 344678999997743 247889999999999999999998876442
Q ss_pred hhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCC
Q 011349 254 LDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297 (488)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 297 (488)
....... .+ ..+. +.|..+..||..+|+.+|.+|
T Consensus 255 ~~~~~~~----~f-----~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 255 PEADPEW----DF-----SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GGSTSGG----GG-----TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccccccc----cc-----hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 2111111 11 1223 678899999999999999987
No 423
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.5e-20 Score=174.74 Aligned_cols=191 Identities=15% Similarity=0.171 Sum_probs=145.4
Q ss_pred CCCCCcccccceecC---------------------------CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHH
Q 011349 108 RSERLVNLIGCCCEG---------------------------EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALY 160 (488)
Q Consensus 108 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 160 (488)
+|||||++.++|.+. ..+|+||.-.+ .+|..++- ....+.....-|+.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHh---cCCCchHHHHHHHHH
Confidence 699999999988642 24789998886 79999984 455777788889999
Q ss_pred HHHHHHHHHhCCCcccccccCCceee--cCCCC--CeeccCCCcccCCC----------CCccccccCCCCccccccCC-
Q 011349 161 LAQALDYCSSKGRALYHDLNTYRILF--DQDGN--PRLSCFGLMKNSRD----------GKSYSTNLAFTPPEYLRTGR- 225 (488)
Q Consensus 161 i~~~l~~LH~~~~iiH~Dlkp~Nill--~~~~~--~kl~Dfgla~~~~~----------~~~~~~t~~y~aPE~~~~~~- 225 (488)
+++|+.|||.+| |.|||+|.+|||+ |+|+. +.|+|||.+--... .-...|+-..||||+....+
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 9999999999999 45553 68999997642221 11334567789999987522
Q ss_pred ----c-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCH
Q 011349 226 ----V-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 300 (488)
Q Consensus 226 ----~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 300 (488)
. -.++|.|+.|.+.||+++...||+....-...... ..+..-+..+..+++.+++++...|+.||++|++.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~----Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT----YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh----hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 1 24899999999999999999999874332222222 12222345667788999999999999999999987
Q ss_pred HHHHHHh
Q 011349 301 KSLVASL 307 (488)
Q Consensus 301 ~~il~~l 307 (488)
.-....|
T Consensus 505 ~iAANvl 511 (598)
T KOG4158|consen 505 NIAANVL 511 (598)
T ss_pred cHHHhHH
Confidence 7665554
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=5.9e-20 Score=169.32 Aligned_cols=158 Identities=16% Similarity=0.095 Sum_probs=119.0
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCceEEEEE--eCCCcEEEEEEccCCCCC-------------------C-----h
Q 011349 41 FNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL--VDEDRWIAVKRFNRSAWP-------------------D-----S 94 (488)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~-------------------~-----~ 94 (488)
.+..++....+.=..+.+.+.||+|+||.||+|. ..+|+.||||+++..... . .
T Consensus 15 ~~~~~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (237)
T smart00090 15 RTRLALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVR 94 (237)
T ss_pred HHHHHHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHH
Confidence 3444444444333356788899999999999998 568999999998754311 0 1
Q ss_pred HHHHHHHHHHhhcCCCC--CcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 011349 95 RQFLEEARAVGLLRSER--LVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG 172 (488)
Q Consensus 95 ~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 172 (488)
..+.+|+.++.++.+.+ ++++++. ...++||||++|++|..... ....+...+...++.||+.+|.+||+.+
T Consensus 95 ~~~~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g 168 (237)
T smart00090 95 LWAEKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEG 168 (237)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 23568999999997533 3444432 23589999999988876543 2345666778899999999999999997
Q ss_pred CcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 173 RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 173 ~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
+++||||||+||+++ ++.++|+|||.+.....
T Consensus 169 ~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 169 ELVHGDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred CEEeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 799999999999999 88999999999875443
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=1.5e-19 Score=165.00 Aligned_cols=134 Identities=18% Similarity=0.169 Sum_probs=113.7
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--------hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--------SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.||+|++|.||+|.. .|..|+||+........ ...+.+|+.++..+.|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4679999999999987 67779999876443221 13578899999999999988877777777888999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
++|++|.+++.. . .+ .+..++.+++.+|.++|+.+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~--~---~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINS--N---GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHh--c---cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999998852 1 12 88899999999999999999 99999999999999 78999999998764
No 426
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.80 E-value=2.1e-20 Score=180.73 Aligned_cols=168 Identities=23% Similarity=0.335 Sum_probs=128.0
Q ss_pred eeeEEEecCCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 124 ERLLVAEFMPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
.+||.|++|...+|.++|.+. .....++...+.++.|++.|+.| ++ .+|+|+||.||+...+..+||.|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheee
Confidence 478999999999999999743 34467888999999999999999 77 99999999999999999999999999765
Q ss_pred CCCCC----------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCC-CCCCcchhhhhhccccccccccccC
Q 011349 203 SRDGK----------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK-HIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 203 ~~~~~----------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
..... ...||..||+||.+.+..|+.++||||||++|+|+++-- ..+. ....+..+-+..+.
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-------r~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-------RIATLTDIRDGIIP 478 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH-------HHHhhhhhhcCCCC
Confidence 54332 356899999999999999999999999999999999731 1111 11111222222222
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHH
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 303 (488)
+.+-.+. +.-..|+.+++...|.+||++.+.
T Consensus 479 ~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 479 PEFLQDY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hHHhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 1121122 334689999999999999955444
No 427
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=1.6e-19 Score=190.01 Aligned_cols=240 Identities=16% Similarity=0.137 Sum_probs=175.3
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC---CCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR---SERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.+.|-+.+|+|+||.||+|...+|+.||+|+-++.+.= +|.-=.+++.+|+ -+-|..+..++.-.+.-+||+||
T Consensus 699 ~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey 775 (974)
T KOG1166|consen 699 KFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEY 775 (974)
T ss_pred eEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeec
Confidence 34677889999999999999778999999998765421 1222233444444 24566666666667788999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-------CCCCCeeccCCCcccCC
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-------QDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-------~~~~~kl~Dfgla~~~~ 204 (488)
.+.|||.+++. ..+.++|..+..++.|+++.+..||..+ |||+||||+|+||. +..-++|+|||-+-.+.
T Consensus 776 ~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 776 SPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred cccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 99999999997 5677999999999999999999999999 99999999999994 23458999999876443
Q ss_pred ---CCC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 205 ---DGK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 205 ---~~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
++. ...+|-.+-.+|+..|.+++...|.|.|.-+++-|+.|+..- ...+....+... ++...
T Consensus 853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------~~~g~~~~~~~~-----~~Ry~ 920 (974)
T KOG1166|consen 853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------VKNGSSWMVKTN-----FPRYW 920 (974)
T ss_pred EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------hcCCcceecccc-----chhhh
Confidence 332 335688899999999999999999999999999999998421 111111111111 11111
Q ss_pred -HHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 279 -GTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 279 -~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
-.-+-+++..+|..|-..=|...++...|+.+..
T Consensus 921 ~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 921 KRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred hHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence 1235567777777443333777777777766544
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.79 E-value=7.5e-19 Score=158.54 Aligned_cols=137 Identities=17% Similarity=0.142 Sum_probs=109.0
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC----------------------ChHHHHHHHHHHhhcCCCC--
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP----------------------DSRQFLEEARAVGLLRSER-- 111 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h~n-- 111 (488)
+.+.+.||+|+||.||++...+|+.||||++...... ....+.+|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 4667788999999999999878999999987653310 0113678999999998774
Q ss_pred CcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 112 LVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 112 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++..++ ....++||||++|++|..... ......++.+++.++.++|+.+ ++||||||+||+++.++.
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEcCCCc
Confidence 444443 234589999999999976542 1345678899999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCC
Q 011349 192 PRLSCFGLMKNSRD 205 (488)
Q Consensus 192 ~kl~Dfgla~~~~~ 205 (488)
++|+|||++.....
T Consensus 164 ~~liDfg~~~~~~~ 177 (198)
T cd05144 164 IYIIDWPQMVSTDH 177 (198)
T ss_pred EEEEECCccccCCC
Confidence 99999999865543
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.79 E-value=7.2e-19 Score=158.96 Aligned_cols=129 Identities=17% Similarity=0.192 Sum_probs=106.6
Q ss_pred CCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--------hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 62 HGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--------SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 62 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
||+|+||.||+|.+ +|..|++|......... ...+.+|++++..++|+++.....++......++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 69999999999985 67789999865433211 2457789999999998876665555666677899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
|++|.+.+.. .. . .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||+++.
T Consensus 81 g~~l~~~~~~--~~-~------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEE--GN-D------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhh--cH-H------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999988742 11 1 78999999999999999 99999999999999 88999999999865
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.77 E-value=2.2e-19 Score=185.48 Aligned_cols=200 Identities=19% Similarity=0.162 Sum_probs=143.4
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.|+.+..|++|-||.++++ +.+++|+ ++++.+ -+.+. ++.....|.+ |
T Consensus 85 f~~IklisngAygavylvrh~~trqrfa~-kiNkq~-----lilRn--ilt~a~npfv---------------v------ 135 (1205)
T KOG0606|consen 85 FNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN-----LILRN--ILTFAGNPFV---------------V------ 135 (1205)
T ss_pred cceeEeeccCCCCceeeeeccccccchhh-cccccc-----hhhhc--cccccCCcce---------------e------
Confidence 367888899999999999964 4677888 554333 11111 2222222222 2
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--------- 205 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--------- 205 (488)
|+-...++ .-++++... +.++.|||+.+ |+|||+||+|.+|+.-|++|+.|||+++....
