Query 011349
Match_columns 488
No_of_seqs 607 out of 4513
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 06:17:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 5.8E-59 2E-63 443.7 18.7 256 53-313 35-301 (307)
2 4gt4_A Tyrosine-protein kinase 100.0 2.7E-59 9.1E-64 448.0 14.9 251 54-310 26-304 (308)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-59 3.7E-64 448.7 12.0 253 55-313 14-290 (299)
4 4aoj_A High affinity nerve gro 100.0 3.2E-59 1.1E-63 451.6 14.9 252 56-313 43-320 (329)
5 4b9d_A Serine/threonine-protei 100.0 7.7E-59 2.6E-63 449.0 13.8 247 54-306 24-277 (350)
6 4fih_A Serine/threonine-protei 100.0 1.5E-58 5E-63 446.3 13.0 245 55-306 75-324 (346)
7 2pzi_A Probable serine/threoni 100.0 8.7E-58 3E-62 487.3 19.8 411 54-485 80-567 (681)
8 4g3f_A NF-kappa-beta-inducing 100.0 6.2E-58 2.1E-62 440.7 14.1 250 53-314 57-318 (336)
9 4fie_A Serine/threonine-protei 100.0 3.2E-57 1.1E-61 447.6 14.8 245 55-306 152-401 (423)
10 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.5E-58 2.6E-62 434.9 9.0 244 54-306 32-285 (311)
11 3hyh_A Carbon catabolite-derep 100.0 7.2E-57 2.5E-61 422.5 14.7 244 53-306 12-263 (275)
12 3fpq_A Serine/threonine-protei 100.0 4.8E-57 1.6E-61 427.4 12.7 244 57-306 29-283 (290)
13 4ase_A Vascular endothelial gr 100.0 1.7E-56 5.7E-61 436.0 11.9 257 52-313 62-348 (353)
14 3ubd_A Ribosomal protein S6 ki 100.0 4.4E-57 1.5E-61 429.7 6.2 244 54-306 24-282 (304)
15 3hmm_A TGF-beta receptor type- 100.0 1.7E-55 5.8E-60 422.5 12.0 251 56-314 5-299 (303)
16 4g31_A Eukaryotic translation 100.0 2E-54 6.9E-59 413.1 11.0 241 55-306 6-280 (299)
17 4b99_A Mitogen-activated prote 100.0 5.1E-52 1.7E-56 411.4 15.7 248 55-306 55-345 (398)
18 4f9c_A Cell division cycle 7-r 100.0 6.6E-51 2.3E-55 399.2 16.1 244 55-306 22-353 (361)
19 3v5w_A G-protein coupled recep 100.0 9.7E-51 3.3E-55 418.9 12.0 249 53-307 188-451 (689)
20 3uto_A Twitchin; kinase, muscl 100.0 1.1E-50 3.7E-55 421.2 12.4 249 54-306 157-411 (573)
21 2qkw_B Protein kinase; three-h 100.0 5.2E-49 1.8E-53 382.5 18.8 270 40-313 28-316 (321)
22 3uim_A Brassinosteroid insensi 100.0 3.4E-48 1.2E-52 377.6 17.3 273 34-310 13-309 (326)
23 3s95_A LIMK-1, LIM domain kina 100.0 4E-48 1.4E-52 374.3 14.0 256 54-314 10-284 (310)
24 2qol_A Ephrin receptor; recept 100.0 2.4E-48 8.2E-53 385.1 12.3 306 55-367 46-369 (373)
25 3p86_A Serine/threonine-protei 100.0 9.7E-48 3.3E-52 371.1 16.1 262 51-317 34-303 (309)
26 3fxz_A Serine/threonine-protei 100.0 4.3E-48 1.5E-52 371.7 13.2 247 53-306 19-270 (297)
27 2c30_A Serine/threonine-protei 100.0 5.8E-47 2E-51 367.8 19.1 263 39-308 23-297 (321)
28 3fe3_A MAP/microtubule affinit 100.0 9.8E-48 3.3E-52 373.8 13.0 246 52-306 13-265 (328)
29 4hcu_A Tyrosine-protein kinase 100.0 3.2E-47 1.1E-51 360.3 15.5 252 54-313 10-267 (269)
30 2psq_A Fibroblast growth facto 100.0 4.6E-47 1.6E-51 375.6 16.7 254 54-313 81-365 (370)
31 1o6l_A RAC-beta serine/threoni 100.0 4.3E-47 1.5E-51 370.3 15.8 245 54-307 5-262 (337)
32 3kul_A Ephrin type-A receptor 100.0 2.3E-47 7.8E-52 371.3 13.3 268 41-315 30-316 (325)
33 3zgw_A Maternal embryonic leuc 100.0 2.8E-47 9.6E-52 372.7 13.7 246 54-308 10-263 (347)
34 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.3E-47 1.5E-51 359.2 14.1 253 54-314 8-266 (268)
35 4eqm_A Protein kinase; transfe 100.0 8E-47 2.7E-51 362.3 16.0 257 55-315 12-278 (294)
36 2nru_A Interleukin-1 receptor- 100.0 9.7E-46 3.3E-50 357.0 22.0 272 37-312 11-306 (307)
37 3gen_A Tyrosine-protein kinase 100.0 1.1E-46 3.9E-51 359.2 15.0 252 54-313 24-281 (283)
38 2yab_A Death-associated protei 100.0 8E-47 2.7E-51 371.8 14.2 247 55-306 13-273 (361)
39 3cbl_A C-FES, proto-oncogene t 100.0 1.8E-47 6.3E-52 379.7 9.6 253 54-313 114-375 (377)
40 1k9a_A Carboxyl-terminal SRC k 100.0 1.5E-46 5E-51 381.6 16.4 252 53-313 192-446 (450)
41 3ugc_A Tyrosine-protein kinase 100.0 3.9E-47 1.3E-51 364.7 10.9 259 54-314 10-293 (295)
42 3soc_A Activin receptor type-2 100.0 3.6E-47 1.2E-51 369.6 10.7 255 54-314 24-320 (322)
43 1qcf_A Haematopoetic cell kina 100.0 9.5E-47 3.2E-51 383.6 14.0 252 55-314 189-446 (454)
44 3uc3_A Serine/threonine-protei 100.0 1.4E-46 4.7E-51 370.9 14.5 253 52-308 18-277 (361)
45 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-46 5.2E-51 385.7 15.1 253 54-313 220-479 (495)
46 2zv2_A Calcium/calmodulin-depe 100.0 2.3E-46 7.7E-51 360.0 14.8 246 53-306 12-293 (298)
47 1fot_A TPK1 delta, CAMP-depend 100.0 2.1E-46 7.3E-51 362.8 14.6 245 53-306 5-259 (318)
48 4fvq_A Tyrosine-protein kinase 100.0 3.2E-47 1.1E-51 364.1 8.7 255 54-316 8-279 (289)
49 3lb7_A RAF proto-oncogene seri 100.0 7.3E-46 2.5E-50 357.8 18.1 257 53-314 35-302 (307)
50 4dc2_A Protein kinase C IOTA t 100.0 1.8E-46 6.3E-51 372.6 14.2 250 52-306 50-319 (396)
51 1tki_A Titin; serine kinase, m 100.0 1E-46 3.6E-51 365.8 12.0 249 53-308 4-260 (321)
52 3dtc_A Mitogen-activated prote 100.0 2.7E-46 9.2E-51 354.3 14.3 251 52-310 5-271 (271)
53 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.2E-47 2.1E-51 371.6 10.1 245 53-306 22-281 (353)
54 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.5E-46 8.5E-51 380.1 14.2 252 55-314 185-442 (452)
55 2y0a_A Death-associated protei 100.0 4.4E-46 1.5E-50 362.4 15.2 246 56-306 13-272 (326)
56 3tt0_A Basic fibroblast growth 100.0 4.9E-46 1.7E-50 370.2 15.9 256 54-315 69-355 (382)
57 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-46 4.1E-51 372.3 11.3 254 55-314 72-347 (367)
58 4fr4_A YANK1, serine/threonine 100.0 3.4E-46 1.2E-50 369.4 14.5 249 52-306 13-272 (384)
59 2izr_A Casein kinase I isoform 100.0 5.6E-46 1.9E-50 362.5 15.4 256 55-317 10-286 (330)
60 3q4u_A Activin receptor type-1 100.0 2.7E-46 9.2E-51 359.8 13.0 248 55-310 9-300 (301)
61 3niz_A Rhodanese family protei 100.0 4.7E-46 1.6E-50 359.9 14.6 252 52-306 19-301 (311)
62 3kex_A Receptor tyrosine-prote 100.0 1.8E-46 6.3E-51 365.1 11.6 252 54-313 13-277 (325)
63 3tki_A Serine/threonine-protei 100.0 4.5E-46 1.6E-50 361.8 14.3 249 53-307 6-263 (323)
64 2eva_A TAK1 kinase - TAB1 chim 100.0 1.8E-45 6E-50 355.2 18.1 256 52-316 6-267 (307)
65 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.2E-46 7.6E-51 364.9 11.9 246 52-307 7-260 (336)
66 1luf_A Muscle-specific tyrosin 100.0 3.8E-46 1.3E-50 365.6 13.5 263 46-314 39-337 (343)
67 3soa_A Calcium/calmodulin-depe 100.0 1E-45 3.5E-50 373.2 16.7 248 55-307 12-269 (444)
68 3o0g_A Cell division protein k 100.0 8.1E-46 2.8E-50 355.0 15.1 250 54-306 2-283 (292)
69 3vhe_A Vascular endothelial gr 100.0 1.7E-46 5.8E-51 370.6 10.6 255 54-313 22-356 (359)
70 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.3E-46 1.5E-50 365.3 13.5 246 53-307 40-295 (350)
71 4euu_A Serine/threonine-protei 100.0 1.1E-45 3.6E-50 358.8 16.0 259 55-314 10-311 (319)
72 3t9t_A Tyrosine-protein kinase 100.0 7.5E-46 2.6E-50 350.3 14.5 253 53-313 7-265 (267)
73 3kmu_A ILK, integrin-linked ki 100.0 5.2E-46 1.8E-50 352.1 13.4 255 52-312 8-270 (271)
74 1xjd_A Protein kinase C, theta 100.0 2.7E-46 9.3E-51 365.7 11.4 246 52-306 15-270 (345)
75 3kfa_A Tyrosine-protein kinase 100.0 5.8E-46 2E-50 355.2 13.2 253 54-313 13-272 (288)
76 2ivs_A Proto-oncogene tyrosine 100.0 6.2E-46 2.1E-50 359.5 13.4 254 54-313 23-312 (314)
77 2bdw_A Hypothetical protein K1 100.0 1.3E-45 4.4E-50 364.0 15.9 248 55-307 30-286 (362)
78 4f0f_A Serine/threonine-protei 100.0 3E-45 1E-49 350.1 17.9 252 54-310 19-287 (287)
79 1kob_A Twitchin; kinase, intra 100.0 6.3E-46 2.1E-50 368.6 13.4 249 54-306 51-305 (387)
80 3poz_A Epidermal growth factor 100.0 5E-46 1.7E-50 362.3 12.0 251 55-313 16-279 (327)
81 1rjb_A FL cytokine receptor; k 100.0 6.5E-46 2.2E-50 364.2 12.7 256 54-314 45-336 (344)
82 3v8s_A RHO-associated protein 100.0 2.5E-46 8.6E-51 373.6 9.8 255 47-307 62-331 (410)
83 1ob3_A PFPK5, cell division co 100.0 1E-45 3.5E-50 353.6 13.6 250 54-306 2-281 (288)
84 1u5q_A Serine/threonine protei 100.0 6.8E-46 2.3E-50 364.0 12.4 246 56-308 56-308 (348)
85 1t46_A HOMO sapiens V-KIT hard 100.0 8.9E-46 3E-50 358.2 13.0 256 54-314 23-309 (313)
86 3lxl_A Tyrosine-protein kinase 100.0 2.8E-46 9.7E-51 364.2 9.5 259 55-315 24-306 (327)
87 2i0e_A Protein kinase C-beta I 100.0 7.2E-46 2.5E-50 363.8 12.4 245 53-306 19-277 (353)
88 3a8x_A Protein kinase C IOTA t 100.0 1.1E-45 3.9E-50 361.8 13.6 249 53-306 8-276 (345)
89 3qup_A Tyrosine-protein kinase 100.0 9.4E-46 3.2E-50 359.8 12.7 258 54-317 23-303 (323)
90 3gni_B Strad alpha; kinase fol 100.0 1.5E-45 5.2E-50 367.7 14.6 252 54-306 25-334 (389)
91 2x4f_A Myosin light chain kina 100.0 7.9E-46 2.7E-50 366.8 12.2 244 59-306 94-343 (373)
92 1mp8_A Focal adhesion kinase 1 100.0 1.2E-45 4E-50 351.9 12.8 252 54-313 15-277 (281)
93 1qpc_A LCK kinase; alpha beta 100.0 1.1E-45 3.8E-50 351.6 12.5 253 54-314 13-271 (279)
94 1mqb_A Ephrin type-A receptor 100.0 2.4E-45 8.2E-50 358.4 15.1 254 55-315 45-312 (333)
95 3a62_A Ribosomal protein S6 ki 100.0 1.7E-45 6E-50 358.4 13.8 245 54-307 17-278 (327)
96 3pls_A Macrophage-stimulating 100.0 7.4E-45 2.5E-49 349.2 17.7 253 57-315 24-290 (298)
97 3c0i_A Peripheral plasma membr 100.0 2.6E-45 8.9E-50 360.6 14.6 247 55-307 25-288 (351)
98 2w4o_A Calcium/calmodulin-depe 100.0 1.9E-45 6.5E-50 361.2 13.6 245 56-306 55-306 (349)
99 1csn_A Casein kinase-1; phosph 100.0 2E-45 6.9E-50 353.2 13.4 257 54-315 10-286 (298)
100 1nxk_A MAP kinase-activated pr 100.0 1.8E-45 6.3E-50 367.6 13.3 248 55-308 62-324 (400)
101 3og7_A AKAP9-BRAF fusion prote 100.0 2.9E-45 9.9E-50 350.6 14.0 254 54-312 24-288 (289)
102 2eue_A Carbon catabolite derep 100.0 4.1E-45 1.4E-49 347.0 15.0 245 52-306 11-263 (275)
103 2h8h_A Proto-oncogene tyrosine 100.0 1.5E-45 5.1E-50 381.7 12.9 252 55-314 268-525 (535)
104 4ejn_A RAC-alpha serine/threon 100.0 8E-46 2.7E-50 376.2 10.6 245 53-306 147-405 (446)
105 3lxp_A Non-receptor tyrosine-p 100.0 1.7E-45 5.7E-50 357.3 12.2 255 57-315 34-313 (318)
106 3dbq_A Dual specificity protei 100.0 2.7E-45 9.1E-50 359.6 13.7 247 54-308 9-276 (343)
107 2pvf_A Fibroblast growth facto 100.0 2.9E-45 9.9E-50 358.1 13.9 256 54-315 35-321 (334)
108 2pmi_A Negative RE, cyclin-dep 100.0 3.1E-45 1.1E-49 355.2 13.9 251 54-306 5-294 (317)
109 1byg_A CSK, protein (C-termina 100.0 1.5E-45 5E-50 350.6 11.4 252 53-313 20-274 (278)
110 3qd2_B Eukaryotic translation 100.0 2.4E-45 8.2E-50 358.0 12.9 244 55-306 7-326 (332)
111 3p1a_A MYT1 kinase, membrane-a 100.0 2.3E-45 7.8E-50 355.1 12.5 240 55-306 58-305 (311)
112 3g33_A Cell division protein k 100.0 8.5E-45 2.9E-49 350.7 16.4 251 54-306 9-297 (308)
113 3op5_A Serine/threonine-protei 100.0 1.5E-45 5E-50 364.5 11.2 259 54-318 35-335 (364)
114 2a19_B Interferon-induced, dou 100.0 2.3E-45 8E-50 350.1 12.2 245 56-315 13-277 (284)
115 2y94_A 5'-AMP-activated protei 100.0 4.2E-45 1.4E-49 371.1 14.9 244 54-306 16-267 (476)
116 3lzb_A Epidermal growth factor 100.0 2.6E-45 8.9E-50 357.1 12.8 252 54-313 15-279 (327)
117 3c1x_A Hepatocyte growth facto 100.0 5.9E-45 2E-49 360.4 15.5 253 56-315 91-358 (373)
118 3gxj_A TGF-beta receptor type- 100.0 2E-46 6.8E-51 361.0 4.8 252 55-314 4-299 (303)
119 4e5w_A Tyrosine-protein kinase 100.0 2.8E-45 9.7E-50 352.9 12.6 254 56-311 23-301 (302)
120 4aw2_A Serine/threonine-protei 100.0 1.2E-45 4.1E-50 371.4 10.4 252 53-307 73-340 (437)
121 1u59_A Tyrosine-protein kinase 100.0 3.5E-45 1.2E-49 349.7 13.1 255 55-317 10-277 (287)
122 3f66_A Hepatocyte growth facto 100.0 8.5E-45 2.9E-49 348.9 15.8 256 54-315 25-294 (298)
123 3ork_A Serine/threonine protei 100.0 1.7E-45 5.8E-50 356.0 10.5 252 54-310 12-279 (311)
124 2i1m_A Macrophage colony-stimu 100.0 1.2E-45 4E-50 360.7 9.3 257 52-313 44-327 (333)
125 1fvr_A Tyrosine-protein kinase 100.0 1.1E-44 3.7E-49 353.0 15.5 256 54-315 25-303 (327)
126 2a2a_A Death-associated protei 100.0 7.2E-45 2.5E-49 353.3 14.2 247 55-306 13-273 (321)
127 2wqm_A Serine/threonine-protei 100.0 6.1E-45 2.1E-49 352.0 13.3 264 51-317 29-302 (310)
128 2h34_A Serine/threonine-protei 100.0 1.1E-44 3.7E-49 350.1 15.0 261 48-314 28-298 (309)
129 2r5t_A Serine/threonine-protei 100.0 3.4E-45 1.2E-49 361.5 11.7 240 53-301 37-285 (373)
130 2v62_A Serine/threonine-protei 100.0 2.6E-45 8.8E-50 360.0 10.7 255 54-312 37-328 (345)
131 2acx_A G protein-coupled recep 100.0 3E-45 1E-49 377.3 11.6 250 54-306 184-445 (576)
132 2zmd_A Dual specificity protei 100.0 7.9E-45 2.7E-49 362.0 14.1 245 55-307 57-322 (390)
133 2buj_A Serine/threonine-protei 100.0 7.1E-45 2.4E-49 352.6 13.4 257 54-314 29-308 (317)
134 3llt_A Serine/threonine kinase 100.0 4.5E-45 1.5E-49 360.5 12.0 262 39-306 23-356 (360)
135 2jam_A Calcium/calmodulin-depe 100.0 1.5E-44 5.2E-49 348.2 15.2 248 55-307 10-263 (304)
136 3dls_A PAS domain-containing s 100.0 1.3E-44 4.3E-49 353.3 14.8 252 41-307 10-276 (335)
137 3mdy_A Bone morphogenetic prot 100.0 1.4E-44 4.7E-49 353.6 15.0 253 55-315 38-334 (337)
138 3rp9_A Mitogen-activated prote 100.0 1.5E-44 5.3E-49 368.2 16.0 249 54-306 53-397 (458)
139 3f3z_A Calcium/calmodulin-depe 100.0 8.4E-45 2.9E-49 345.2 13.0 242 55-306 10-262 (277)
140 2ozo_A Tyrosine-protein kinase 100.0 1.8E-44 6.2E-49 378.9 16.7 246 61-314 343-600 (613)
141 2w1i_A JAK2; chromosomal rearr 100.0 6.1E-45 2.1E-49 354.6 12.2 257 55-313 42-323 (326)
142 2vd5_A DMPK protein; serine/th 100.0 2.2E-45 7.6E-50 367.0 9.3 252 52-307 59-329 (412)
143 3cc6_A Protein tyrosine kinase 100.0 8E-45 2.7E-49 346.1 12.7 251 54-312 12-273 (281)
144 3kk8_A Calcium/calmodulin depe 100.0 1.5E-44 5.1E-49 344.7 14.3 249 54-307 6-263 (284)
145 3cok_A Serine/threonine-protei 100.0 1.2E-44 4.1E-49 344.3 13.6 248 51-306 8-263 (278)
146 2ac3_A MAP kinase-interacting 100.0 9E-45 3.1E-49 351.8 12.9 247 55-306 13-296 (316)
147 3brb_A Proto-oncogene tyrosine 100.0 1.8E-44 6.1E-49 349.2 14.9 255 54-314 34-310 (313)
148 1x8b_A WEE1HU, WEE1-like prote 100.0 8.3E-45 2.8E-49 346.9 12.4 243 55-306 12-280 (289)
149 2qr7_A Ribosomal protein S6 ki 100.0 5.1E-45 1.7E-49 356.7 11.2 246 55-308 23-280 (342)
150 3kn6_A Ribosomal protein S6 ki 100.0 5.8E-45 2E-49 354.3 11.5 240 60-306 17-271 (325)
151 3fdn_A Serine/threonine-protei 100.0 6.8E-45 2.3E-49 346.2 11.8 246 53-307 8-259 (279)
152 2xir_A Vascular endothelial gr 100.0 6E-45 2.1E-49 352.9 11.3 257 53-314 26-312 (316)
153 1xbb_A Tyrosine-protein kinase 100.0 8.7E-45 3E-49 347.7 12.0 251 54-313 16-280 (291)
154 1p4o_A Insulin-like growth fac 100.0 8E-45 2.7E-49 353.0 11.7 252 55-312 26-299 (322)
155 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-44 3.7E-49 372.3 13.0 251 53-306 184-449 (543)
156 4agu_A Cyclin-dependent kinase 100.0 1.9E-44 6.4E-49 348.7 13.9 250 54-306 3-285 (311)
157 3oz6_A Mitogen-activated prote 100.0 8.6E-45 2.9E-49 362.1 11.7 248 54-306 9-329 (388)
158 3g2f_A Bone morphogenetic prot 100.0 9.8E-45 3.4E-49 354.6 11.5 258 51-316 10-322 (336)
159 2jii_A Serine/threonine-protei 100.0 5.5E-45 1.9E-49 358.7 9.8 257 54-317 42-341 (352)
160 3hko_A Calcium/calmodulin-depe 100.0 9E-45 3.1E-49 356.2 11.0 246 56-306 28-331 (345)
161 3i6u_A CDS1, serine/threonine- 100.0 4.2E-44 1.4E-48 360.2 15.9 244 55-306 136-400 (419)
162 3is5_A Calcium-dependent prote 100.0 3.9E-44 1.3E-48 342.1 14.9 246 56-306 24-279 (285)
163 3ttj_A Mitogen-activated prote 100.0 4.6E-44 1.6E-48 363.9 16.3 248 54-307 62-357 (464)
164 3a7i_A MST3 kinase, serine/thr 100.0 2.7E-44 9.2E-49 346.3 13.4 244 56-308 24-273 (303)
165 1cm8_A Phosphorylated MAP kina 100.0 4.6E-44 1.6E-48 353.7 15.4 248 54-306 25-308 (367)
166 4aaa_A Cyclin-dependent kinase 100.0 1.5E-44 5.2E-49 352.5 11.8 252 52-306 23-307 (331)
167 2vgo_A Serine/threonine-protei 100.0 3E-44 1E-48 342.6 13.6 247 52-307 12-264 (284)
168 2yex_A Serine/threonine-protei 100.0 6.5E-44 2.2E-48 338.7 15.3 246 55-306 8-262 (276)
169 2clq_A Mitogen-activated prote 100.0 6E-44 2.1E-48 342.4 15.1 247 56-306 24-279 (295)
170 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.5E-44 5.2E-49 352.2 11.1 252 51-306 31-319 (329)
171 2x7f_A TRAF2 and NCK-interacti 100.0 7.9E-45 2.7E-49 353.7 9.0 248 53-306 23-287 (326)
172 3mtl_A Cell division protein k 100.0 9.7E-45 3.3E-49 352.8 9.5 251 54-307 2-283 (324)
173 3eqc_A Dual specificity mitoge 100.0 1E-44 3.5E-49 358.0 9.7 251 54-307 33-326 (360)
174 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.1E-44 2.1E-48 353.0 15.1 246 54-313 65-340 (365)
175 2yfx_A Tyrosine-protein kinase 100.0 2.8E-44 9.7E-49 350.0 12.5 255 54-314 30-306 (327)
176 3uzp_A CKI-delta, CKID, casein 100.0 3.5E-44 1.2E-48 344.2 12.8 257 54-316 9-284 (296)
177 2wtk_C Serine/threonine-protei 100.0 1.4E-43 4.8E-48 341.5 17.1 246 54-307 5-265 (305)
178 3pfq_A PKC-B, PKC-beta, protei 100.0 4.9E-44 1.7E-48 379.1 15.1 246 52-306 339-598 (674)
179 1vzo_A Ribosomal protein S6 ki 100.0 7.9E-45 2.7E-49 357.8 8.4 250 54-308 54-324 (355)
180 4eut_A Serine/threonine-protei 100.0 2E-44 6.8E-49 360.2 11.3 259 55-314 10-311 (396)
181 3lm5_A Serine/threonine-protei 100.0 3.1E-44 1.1E-48 349.7 12.3 249 56-307 30-289 (327)
182 3bhy_A Death-associated protei 100.0 3.3E-44 1.1E-48 342.1 12.0 254 55-313 6-275 (283)
183 3mwu_A Calmodulin-domain prote 100.0 7.3E-44 2.5E-48 365.7 15.3 247 55-307 23-278 (486)
184 4fl3_A Tyrosine-protein kinase 100.0 2.1E-44 7.2E-49 379.3 11.5 244 60-312 375-631 (635)
185 3ll6_A Cyclin G-associated kin 100.0 5.8E-44 2E-48 349.0 13.7 252 55-315 29-311 (337)
186 3nyv_A Calmodulin-domain prote 100.0 3.9E-44 1.3E-48 367.8 12.9 245 55-307 27-283 (484)
187 2owb_A Serine/threonine-protei 100.0 7.6E-44 2.6E-48 348.1 14.4 244 54-306 41-292 (335)
188 3mi9_A Cell division protein k 100.0 1.6E-43 5.3E-48 348.2 16.7 253 52-307 15-313 (351)
189 3q60_A ROP5B; pseudokinase, tr 100.0 8.9E-45 3.1E-49 359.8 7.6 248 56-306 64-353 (371)
190 1ua2_A CAK, cell division prot 100.0 1.2E-43 4.2E-48 348.2 15.6 253 53-308 9-294 (346)
191 1b6c_B TGF-B superfamily recep 100.0 4.4E-44 1.5E-48 350.8 12.3 251 56-314 44-338 (342)
192 2w5a_A Serine/threonine-protei 100.0 3.1E-44 1.1E-48 341.5 10.9 254 53-311 5-273 (279)
193 2j7t_A Serine/threonine-protei 100.0 3.8E-44 1.3E-48 345.0 11.3 247 55-306 20-276 (302)
194 3n9x_A Phosphotransferase; mal 100.0 4.4E-44 1.5E-48 361.6 12.3 249 54-306 26-362 (432)
195 3byv_A Rhoptry kinase; malaria 100.0 3.2E-45 1.1E-49 363.7 3.9 240 54-306 73-360 (377)
196 1u46_A ACK-1, activated CDC42 100.0 3.1E-44 1E-48 343.7 10.4 253 54-313 18-285 (291)
197 3lij_A Calcium/calmodulin depe 100.0 8.1E-44 2.8E-48 366.0 14.1 246 55-306 38-292 (494)
198 3com_A Serine/threonine-protei 100.0 1.9E-43 6.6E-48 342.0 15.9 247 53-306 28-279 (314)
199 4hgt_A Casein kinase I isoform 100.0 5.5E-44 1.9E-48 342.7 11.8 256 55-316 10-284 (296)
200 2h6d_A 5'-AMP-activated protei 100.0 9.8E-44 3.4E-48 337.6 13.4 244 54-306 11-262 (276)
201 2fst_X Mitogen-activated prote 100.0 4.2E-44 1.4E-48 353.7 11.2 248 54-306 29-312 (367)
202 3kvw_A DYRK2, dual specificity 100.0 6.2E-44 2.1E-48 359.9 12.7 250 55-307 98-410 (429)
203 3nsz_A CK II alpha, casein kin 100.0 2.6E-43 8.9E-48 343.6 16.7 244 54-306 36-320 (330)
204 1t4h_A Serine/threonine-protei 100.0 9.9E-44 3.4E-48 340.1 13.3 246 55-306 27-283 (290)
205 2vwi_A Serine/threonine-protei 100.0 5.1E-44 1.7E-48 344.1 11.3 253 53-306 14-288 (303)
206 2y4i_B KSR2, HKSR2, kinase sup 100.0 9.4E-44 3.2E-48 345.0 13.0 255 52-315 31-305 (319)
207 2rku_A Serine/threonine-protei 100.0 2.3E-43 7.9E-48 338.3 15.4 245 54-307 15-267 (294)
208 3q5i_A Protein kinase; CDPK, m 100.0 9.3E-44 3.2E-48 366.5 13.5 246 54-307 36-303 (504)
209 2pml_X PFPK7, Ser/Thr protein 100.0 1.1E-43 3.7E-48 348.9 13.0 251 54-306 31-323 (348)
210 2y7j_A Phosphorylase B kinase 100.0 1.5E-43 5E-48 350.0 13.8 245 55-306 95-360 (365)
211 2r3i_A Cell division protein k 100.0 3.1E-43 1.1E-47 338.1 15.2 252 53-306 2-284 (299)
212 3eb0_A Putative uncharacterize 100.0 5.6E-44 1.9E-48 355.5 10.2 247 54-306 7-322 (383)
213 2xrw_A Mitogen-activated prote 100.0 2.8E-43 9.6E-48 348.9 14.7 248 54-307 25-320 (371)
214 3fme_A Dual specificity mitoge 100.0 1E-43 3.5E-48 339.9 10.8 248 54-306 7-267 (290)
215 3pg1_A Mitogen-activated prote 100.0 2.3E-43 8E-48 348.5 13.4 259 42-306 13-317 (362)
216 2ycf_A Serine/threonine-protei 100.0 2.1E-43 7.3E-48 343.1 12.6 244 55-306 11-275 (322)