T Consensus 136 gDc~tllk--~~g~lPvdm--------vla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg 204 (1205)
T KOG0606|consen 136 GDCATLLK--NIGPLPVDM--------VLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEG 204 (1205)
T ss_pred chhhhhcc--cCCCCcchh--------hHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhc
Confidence 44444454 223444333 67899999999 99999999999999999999999999764311
Q ss_pred ----------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 206 ----------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 206 ----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
....+||+.|+|||++..+.|...+|.|++|+|+||.+-|..||.++....+-...+...+ ...+-.
T Consensus 205 ~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i---~wpE~d 281 (1205)
T KOG0606|consen 205 HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI---EWPEED 281 (1205)
T ss_pred chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc---cccccC
Confidence 1234789999999999999999999999999999999999999988754443332222211 112223
Q ss_pred hhhHHHHHHHHHHhccCCCCCCC
Q 011349 276 NDDGTELVRLASRCLQYEPRERP 298 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rp 298 (488)
...++++++++.++|+.+|..|-
T Consensus 282 ea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 282 EALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cCCCHHHHHHHHHHHHhChHhhc
Confidence 34568899999999999999993
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.76 E-value=3.1e-18 Score=177.63 Aligned_cols=133 Identities=20% Similarity=0.179 Sum_probs=108.1
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEc-cCC-CCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRF-NRS-AWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~-~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..+.||+|+||+||+|.+.... +++|+. ... ... ..+.+.+|++++..++|++++....++......++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 3567799999999999875544 444432 211 111 1246889999999999999998877777777889999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
||++|++|.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ +++.++|+|||+++..
T Consensus 416 E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 416 EYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999998873 45778999999999999999 9999999999999 5789999999998753
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.73 E-value=2e-17 Score=148.00 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=99.8
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHH----------------------HHHHHHHHhhcCCCC--C
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQ----------------------FLEEARAVGLLRSER--L 112 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--i 112 (488)
.+.||+|+||.||+|...+++.||||+++...... ... ...|...+.++.+.+ +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 45789999999999997789999999987543211 111 135666666664433 4
Q ss_pred cccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCC
Q 011349 113 VNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 113 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++.+++ ...++||||++|+++..... ...... .....++.+++.++.++|. .+ ++|+||||+||+++ ++.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l--~~~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRL--KDVRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhh--hhhhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEEE-CCc
Confidence 444433 24589999999855432111 111111 6778999999999999999 88 99999999999999 899
Q ss_pred CeeccCCCcccCCC
Q 011349 192 PRLSCFGLMKNSRD 205 (488)
Q Consensus 192 ~kl~Dfgla~~~~~ 205 (488)
++|+|||.+.....
T Consensus 153 ~~liDfg~a~~~~~ 166 (187)
T cd05119 153 VYIIDVPQAVEIDH 166 (187)
T ss_pred EEEEECcccccccC
Confidence 99999999975543
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.73 E-value=1.6e-17 Score=142.90 Aligned_cols=135 Identities=16% Similarity=0.025 Sum_probs=114.2
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC--CCCcccccceecCCeeeEEEecCCCC
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS--ERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
+++.+|.|.++.||++...+ ..++||....... ...+.+|+.+++.++| .++++++++....+..+++|||++|+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35678999999999999755 6799999876542 4679999999999976 58999998888778899999999987
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK---GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++..+ +......++.+++.+|.++|.. + ++|+|++|.||+++..+.++++|||.+.....
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~-i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLV-LCHGDLHPGNILVDDGKILGIIDWEYAGYGPP 141 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceE-EEecCCCcceEEEECCcEEEEEecccccCCCh
Confidence 77543 5667788899999999999985 5 99999999999999989999999999875443
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.71 E-value=7.1e-17 Score=149.14 Aligned_cols=133 Identities=18% Similarity=0.157 Sum_probs=103.0
Q ss_pred CC-CCCCceEEEEEeCCCcEEEEEEccCCCC-------------CChHHHHHHHHHHhhcCCCCC--cccccceecCC--
Q 011349 62 HG-EKAPNVVYKGLVDEDRWIAVKRFNRSAW-------------PDSRQFLEEARAVGLLRSERL--VNLIGCCCEGE-- 123 (488)
Q Consensus 62 lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~~-- 123 (488)
|| .|+.|+||.+... +..++||.+..... .....+.+|+.++.++.|++| +..+++.....
T Consensus 39 lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~ 117 (239)
T PRK01723 39 VGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL 117 (239)
T ss_pred eecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc
Confidence 46 7788889988874 66699998854221 123468899999999998885 66676644322
Q ss_pred --eeeEEEecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 124 --ERLLVAEFMPN-ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 124 --~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
..++|||+++| .+|.+++. ..+++.. .+.+|+.+|.+||+.| |+||||||.|||++.++.++|+|||.+
T Consensus 118 ~~~~~lV~e~l~G~~~L~~~l~---~~~l~~~----~~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 118 FYRADILIERIEGARDLVALLQ---EAPLSEE----QWQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred ceeeeEEEEecCCCCCHHHHHh---cCCCCHH----HHHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 23599999997 68988874 3345544 3578999999999999 999999999999998899999999998
Q ss_pred ccC
Q 011349 201 KNS 203 (488)
Q Consensus 201 ~~~ 203 (488)
...
T Consensus 190 ~~~ 192 (239)
T PRK01723 190 ELR 192 (239)
T ss_pred ccC
Confidence 754
No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=3.4e-18 Score=176.60 Aligned_cols=250 Identities=17% Similarity=0.133 Sum_probs=190.6
Q ss_pred CCcccccccCCCCCCceEEEEEe--CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV--DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 127 (488)
...+.+++.||+|+|+.|-.... .....+|+|.+.... .........|..+-..+. |+|++++++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 45567778899999999988874 334557777776543 122334556888888886 9999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccccccCCceeecCCC-CCeeccCCCcccCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS-SKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRD 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~ 205 (488)
+++|..|+++.+.+........+....-.++.|+..++.|+| ..+ +.|+|+||+|.+++..+ .++++|||+|.....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999883222225677788889999999999999 888 99999999999999999 999999999987665
Q ss_pred -CC------cccc-ccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC--CCC
Q 011349 206 -GK------SYST-NLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE--GHF 274 (488)
Q Consensus 206 -~~------~~~~-t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 274 (488)
.. ...| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+........ ........... ...
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~ 254 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG---RYSSWKSNKGRFTQLP 254 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---cceeecccccccccCc
Confidence 22 3467 9999999999874 457789999999999999999987654322211 11111111111 111
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.........+++.+++..+|..|.+.+++...
T Consensus 255 ~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 255 WNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cccCChhhhhcccccccCCchhcccccccccc
Confidence 22345667889999999999999999888765
No 436
>PRK15359 type III secretion system chaperone protein SscB; Provisional
Probab=99.68 E-value=3.2e-16 Score=133.07 Aligned_cols=103 Identities=13% Similarity=0.143 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..++..|..+++.|+|++|+..|++++.++|. +..+|.++|.++..+|++++|+..|++|++++|+++.+++++|.++
T Consensus 24 p~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l 102 (144)
T PRK15359 24 PETVYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCL 102 (144)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 345778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+|++++|++.|++|++++|++.
T Consensus 103 ~~~g~~~eAi~~~~~Al~~~p~~~ 126 (144)
T PRK15359 103 KMMGEPGLAREAFQTAIKMSYADA 126 (144)
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999864
No 437
>KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones]
Probab=99.68 E-value=1e-16 Score=154.62 Aligned_cols=103 Identities=25% Similarity=0.462 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..-+.+|+.+|+.|+|..|+..|++||+.+|+ ++.+|.|||.||.+++.+..|++|++++|+++|++.++|.++|.++
T Consensus 358 A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al 436 (539)
T KOG0548|consen 358 AEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAAL 436 (539)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 667788899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+.+|++|++.|.+++++||++.