217 1j1b_A Glycogen synthase kinas 100.0 7.8E-44 2.7E-48 358.3 9.3 247 55-307 55-338 (420)
218 1phk_A Phosphorylase kinase; g 100.0 3.2E-43 1.1E-47 337.9 12.9 251 51-306 14-284 (298)
219 3sv0_A Casein kinase I-like; t 100.0 3.4E-43 1.2E-47 357.8 13.7 255 54-314 7-280 (483)
220 3qyz_A Mitogen-activated prote 100.0 1.7E-43 5.7E-48 349.7 10.9 248 55-307 28-315 (364)
221 3an0_A Dual specificity mitoge 100.0 1.1E-43 3.8E-48 347.7 9.5 250 53-307 50-312 (340)
222 4e7w_A Glycogen synthase kinas 100.0 2.1E-43 7.2E-48 352.3 11.6 246 55-306 41-322 (394)
223 1wak_A Serine/threonine-protei 100.0 9.7E-44 3.3E-48 355.5 9.0 250 54-306 37-392 (397)
224 1z57_A Dual specificity protei 100.0 5.9E-43 2E-47 342.0 14.0 250 54-306 14-329 (339)
225 1zy4_A Serine/threonine-protei 100.0 4.6E-43 1.6E-47 337.2 12.8 245 55-306 7-284 (303)
226 3fhr_A MAP kinase-activated pr 100.0 3E-43 1E-47 343.9 11.7 249 55-308 29-290 (336)
227 3aln_A Dual specificity mitoge 100.0 7.8E-43 2.7E-47 339.8 13.9 253 53-307 21-287 (327)
228 2i6l_A Mitogen-activated prote 100.0 3.5E-43 1.2E-47 340.9 11.1 248 54-306 11-306 (320)
229 1blx_A Cyclin-dependent kinase 100.0 1.2E-42 4.1E-47 338.2 15.0 251 54-306 11-297 (326)
230 2j0j_A Focal adhesion kinase 1 100.0 6.5E-43 2.2E-47 369.3 13.8 252 54-313 390-652 (656)
231 3cek_A Dual specificity protei 100.0 1E-42 3.4E-47 336.9 13.0 246 54-307 28-294 (313)
232 4exu_A Mitogen-activated prote 100.0 1.4E-42 4.6E-47 344.0 14.2 246 55-306 43-324 (371)
233 3rgf_A Cyclin-dependent kinase 100.0 1.7E-42 5.8E-47 347.4 14.8 245 60-308 27-336 (405)
234 1q8y_A SR protein kinase; tran 100.0 9.9E-43 3.4E-47 345.4 12.3 251 54-307 19-335 (373)
235 3e3p_A Protein kinase, putativ 100.0 1.7E-42 5.8E-47 342.0 13.8 250 54-306 23-315 (360)
236 2b9h_A MAP kinase FUS3, mitoge 100.0 1.9E-42 6.5E-47 340.8 13.9 248 54-306 11-306 (353)
237 3coi_A Mitogen-activated prote 100.0 5.5E-42 1.9E-46 337.5 16.8 247 54-306 24-306 (353)
238 2wei_A Calmodulin-domain prote 100.0 1.3E-42 4.4E-47 331.9 11.9 244 55-306 23-277 (287)
239 2vx3_A Dual specificity tyrosi 100.0 3.1E-42 1.1E-46 342.8 14.6 196 54-252 54-261 (382)
240 3a99_A Proto-oncogene serine/t 100.0 9E-43 3.1E-47 338.3 9.9 240 52-306 41-294 (320)
241 2iwi_A Serine/threonine-protei 100.0 1.5E-42 5.1E-47 335.5 10.4 239 54-307 31-285 (312)
242 2eu9_A Dual specificity protei 100.0 4.4E-42 1.5E-46 338.1 13.3 250 54-306 19-334 (355)
243 2rio_A Serine/threonine-protei 100.0 1.6E-42 5.6E-47 350.2 10.3 244 57-307 18-297 (434)
244 3qa8_A MGC80376 protein; kinas 100.0 6E-42 2.1E-46 356.1 11.6 251 53-304 13-296 (676)
245 2dyl_A Dual specificity mitoge 100.0 1.4E-41 4.9E-46 329.4 12.6 250 52-306 23-284 (318)
246 3p23_A Serine/threonine-protei 100.0 1.6E-41 5.5E-46 342.0 12.8 243 55-306 25-284 (432)
247 3uqc_A Probable conserved tran 100.0 4.9E-41 1.7E-45 320.4 13.9 231 54-314 31-267 (286)
248 3m2w_A MAP kinase-activated pr 100.0 1.3E-40 4.4E-45 320.0 13.8 228 55-308 18-259 (299)
249 2vuw_A Serine/threonine-protei 100.0 5.3E-41 1.8E-45 328.1 5.2 241 54-306 20-332 (336)
250 3dzo_A Rhoptry kinase domain; 100.0 3.2E-40 1.1E-44 331.3 8.7 238 56-306 80-364 (413)
251 4azs_A Methyltransferase WBDD; 100.0 2.4E-34 8.2E-39 298.5 5.8 180 61-247 241-436 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 9.2E-29 3.1E-33 255.2 7.0 175 60-248 342-537 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2.8E-26 9.4E-31 217.4 6.1 155 45-223 81-253 (282)
254 1zth_A RIO1 serine protein kin 99.9 5.4E-22 1.9E-26 185.6 10.0 149 43-203 36-219 (258)
255 4gco_A Protein STI-1; structur 99.9 5.3E-21 1.8E-25 158.2 13.2 105 381-486 11-115 (126)
256 2hr2_A Hypothetical protein; a 99.8 1.8E-20 6.1E-25 158.2 11.2 107 380-486 8-136 (159)
257 3gyz_A Chaperone protein IPGC; 99.8 5.7E-19 2E-23 150.5 12.9 105 380-485 33-137 (151)
258 4gcn_A Protein STI-1; structur 99.8 9.8E-19 3.4E-23 144.7 11.7 104 380-484 5-115 (127)
259 4gyi_A RIO2 kinase; protein ki 99.8 2.5E-19 8.6E-24 174.0 7.5 148 45-203 86-265 (397)
260 3rkv_A Putative peptidylprolyl 99.8 2.4E-18 8E-23 148.7 11.2 108 378-486 6-131 (162)
261 3upv_A Heat shock protein STI1 99.8 9E-18 3.1E-22 138.4 12.8 101 381-482 2-102 (126)
262 2vgx_A Chaperone SYCD; alterna 99.7 3.1E-17 1E-21 139.6 13.0 106 380-486 18-123 (148)
263 3sz7_A HSC70 cochaperone (SGT) 99.7 3.9E-17 1.3E-21 141.3 13.4 107 380-487 8-114 (164)
264 4ga2_A E3 SUMO-protein ligase 99.7 1.7E-17 5.7E-22 141.6 10.0 106 380-486 28-134 (150)
265 2xcb_A PCRH, regulatory protei 99.7 7.5E-17 2.6E-21 136.0 12.8 106 380-486 15-120 (142)
266 1hxi_A PEX5, peroxisome target 99.7 6.7E-17 2.3E-21 132.4 10.6 101 385-486 19-119 (121)
267 3q49_B STIP1 homology and U bo 99.7 7.4E-16 2.5E-20 128.4 12.0 102 382-484 8-109 (137)
268 3urz_A Uncharacterized protein 99.6 1E-15 3.6E-20 137.9 10.3 103 383-486 4-122 (208)
269 4gyw_A UDP-N-acetylglucosamine 99.6 1.6E-15 5.6E-20 161.0 13.5 105 381-486 41-145 (723)
270 2fbn_A 70 kDa peptidylprolyl i 99.6 3.6E-15 1.2E-19 133.1 13.4 109 377-486 32-156 (198)
271 1zu2_A Mitochondrial import re 99.6 2.9E-16 9.9E-21 132.2 5.6 91 394-485 13-124 (158)
272 1elw_A TPR1-domain of HOP; HOP 99.6 6.1E-15 2.1E-19 118.7 13.1 104 382-486 3-106 (118)
273 1p5q_A FKBP52, FK506-binding p 99.6 3.5E-15 1.2E-19 145.0 13.7 107 379-486 143-264 (336)
274 2lni_A Stress-induced-phosphop 99.6 6E-15 2.1E-19 121.7 13.0 105 381-486 14-118 (133)
275 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 3.3E-15 1.1E-19 151.4 13.5 107 379-486 264-385 (457)
276 4ga2_A E3 SUMO-protein ligase 99.6 6E-16 2.1E-20 131.8 5.8 97 389-486 3-99 (150)
277 2c2l_A CHIP, carboxy terminus 99.6 4.4E-15 1.5E-19 140.5 11.5 104 382-486 3-106 (281)
278 2dba_A Smooth muscle cell asso 99.6 9.7E-15 3.3E-19 123.0 12.0 104 382-486 27-133 (148)
279 3vtx_A MAMA; tetratricopeptide 99.6 1.1E-14 3.7E-19 128.0 12.7 105 381-486 71-175 (184)
280 1a17_A Serine/threonine protei 99.6 2E-14 6.9E-19 123.5 13.9 107 379-486 9-115 (166)
281 2pl2_A Hypothetical conserved 99.6 5E-15 1.7E-19 134.4 10.5 105 381-486 3-118 (217)
282 4gyw_A UDP-N-acetylglucosamine 99.6 7.1E-15 2.4E-19 156.1 13.2 103 381-484 75-177 (723)
283 2xev_A YBGF; tetratricopeptide 99.6 9.6E-15 3.3E-19 120.2 11.0 101 384-485 3-109 (129)
284 2kck_A TPR repeat; tetratricop 99.6 8.6E-15 2.9E-19 116.7 10.4 103 383-486 6-111 (112)
285 2if4_A ATFKBP42; FKBP-like, al 99.6 4.6E-15 1.6E-19 144.2 10.5 109 377-486 173-298 (338)
286 2h6f_A Protein farnesyltransfe 99.6 3.2E-15 1.1E-19 147.3 9.2 104 381-485 129-233 (382)
287 1ihg_A Cyclophilin 40; ppiase 99.6 6.4E-15 2.2E-19 144.8 11.2 109 377-486 217-341 (370)
288 3urz_A Uncharacterized protein 99.6 1.4E-14 4.7E-19 130.6 12.3 96 389-485 60-190 (208)
289 4i17_A Hypothetical protein; T 99.6 1.3E-14 4.5E-19 132.3 11.9 104 382-486 6-110 (228)
290 2vyi_A SGTA protein; chaperone 99.6 4E-14 1.4E-18 116.0 13.5 106 380-486 9-114 (131)
291 2h6f_A Protein farnesyltransfe 99.6 9.3E-15 3.2E-19 144.0 11.3 105 381-486 95-200 (382)
292 1elr_A TPR2A-domain of HOP; HO 99.5 3.7E-14 1.3E-18 116.3 11.3 103 381-484 2-111 (131)
293 3k9i_A BH0479 protein; putativ 99.5 4.5E-15 1.5E-19 120.5 5.5 91 395-486 2-95 (117)
294 2pl2_A Hypothetical conserved 99.5 3.4E-14 1.1E-18 128.9 11.4 103 381-485 71-184 (217)
295 3vtx_A MAMA; tetratricopeptide 99.5 8.1E-14 2.8E-18 122.4 12.7 104 381-485 37-140 (184)
296 4i17_A Hypothetical protein; T 99.5 1.1E-13 3.8E-18 126.1 13.3 103 381-484 40-149 (228)
297 1hh8_A P67PHOX, NCF-2, neutrop 99.5 1.5E-13 5.2E-18 123.5 13.2 103 382-485 36-154 (213)
298 1na0_A Designed protein CTPR3; 99.5 2.5E-13 8.6E-18 110.2 13.3 104 382-486 8-111 (125)
299 2e2e_A Formate-dependent nitri 99.5 1.2E-13 4E-18 120.6 12.1 105 381-486 42-149 (177)
300 2l6j_A TPR repeat-containing p 99.5 1.5E-14 5E-19 115.6 4.9 96 382-478 3-104 (111)
301 1wao_1 Serine/threonine protei 99.5 2.9E-14 9.9E-19 145.1 6.8 105 381-486 4-108 (477)
302 3tm0_A Aminoglycoside 3'-phosp 99.5 1.2E-13 4.2E-18 129.1 10.4 137 56-201 16-212 (263)
303 3gyz_A Chaperone protein IPGC; 99.4 4.8E-14 1.6E-18 119.9 5.2 84 402-486 21-104 (151)
304 1xnf_A Lipoprotein NLPI; TPR, 99.4 6.9E-13 2.3E-17 123.8 13.3 106 380-486 40-145 (275)
305 1hh8_A P67PHOX, NCF-2, neutrop 99.4 8.8E-13 3E-17 118.5 13.4 102 381-486 4-105 (213)
306 3uq3_A Heat shock protein STI1 99.4 1.2E-12 4E-17 120.8 12.8 102 380-482 136-237 (258)
307 2kat_A Uncharacterized protein 99.4 4.2E-13 1.4E-17 108.2 8.3 85 400-485 2-86 (115)
308 3qky_A Outer membrane assembly 99.4 8.1E-13 2.8E-17 123.1 11.4 105 381-486 13-131 (261)
309 2pzi_A Probable serine/threoni 99.4 2.8E-13 9.6E-18 144.1 8.6 105 380-486 430-534 (681)
310 2kc7_A BFR218_protein; tetratr 99.4 5E-13 1.7E-17 104.5 7.9 93 386-487 3-96 (99)
311 2yhc_A BAMD, UPF0169 lipoprote 99.4 1.6E-12 5.3E-17 118.5 11.4 105 382-486 3-130 (225)
312 2fo7_A Synthetic consensus TPR 99.4 4.1E-12 1.4E-16 104.2 12.9 102 382-484 34-135 (136)
313 2fo7_A Synthetic consensus TPR 99.4 3.8E-12 1.3E-16 104.4 12.5 101 384-485 2-102 (136)
314 4gco_A Protein STI-1; structur 99.4 1.6E-12 5.4E-17 106.9 9.7 82 380-462 44-125 (126)
315 4eqf_A PEX5-related protein; a 99.4 2E-12 6.7E-17 126.5 11.4 103 382-485 212-314 (365)
316 4eqf_A PEX5-related protein; a 99.4 1.6E-12 5.3E-17 127.2 10.7 104 382-486 64-167 (365)
317 3as5_A MAMA; tetratricopeptide 99.4 4.3E-12 1.5E-16 110.4 12.3 105 381-486 74-178 (186)
318 2vsy_A XCC0866; transferase, g 99.4 3.2E-12 1.1E-16 133.2 13.1 104 381-485 55-161 (568)
319 3ieg_A DNAJ homolog subfamily 99.3 4.2E-12 1.4E-16 123.0 12.3 101 382-483 2-102 (359)
320 1na3_A Designed protein CTPR2; 99.3 6E-12 2E-16 96.3 10.7 85 381-466 7-91 (91)
321 2gw1_A Mitochondrial precursor 99.3 6.1E-12 2.1E-16 128.5 13.6 105 379-485 2-106 (514)
322 4abn_A Tetratricopeptide repea 99.3 1.9E-12 6.3E-17 131.8 9.5 103 383-486 170-292 (474)
323 2r5s_A Uncharacterized protein 99.3 5.2E-12 1.8E-16 110.2 11.0 105 379-485 36-141 (176)
324 3as5_A MAMA; tetratricopeptide 99.3 1.1E-11 3.8E-16 107.7 13.1 103 382-485 41-143 (186)
325 3qou_A Protein YBBN; thioredox 99.3 5.8E-12 2E-16 119.3 11.8 104 381-485 149-252 (287)
326 4abn_A Tetratricopeptide repea 99.3 2.3E-12 7.9E-17 131.1 9.6 104 381-486 100-213 (474)
327 2q7f_A YRRB protein; TPR, prot 99.3 8.6E-12 2.9E-16 114.0 11.9 105 381-486 123-227 (243)
328 3ma5_A Tetratricopeptide repea 99.3 3.9E-12 1.3E-16 99.9 8.1 73 412-485 2-74 (100)
329 2q7f_A YRRB protein; TPR, prot 99.3 1.1E-11 3.7E-16 113.3 12.3 102 382-484 90-191 (243)
330 3qky_A Outer membrane assembly 99.3 6.3E-12 2.1E-16 117.0 10.8 103 383-485 52-181 (261)
331 3fp2_A TPR repeat-containing p 99.3 5.5E-12 1.9E-16 129.7 11.4 107 378-486 20-126 (537)
332 1fch_A Peroxisomal targeting s 99.3 7.1E-12 2.4E-16 122.3 11.6 103 382-485 216-318 (368)
333 2vgx_A Chaperone SYCD; alterna 99.3 1.7E-12 5.7E-17 110.0 6.1 84 402-486 6-89 (148)
334 2y4t_A DNAJ homolog subfamily 99.3 1.4E-11 4.9E-16 123.7 13.7 106 380-486 23-128 (450)
335 1nd4_A Aminoglycoside 3'-phosp 99.3 7.5E-12 2.6E-16 116.6 10.8 126 63-201 29-213 (264)
336 1fch_A Peroxisomal targeting s 99.3 1.4E-11 4.9E-16 120.1 13.2 103 383-486 64-166 (368)
337 3uq3_A Heat shock protein STI1 99.3 1.3E-11 4.3E-16 113.7 12.1 103 383-486 79-207 (258)
338 2vq2_A PILW, putative fimbrial 99.3 2.5E-11 8.4E-16 109.3 13.7 104 381-485 40-146 (225)
339 1qqe_A Vesicular transport pro 99.3 7.3E-12 2.5E-16 118.9 10.7 106 381-486 115-233 (292)
340 3u4t_A TPR repeat-containing p 99.3 6.7E-12 2.3E-16 117.0 9.9 104 381-486 35-142 (272)
341 3u4t_A TPR repeat-containing p 99.3 8.8E-12 3E-16 116.2 10.6 98 383-482 108-209 (272)
342 2ho1_A Type 4 fimbrial biogene 99.3 2E-11 6.8E-16 112.5 12.8 101 383-484 105-207 (252)
343 2ho1_A Type 4 fimbrial biogene 99.3 1.8E-11 6E-16 112.8 12.3 104 381-485 69-174 (252)
344 1w3b_A UDP-N-acetylglucosamine 99.3 1.8E-11 6.3E-16 120.7 13.0 103 382-485 270-372 (388)
345 1w3b_A UDP-N-acetylglucosamine 99.3 1.5E-11 5.3E-16 121.2 12.4 104 381-485 235-338 (388)
346 3dxp_A Putative acyl-COA dehyd 99.3 2.2E-11 7.5E-16 119.2 12.9 159 39-202 19-248 (359)
347 3mkr_A Coatomer subunit epsilo 99.3 1.8E-11 6.2E-16 116.1 11.7 93 393-486 176-269 (291)
348 1p5q_A FKBP52, FK506-binding p 99.3 1.4E-11 4.9E-16 119.4 11.0 99 382-481 195-294 (336)
349 1qqe_A Vesicular transport pro 99.3 1.1E-11 3.9E-16 117.5 9.7 106 381-486 75-192 (292)
350 3ieg_A DNAJ homolog subfamily 99.3 5E-11 1.7E-15 115.3 14.2 105 381-486 232-340 (359)
351 2vsy_A XCC0866; transferase, g 99.3 2.5E-11 8.5E-16 126.4 12.6 104 381-485 21-124 (568)
352 3cv0_A Peroxisome targeting si 99.3 3.4E-11 1.2E-15 115.1 12.5 102 382-484 171-272 (327)
353 3hym_B Cell division cycle pro 99.2 1.7E-11 5.7E-16 117.4 10.3 105 381-486 191-304 (330)
354 2vq2_A PILW, putative fimbrial 99.2 4.3E-11 1.5E-15 107.7 11.9 100 383-483 76-178 (225)
355 2yhc_A BAMD, UPF0169 lipoprote 99.2 1.9E-11 6.4E-16 111.2 9.5 102 383-485 41-180 (225)
356 4gcn_A Protein STI-1; structur 99.2 1.5E-11 5E-16 101.2 7.9 70 417-486 7-76 (127)
357 1a17_A Serine/threonine protei 99.2 3.6E-11 1.2E-15 102.9 10.7 101 381-482 45-147 (166)
358 1xnf_A Lipoprotein NLPI; TPR, 99.2 6.1E-11 2.1E-15 110.4 13.0 103 382-485 76-248 (275)
359 3cv0_A Peroxisome targeting si 99.2 6E-11 2E-15 113.3 13.2 104 382-486 20-123 (327)
360 2e2e_A Formate-dependent nitri 99.2 4.3E-12 1.5E-16 110.6 4.7 97 389-486 16-115 (177)
361 3hym_B Cell division cycle pro 99.2 5.8E-11 2E-15 113.6 12.8 103 381-484 123-225 (330)
362 2xcb_A PCRH, regulatory protei 99.2 1.4E-11 4.8E-16 103.4 7.3 82 404-486 5-86 (142)
363 1wao_1 Serine/threonine protei 99.2 9.3E-12 3.2E-16 126.6 7.3 104 381-485 38-154 (477)
364 3mkr_A Coatomer subunit epsilo 99.2 6.9E-11 2.4E-15 112.1 11.6 105 381-486 128-234 (291)
365 2y4t_A DNAJ homolog subfamily 99.2 1.3E-10 4.3E-15 116.7 14.1 104 382-486 256-363 (450)
366 2lni_A Stress-induced-phosphop 99.2 1.9E-10 6.4E-15 94.3 11.1 86 381-467 48-133 (133)
367 2if4_A ATFKBP42; FKBP-like, al 99.2 5.4E-11 1.9E-15 115.3 9.0 102 384-486 231-333 (338)
368 1dce_A Protein (RAB geranylger 99.2 2.4E-10 8.3E-15 118.3 13.9 105 380-485 60-177 (567)
369 3k9i_A BH0479 protein; putativ 99.2 1.4E-10 4.9E-15 93.5 9.7 84 380-464 24-107 (117)
370 4g1t_A Interferon-induced prot 99.1 1.2E-10 4.1E-15 117.8 11.0 102 383-485 94-208 (472)
371 3fp2_A TPR repeat-containing p 99.1 1.9E-10 6.7E-15 118.1 12.0 105 381-486 308-412 (537)
372 3dra_A Protein farnesyltransfe 99.1 1.5E-09 5E-14 102.9 16.9 104 381-485 65-179 (306)
373 3sg8_A APH(2'')-ID; antibiotic 99.1 1.1E-11 3.7E-16 118.4 1.9 183 59-251 25-289 (304)
374 3u3w_A Transcriptional activat 99.1 1.2E-10 4E-15 110.5 8.9 103 381-483 153-268 (293)
375 2vyi_A SGTA protein; chaperone 99.1 5.5E-10 1.9E-14 90.9 11.9 88 381-469 44-131 (131)
376 2fbn_A 70 kDa peptidylprolyl i 99.1 1.5E-10 5.1E-15 102.8 8.9 97 383-480 88-185 (198)
377 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 1.3E-10 4.6E-15 117.4 9.3 91 383-474 317-407 (457)
378 2hr2_A Hypothetical protein; a 99.1 9.1E-11 3.1E-15 98.8 6.6 77 382-459 56-143 (159)
379 3sz7_A HSC70 cochaperone (SGT) 99.1 1.9E-10 6.6E-15 98.8 8.8 83 381-464 43-125 (164)
380 2ond_A Cleavage stimulation fa 99.1 3.1E-10 1.1E-14 108.4 11.1 104 381-485 97-202 (308)
381 2xpi_A Anaphase-promoting comp 99.1 3.4E-10 1.2E-14 118.1 12.3 105 382-486 474-584 (597)
382 2l6j_A TPR repeat-containing p 99.1 2.8E-10 9.6E-15 90.3 9.0 69 417-485 3-71 (111)
383 3edt_B KLC 2, kinesin light ch 99.1 1.3E-10 4.3E-15 108.4 8.1 104 380-484 82-201 (283)
384 2ifu_A Gamma-SNAP; membrane fu 99.1 1.8E-10 6.3E-15 110.0 9.4 104 381-486 114-228 (307)
385 1zu2_A Mitochondrial import re 99.1 1.7E-10 5.7E-15 97.0 7.7 75 379-454 32-127 (158)
386 3rkv_A Putative peptidylprolyl 99.1 1.3E-10 4.4E-15 99.6 7.3 88 381-469 61-149 (162)
387 2r5s_A Uncharacterized protein 99.1 4.2E-10 1.4E-14 97.9 10.7 85 395-480 86-172 (176)
388 3upv_A Heat shock protein STI1 99.1 3.2E-10 1.1E-14 92.6 9.2 84 381-465 36-125 (126)
389 3edt_B KLC 2, kinesin light ch 99.1 2.1E-10 7.3E-15 106.8 9.1 101 380-481 40-156 (283)
390 1dce_A Protein (RAB geranylger 99.1 1.5E-10 5.2E-15 119.8 8.7 107 379-486 103-226 (567)
391 2qfc_A PLCR protein; TPR, HTH, 99.1 3.2E-10 1.1E-14 107.5 10.3 101 382-483 154-268 (293)
392 3ro3_A PINS homolog, G-protein 99.1 2.5E-10 8.7E-15 96.6 8.3 101 384-484 50-161 (164)
393 1ihg_A Cyclophilin 40; ppiase 99.1 4.5E-10 1.5E-14 110.2 11.0 94 380-474 270-363 (370)
394 1na3_A Designed protein CTPR2; 99.1 3.9E-10 1.3E-14 85.9 8.4 74 413-486 4-77 (91)
395 2qfc_A PLCR protein; TPR, HTH, 99.1 1.2E-09 4E-14 103.5 13.6 103 382-484 114-228 (293)
396 3nf1_A KLC 1, kinesin light ch 99.1 5.5E-10 1.9E-14 105.7 10.8 104 380-484 150-310 (311)
397 3ma5_A Tetratricopeptide repea 99.1 4.2E-10 1.4E-14 88.1 8.1 83 381-464 5-89 (100)
398 2gw1_A Mitochondrial precursor 99.0 2.9E-10 1E-14 115.9 8.9 105 381-486 370-483 (514)
399 2ond_A Cleavage stimulation fa 99.0 7.5E-10 2.6E-14 105.7 11.2 101 383-484 133-238 (308)
400 2ifu_A Gamma-SNAP; membrane fu 99.0 2E-10 6.9E-15 109.7 7.0 104 381-485 74-188 (307)
401 4f3v_A ESX-1 secretion system 99.0 8.7E-10 3E-14 102.3 10.3 103 381-484 134-240 (282)
402 3dra_A Protein farnesyltransfe 99.0 7.8E-10 2.7E-14 104.8 10.3 106 380-486 100-220 (306)
403 3ulq_A Response regulator aspa 99.0 5.6E-10 1.9E-14 109.9 9.5 106 379-484 180-296 (383)
404 3u3w_A Transcriptional activat 99.0 4.9E-10 1.7E-14 106.1 8.8 103 383-485 115-229 (293)
405 1hxi_A PEX5, peroxisome target 99.0 5.7E-10 1.9E-14 90.7 7.6 68 419-486 18-85 (121)
406 1ouv_A Conserved hypothetical 99.0 2.1E-09 7.2E-14 100.3 12.6 99 380-483 35-145 (273)
407 3dss_A Geranylgeranyl transfer 99.0 8.9E-10 3.1E-14 105.1 10.1 107 379-486 104-227 (331)
408 2kck_A TPR repeat; tetratricop 99.0 1.1E-09 3.9E-14 86.4 9.2 72 412-484 1-72 (112)
409 2xpi_A Anaphase-promoting comp 99.0 1.7E-09 5.8E-14 112.7 12.7 102 381-483 405-506 (597)
410 2c2l_A CHIP, carboxy terminus 99.0 3.4E-10 1.2E-14 106.7 6.4 102 381-485 36-168 (281)
411 3q15_A PSP28, response regulat 99.0 1.1E-09 3.7E-14 107.8 9.9 104 381-484 180-293 (378)
412 3gw4_A Uncharacterized protein 99.0 7.7E-10 2.6E-14 98.0 8.0 106 379-484 62-179 (203)
413 4a1s_A PINS, partner of inscut 99.0 1.1E-09 3.8E-14 108.5 10.0 102 381-483 46-157 (411)
414 3ro2_A PINS homolog, G-protein 99.0 1.4E-09 4.7E-14 103.7 10.3 103 382-485 4-116 (338)
415 3nf1_A KLC 1, kinesin light ch 99.0 2.4E-09 8.4E-14 101.2 11.7 102 379-481 65-182 (311)
416 3ro3_A PINS homolog, G-protein 99.0 1.1E-09 3.7E-14 92.6 8.3 105 380-484 6-121 (164)
417 4g1t_A Interferon-induced prot 99.0 1.3E-09 4.5E-14 110.1 10.0 103 381-484 245-366 (472)
418 3ulq_A Response regulator aspa 99.0 8.2E-10 2.8E-14 108.7 8.2 103 379-481 139-253 (383)
419 3sf4_A G-protein-signaling mod 99.0 1.4E-09 4.6E-14 107.2 9.7 102 383-485 9-120 (406)
420 3qou_A Protein YBBN; thioredox 99.0 1.8E-09 6.1E-14 102.0 10.0 97 383-480 185-283 (287)
421 3q7a_A Farnesyltransferase alp 99.0 4.2E-09 1.4E-13 101.0 12.4 106 379-485 84-200 (349)
422 3dss_A Geranylgeranyl transfer 99.0 5.7E-09 1.9E-13 99.5 13.1 105 381-486 62-179 (331)
423 1na0_A Designed protein CTPR3; 99.0 3.7E-09 1.3E-13 85.0 10.3 85 381-466 41-125 (125)
424 2kc7_A BFR218_protein; tetratr 98.9 1.6E-09 5.3E-14 84.2 7.5 66 421-486 3-69 (99)
425 3q7a_A Farnesyltransferase alp 98.9 1.9E-09 6.5E-14 103.3 9.4 107 379-486 119-242 (349)
426 1elw_A TPR1-domain of HOP; HOP 98.9 4.4E-09 1.5E-13 83.7 10.2 82 381-463 36-117 (118)
427 3q49_B STIP1 homology and U bo 98.9 3.1E-09 1E-13 87.7 9.2 75 411-486 3-77 (137)
428 3bee_A Putative YFRE protein; 98.9 4.9E-09 1.7E-13 80.6 9.6 72 413-485 2-76 (93)
429 2dba_A Smooth muscle cell asso 98.9 2.1E-08 7.1E-13 83.5 14.1 81 383-464 65-145 (148)
430 2v5f_A Prolyl 4-hydroxylase su 98.9 6.8E-09 2.3E-13 81.8 10.3 78 383-461 5-89 (104)
431 1ouv_A Conserved hypothetical 98.9 1.5E-08 5.3E-13 94.4 14.3 98 381-483 72-181 (273)
432 2kat_A Uncharacterized protein 98.9 3.2E-09 1.1E-13 85.1 7.8 84 381-465 17-102 (115)
433 2xev_A YBGF; tetratricopeptide 98.9 1.3E-08 4.5E-13 82.9 11.2 83 384-467 40-125 (129)
434 3rjv_A Putative SEL1 repeat pr 98.9 6.2E-09 2.1E-13 93.5 10.0 97 381-481 48-158 (212)
435 1pc2_A Mitochondria fission pr 98.9 5.1E-09 1.7E-13 87.0 8.2 87 399-486 14-105 (152)