T Consensus 437 ~~mk~ydkAleay~eale~dp~~~ 460 (539)
T KOG0548|consen 437 RAMKEYDKALEAYQEALELDPSNA 460 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhH
Confidence 999999999999999999999864
No 438
>KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=3.8e-16 Score=150.77 Aligned_cols=103 Identities=29% Similarity=0.494 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..+..+|++++..|||+.|+..|++||.++|. +..+|.||+.||..+|+|++|+++..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 456789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+|+|++|+..|.++|+.||+++
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~ 104 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNK 104 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchH
Confidence 999999999999999999999874
No 439
>KOG4234 consensus TPR repeat-containing protein [General function prediction only]
Probab=99.65 E-value=8.9e-16 Score=129.93 Aligned_cols=109 Identities=18% Similarity=0.256 Sum_probs=101.6
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT 453 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~ 453 (488)
.....+..++..|+.+|.+|+|++|...|+.||++.|.-. ..+|.|+|.|+++++.++.||.+|.+||+|+|.+.+
T Consensus 90 k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~k 169 (271)
T KOG4234|consen 90 KAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEK 169 (271)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHH
Confidence 3457788999999999999999999999999999998722 358999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 454 AFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 454 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|+.++|.+|.++.+|++|+++|++.+++||.++
T Consensus 170 Al~RRAeayek~ek~eealeDyKki~E~dPs~~ 202 (271)
T KOG4234|consen 170 ALERRAEAYEKMEKYEEALEDYKKILESDPSRR 202 (271)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchH
Confidence 999999999999999999999999999999864
No 440
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=1.1e-15 Score=151.07 Aligned_cols=241 Identities=22% Similarity=0.235 Sum_probs=184.5
Q ss_pred cccccCCC--CCCceEEEEEe---CCCcEEEEEEccC--CCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEE
Q 011349 57 NIVSEHGE--KAPNVVYKGLV---DEDRWIAVKRFNR--SAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 57 ~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+|. |.+|.||.+.. .++..+|+|+-+. ........=.+|+....++ .|+|.++.+..+...+..++-
T Consensus 117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq 196 (524)
T KOG0601|consen 117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ 196 (524)
T ss_pred ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence 44567799 99999999885 4577899998443 3223344456777777788 499999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccC
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ----ALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNS 203 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~ 203 (488)
+|++ +.+|..+... ...-++....+.+..+... ||.++|+.+ ++|-|+||.||++..+ ...+++|||+...+
T Consensus 197 tE~~-~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 197 TELC-GESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred eccc-cchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeEEc
Confidence 9999 4888888763 2234788888999999999 999999999 9999999999999988 78899999998877
Q ss_pred CCCC---------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC
Q 011349 204 RDGK---------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 204 ~~~~---------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
.+.. ...+...|++||... +.++..+|+|++|.++.+..++..++...-. ..+.++-...+..++
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-----~~W~~~r~~~ip~e~ 347 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN-----SSWSQLRQGYIPLEF 347 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC-----CCccccccccCchhh
Confidence 6543 114567899999987 5788899999999999999999876532211 112222222233344
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+.++...+..+++.+|-.|++.+.+.++
T Consensus 348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 44445667779999999999999998877664
No 441
>KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown]
Probab=99.60 E-value=5e-15 Score=135.19 Aligned_cols=104 Identities=25% Similarity=0.336 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..++++|+.||++|.|++||.||+++|..+|. ++.++.|||.+|+++++|..|..+|+.|+.|+..+.+||.++|.
T Consensus 95 ~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~~ 173 (536)
T KOG4648|consen 95 KKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRMQ 173 (536)
T ss_pred HhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHHH
Confidence 44556899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+...+|+..||.++++.+|+|+|+.
T Consensus 174 AR~~Lg~~~EAKkD~E~vL~LEP~~ 198 (536)
T KOG4648|consen 174 ARESLGNNMEAKKDCETVLALEPKN 198 (536)
T ss_pred HHHHHhhHHHHHHhHHHHHhhCccc
Confidence 9999999999999999999999984
No 442
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional
Probab=99.60 E-value=5.6e-15 Score=144.62 Aligned_cols=102 Identities=24% Similarity=0.333 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 463 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 463 (488)
..+..+|+.++..|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhccccccc
Q 011349 464 GLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 464 ~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|+|++|+.+|++|++++|++.
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~ 104 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDS 104 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999864
No 443
>KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=4.1e-15 Score=141.69 Aligned_cols=98 Identities=24% Similarity=0.379 Sum_probs=94.0
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
++.+.|.+++++||.+|++|+|++||++|++||++.|+ .+..|.||+.||..+|++++.++++.+|++++|++.+|+++
T Consensus 110 ~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~R 188 (606)
T KOG0547|consen 110 ERLKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLR 188 (606)
T ss_pred HHHHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHH
Confidence 34577899999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHH
Q 011349 458 QAAALFGLGMNNDAQETLK 476 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~ 476 (488)
++.++..+|++++|+.+..
T Consensus 189 RA~A~E~lg~~~eal~D~t 207 (606)
T KOG0547|consen 189 RASAHEQLGKFDEALFDVT 207 (606)
T ss_pred HHHHHHhhccHHHHHHhhh
Confidence 9999999999999998865
No 444
>PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional
Probab=99.59 E-value=1.3e-14 Score=120.83 Aligned_cols=101 Identities=18% Similarity=0.048 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+..+..|..|..+++.|++++|...|+-+..++|. ++..|+++|.|+..+|+|++|+..|.+|+.++|+++.++++.|.
T Consensus 33 ~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~ 111 (157)
T PRK15363 33 QPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAE 111 (157)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 55678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~ 482 (488)
|++.+|+.++|.+.|+.|+..-
T Consensus 112 c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 112 CYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999775
No 445
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.59 E-value=5.4e-15 Score=148.36 Aligned_cols=140 Identities=20% Similarity=0.139 Sum_probs=99.2
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCCh----------------------------------------HHHHH
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS----------------------------------------RQFLE 99 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~ 99 (488)
+.||.|++|.||+|++.+|+.||||+.++...... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 46899999999999998999999999875421100 02455
Q ss_pred HHHHHhhcC----CCCCccccccee-cCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHH-HHHHHHhCCC
Q 011349 100 EARAVGLLR----SERLVNLIGCCC-EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ-ALDYCSSKGR 173 (488)
Q Consensus 100 E~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~-~l~~LH~~~~ 173 (488)
|+..+.++. |.+-+.+-.++. ..+..+|||||++|++|.+...... ..+ ....++..++. .+..+|..|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l~ql~~~g- 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFLNQVLRDG- 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHHHHHHhCC-
Confidence 666666662 222222222222 2345789999999999988764211 112 23456666666 468889999
Q ss_pred cccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 174 ALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 174 iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
++|+|+||.||+++.++.++++|||++....
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999986553
No 446
>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=7.5e-15 Score=138.33 Aligned_cols=109 Identities=20% Similarity=0.316 Sum_probs=99.5
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC--------------chHHHhcHHHHHHhhCCHHHHHHHHHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV--------------SPTVFARRCLCYLLSDMPQEALGDAMQ 443 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~~ 443 (488)
+.++.|...+.+|+.+|+.|+|..|...|++|+..-+.. ...+++|+|.||+++++|.+|+..+++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 577888999999999999999999999999998543210 125799999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 444 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|+++|+|.+|+|++|.|+..+|+|+.|+.+|++|++++|+|+
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nk 325 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNK 325 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcH
Confidence 9999999999999999999999999999999999999999975
No 447
>PRK11189 lipoprotein NlpI; Provisional
Probab=99.56 E-value=3.3e-14 Score=136.20 Aligned_cols=105 Identities=11% Similarity=-0.017 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..|+++|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|++.|+++++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+++..|++++|++.|+++++++|++.
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999753
No 448
>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD. ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array.
Probab=99.52 E-value=1.3e-13 Score=116.13 Aligned_cols=105 Identities=13% Similarity=0.211 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++...+.+|..++..|++++|+..|+++++.+|. ++.++.++|.++..+|++++|+..++++++++|+++..++.+|.
T Consensus 15 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~ 93 (135)
T TIGR02552 15 EQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAE 93 (135)
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 45677899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|++.
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~p~~~ 119 (135)
T TIGR02552 94 CLLALGEPESALKALDLAIEICGENP 119 (135)
T ss_pred HHHHcCCHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999865
No 449
>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional
Probab=99.50 E-value=1.8e-13 Score=122.51 Aligned_cols=107 Identities=14% Similarity=0.096 Sum_probs=100.3
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHH-HhhCC--HHHHHHHHHHHHHhCCCCHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCY-LLSDM--PQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~-~~~~~--~~~A~~~~~~al~l~p~~~~a~ 455 (488)
..+++..|...|..+...|++++|+..|++|++++|+ ++.++.++|.++ ...|+ +++|++.++++++++|+++.++
T Consensus 69 ~P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al 147 (198)
T PRK10370 69 NPQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTAL 147 (198)
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHH
Confidence 3467889999999999999999999999999999999 999999999985 67787 5999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 456 YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 456 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+|.+++.+|++++|+.+|+++++++|.+.
T Consensus 148 ~~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 148 MLLASDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 9999999999999999999999999988643
No 450
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.50 E-value=7.3e-14 Score=136.58 Aligned_cols=106 Identities=13% Similarity=0.074 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.-+.+..+.|..+-++|++++|+.+|++||.+.|. .+.+|.|+|..|-.+|+.++|+++|++||+++|.+++|+.++|.
T Consensus 386 ~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLas 464 (966)
T KOG4626|consen 386 EFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLAS 464 (966)
T ss_pred hhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHHH
Confidence 44678889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccccC
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKHR 487 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~~ 487 (488)
+|...|+..+|++.|+.||+++||-++
T Consensus 465 i~kDsGni~~AI~sY~~aLklkPDfpd 491 (966)
T KOG4626|consen 465 IYKDSGNIPEAIQSYRTALKLKPDFPD 491 (966)
T ss_pred HhhccCCcHHHHHHHHHHHccCCCCch
Confidence 999999999999999999999999664
No 451
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.48 E-value=1.7e-13 Score=120.33 Aligned_cols=129 Identities=19% Similarity=0.075 Sum_probs=97.4
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCC-cccccceecCCeeeEEEecCCCCCh
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERL-VNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
++.++.|.++.||++... +..|++|....... ....+.+|+.+++.+.+.++ ++++.+. ....++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 356789999999999874 67799999865432 23357889999999976554 4555443 3345899999999887
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----cccccccCCceeecCCCCCeeccCCCccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGR----ALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
...- . ....++.+++++|..||+.+. ++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 6431 1 113456799999999999871 49999999999999 67899999998764
No 452
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.47 E-value=2.8e-14 Score=144.75 Aligned_cols=144 Identities=15% Similarity=0.110 Sum_probs=93.4
Q ss_pred CCcccccccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCC--------------------------C--------hH--
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWP--------------------------D--------SR-- 95 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------------------------~--------~~-- 95 (488)
|+.+.. +.+|+|++|.||+|++++ |+.||||++++.-.. + .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 333444 678999999999999776 999999999754210 0 01
Q ss_pred ----HHHHHHHHHhhcC----CCCCcccccceec-CCeeeEEEecCCCCChhhhhccCCCC----CCCHHHHHHHHHHHH
Q 011349 96 ----QFLEEARAVGLLR----SERLVNLIGCCCE-GEERLLVAEFMPNETLSKHLFHWENQ----PMKWAMRVRVALYLA 162 (488)
Q Consensus 96 ----~~~~E~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~----~l~~~~~~~i~~~i~ 162 (488)
++.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+++.++-.-...+ .+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 2445555555552 3333333333322 34568999999999998742110111 13333333334443
Q ss_pred HHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccCCC
Q 011349 163 QALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNSRD 205 (488)
Q Consensus 163 ~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~~~ 205 (488)
+..| ++|+|+||.||+++.++ .++++|||++.....