436 3sf4_A G-protein-signaling mod 98.9 3.5E-09 1.2E-13 104.2 8.1 100 383-483 187-298 (406)
437 3gw4_A Uncharacterized protein 98.8 5.6E-09 1.9E-13 92.3 8.4 102 381-483 24-138 (203)
438 3r70_A Aminoglycoside phosphot 98.8 5.9E-09 2E-13 100.1 9.0 133 57-203 40-238 (320)
439 4a1s_A PINS, partner of inscut 98.8 3.9E-09 1.3E-13 104.5 7.8 101 382-483 222-334 (411)
440 3rjv_A Putative SEL1 repeat pr 98.8 1.5E-08 5.1E-13 91.0 10.7 102 381-483 83-199 (212)
441 3n71_A Histone lysine methyltr 98.8 1E-08 3.5E-13 103.7 10.6 103 379-481 305-422 (490)
442 3ro2_A PINS homolog, G-protein 98.8 6.3E-09 2.2E-13 99.1 7.9 99 385-484 225-335 (338)
443 3q15_A PSP28, response regulat 98.8 1E-08 3.4E-13 100.8 9.3 103 381-483 139-253 (378)
444 3ly7_A Transcriptional activat 98.7 6.9E-08 2.4E-12 92.4 12.6 74 410-485 270-343 (372)
445 3qww_A SET and MYND domain-con 98.7 2.8E-08 9.5E-13 98.9 10.3 95 387-481 302-411 (433)
446 1elr_A TPR2A-domain of HOP; HO 98.7 2.4E-08 8.2E-13 81.0 7.0 85 381-467 36-127 (131)
447 3tdw_A Gentamicin resistance p 98.7 5.7E-08 1.9E-12 92.5 10.1 134 59-202 24-224 (306)
448 2ooe_A Cleavage stimulation fa 98.7 7.1E-08 2.4E-12 99.3 11.2 103 381-484 270-388 (530)
449 1klx_A Cysteine rich protein B 98.7 1.3E-07 4.4E-12 78.6 10.4 89 389-482 31-127 (138)
450 3d1u_A Putative fructosamine-3 98.7 5.4E-08 1.9E-12 91.6 8.9 76 59-138 20-98 (288)
451 4f3v_A ESX-1 secretion system 98.6 4.7E-08 1.6E-12 90.7 7.9 97 384-482 103-201 (282)
452 3qwp_A SET and MYND domain-con 98.6 7.7E-08 2.6E-12 95.8 9.9 99 383-481 287-400 (429)
453 4gkh_A Aminoglycoside 3'-phosp 98.6 1.2E-07 4E-12 88.5 9.5 128 65-201 35-222 (272)
454 2ooe_A Cleavage stimulation fa 98.6 1.9E-07 6.5E-12 96.1 11.2 100 384-484 357-457 (530)
455 1hz4_A MALT regulatory protein 98.6 8.9E-08 3.1E-12 93.5 8.3 100 384-484 94-206 (373)
456 1hz4_A MALT regulatory protein 98.5 2.2E-07 7.6E-12 90.7 10.2 67 384-450 136-206 (373)
457 3ats_A Putative uncharacterize 98.5 1.3E-07 4.6E-12 92.0 7.7 81 59-139 25-122 (357)
458 3u64_A Protein TP_0956; tetrat 98.5 3.4E-07 1.1E-11 84.1 9.1 104 381-484 150-272 (301)
459 3ovc_A Hygromycin-B 4-O-kinase 98.5 2.4E-07 8.3E-12 90.2 8.5 80 53-138 40-122 (362)
460 2v5f_A Prolyl 4-hydroxylase su 98.5 4.8E-07 1.6E-11 71.0 8.1 69 418-486 5-80 (104)
461 2xm6_A Protein corresponding t 98.5 7.3E-07 2.5E-11 90.7 11.5 98 381-483 326-434 (490)
462 3bee_A Putative YFRE protein; 98.4 6.3E-07 2.2E-11 68.6 7.8 71 381-452 4-77 (93)
463 3e4b_A ALGK; tetratricopeptide 98.4 4.6E-07 1.6E-11 91.2 8.7 95 383-481 176-280 (452)
464 1pc2_A Mitochondria fission pr 98.4 5.8E-07 2E-11 74.6 7.4 81 382-462 31-115 (152)
465 3n71_A Histone lysine methyltr 98.4 4.7E-07 1.6E-11 91.6 7.6 100 381-480 349-463 (490)
466 2xm6_A Protein corresponding t 98.3 3.4E-06 1.1E-10 85.7 12.6 96 381-481 73-180 (490)
467 2q83_A YTAA protein; 2635576, 98.3 5E-06 1.7E-10 80.1 13.3 137 59-201 37-251 (346)
468 2olc_A MTR kinase, methylthior 98.3 2.8E-06 9.7E-11 83.9 10.5 96 38-135 9-120 (397)
469 1xi4_A Clathrin heavy chain; a 98.3 3.5E-06 1.2E-10 92.7 11.4 63 417-484 1104-1166(1630)
470 1xi4_A Clathrin heavy chain; a 98.2 4.1E-06 1.4E-10 92.1 11.5 95 378-478 1100-1221(1630)
471 1klx_A Cysteine rich protein B 98.2 3E-06 1E-10 70.2 8.3 79 396-481 8-90 (138)
472 3e4b_A ALGK; tetratricopeptide 98.2 1E-05 3.5E-10 81.4 13.2 94 381-481 246-351 (452)
473 1nzn_A CGI-135 protein, fissio 98.2 2.9E-06 1E-10 67.7 7.0 84 401-485 19-107 (126)
474 1b89_A Protein (clathrin heavy 98.1 4.2E-06 1.4E-10 82.2 7.2 93 382-484 147-239 (449)
475 4b4t_Q 26S proteasome regulato 98.1 5.2E-06 1.8E-10 82.5 7.9 100 384-484 5-127 (434)
476 3mv2_B Coatomer subunit epsilo 98.1 1.9E-05 6.4E-10 74.2 11.0 99 385-484 102-210 (310)
477 3jr1_A Putative fructosamine-3 98.0 2E-05 7E-10 74.6 10.7 75 59-137 41-118 (312)
478 3mv2_B Coatomer subunit epsilo 98.0 1.5E-05 5.2E-10 74.8 9.7 97 385-486 178-287 (310)
479 3f7w_A Putative fructosamine-3 97.9 2.6E-05 9E-10 73.2 9.4 76 58-137 19-97 (288)
480 2ppq_A HSK, HK, homoserine kin 97.9 5.4E-05 1.8E-09 72.2 11.5 160 38-201 4-216 (322)
481 3ffl_A Anaphase-promoting comp 97.9 3.4E-05 1.2E-09 64.3 8.6 94 384-477 21-147 (167)
482 4b4t_Q 26S proteasome regulato 97.9 4.7E-05 1.6E-09 75.5 10.8 102 383-484 95-207 (434)
483 2pyw_A Uncharacterized protein 97.9 6.7E-05 2.3E-09 74.5 11.4 74 58-134 38-122 (420)
484 1zyl_A Hypothetical protein YI 97.8 0.00018 6E-09 68.8 12.9 98 38-137 8-114 (328)
485 2yle_A Protein spire homolog 1 97.7 6.6E-05 2.3E-09 65.8 7.3 139 135-308 33-197 (229)
486 1nzn_A CGI-135 protein, fissio 97.7 0.00015 5.3E-09 57.7 8.5 81 382-462 34-118 (126)
487 3ly7_A Transcriptional activat 97.7 5.7E-05 2E-09 72.3 6.9 77 381-459 275-351 (372)
488 3dxq_A Choline/ethanolamine ki 97.7 0.00013 4.5E-09 68.8 9.2 72 59-138 23-96 (301)
489 1b89_A Protein (clathrin heavy 97.6 6.3E-05 2.2E-09 73.9 6.9 98 381-483 175-274 (449)
490 3qwp_A SET and MYND domain-con 97.6 5.6E-05 1.9E-09 75.1 6.5 85 381-465 327-426 (429)
491 3qww_A SET and MYND domain-con 97.6 9.4E-05 3.2E-09 73.4 7.2 74 381-454 338-423 (433)
492 3csv_A Aminoglycoside phosphot 97.6 0.0003 1E-08 67.3 10.2 77 59-140 23-102 (333)
493 3feg_A Choline/ethanolamine ki 97.5 0.00036 1.2E-08 67.9 10.0 138 59-201 55-253 (379)
494 3o48_A Mitochondria fission 1 97.5 0.00036 1.2E-08 55.8 7.7 82 382-463 39-123 (134)
495 1y8m_A FIS1; mitochondria, unk 97.5 0.00076 2.6E-08 54.6 9.6 80 382-461 38-120 (144)
496 1nw1_A Choline kinase (49.2 KD 97.4 0.00056 1.9E-08 67.9 10.7 74 59-138 78-160 (429)
497 1y8m_A FIS1; mitochondria, unk 97.4 0.0012 4.2E-08 53.4 10.3 70 417-486 38-111 (144)
498 3i1a_A Spectinomycin phosphotr 97.4 0.0013 4.6E-08 63.0 12.2 68 63-137 32-108 (339)
499 3o48_A Mitochondria fission 1 97.4 0.0011 3.8E-08 53.0 9.4 70 417-486 39-112 (134)
500 2qg7_A Ethanolamine kinase PV0 97.4 0.0012 4.1E-08 65.9 12.1 75 59-138 113-189 (458)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-59 Score=443.72 Aligned_cols=256 Identities=19% Similarity=0.224 Sum_probs=206.8
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+++..+.++||+|+||+||+|++.+ .||||+++..... ..+.|.+|+.+|++++|||||++++++. .+.++||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEE
Confidence 4566788999999999999998643 4999999754422 2457999999999999999999999875 467899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
||+||+|.++|.. ....+++.++..|+.||+.||.|||+++ ||||||||+|||+++++++||+|||+|+.....
T Consensus 112 y~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 112 WCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred cCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999964 3457999999999999999999999999 999999999999999999999999999865431
Q ss_pred --CccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 207 --KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
....||+.|||||++.+ ++++.++|||||||+||||+||+.||...............-.........+..++++
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 269 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKA 269 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHH
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHH
Confidence 24579999999999964 4689999999999999999999999865322111111111111111112345567889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+|+.+||+.||++|||+.+|+++|+.++..
T Consensus 270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999988764
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.7e-59 Score=447.97 Aligned_cols=251 Identities=20% Similarity=0.264 Sum_probs=211.7
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
+..+++++||+|+||+||+|.+. +++.||||+++.... ...+.|.+|+.+|++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34567889999999999999862 467899999976543 23568999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNP 192 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~ 192 (488)
||||||++|+|.++|.... ...++|.+++.|+.||+.||.|||+++ ||||||||+|||+++++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCE
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCE
Confidence 9999999999999996421 246999999999999999999999999 9999999999999999999
Q ss_pred eeccCCCcccCCC------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccc
Q 011349 193 RLSCFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLML 265 (488)
Q Consensus 193 kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 265 (488)
||+|||+++.... .....||+.|||||++.++.++.++|||||||++|||+| |..||.+.....+ ...
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~-----~~~ 259 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV-----VEM 259 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHH-----HHH
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHH-----HHH
Confidence 9999999986532 234578999999999999999999999999999999999 7888765432221 112
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+......+.|..+++++.+|+.+||+.||++|||+.+|+++|+.+
T Consensus 260 i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 222233445667889999999999999999999999999999865
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.1e-59 Score=448.74 Aligned_cols=253 Identities=23% Similarity=0.294 Sum_probs=213.1
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.++||+|+||+||+|.+. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..+||
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 3456788999999999999853 4778999999876544567899999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 129 AEFMPNETLSKHLFHW-----------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
||||+||+|.++|... ....++|.+++.|+.||+.||.|||+++ ||||||||+|||+++++++||+||
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCc
Confidence 9999999999999642 2357999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccccccc
Q 011349 198 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 198 gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
|+++..... ....||+.|||||++.++.++.++|||||||++|||+| |+.||........ ...+....
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~-----~~~i~~~~ 247 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-----IECITQGR 247 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----HHHHHHTC
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHcCC
Confidence 999865432 23468999999999999999999999999999999999 8888866432221 11111222
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
....|..+++++.+|+.+||+.||++|||+.+|+..|+.+.+.
T Consensus 248 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 248 VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 3345667789999999999999999999999999999988764
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.2e-59 Score=451.63 Aligned_cols=252 Identities=23% Similarity=0.306 Sum_probs=209.2
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..+.++||+|+||+||+|.+. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|||
T Consensus 43 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~ 122 (329)
T 4aoj_A 43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVF 122 (329)
T ss_dssp EEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred eEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 456678999999999999864 47889999998765445678999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeecc
Q 011349 130 EFMPNETLSKHLFHWE-------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSC 196 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~D 196 (488)
|||+||+|.+++.... ..+++|.+++.|+.||+.||.|||+++ ||||||||+|||+++++++||+|
T Consensus 123 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp ECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECC
T ss_pred EcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEcc
Confidence 9999999999986431 246999999999999999999999999 99999999999999999999999
Q ss_pred CCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccc
Q 011349 197 FGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSC 269 (488)
Q Consensus 197 fgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 269 (488)
||+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||........ ...+...
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~-----~~~i~~g 276 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-----IDCITQG 276 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH-----HHHHHHT
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHcC
Confidence 9999865432 23568999999999999999999999999999999999 8888865432211 1111122
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+...|..+++++.+|+.+||+.||++|||+.+|+++|+.+...
T Consensus 277 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 277 RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 23445667789999999999999999999999999999998764
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.7e-59 Score=449.02 Aligned_cols=247 Identities=16% Similarity=0.189 Sum_probs=207.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+.|.++++||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.+|++++|||||++++++.+++.+|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4689999999999999999994 579999999997654332 4579999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
||+||+|.++|.......+++.+++.|+.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 999999999997656667899999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+||+.|||||++.+..|+.++|||||||++|||+||+.||.+.......... .... ....+..+++++.+||
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i----~~~~-~~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI----ISGS-FPPVSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH----HHTC-CCCCCTTSCHHHHHHH
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH----HcCC-CCCCCccCCHHHHHHH
Confidence 2457999999999999999999999999999999999999999765332221111 1111 1233455678999999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||+.||++|||+.++++|
T Consensus 258 ~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHTCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999986
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.5e-58 Score=446.34 Aligned_cols=245 Identities=20% Similarity=0.250 Sum_probs=210.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.++++||+|+||+||+|.. .+|+.||||+++.......+.+.+|+.+|++++|||||+++++|.+++.+|||||||+
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 478899999999999999995 5799999999987665667789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
||+|.+++.+ ..+++.++..|+.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+..... .+.
T Consensus 155 gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 230 (346)
T 4fih_A 155 GGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 230 (346)
T ss_dssp TEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred CCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccc
Confidence 9999999963 46999999999999999999999999 999999999999999999999999999876432 356
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+||+.|||||++.+..|+.++|||||||++|||+||++||.+......... +..... ........+++++.+||.+|
T Consensus 231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~-i~~~~~--~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLP--PRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSSC--CCCSCGGGSCHHHHHHHHHH
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HHcCCC--CCCCccccCCHHHHHHHHHH
Confidence 899999999999999999999999999999999999999876432211111 111010 11122345678999999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|..||++|||+.++++|
T Consensus 308 L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 308 LVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999987
No 7
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.7e-58 Score=487.33 Aligned_cols=411 Identities=17% Similarity=0.110 Sum_probs=279.7
Q ss_pred CcccccccCCCCCCceEEEEEeC--CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCe-----e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD--EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE-----R 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-----~ 125 (488)
+.|.+++.||+|+||.||+|.+. +|+.||||++..... .....+.+|+.++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 46788999999999999999964 589999999875432 223568899999999999999999999987655 6
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
||||||++|++|.+++. ..+++.+++.|+.||+.||.|||+++ ||||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 99999999999998774 26999999999999999999999999 9999999999999975 899999999998877
Q ss_pred CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 206 GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
.....||+.|+|||++.+.. +.++|||||||++|+|++|.+|+...... ...........++.+.+|
T Consensus 234 ~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------~~~~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD------------GLPEDDPVLKTYDSYGRL 300 (681)
T ss_dssp CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS------------SCCTTCHHHHHCHHHHHH
T ss_pred CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc------------cccccccccccCHHHHHH
Confidence 77778999999999997654 88999999999999999998765432110 000111111234679999
Q ss_pred HHHhccCCCCCCCC-HHHHHHHhchhhccc-----CCCCCccCC--CCCCCCCCCccccc--------------Ccchhh
Q 011349 286 ASRCLQYEPRERPN-AKSLVASLTPLQKEA-----EVPSYTLMG--IPHGTASTKQTITL--------------TPLGEA 343 (488)
Q Consensus 286 i~~cl~~dp~~Rps-~~~il~~l~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~--------------~~~~~~ 343 (488)
+.+||+.||.+||+ ++++...|..+.... ..+.+.... .+............ ....+.
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEI 380 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHHHHHHHHHHHSCCCCCCCSSBCCCSSCCSSSHHHHGGGHHHHCCCCCCCCCHHHH
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHHHHHhhccccCCCCCcccccCCcccccccchhhhhhcccccccccccccCCHHHH
Confidence 99999999999985 566666665543211 111111000 00000000000000 000000
Q ss_pred hh---------------------chhhhHHHHHHHhhc-----------ccCchhh--hhhhhhh---------hhh---
Q 011349 344 CS---------------------RLDLTAIHEILEKVG-----------YKDDEGI--ANELSFQ---------MWT--- 377 (488)
Q Consensus 344 ~~---------------------~~~~~~i~~~l~~~~-----------~~~~~~~--~~~~~~~---------~~~--- 377 (488)
.. ..+..+....+.+.- ....+.. .....+. .+.
T Consensus 381 ~~~L~~p~~~p~~~~a~~~~a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al 460 (681)
T 2pzi_A 381 VTALSVPLVDPTDVAASVLQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLA 460 (681)
T ss_dssp HHHSCCBCCCTTSTTHHHHHHTTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HhhCCCccCCCCCcchHHhhcccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 00 000011111111110 0000000 0000000 000
Q ss_pred -hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 378 -DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 378 -~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
...+++.+|+.+|.+++..|+|++|+..|++|++++|+ ++.+|+++|.+|.++|++++ +++|++|++++|+++.+|+
T Consensus 461 ~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~ 538 (681)
T 2pzi_A 461 ERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAF 538 (681)
T ss_dssp HHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHH
T ss_pred ccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHH
Confidence 01134567777777777777777777777777777777 77777777777777777777 7777777777777777888
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++|.++..+|++++|+++|++|++++|+.
T Consensus 539 ~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 567 (681)
T 2pzi_A 539 GLARARSAEGDRVGAVRTLDEVPPTSRHF 567 (681)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSCTTSTTH
T ss_pred HHHHHHHHcCCHHHHHHHHHhhcccCccc
Confidence 88888888888888888888888887764
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.2e-58 Score=440.74 Aligned_cols=250 Identities=17% Similarity=0.122 Sum_probs=210.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...+.+.++||+|+||.||+|++ .+|+.||||+++.... ..+|+.+|+.++|||||++++++.+++.+||||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 44567888999999999999995 5699999999976542 24799999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~---- 206 (488)
|+||+|.++|.. .+.+++.++..|+.||+.||.|||+++ ||||||||+||||+.+| ++||+|||+|+.....