T Consensus 277 ------f~~G-ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 ------FRDG-FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------HhCC-eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4578 99999999999999888 999999999876543
No 453
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.45 E-value=7.4e-14 Score=127.53 Aligned_cols=200 Identities=17% Similarity=0.208 Sum_probs=141.9
Q ss_pred HHHhhcCCCCCcccccceecC-----CeeeEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-C
Q 011349 102 RAVGLLRSERLVNLIGCCCEG-----EERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKG-R 173 (488)
Q Consensus 102 ~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~ 173 (488)
..|-++-|.|||+++.++.+. ....+++|||..|+|..+|++. ....+......+|+.||+.||.|||+.. +
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 345566799999999998653 3578999999999999999753 3456888889999999999999999974 5
Q ss_pred cccccccCCceeecCCCCCeeccCCCcccC------C--CCCccccccCCCCccccccCCcccCCceEeehHHHHHHhhC
Q 011349 174 ALYHDLNTYRILFDQDGNPRLSCFGLMKNS------R--DGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 245 (488)
Q Consensus 174 iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~------~--~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg 245 (488)
|+|+++...-|++..+|-+|+.----.... . ......+-++|.+||.-.....+-++|||+||...+||..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 899999999999998888887421111000 0 01112345889999998777788899999999999999988
Q ss_pred CCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 246 KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 246 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
..-+................+ .. .....=+.++..|+...|..||+|.+++-|.--
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i----~~----len~lqr~~i~kcl~~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVI----IG----LENGLQRGSITKCLEGEPNGRPDARLLLFHPLL 334 (458)
T ss_pred eeccCCCcceeehhhhhhhhe----ee----ccCccccCcCcccccCCCCCCcchhhhhcCcee
Confidence 753222111101111111100 00 001122567899999999999999999988543
No 454
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.45 E-value=6.7e-13 Score=132.67 Aligned_cols=163 Identities=14% Similarity=0.162 Sum_probs=129.0
Q ss_pred eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHH
Q 011349 75 VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154 (488)
Q Consensus 75 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~ 154 (488)
..++.+|.|...+...........+-++.|+.++||||+++++.+...+..|||+|-+ ..|..++.. ++...+
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~-----l~~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE-----LGKEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH-----hHHHHH
Confidence 5678889999988766433456788899999999999999999999999999999999 478888853 345666
Q ss_pred HHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc----cccccCCCCccccccCCcccCC
Q 011349 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS----YSTNLAFTPPEYLRTGRVIPES 230 (488)
Q Consensus 155 ~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~----~~~t~~y~aPE~~~~~~~~~~s 230 (488)
.-.+.||+.||.|||..+.++|++|.-+-|+++..|..||++|-++........ ..---.|..|+.+.... -..
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~ 184 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSI 184 (690)
T ss_pred HHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cch
Confidence 677899999999999776699999999999999999999999988765433221 11122455665543221 346
Q ss_pred ceEeehHHHHHHhhCC
Q 011349 231 VVYSFGTLLLDLLSGK 246 (488)
Q Consensus 231 Dv~slG~il~el~tg~ 246 (488)
|.|.|||+++|++.|.
T Consensus 185 D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 185 DSWGLGCLIEELFNGS 200 (690)
T ss_pred hhhhHHHHHHHHhCcc
Confidence 9999999999999994
No 455
>KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=4.3e-13 Score=117.26 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=107.4
Q ss_pred cCchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhh--------ccCCCC---------chHHHhcH
Q 011349 362 KDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFI--------DGGTMV---------SPTVFARR 424 (488)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai--------~~~p~~---------~~~~~~~~ 424 (488)
...++...+.+.-...+.++....+.++||.+|+.|+|.+|...|..|| +..|-+ ...++.|.
T Consensus 157 e~P~qYq~e~WqlsddeKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy 236 (329)
T KOG0545|consen 157 EAPSQYQRETWQLSDDEKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNY 236 (329)
T ss_pred cCchhhccccccCCchHhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhH
Confidence 3444455566666667788889999999999999999999999999997 223430 33578999
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 425 CLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 425 a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+.|++..|+|-++++++..++..+|+|.+|||++|.++..--+.++|.++|.++|++||.
T Consensus 237 ~QC~L~~~e~yevleh~seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldps 296 (329)
T KOG0545|consen 237 CQCLLKKEEYYEVLEHCSEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPS 296 (329)
T ss_pred HHHHhhHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChh
Confidence 999999999999999999999999999999999999999999999999999999999995
No 456
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=2.6e-13 Score=134.35 Aligned_cols=243 Identities=16% Similarity=0.120 Sum_probs=179.4
Q ss_pred cccccCCCCCCceEEEEEe--CCCcEEEEEEccCCCCCChHH--HHHHHHHHhhc-CCCCCcccccceecCCeeeEEEec
Q 011349 57 NIVSEHGEKAPNVVYKGLV--DEDRWIAVKRFNRSAWPDSRQ--FLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..+..||.|.|+.|+.... .++..+++|.+.........+ -..|+-+...+ .|.++++....|......|+--||
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~ 347 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEF 347 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhh
Confidence 5677889999999999873 457789999887654333322 34577777777 599999998888888888899999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCCCC-Ccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDG-KSY 209 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~-~~~ 209 (488)
|.++++...+. ....+.+..++++..|++.++.++|+.. ++|+|+||+||++..+ +.-++.|||......-. ...
T Consensus 348 ~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~ 424 (524)
T KOG0601|consen 348 CEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKL-FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVF 424 (524)
T ss_pred hcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchh-hhcccccccceeeccchhhhhccccccccccceecccc
Confidence 99998876663 4456888899999999999999999999 9999999999999876 78899999998653221 122
Q ss_pred c-cccCC-CCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 210 S-TNLAF-TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 210 ~-~t~~y-~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
. ++..| .+|.......+..+.|++|||..+.+.+++.+..+.. ..+..+...... . .......+..+..
T Consensus 425 ~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-------~~~~~i~~~~~p-~-~~~~~~~~q~~~k 495 (524)
T KOG0601|consen 425 HHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-------VQSLTIRSGDTP-N-LPGLKLQLQVLLK 495 (524)
T ss_pred cccccccccchhhccccccccccccccccccccccccCcccCccc-------ccceeeeccccc-C-CCchHHhhhhhhh
Confidence 2 23334 3555555577888999999999999999998643321 111111111111 1 1122367888899
Q ss_pred HhccCCCCCCCCHHHHHHHhchhh
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
.+...++..||.+.++..+.+..+
T Consensus 496 v~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 496 VMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred hhcCCccccchhhhhhcccchhhh
Confidence 999999999999999887765443
No 457
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.42 E-value=5.1e-13 Score=130.76 Aligned_cols=105 Identities=10% Similarity=0.026 Sum_probs=101.0
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
....+.+.++.|+++.+.|.+++|...|.+|++..|. .+.+++|+|.+|.++|++++|+.+|..||.++|.+++||.++
T Consensus 350 ~p~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~Nm 428 (966)
T KOG4626|consen 350 CPNHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALSNM 428 (966)
T ss_pred CCccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHHhc
Confidence 3466889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
|..|..+|+.++|+++|.+|+.++|.
T Consensus 429 Gnt~ke~g~v~~A~q~y~rAI~~nPt 454 (966)
T KOG4626|consen 429 GNTYKEMGDVSAAIQCYTRAIQINPT 454 (966)
T ss_pred chHHHHhhhHHHHHHHHHHHHhcCcH
Confidence 99999999999999999999999995
No 458
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.41 E-value=4.3e-13 Score=125.73 Aligned_cols=104 Identities=23% Similarity=0.360 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC---CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM---VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
+.-..|...|+.+|++|+|..|.++|+.||.++|. .++.+|.|||.++..+|+..+|+.+++.|++|+|.+.+||.+
T Consensus 247 k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall~ 326 (486)
T KOG0550|consen 247 KKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALLR 326 (486)
T ss_pred HHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHHH
Confidence 56688999999999999999999999999999997 234679999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+|.|+..+++|++|+++|++|++++-+
T Consensus 327 ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 327 RANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999988654
No 459
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A ....
Probab=99.41 E-value=5.5e-13 Score=98.00 Aligned_cols=67 Identities=19% Similarity=0.242 Sum_probs=46.3
Q ss_pred chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCC-ChHHHHHHHHHhhcccc
Q 011349 417 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLG-MNNDAQETLKDGTNLEA 483 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~p 483 (488)
++.+|.++|.++...|+|++|+.+|++|++++|+++.+|+++|.++..+| ++++|+++|++|+++||
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 45566666777777777777777777777777777777777777777776 56777777777776666
No 460
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.41 E-value=2.9e-12 Score=113.13 Aligned_cols=137 Identities=12% Similarity=0.120 Sum_probs=100.9
Q ss_pred cccCCCCCCceEEEEEeCC-------CcEEEEEEccCCCC---------------------CC-hHHH----HHHHHHHh
Q 011349 59 VSEHGEKAPNVVYKGLVDE-------DRWIAVKRFNRSAW---------------------PD-SRQF----LEEARAVG 105 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~---------------------~~-~~~~----~~E~~~l~ 105 (488)
.+.||.|--+.||.|...+ +..+|||+.+.+.. .+ ...+ .+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3567999999999998443 47899998753210 01 1122 38999999
Q ss_pred hcCC--CCCcccccceecCCeeeEEEecCCCCChhh-hhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCcccccccC
Q 011349 106 LLRS--ERLVNLIGCCCEGEERLLVAEFMPNETLSK-HLFHWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNT 181 (488)
Q Consensus 106 ~l~h--~niv~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~iiH~Dlkp 181 (488)
++.. -+++..+++ ..-+|||||+.+..+.. .+ ....++..+...+..+++.+|..| |..+ +||+||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L---kd~~~~~~~~~~i~~~i~~~l~~l~H~~g-lVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL---KDAKLNDEEMKNAYYQVLSMMKQLYKECN-LVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh---hccccCHHHHHHHHHHHHHHHHHHHHhCC-eecCCCCH
Confidence 9953 567777764 45689999997643422 22 223456667778899999999999 8888 99999999
Q ss_pred CceeecCCCCCeeccCCCcccCC
Q 011349 182 YRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 182 ~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.|||++ ++.+.|+|||.+-...
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4689999999876554
No 461
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70).
Probab=99.40 E-value=2.3e-12 Score=136.67 Aligned_cols=104 Identities=26% Similarity=0.369 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
+...+..++++|+.+++.|+|++|+..|+++|++.|+ +..|.|+|.||.++|++++|++++++|++++|++.++|+++
T Consensus 123 ~~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~ 200 (615)
T TIGR00990 123 RKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRR 200 (615)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3456788999999999999999999999999999995 56899999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
|.+|..+|++++|+.+|..++.+++.
T Consensus 201 a~a~~~lg~~~eA~~~~~~~~~~~~~ 226 (615)
T TIGR00990 201 ANAYDGLGKYADALLDLTASCIIDGF 226 (615)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999888766553
No 462
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A ....
Probab=99.39 E-value=7.1e-13 Score=97.44 Aligned_cols=67 Identities=21% Similarity=0.262 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC-CHHHHHHHHHHHHHhCC
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-MPQEALGDAMQAQVISP 449 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~l~p 449 (488)
+|..|+.+|..++..|+|++|+..|++||+++|+ ++.+|+++|.||..+| ++++|++++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 5789999999999999999999999999999999 9999999999999999 79999999999999998
No 463
>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF. Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction.
Probab=99.36 E-value=7e-12 Score=102.86 Aligned_cols=103 Identities=17% Similarity=0.155 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---HHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---PTAFY 456 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~ 456 (488)
+..++..|..+++.|+|++|++.|+++++.+|+ + +.+++.+|.++.+.|++++|+..+++++..+|++ +.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (119)
T TIGR02795 2 EEAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALL 80 (119)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHH
Confidence 467899999999999999999999999999987 4 5688899999999999999999999999999986 67899
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|.++..+|++++|+..|+++++..|+..
T Consensus 81 ~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 110 (119)
T TIGR02795 81 KLGMSLQELGDKEKAKATLQQVIKRYPGSS 110 (119)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHCcCCh
Confidence 999999999999999999999999999864
No 464
>KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=1.9e-12 Score=113.02 Aligned_cols=99 Identities=22% Similarity=0.332 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..+.++|+.+|..++|..|+.+|.+||.++|. .+.+|.|+|.||+++++++.+..++.+|++++|+.++++|.+|.+
T Consensus 9 ~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~~ 87 (284)
T KOG4642|consen 9 SAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQW 87 (284)
T ss_pred HHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcc
Q 011349 462 LFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l 481 (488)
+.....|++|+..+.+|..+
T Consensus 88 ~l~s~~~~eaI~~Lqra~sl 107 (284)
T KOG4642|consen 88 LLQSKGYDEAIKVLQRAYSL 107 (284)
T ss_pred HHhhccccHHHHHHHHHHHH
Confidence 99999999999999999655
No 465
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.35 E-value=3.2e-12 Score=117.13 Aligned_cols=107 Identities=17% Similarity=0.226 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
....+++..++.|..++..|+|..|+..|-.||+.+|+ +..+++.||.+|+.+|+-..|+.+++++|++.|++.-|...
T Consensus 33 ~~~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQ 111 (504)
T KOG0624|consen 33 ASPADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQ 111 (504)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHH
Confidence 44577888999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|.++.++|++++|.++|+.+|+.+|.+
T Consensus 112 Rg~vllK~Gele~A~~DF~~vl~~~~s~ 139 (504)
T KOG0624|consen 112 RGVVLLKQGELEQAEADFDQVLQHEPSN 139 (504)
T ss_pred hchhhhhcccHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999964
No 466
>KOG1125 consensus TPR repeat-containing protein [General function prediction only]
Probab=99.35 E-value=1.4e-12 Score=127.37 Aligned_cols=104 Identities=14% Similarity=0.189 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++....-+|..|+-.|+|++|+.+|+.||..+|+ +..+|+.+|..+..-.+.++||..|.+|++|.|++.+++|++|.
T Consensus 428 ~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgI 506 (579)
T KOG1125|consen 428 IDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGI 506 (579)
T ss_pred CChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhh
Confidence 45667778999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+++.+|.|+||.+.|-.||.+.++.
T Consensus 507 S~mNlG~ykEA~~hlL~AL~mq~ks 531 (579)
T KOG1125|consen 507 SCMNLGAYKEAVKHLLEALSMQRKS 531 (579)
T ss_pred hhhhhhhHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999998873
No 467
>KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=2.5e-12 Score=117.49 Aligned_cols=106 Identities=21% Similarity=0.308 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc---CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG---GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
-+.|..+++.||.+|+.++|..|+++|+++|.. ||+.++.+|+|||.|.+-+|+|..||.|+.+|++++|.+.+||+
T Consensus 78 ~E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~ 157 (390)
T KOG0551|consen 78 HEQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYI 157 (390)
T ss_pred HHHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhh
Confidence 357889999999999999999999999999964 67777899999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+-|.|++.+.++++|....+..+.+|-+.
T Consensus 158 R~Akc~~eLe~~~~a~nw~ee~~~~d~e~ 186 (390)
T KOG0551|consen 158 RGAKCLLELERFAEAVNWCEEGLQIDDEA 186 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhHHH
Confidence 99999999999999999999888876553
No 468
>COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=99.34 E-value=1.1e-11 Score=108.14 Aligned_cols=102 Identities=16% Similarity=0.064 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh--CCCCHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI--SPDWPTAFYLQAA 460 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l--~p~~~~a~~~~g~ 460 (488)
..+|.-+|..|...|+.+.|-+.|++|+.++|+ +..+++|-|.-+...|+|++|...|++|+.. .|.-++.|-|+|.
T Consensus 69 ~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN~G~ 147 (250)
T COG3063 69 YLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLENLGL 147 (250)
T ss_pred HHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhhhHH
Confidence 444555555555555555555555555555555 5555555555555555555555555555543 2333445555555
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
|-.++|+++.|.++|+++|++||++
T Consensus 148 Cal~~gq~~~A~~~l~raL~~dp~~ 172 (250)
T COG3063 148 CALKAGQFDQAEEYLKRALELDPQF 172 (250)
T ss_pred HHhhcCCchhHHHHHHHHHHhCcCC
Confidence 5555555555555555555555543
No 469
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.33 E-value=7.4e-13 Score=127.28 Aligned_cols=104 Identities=24% Similarity=0.314 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.|..+.++|+.++..++|+.|+..|.|||+++|+ .+.+|.+|+.++++.++|..|+.|+.+||+++|.+.++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
...++++.+|+.+|+.+..+.|+++
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~ 106 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDP 106 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcH
Confidence 9999999999999999999999865
No 470
>KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning]
Probab=99.33 E-value=1.2e-12 Score=129.73 Aligned_cols=105 Identities=13% Similarity=0.098 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+++|...||++--+++++.||++|++||++||+ .+-+|..+|.=+.....|+.|..+|..||.++|.+..|||.+|.
T Consensus 419 ~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYGlG~ 497 (638)
T KOG1126|consen 419 NSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYGLGT 497 (638)
T ss_pred CCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHhhhh
Confidence 55789999999999999999999999999999998 88888888888888888999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|.++++++.|.-.|++|++++|.+.
T Consensus 498 vy~Kqek~e~Ae~~fqkA~~INP~ns 523 (638)
T KOG1126|consen 498 VYLKQEKLEFAEFHFQKAVEINPSNS 523 (638)
T ss_pred heeccchhhHHHHHHHhhhcCCccch
Confidence 99999999999999999999888753
No 471
>cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C
Probab=99.32 E-value=1.4e-11 Score=95.76 Aligned_cols=99 Identities=21% Similarity=0.320 Sum_probs=94.9
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 011349 385 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 464 (488)
Q Consensus 385 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 464 (488)
.++.+|..++..|++++|+..|+++++..|. +..++..+|.++...+++++|+..+++++++.|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 5788999999999999999999999999999 888999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhccccc
Q 011349 465 LGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 465 ~~~~~~A~~~~~~al~l~p~ 484 (488)
+|++++|...++++++++|+
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999999884
No 472
>PRK02603 photosystem I assembly protein Ycf3; Provisional
Probab=99.32 E-value=1.9e-11 Score=107.50 Aligned_cols=107 Identities=19% Similarity=0.183 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
....+..++.+|..+...|++++|+..|+++++..|+. ...++.++|.++..+|++++|+..+++++++.|++..+++
T Consensus 31 ~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 110 (172)
T PRK02603 31 KAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALN 110 (172)
T ss_pred HhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 44667889999999999999999999999999887651 2468999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCC--------------hHHHHHHHHHhhcccccc
Q 011349 457 LQAAALFGLGM--------------NNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 457 ~~g~~~~~~~~--------------~~~A~~~~~~al~l~p~~ 485 (488)
.+|.++..+|+ +++|++.++++++++|++
T Consensus 111 ~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~ 153 (172)
T PRK02603 111 NIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNN 153 (172)
T ss_pred HHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchh
Confidence 99999999998 788999999999999975
No 473
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70).