T Consensus 132 ~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999999973 457999999999999999999999999 99999999999999887 6999999999865432
Q ss_pred -----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc-ccCCCCChhhHH
Q 011349 207 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS-CLEGHFSNDDGT 280 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 280 (488)
...+||+.|||||++.+..++.++|||||||++|||+||++||........ ...+... ......+..+++
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~s~ 284 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL----CLKIASEPPPIREIPPSCAP 284 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC----HHHHHHSCCGGGGSCTTSCH
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHHcCCCCchhcCccCCH
Confidence 235799999999999999999999999999999999999999865422111 1111111 111234556788
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.+.++|.+||+.||.+|||+.|++++|.......
T Consensus 285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999998776554
No 9
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.2e-57 Score=447.58 Aligned_cols=245 Identities=20% Similarity=0.247 Sum_probs=211.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.++++||+|+||.||+|.. .+|+.||||++........+.+.+|+.+|+.++|||||+++++|.+++.+|||||||+
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~ 231 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 231 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCC
Confidence 478899999999999999995 5699999999987766667789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
||+|.+++. ...+++.++..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... .+.
T Consensus 232 gG~L~~~i~---~~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 307 (423)
T 4fie_A 232 GGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 307 (423)
T ss_dssp TEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCC
T ss_pred CCcHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccc
Confidence 999999995 346999999999999999999999999 999999999999999999999999999876432 356
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+||+.|||||++.+..|+.++|||||||++|||++|+.||.+......... +...... .......+++++.+||.+|
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~-i~~~~~~--~~~~~~~~s~~~~dli~~~ 384 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLPP--RLKNLHKVSPSLKGFLDRL 384 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSCCC--CCSCTTSSCHHHHHHHHHH
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HHcCCCC--CCcccccCCHHHHHHHHHH
Confidence 899999999999999999999999999999999999999876432221111 1111111 1122335678899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|..||++|||+.++++|
T Consensus 385 L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 385 LVRDPAQRATAAELLKH 401 (423)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999987
No 10
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.5e-58 Score=434.92 Aligned_cols=244 Identities=18% Similarity=0.174 Sum_probs=209.3
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+|.+++.||+|+||+||+|+ ..+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+++.+||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 357899999999999999999 4579999999997432 234567999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
|||+||+|.++|. ..+.+++.++..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+|+.....
T Consensus 112 Ey~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999999999997 3467999999999999999999999999 999999999999999999999999999875422
Q ss_pred ---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.+.+||+.|||||++.+..++.++|||||||++|||+||+.||.+......... +... ...++...++++.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~ 262 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAK----IIKL--EYDFPEKFFPKAR 262 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHT--CCCCCTTCCHHHH
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcC--CCCCCcccCHHHH
Confidence 356899999999999999999999999999999999999999976533222111 1111 1234556678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+||.+||..||++|||+++++.+
T Consensus 263 dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGTCH
T ss_pred HHHHHHccCCHhHCcChHHHcCC
Confidence 99999999999999999987543
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.2e-57 Score=422.48 Aligned_cols=244 Identities=19% Similarity=0.252 Sum_probs=196.0
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.|.+++.||+|+||+||+|. ..+|+.||||+++.... .....+.+|+.+|++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 3567899999999999999999 45799999999976532 2345799999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+ +|+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 9999 689999987 3567999999999999999999999999 999999999999999999999999999876543
Q ss_pred -CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
.+..||+.|||||++.+..+ +.++|||||||++|||+||+.||........... +... ...++...++++.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN----ISNG--VYTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHT--CCCCCTTSCHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHH
Confidence 35689999999999998776 5799999999999999999999876533222111 1111 12344556788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
|+.+||+.||++|||++++++|
T Consensus 242 li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHC
T ss_pred HHHHHccCChhHCcCHHHHHcC
Confidence 9999999999999999999987
No 12
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.8e-57 Score=427.43 Aligned_cols=244 Identities=19% Similarity=0.231 Sum_probs=198.6
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 129 (488)
.+.++||+|+||+||+|.+ .++..||||++...... ..+.|.+|+.+|++++|||||+++++|.+ +..+||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4556799999999999995 56889999999754322 24579999999999999999999999865 34689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeec-CCCCCeeccCCCcccCCCC-
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~- 206 (488)
|||+||+|.+++. ....+++..+..|+.||+.||.|||+++ +||||||||+|||++ .++.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~ 186 (290)
T 3fpq_A 109 ELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp ECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred eCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence 9999999999997 3467999999999999999999999986 499999999999997 4799999999999865443
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
.+.+||+.|||||++.+ .++.++|||||||++|||+||+.||.......... ..+........++...++++.+|
T Consensus 187 ~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~l 262 (290)
T 3fpq_A 187 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY---RRVTSGVKPASFDKVAIPEVKEI 262 (290)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH---HHHTTTCCCGGGGGCCCHHHHHH
T ss_pred cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHH---HHHHcCCCCCCCCccCCHHHHHH
Confidence 35679999999999875 69999999999999999999999986532111100 01111111112233445789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||++|||+.++++|
T Consensus 263 i~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 263 IEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999987
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.7e-56 Score=436.02 Aligned_cols=257 Identities=21% Similarity=0.272 Sum_probs=213.7
Q ss_pred CCCcccccccCCCCCCceEEEEEeCC------CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCC-CCCcccccceecC-
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDE------DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRS-ERLVNLIGCCCEG- 122 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h-~niv~~~~~~~~~- 122 (488)
..+.+.++++||+|+||+||+|.+.. ++.||||+++...... .+.|.+|+.+|.+++| ||||+++|+|.+.
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 34567889999999999999998432 3579999998655332 4579999999999965 8999999998764
Q ss_pred CeeeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 123 EERLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
+.++||||||++|+|.++|+... ...+++.+++.|+.||+.||.|||+++ ||||||||+|||+++
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSE 220 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECG
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCC
Confidence 56899999999999999996421 345899999999999999999999999 999999999999999
Q ss_pred CCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccc
Q 011349 189 DGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKN 261 (488)
Q Consensus 189 ~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~ 261 (488)
++++||+|||+|+...... ...||+.|||||++.+..++.++|||||||++|||+| |+.||++.... ..
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~----~~ 296 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EE 296 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HH
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH----HH
Confidence 9999999999998764432 3467899999999999999999999999999999998 88888654211 11
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 262 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+...+....+...|..+++++.+++.+||+.||++|||+.+|+++|+.+.+.
T Consensus 297 ~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 297 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 1222223334456667788999999999999999999999999999987654
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.4e-57 Score=429.69 Aligned_cols=244 Identities=19% Similarity=0.213 Sum_probs=201.4
Q ss_pred CcccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
++|++++.||+|+||+||+|+. .+++.||||+++.... .....+.+|+++|++++|||||++++++.+++.+||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4578999999999999999984 2478899999975432 223468899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
|||||+||+|.+++. ..+.+++.++..++.||+.||.|||+++ ||||||||+|||++.+|++||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 999999999999997 3467999999999999999999999999 99999999999999999999999999986532
Q ss_pred --CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
..+.+||+.|||||++.+..++.++|||||||++|||+||+.||.+......... +... ...++..+++++.
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~ 254 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM----ILKA--KLGMPQFLSPEAQ 254 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHH
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH----HHcC--CCCCCCcCCHHHH
Confidence 2356899999999999999999999999999999999999999876533222111 1111 1234556778999
Q ss_pred HHHHHhccCCCCCCCC-----HHHHHHH
Q 011349 284 RLASRCLQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps-----~~~il~~ 306 (488)
+|+.+||+.||++||| ++++++|
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 9999999999999998 4688876
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-55 Score=422.53 Aligned_cols=251 Identities=17% Similarity=0.228 Sum_probs=196.4
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHH--HHHHHHHhhcCCCCCcccccceecCC----eeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQF--LEEARAVGLLRSERLVNLIGCCCEGE----ERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 129 (488)
+.+.++||+|+||+||+|++ +|+.||||+++... .+.+ ..|+..+.+++|||||+++++|.+++ .++|||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 45667899999999999998 68899999996543 3333 45666667889999999999998653 579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------GRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
|||+||+|.+++. ..++++..+.+++.|++.||.|||++ + ||||||||+|||++.++++||+|||+++
T Consensus 81 Ey~~~gsL~~~l~---~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 81 DYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCCCcHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 9999999999996 35699999999999999999999986 6 9999999999999999999999999998
Q ss_pred cCCCC--------CccccccCCCCccccccC------CcccCCceEeehHHHHHHhhCCCCCCcchhhhhh------c--
Q 011349 202 NSRDG--------KSYSTNLAFTPPEYLRTG------RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR------G-- 259 (488)
Q Consensus 202 ~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~------~-- 259 (488)
..... ....||+.|||||++.+. .++.++|||||||++|||+||.+|+......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 65432 134689999999999764 4778999999999999999998765322110000 0
Q ss_pred --cc-cccccccccCCCCCh-----hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 260 --KN-FLMLMDSCLEGHFSN-----DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 260 --~~-~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.. .........++..+. ..+..+.+|+.+||+.||++|||+.+|++.|+.+..+.
T Consensus 237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 00 001112222333332 35678999999999999999999999999999987653
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-54 Score=413.09 Aligned_cols=241 Identities=17% Similarity=0.238 Sum_probs=188.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCC---------
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGE--------- 123 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------- 123 (488)
+|.+++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.+|++++|||||+++++|.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 367889999999999999994 56999999999765432 2457899999999999999999999987544
Q ss_pred ---eeeEEEecCCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 124 ---ERLLVAEFMPNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 124 ---~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
.+|+|||||+||+|.+++..... ...++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCcc
Confidence 37999999999999999974221 23566778999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC----------------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc
Q 011349 200 MKNSRDG----------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL 263 (488)
Q Consensus 200 a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 263 (488)
|+..... .+.+||+.|||||++.+..++.++|||||||++|||++ ||......... +.
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~---~~ 238 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRT---LT 238 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH---HH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHH---HH
Confidence 9865432 13469999999999999999999999999999999996 55433211100 00
Q ss_pred cccccccCCCCCh---hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 MLMDSCLEGHFSN---DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......+++ ..++.+.+|+.+||+.||.+|||+.++++|
T Consensus 239 ----~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 239 ----DVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp ----HHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----HHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111112222 334567899999999999999999999986
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-52 Score=411.35 Aligned_cols=248 Identities=15% Similarity=0.212 Sum_probs=200.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec------CCee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE------GEER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~ 125 (488)
.|.+++.||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|+++|+.++|||||++++++.. .+.+
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 589999999999999999994 57999999999755422 23568899999999999999999998753 3578
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
|||||||+ |+|.+++. ..+.+++.++..|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++....
T Consensus 135 ~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp EEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred EEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 99999996 78999997 4578999999999999999999999999 99999999999999999999999999986532
Q ss_pred --------CCccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-------cc-----
Q 011349 206 --------GKSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------LM----- 264 (488)
Q Consensus 206 --------~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-------~~----- 264 (488)
..+.+||+.|||||++.+. .++.++||||+||++|||+||++||++........... ..
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~ 290 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC--
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence 2356899999999998875 56899999999999999999999997653211100000 00
Q ss_pred -------c---cccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 -------L---MDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 -------~---~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. +....... ..+..++++.+||.+||..||.+|||+.++++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0 00000000 011345789999999999999999999999987
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.6e-51 Score=399.21 Aligned_cols=244 Identities=19% Similarity=0.238 Sum_probs=196.1
Q ss_pred cccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.|.++++||+|+||+||+|+.+ +++.||||++.... ....+.+|+++|+.+ +|||||++++++.+.+.+|+||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4689999999999999999842 46789999986543 456789999999999 6999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~-- 206 (488)
||++||+|.+++. .+++.++..++.||+.||.|||++| ||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 100 E~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 100 PYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp ECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred eCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 9999999999983 4999999999999999999999999 9999999999999876 79999999999754321
Q ss_pred ------------------------------CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhh
Q 011349 207 ------------------------------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALD 255 (488)
Q Consensus 207 ------------------------------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~ 255 (488)
.+.+||+.|||||++.+. .++.++||||+||++|||+||+.||.....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence 134689999999999875 4899999999999999999999988543211
Q ss_pred hhhc-------------------------------cccccccc------c------------ccCCCCChhhHHHHHHHH
Q 011349 256 LIRG-------------------------------KNFLMLMD------S------------CLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 256 ~~~~-------------------------------~~~~~~~~------~------------~~~~~~~~~~~~~l~~li 286 (488)
.... ........ . ..........++++.+|+
T Consensus 254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl 333 (361)
T 4f9c_A 254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL 333 (361)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence 0000 00000000 0 000011123467889999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||..||++|||++|+++|
T Consensus 334 ~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 334 DKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHTCSCTTTSCCHHHHHTS
T ss_pred HHHCcCChhHCcCHHHHhcC
Confidence 99999999999999999987
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=9.7e-51 Score=418.87 Aligned_cols=249 Identities=19% Similarity=0.169 Sum_probs=204.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHH---HHHHhhcCCCCCcccccceecCCee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEE---ARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
.++|.+++.||+|+||.||+|+. .+|+.||||+++... ......+.+| +.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 35789999999999999999994 569999999996432 1222334444 6667778999999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
|||||||+||+|.++|. ..+.+++..+..++.||+.||.|||++| ||||||||+||||+.+|++||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 99999999999999997 3467999999999999999999999999 99999999999999999999999999987654
Q ss_pred C--CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 206 G--KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 206 ~--~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
. .+.+||+.|||||++.+ ..|+.++|||||||++|||+||.+||.+....... ........ ....++...++++
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-~i~~~i~~--~~~~~p~~~S~~a 421 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLT--MAVELPDSFSPEL 421 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-HHHHHHHH--CCCCCCTTSCHHH
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhhcC--CCCCCCccCCHHH
Confidence 3 46789999999999974 57999999999999999999999998754221110 00011111 1223455677899
Q ss_pred HHHHHHhccCCCCCCCC-----HHHHHHHh
Q 011349 283 VRLASRCLQYEPRERPN-----AKSLVASL 307 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps-----~~~il~~l 307 (488)
.+||.+||..||.+|++ +++|++|-
T Consensus 422 ~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp HHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred HHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 99999999999999998 78998873
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.1e-50 Score=421.17 Aligned_cols=249 Identities=20% Similarity=0.152 Sum_probs=210.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.|.+++.||+|+||.||+|.. .+|+.||||++......+.+.+.+|+.+|+.++|||||+++++|.+.+.+|||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 3578899999999999999994 579999999998765455667999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC--CCCeeccCCCcccCCCCC---
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD--GNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~--~~~kl~Dfgla~~~~~~~--- 207 (488)
+||+|.++|.. ....+++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999999864 3457999999999999999999999999 9999999999999854 899999999999876543
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+||+.|||||++.+..++.++|||||||++|||++|.+||.+............. ............++++.+||.