Probab=99.32 E-value=1.2e-11 Score=131.04 Aligned_cols=101 Identities=14% Similarity=0.119 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..|..+|..++..|+|++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+.+|+++++++|++..+|+++|.++
T Consensus 365 ~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~kal~l~P~~~~~~~~la~~~ 443 (615)
T TIGR00990 365 TQSYIKRASMNLELGDPDKAEEDFDKALKLNSE-DPDIYYHRAQLHFIKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQ 443 (615)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCccCHHHHHHHHHHH
Confidence 344555555555555555555555555555555 5555555555555555555555555555555555555555555555
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+.+|++++|+..|+++++++|+
T Consensus 444 ~~~g~~~eA~~~~~~al~~~P~ 465 (615)
T TIGR00990 444 YKEGSIASSMATFRRCKKNFPE 465 (615)
T ss_pred HHCCCHHHHHHHHHHHHHhCCC
Confidence 5555555555555555555554
No 474
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.31 E-value=1.5e-11 Score=112.93 Aligned_cols=140 Identities=17% Similarity=0.172 Sum_probs=109.9
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCC--CCCcccccceecC---CeeeEEEecCC
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRS--ERLVNLIGCCCEG---EERLLVAEFMP 133 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~---~~~~lv~e~~~ 133 (488)
+.+|.|..+.||++...+|..+++|....... .....+.+|+++++.+.+ .++++++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 45799999999999976677899999865432 134578999999999975 3467777776653 25689999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------------
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG----------------------------------------- 172 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------------- 172 (488)
|.++.+.+. ...++..+...++.+++++|..||+..
T Consensus 84 G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 998887653 145778888888889999998888420
Q ss_pred --------------CcccccccCCceeecC--CCCCeeccCCCccc
Q 011349 173 --------------RALYHDLNTYRILFDQ--DGNPRLSCFGLMKN 202 (488)
Q Consensus 173 --------------~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~ 202 (488)
.++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1589999999999998 56688999998764
No 475
>PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A.
Probab=99.29 E-value=4.2e-12 Score=97.20 Aligned_cols=83 Identities=20% Similarity=0.355 Sum_probs=74.9
Q ss_pred hcCChHHHHHHHHHhhccCCCC-chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHH
Q 011349 395 RAKDFPTAIECYTHFIDGGTMV-SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQE 473 (488)
Q Consensus 395 ~~~~~~~A~~~~~~ai~~~p~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~ 473 (488)
++|+|+.|+..|+++++.+|.+ +..+++++|.||+++|+|++|+..+++ ++.+|.++..++.+|.+++.+|+|++|++
T Consensus 1 ~~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~ 79 (84)
T PF12895_consen 1 DQGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIK 79 (84)
T ss_dssp HTT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHH
T ss_pred CCccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 3689999999999999999963 466777899999999999999999999 99999999999999999999999999999
Q ss_pred HHHHh
Q 011349 474 TLKDG 478 (488)
Q Consensus 474 ~~~~a 478 (488)
.|++|
T Consensus 80 ~l~~~ 84 (84)
T PF12895_consen 80 ALEKA 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99886
No 476
>CHL00033 ycf3 photosystem I assembly protein Ycf3
Probab=99.28 E-value=4.6e-11 Score=104.62 Aligned_cols=107 Identities=18% Similarity=0.106 Sum_probs=93.7
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC--CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM--VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
....+..++..|..+...|+|++|+..|++|+.+.|+ +.+.++.++|.+|...|++++|+..+++|++++|.+..++.
T Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~ 110 (168)
T CHL00033 31 GEKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALN 110 (168)
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 3456889999999999999999999999999988665 13458999999999999999999999999999999999999
Q ss_pred HHHHHHH-------hCCChH-------HHHHHHHHhhcccccc
Q 011349 457 LQAAALF-------GLGMNN-------DAQETLKDGTNLEAKK 485 (488)
Q Consensus 457 ~~g~~~~-------~~~~~~-------~A~~~~~~al~l~p~~ 485 (488)
++|.++. .+|+++ +|+..|++++.++|++
T Consensus 111 ~la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~ 153 (168)
T CHL00033 111 NMAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN 153 (168)
T ss_pred HHHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 9999999 777866 6666777788888864
No 477
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.28 E-value=2.1e-12 Score=134.61 Aligned_cols=242 Identities=18% Similarity=0.131 Sum_probs=171.2
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+....+++.+-+|+++.++.+. --.|...++|+..... ..+.+...++-.++-..++|-+++...-+......+||
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 3334566677899999999877 3335444555443221 12223333333344344567777666656667789999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
++|..|++|...++ ..+..+..-....+..+..++.+||+.. ++|+|++|.|+++..+++.++.|||.......
T Consensus 883 ~~~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~~-r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSSL-RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hHHhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccch-hhcccccccchhhcccCCcccCccccccccccccC
Confidence 99999999999886 3445666667777888899999999998 99999999999999999999999984332110
Q ss_pred --------------------------------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcch
Q 011349 206 --------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHA 253 (488)
Q Consensus 206 --------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~ 253 (488)
.....+|+.|.+||...+......+|.|++|++++|.++|.+||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 001246889999999999999999999999999999999998876553
Q ss_pred hhhhhcccccccccccc-CCCCChhhHHHHHHHHHHhccCCCCCCCCHH
Q 011349 254 LDLIRGKNFLMLMDSCL-EGHFSNDDGTELVRLASRCLQYEPRERPNAK 301 (488)
Q Consensus 254 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 301 (488)
.... +..++.... ...-+...+....+++.+.+..+|.+|..+.
T Consensus 1040 pq~~----f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1040 PQQI----FENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhh----hhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 3222 222222111 1222334567889999999999999997655
No 478
>KOG4555 consensus TPR repeat-containing protein [Function unknown]
Probab=99.28 E-value=8.1e-11 Score=93.07 Aligned_cols=102 Identities=20% Similarity=0.193 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----HHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW----PTAF 455 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~----~~a~ 455 (488)
.+....+.-+|..+...|+.+.|++.|.++|.+.|. .+.+|+|||.++...|+.++|+.++++|+++.-+. -.+|
T Consensus 40 ~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa~ 118 (175)
T KOG4555|consen 40 IKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQAF 118 (175)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHHH
Confidence 345567778999999999999999999999999999 99999999999999999999999999999997654 3579
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccc
Q 011349 456 YLQAAALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 456 ~~~g~~~~~~~~~~~A~~~~~~al~l~ 482 (488)
..+|..|..+|+.+.|..+|+.|.++-
T Consensus 119 vQRg~lyRl~g~dd~AR~DFe~AA~LG 145 (175)
T KOG4555|consen 119 VQRGLLYRLLGNDDAARADFEAAAQLG 145 (175)
T ss_pred HHHHHHHHHhCchHHHHHhHHHHHHhC
Confidence 999999999999999999999998764
No 479
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=4e-11 Score=102.12 Aligned_cols=131 Identities=20% Similarity=0.149 Sum_probs=97.9
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEEEccCCC--CCC------hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 61 EHGEKAPNVVYKGLVDEDRWIAVKRFNRSA--WPD------SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+++|+-+.+|.+.+. |..+.+|.=.+.. .+. .+.-.+|++++.+++--.|..-.=+..+...-.|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 4589999999999763 4446666432221 111 134678999999997555554444555677788999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
+|..|.+.+... ...++..|-.-+.-||..| |+|+||.++||+++.++ +.++||||+...
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g-ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKAG-IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC-eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 999999888531 2567778888888999999 99999999999998665 999999998743
No 480
>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional
Probab=99.27 E-value=3.1e-11 Score=131.50 Aligned_cols=103 Identities=12% Similarity=-0.080 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..+...|.++.+.|++++|+..|+++++++|+ ++.+++++|.++...|++++|++.|++|++++|+++.+++++|.++
T Consensus 609 ~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~al 687 (987)
T PRK09782 609 ANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYVN 687 (987)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 678899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+|++++|+++|++|++++|+..
T Consensus 688 ~~lGd~~eA~~~l~~Al~l~P~~a 711 (987)
T PRK09782 688 QRLDDMAATQHYARLVIDDIDNQA 711 (987)
T ss_pred HHCCCHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999864
No 481
>PRK11189 lipoprotein NlpI; Provisional
Probab=99.25 E-value=5.8e-11 Score=113.80 Aligned_cols=97 Identities=14% Similarity=0.038 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++.+|..+|..+...|+|++|+..|+++++++|+ +..+|.++|.++...|++++|+++++++++++|+++...+.. .
T Consensus 96 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~g~~~eA~~~~~~al~~~P~~~~~~~~~-~ 173 (296)
T PRK11189 96 DMADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAYLNRGIALYYGGRYELAQDDLLAFYQDDPNDPYRALWL-Y 173 (296)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHH-H
Confidence 45678888888888888888888888888888888 888888888888888888888888888888777765211111 1
Q ss_pred HHHhCCChHHHHHHHHHhh
Q 011349 461 ALFGLGMNNDAQETLKDGT 479 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al 479 (488)
.+...+++++|++.|++++
T Consensus 174 l~~~~~~~~~A~~~l~~~~ 192 (296)
T PRK11189 174 LAESKLDPKQAKENLKQRY 192 (296)
T ss_pred HHHccCCHHHHHHHHHHHH
Confidence 1223445555555554443
No 482
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.24 E-value=6.8e-11 Score=100.19 Aligned_cols=144 Identities=19% Similarity=0.184 Sum_probs=103.9
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEE-ccCCC-CC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKR-FNRSA-WP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~-~~~~~-~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+..+-+|+-+.|+++.+ .|+.+.||. +.+.- .+ ...+..+|+++|.+++--.|.--.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 345568899999999987 566667774 32211 11 1346788999999997545443333455566668999
Q ss_pred ecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeeccCCCcccC
Q 011349 130 EFMPN-ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLMKNS 203 (488)
Q Consensus 130 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla~~~ 203 (488)
||++| .++.+++...............++..|-+.+.-||..+ +||+||..+||++..++ .+.++|||++...
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99986 48888886544444444445788999999999999999 99999999999996554 3589999997543
No 483
>PRK12370 invasion protein regulator; Provisional
Probab=99.24 E-value=4.5e-11 Score=124.67 Aligned_cols=99 Identities=9% Similarity=-0.077 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++.++..+|..+...|++++|+..|++|++++|+ ++.+++++|.++..+|++++|+..++++++++|+++.+++.++.+
T Consensus 337 ~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~~ 415 (553)
T PRK12370 337 NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWI 415 (553)
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 3444445555555555555555555555555555 555555555555555555555555555555555555444444444
Q ss_pred HHhCCChHHHHHHHHHhhcc
Q 011349 462 LFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l 481 (488)
++.+|++++|++.++++++.
T Consensus 416 ~~~~g~~eeA~~~~~~~l~~ 435 (553)
T PRK12370 416 TYYHTGIDDAIRLGDELRSQ 435 (553)
T ss_pred HHhccCHHHHHHHHHHHHHh
Confidence 44455555555555555444
No 484
>KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.24 E-value=8e-11 Score=112.81 Aligned_cols=102 Identities=18% Similarity=0.234 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+.++.-+|.-+|-.|++..|-+.|+++|+++|. +...|..||.+|+...+-++-..+|.+|..+||+|++.||.+|..+
T Consensus 326 A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~ 404 (606)
T KOG0547|consen 326 AEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMR 404 (606)
T ss_pred HHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHH
Confidence 778888899999999999999999999999998 7777889999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+-+++|++|+++|++|+.|+|++
T Consensus 405 flL~q~e~A~aDF~Kai~L~pe~ 427 (606)
T KOG0547|consen 405 FLLQQYEEAIADFQKAISLDPEN 427 (606)
T ss_pred HHHHHHHHHHHHHHHHhhcChhh
Confidence 99999999999999999999975
No 485
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.23 E-value=1e-10 Score=122.67 Aligned_cols=109 Identities=8% Similarity=-0.075 Sum_probs=95.0
Q ss_pred hhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 377 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 377 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
.+.+.++.+++..|.+..+.|.|++|+..+..+++++|+ +..++.+++.++.+++++++|+..+++++..+|+++.+++
T Consensus 80 ~~~~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~ 158 (694)
T PRK15179 80 RRYPHTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREIL 158 (694)
T ss_pred HhccccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHH
Confidence 455677888888999999999999999999999999998 8888888999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|.++.++|++++|++.|+++++.+|+..
T Consensus 159 ~~a~~l~~~g~~~~A~~~y~~~~~~~p~~~ 188 (694)
T PRK15179 159 LEAKSWDEIGQSEQADACFERLSRQHPEFE 188 (694)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHhcCCCcH
Confidence 999999999999999999999988777643
No 486
>PRK15359 type III secretion system chaperone protein SscB; Provisional
Probab=99.22 E-value=5e-11 Score=101.19 Aligned_cols=85 Identities=15% Similarity=0.042 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++.+|..+|.++...|+|++|+..|+++++++|+ ++.+++++|.|+..+|++++|+..|++|++++|+++.++.++|
T Consensus 55 P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~~~~~ 133 (144)
T PRK15359 55 PWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQ 133 (144)
T ss_pred CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 356789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhC
Q 011349 460 AALFGL 465 (488)
Q Consensus 460 ~~~~~~ 465 (488)
.+...+
T Consensus 134 ~~~~~l 139 (144)
T PRK15359 134 NAQIMV 139 (144)
T ss_pred HHHHHH
Confidence 988765
No 487
>PLN02789 farnesyltranstransferase
Probab=99.20 E-value=3.9e-10 Score=108.10 Aligned_cols=107 Identities=9% Similarity=-0.040 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCH--HHHHHHHHHHHHhCCCCHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAK-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMP--QEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~--~~A~~~~~~al~l~p~~~~a~ 455 (488)
..++..+|..+|.++...| ++++|+..++++++.+|+ +..+|++|+.++.++|+. ++++..++++++++|++..||
T Consensus 67 nP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW 145 (320)
T PLN02789 67 NPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHAW 145 (320)
T ss_pred CchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHHH
Confidence 3467889999999999998 689999999999999999 999999999999999874 789999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 456 YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 456 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+|.++..+|++++|+++++++|++||.+.
T Consensus 146 ~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~ 176 (320)
T PLN02789 146 SHRQWVLRTLGGWEDELEYCHQLLEEDVRNN 176 (320)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHCCCch
Confidence 9999999999999999999999999999863
No 488
>PRK12370 invasion protein regulator; Provisional
Probab=99.17 E-value=1.5e-10 Score=120.85 Aligned_cols=103 Identities=13% Similarity=0.002 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC-CCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS-PDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~-p~~~~a~~~~g 459 (488)
+++.+++..|..+...|++++|+..|++|++++|. ++.++..++.+++..|++++|+..++++++.. |+++.+++.+|
T Consensus 370 ~~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~-~~~~~~~~~~~~~~~g~~eeA~~~~~~~l~~~~p~~~~~~~~la 448 (553)
T PRK12370 370 ISADIKYYYGWNLFMAGQLEEALQTINECLKLDPT-RAAAGITKLWITYYHTGIDDAIRLGDELRSQHLQDNPILLSMQV 448 (553)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-ChhhHHHHHHHHHhccCHHHHHHHHHHHHHhccccCHHHHHHHH
Confidence 45678888999999999999999999999999998 77666666767777899999999999998875 78888899999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+|..+|++++|.+.+++.+..+|+
T Consensus 449 ~~l~~~G~~~eA~~~~~~~~~~~~~ 473 (553)
T PRK12370 449 MFLSLKGKHELARKLTKEISTQEIT 473 (553)
T ss_pred HHHHhCCCHHHHHHHHHHhhhccch
Confidence 9999999999999999888777765
No 489
>PRK15331 chaperone protein SicA; Provisional
Probab=99.17 E-value=2.1e-10 Score=96.14 Aligned_cols=99 Identities=7% Similarity=-0.062 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+..+..|..|..+++.|+|++|...|+-....+|. ++..+..+|.|+..+++|++|+..|..|..++++++...|..|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 45678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhc
Q 011349 461 ALFGLGMNNDAQETLKDGTN 480 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~ 480 (488)
|+..+|+.++|+.+|..+++
T Consensus 114 C~l~l~~~~~A~~~f~~a~~ 133 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNE 133 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999987
No 490
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B.
Probab=99.17 E-value=5e-11 Score=86.33 Aligned_cols=63 Identities=22% Similarity=0.262 Sum_probs=38.5
Q ss_pred cHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 423 RRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 423 ~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+|..+++.|+|++|++.|+++++.+|+++++|+.+|.++..+|++++|++.|+++++++|++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 355566666666666666666666666666666666666666666666666666666666654
No 491
>COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=99.17 E-value=2.1e-10 Score=100.24 Aligned_cols=104 Identities=11% Similarity=0.041 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
+...+.+..++|..|++.|++..|.+.+++||+.||+ +..+|.-+|.+|.+.|+.+.|-+.|++|+.++|++.+.++|.
T Consensus 31 ~~~aa~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNY 109 (250)
T COG3063 31 RNEAAKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNY 109 (250)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhh
Confidence 3455678889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
|..++.+|++++|...|++|+. +|.
T Consensus 110 G~FLC~qg~~~eA~q~F~~Al~-~P~ 134 (250)
T COG3063 110 GAFLCAQGRPEEAMQQFERALA-DPA 134 (250)
T ss_pred hHHHHhCCChHHHHHHHHHHHh-CCC
Confidence 9999999999999999999996 554
No 492
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.16 E-value=4.2e-10 Score=109.48 Aligned_cols=216 Identities=19% Similarity=0.162 Sum_probs=156.0
Q ss_pred CCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeEEEecCCC-CChhh
Q 011349 66 APNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLLVAEFMPN-ETLSK 139 (488)
Q Consensus 66 ~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-gsL~~ 139 (488)
.-.+.|++. .-+|..|++|+++............-+++++++.|.|||++.++|.. +..+++|++|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 345789998 55799999999965554444445567889999999999999999874 3468999999986 67776
Q ss_pred hhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 140 HLFHW-------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 140 ~l~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+.... .+...++..+|.++.|+..||.++|+.| +.-+-|.|.+||++.+.+++|+..|........
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG-LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG-LACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC-ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 55421 2334778999999999999999999999 888999999999999999999888876655443
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
.. |.+.+ -.+-|.=.||.+++-|.||..-.. ..+...... ...+....+.++.+++
T Consensus 447 ~~----------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~--~~d~~~~s~---------~~~I~~~yS~D~rn~v 502 (655)
T KOG3741|consen 447 PT----------EPLES---QQQNDLRDLGLLLLALATGTENSN--RTDSTQSSH---------LTRITTTYSTDLRNVV 502 (655)
T ss_pred CC----------cchhH---HhhhhHHHHHHHHHHHhhcccccc--cccchHHHH---------HHHhhhhhhHHHHHHH
Confidence 20 11111 124677789999999999963211 001111100 1122334567888999
Q ss_pred HHhccCCCCCCCCHHHHHHHh
Q 011349 287 SRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l 307 (488)
.......+++ -+..+++.++
T Consensus 503 ~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 503 EYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHHhcCccc-ccHHHHHHHH
Confidence 9999998887 6788887764
No 493
>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795).
Probab=99.15 E-value=2.2e-10 Score=106.24 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch---HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH---H
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP---TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT---A 454 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~---a 454 (488)
..+..++.+|..++..|+|++|+..|+++++.+|. ++ .+++.+|.+|.+.|++++|+..|+++++.+|+++. +
T Consensus 31 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 109 (235)
T TIGR03302 31 WPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYA 109 (235)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHH
Confidence 44678999999999999999999999999999998 54 57899999999999999999999999999999887 7
Q ss_pred HHHHHHHHHhC--------CChHHHHHHHHHhhccccccc
Q 011349 455 FYLQAAALFGL--------GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 455 ~~~~g~~~~~~--------~~~~~A~~~~~~al~l~p~~~ 486 (488)
++.+|.+++.+ |++++|++.|+++++.+|+..
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 149 (235)
T TIGR03302 110 YYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSE 149 (235)
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCCh
Confidence 99999999987 899999999999999999864
No 494
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B.
Probab=99.15 E-value=1.5e-10 Score=83.73 Aligned_cols=65 Identities=18% Similarity=0.206 Sum_probs=60.9
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH
Q 011349 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 387 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 452 (488)
+.+|..+++.|+|++|+..|+++++.+|+ ++.+++.+|.++..+|++++|+..|+++++++|+++
T Consensus 1 ~~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 1 YALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 46899999999999999999999999999 999999999999999999999999999999999985
No 495
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.14 E-value=2.1e-10 Score=101.08 Aligned_cols=126 Identities=17% Similarity=0.158 Sum_probs=85.2
Q ss_pred eEEEEEeCCCcEEEEEEccCCCCC---------------------C-----hHHHHHHHHHHhhcCCC--CCccccccee
Q 011349 69 VVYKGLVDEDRWIAVKRFNRSAWP---------------------D-----SRQFLEEARAVGLLRSE--RLVNLIGCCC 120 (488)
Q Consensus 69 ~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~--niv~~~~~~~ 120 (488)
.||.|...+|..||||+.+..... . .....+|.+.|.++..- ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 389999888999999987543211 0 12467899999999755 567776542
Q ss_pred cCCeeeEEEecCC--CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 121 EGEERLLVAEFMP--NETLSKHLFHWENQPMKWAMRVRVALYLAQALDY-CSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 121 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
.-.|||||++ |..+..+.. ..++......++.+++..+.. +|..| ++|+||.+.|||++++ .+.++||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~----~~~~~~~~~~~~~~il~~~~~~~~~~g-ivHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKD----VDLSPEEPKELLEEILEEIIKMLHKAG-IVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHH----CGGGGSTHHHHHHHHHHHHHHHHHCTT-EEESS-STTSEEEETT-CEEE--G
T ss_pred ---CCEEEEEecCCCccchhhHHh----ccccchhHHHHHHHHHHHHHHHHHhcC-ceecCCChhhEEeecc-eEEEEec
Confidence 3479999998 666654432 122245567778888886655 57888 9999999999999977 9999999
Q ss_pred CCcccCC
Q 011349 198 GLMKNSR 204 (488)
Q Consensus 198 gla~~~~ 204 (488)
|.+....
T Consensus 151 ~qav~~~ 157 (188)
T PF01163_consen 151 GQAVDSS 157 (188)
T ss_dssp TTEEETT
T ss_pred CcceecC
Confidence 9887654
No 496
>KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=1.5e-10 Score=115.25 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+.-.+||..|.+|.++++|+.|+-.|++|++++|. +.++....|..+.++|+.++|+..|++|+.++|.++-..|.+|.
T Consensus 487 rhYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~-nsvi~~~~g~~~~~~k~~d~AL~~~~~A~~ld~kn~l~~~~~~~ 565 (638)
T KOG1126|consen 487 RHYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPS-NSVILCHIGRIQHQLKRKDKALQLYEKAIHLDPKNPLCKYHRAS 565 (638)
T ss_pred hhhHHHHhhhhheeccchhhHHHHHHHhhhcCCcc-chhHHhhhhHHHHHhhhhhHHHHHHHHHHhcCCCCchhHHHHHH
Confidence 66789999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+++.+++|++|+..+++.-++.|+.
T Consensus 566 il~~~~~~~eal~~LEeLk~~vP~e 590 (638)
T KOG1126|consen 566 ILFSLGRYVEALQELEELKELVPQE 590 (638)
T ss_pred HHHhhcchHHHHHHHHHHHHhCcch
Confidence 9999999999999999998888874
No 497
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.14 E-value=3.9e-10 Score=105.41 Aligned_cols=132 Identities=11% Similarity=0.065 Sum_probs=98.7
Q ss_pred eEEEEEeCCCcEEEEEEccCCCCC-----------ChHHHHHHHHHHhhcCCCCCc--ccccceec-----CCeeeEEEe
Q 011349 69 VVYKGLVDEDRWIAVKRFNRSAWP-----------DSRQFLEEARAVGLLRSERLV--NLIGCCCE-----GEERLLVAE 130 (488)
Q Consensus 69 ~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv--~~~~~~~~-----~~~~~lv~e 130 (488)
.|+++.+ +|+.|.||........ ....+.+|...+.++...+|. ..++++.. ...-+||||
T Consensus 37 rvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 4667666 6778999977543311 112488999999999655544 44555533 234789999
Q ss_pred cCCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-------CCCCeeccCCCccc
Q 011349 131 FMPNE-TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-------DGNPRLSCFGLMKN 202 (488)
Q Consensus 131 ~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-------~~~~kl~Dfgla~~ 202 (488)
++++. +|.+++......+.+...+..++.+++..+.-||..| |+|+|++++|||++. ++.+.|+||+.++.
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G-i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG-INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc-CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 99875 8988885333345667788899999999999999999 999999999999975 46789999998753
No 498
>COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion]
Probab=99.14 E-value=4.2e-10 Score=100.52 Aligned_cols=104 Identities=15% Similarity=0.020 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..+...+..+|..+++.|+|.+|+..+.+|..++|+ ++.+|+.+|.+|.++|++++|-..|.+|+++.|+.+.+..|+|
T Consensus 97 ~~d~~ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlg 175 (257)
T COG5010 97 PKDRELLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLG 175 (257)
T ss_pred cccHHHHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCchhhhhHH
Confidence 355566667999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
..|+-.|+++.|...+..+...-+.
T Consensus 176 ms~~L~gd~~~A~~lll~a~l~~~a 200 (257)
T COG5010 176 MSLLLRGDLEDAETLLLPAYLSPAA 200 (257)
T ss_pred HHHHHcCCHHHHHHHHHHHHhCCCC
Confidence 9999999999999999998765553
No 499
>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW. Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain.
Probab=99.14 E-value=4.7e-10 Score=103.04 Aligned_cols=104 Identities=10% Similarity=0.026 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC--CCCHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS--PDWPTAFYLQ 458 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~--p~~~~a~~~~ 458 (488)
..+..+...|..++..|++++|++.|+++++.+|. +..++.++|.++...|++++|+..++++++.. |.....++++
T Consensus 63 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l 141 (234)
T TIGR02521 63 DDYLAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLENA 141 (234)
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHHHH
Confidence 45678888999999999999999999999999998 88888999999999999999999999999864 5667889999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
|.++..+|++++|.+.|+++++.+|+.
T Consensus 142 ~~~~~~~g~~~~A~~~~~~~~~~~~~~ 168 (234)
T TIGR02521 142 GLCALKAGDFDKAEKYLTRALQIDPQR 168 (234)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 999999999999999999999998874
No 500
>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional
Probab=99.13 E-value=3.3e-10 Score=101.45 Aligned_cols=91 Identities=15% Similarity=0.148 Sum_probs=85.9
Q ss_pred hcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HhCCC--hHHH
Q 011349 395 RAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL-FGLGM--NNDA 471 (488)
Q Consensus 395 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~-~~~~~--~~~A 471 (488)
..++.++++..++++++.+|+ +...|.++|.+|..+|++++|+..|++|++++|+++.+++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 368889999999999999999 9999999999999999999999999999999999999999999986 67787 5999
Q ss_pred HHHHHHhhccccccc
Q 011349 472 QETLKDGTNLEAKKH 486 (488)
Q Consensus 472 ~~~~~~al~l~p~~~ 486 (488)
.+.++++++++|++.
T Consensus 130 ~~~l~~al~~dP~~~ 144 (198)
T PRK10370 130 REMIDKALALDANEV 144 (198)
T ss_pred HHHHHHHHHhCCCCh
Confidence 999999999999864
Done!