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~dli~ 392 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC--DWNMDDSAFSGISEDGKDFIR 392 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT--CCCCCSGGGTTSCHHHHHHHH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhC--CCCCCcccccCCCHHHHHHHH
Confidence 457999999999999999999999999999999999999998765332221111000 000111122345678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..||.+|||+.++++|
T Consensus 393 ~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 393 KLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TTSCSSGGGSCCHHHHHHS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999987
No 21
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.2e-49 Score=382.50 Aligned_cols=270 Identities=24% Similarity=0.421 Sum_probs=226.3
Q ss_pred ccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccce
Q 011349 40 EFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC 119 (488)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 119 (488)
.+++.++..++++| .+.+.||+|+||.||+|.+.+++.||||++........+.+.+|+.+++.++||||+++++++
T Consensus 28 ~~~~~~~~~~~~~y---~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 104 (321)
T 2qkw_B 28 RVPLVDLEEATNNF---DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104 (321)
T ss_dssp --CCSCCCCCCCCC---SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred eecHHHHHHHHhcc---CccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34445555566666 677788999999999999888999999999877656677899999999999999999999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
...+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCC
T ss_pred cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeec
Confidence 99999999999999999999996432 235999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh-----------hhhcc
Q 011349 198 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-----------LIRGK 260 (488)
Q Consensus 198 gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~-----------~~~~~ 260 (488)
|+++..... ....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .....
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 999764321 2345799999999999889999999999999999999999987643211 11122
Q ss_pred ccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 261 NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+...+++......+...+..+.+++.+||+.||++|||+.+++++|+.+.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 23344444455566778889999999999999999999999999999988764
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.4e-48 Score=377.55 Aligned_cols=273 Identities=28% Similarity=0.466 Sum_probs=227.7
Q ss_pred CCCCccccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCC
Q 011349 34 ALPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERL 112 (488)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~ni 112 (488)
.....+.|++.++...+++| .+.+.||+|+||.||+|...+|+.||||++...... ....+.+|+.+++.++||||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y---~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i 89 (326)
T 3uim_A 13 HLGQLKRFSLRELQVASDNF---SNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 89 (326)
T ss_dssp --CCCEECCTHHHHTTTTSS---CSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTB
T ss_pred ccCccceecHHHHHHHhhcc---ccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCc
Confidence 34456789999999888877 566777999999999999878999999999865422 23479999999999999999
Q ss_pred cccccceecCCeeeEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccCCceeec
Q 011349 113 VNLIGCCCEGEERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSK---GRALYHDLNTYRILFD 187 (488)
Q Consensus 113 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~---~~iiH~Dlkp~Nill~ 187 (488)
+++++++...+..++||||+++|+|.+++... ....+++..+..++.||+.||.|||+. + |+||||||+|||++
T Consensus 90 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLD 168 (326)
T ss_dssp CCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEEC
T ss_pred cceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEEC
Confidence 99999999999999999999999999999753 234599999999999999999999999 8 99999999999999
Q ss_pred CCCCCeeccCCCcccCCCC-----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh-------
Q 011349 188 QDGNPRLSCFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD------- 255 (488)
Q Consensus 188 ~~~~~kl~Dfgla~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~------- 255 (488)
.++.+||+|||+++..... ....||+.|+|||.+.+..++.++|||||||++|+|+||+.||......
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 248 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBH
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhH
Confidence 9999999999999865432 2345899999999998888999999999999999999999988532111
Q ss_pred ------hhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 256 ------LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 256 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
...........+.......+...+..+.+++.+||+.||.+|||+.+++++|+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 1122233344444455566778889999999999999999999999999999864
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4e-48 Score=374.32 Aligned_cols=256 Identities=20% Similarity=0.271 Sum_probs=214.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.+.+.+.||+|+||.||+|.. .+++.||+|++........+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 3567888999999999999995 468999999987655445678999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
+|++|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 90 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 90 KGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp TTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred CCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 99999999975 3567999999999999999999999999 9999999999999999999999999997654321
Q ss_pred -------------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC
Q 011349 208 -------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 208 -------------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
...||+.|+|||++.+..++.++|||||||++|||++|..|+......... .............
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~ 244 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---FGLNVRGFLDRYC 244 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---SSBCHHHHHHHTC
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---HhhhhhccccccC
Confidence 346899999999999999999999999999999999999877643211111 1111111111223
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+..+++.+.+++.+||+.||++|||+.++++.|+.++...
T Consensus 245 ~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 4455678999999999999999999999999999998764
No 24
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.4e-48 Score=385.05 Aligned_cols=306 Identities=21% Similarity=0.264 Sum_probs=203.2
Q ss_pred cccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+.+.+.||+|+||.||+|... ++..||||+++..... ..+.|.+|+.++++++||||+++++++...+..++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 4677888999999999999854 5778999999765322 2457999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 126 e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 126 EYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp ECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred eCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 99999999999964 3456999999999999999999999999 9999999999999999999999999998664322
Q ss_pred -----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...+++.|+|||++.+..++.++|||||||++|||++ |+.|+........ ...+........+..++..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~ 278 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEGYRLPPPMDCPAA 278 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH-----HHHHHTTEECCCCTTCBHH
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCccccHH
Confidence 1234678999999999999999999999999999998 8888765432211 1111122223344566788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCCCCccCCC--CCC---CCCCCcccccCcchhhhhchhhhHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGI--PHG---TASTKQTITLTPLGEACSRLDLTAIHEIL 356 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 356 (488)
+.+++.+||+.||.+||++.++++.|+.+.............. +.. ...........+...|...+.+....+.|
T Consensus 279 l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 358 (373)
T 2qol_A 279 LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDWLNGVWTAHCKEIF 358 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGGGGGSBCCC----CCCEEC----------------------------
T ss_pred HHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCccccccccCCCCCCcccccCCCCccccCCCCHHHHHHhccchHHHHHH
Confidence 9999999999999999999999999999876532211111100 100 01111122233455677777777788888
Q ss_pred HhhcccCchhh
Q 011349 357 EKVGYKDDEGI 367 (488)
Q Consensus 357 ~~~~~~~~~~~ 367 (488)
...|+.+.+.+
T Consensus 359 ~~~~~~~~~~~ 369 (373)
T 2qol_A 359 TGVEYSSCDTI 369 (373)
T ss_dssp -----------
T ss_pred HhcCCCcHHHH
Confidence 87777766543
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=9.7e-48 Score=371.14 Aligned_cols=262 Identities=21% Similarity=0.303 Sum_probs=207.8
Q ss_pred cCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
-.+..+.+++.||+|+||.||+|.. +|+.||||++....... .+.+.+|+.++++++||||+++++++...+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3455778899999999999999987 68889999997655332 34789999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 129 AEFMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
|||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 99999999999996321 123999999999999999999999986 4999999999999999999999999999754432
Q ss_pred ----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 ----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... ...........+...++++
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l 268 (309)
T 3p86_A 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA----AVGFKCKRLEIPRNLNPQV 268 (309)
T ss_dssp ---------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH----HHHHSCCCCCCCTTSCHHH
T ss_pred ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHhcCCCCCCCccCCHHH
Confidence 34578999999999999999999999999999999999999886543221111 1111112234455677889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
.+|+.+||+.||.+|||+.++++.|+.+.+...++
T Consensus 269 ~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999998765433
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.3e-48 Score=371.66 Aligned_cols=247 Identities=18% Similarity=0.242 Sum_probs=209.9
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...|.+++.||+|+||.||+|. ..+++.||||++........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 3467889999999999999999 467999999999876656677899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
++||+|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 999999999963 46999999999999999999999999 999999999999999999999999998765433 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||+||..||............. .........+...+..+.+++.
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHCSCCCSCGGGSCHHHHHHHH
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCCCCCCCccccCHHHHHHHH
Confidence 4578999999999999999999999999999999999999886542211110000 0011112234456788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||+.||++|||+.++++|
T Consensus 252 ~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHSCSSTTTSCCHHHHTTC
T ss_pred HHccCChhHCcCHHHHhhC
Confidence 9999999999999999987
No 27
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.8e-47 Score=367.82 Aligned_cols=263 Identities=19% Similarity=0.217 Sum_probs=218.5
Q ss_pred cccCHHHHHHHhcCCCc-------ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC
Q 011349 39 REFNLDQLRAATSGFCA-------DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE 110 (488)
Q Consensus 39 ~~~~~~~~~~~~~~~~~-------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 110 (488)
..|+++++..+++.... +...+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 56899999999876432 345567899999999999965 7999999999877666677899999999999999
Q ss_pred CCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC
Q 011349 111 RLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG 190 (488)
Q Consensus 111 niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~ 190 (488)
||+++++++...+..++||||++|++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCC
Confidence 99999999999999999999999999999984 456999999999999999999999999 99999999999999999
Q ss_pred CCeeccCCCcccCCCC----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc
Q 011349 191 NPRLSCFGLMKNSRDG----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 191 ~~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 266 (488)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+....
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~ 257 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRDSP 257 (321)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSS
T ss_pred cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhcCC
Confidence 9999999998765432 34578999999999999899999999999999999999999886542221111 000000
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+ ........++.+.+++.+||+.||++|||+.+++++-.
T Consensus 258 ~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 297 (321)
T 2c30_A 258 PP--KLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297 (321)
T ss_dssp CC--CCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred CC--CcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 00 01122345678999999999999999999999998743
No 28
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=9.8e-48 Score=373.80 Aligned_cols=246 Identities=19% Similarity=0.266 Sum_probs=208.9
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
..+.|.+++.||+|+||.||+|.+ .+|+.||||++...... ..+.+.+|+.+|+.++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 345678999999999999999995 67999999999754322 245688999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 93 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 93 MEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp ECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred EECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 999999999999963 456999999999999999999999999 999999999999999999999999999865543
Q ss_pred -CccccccCCCCccccccCCcc-cCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~-~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
....||+.|+|||.+.+..++ .++|||||||++|+|+||+.||.+........... .. ....+...++++.+
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~----~~--~~~~p~~~s~~~~~ 243 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL----RG--KYRIPFYMSTDCEN 243 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HC--CCCCCTTSCHHHHH
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH----hC--CCCCCCCCCHHHHH
Confidence 345789999999999887765 79999999999999999999987654332221111 11 11234456788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
|+.+||..||.+|||+.++++|
T Consensus 244 li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 244 LLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHCCCChhHCcCHHHHhcC
Confidence 9999999999999999999987
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.2e-47 Score=360.29 Aligned_cols=252 Identities=22% Similarity=0.296 Sum_probs=214.1
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+.+++.||+|+||.||+|...+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 4678889999999999999998888899999998654 345789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 208 (488)
+++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ..
T Consensus 89 ~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 89 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9999999964 3456999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+|+.|+|||.+.+..++.++||||||+++|+|+| |..||.......... .+........+...++.+.+++.
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~ 241 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-----DISTGFRLYKPRLASTHVYQIMN 241 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HHHTTCCCCCCTTSCHHHHHHHH
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHH-----HHhcCccCCCCCcCCHHHHHHHH
Confidence 456778999999998999999999999999999999 887776543222111 11111222334445788999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+||+.||++|||+.+++++|+.+...
T Consensus 242 ~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHccCCcccCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999988764
No 30
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.6e-47 Score=375.62 Aligned_cols=254 Identities=20% Similarity=0.311 Sum_probs=211.5
Q ss_pred CcccccccCCCCCCceEEEEEe--------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV--------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 123 (488)
+.+.+++.||+|+||.||+|.. .++..||||+++..... ..+.+.+|+.+++++ +||||+++++++...+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 4567888999999999999984 23567999999765322 245799999999999 8999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
..++||||++||+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 239 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTT
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCC
Confidence 9999999999999999997532 235899999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |..||....... .
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~-----~ 314 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-----L 314 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----H
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-----H
Confidence 99999999999865432 23345788999999999999999999999999999999 888776542221 1
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
...+........+..++.++.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 315 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 112222223345556778999999999999999999999999999988654
No 31
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.3e-47 Score=370.31 Aligned_cols=245 Identities=18% Similarity=0.219 Sum_probs=208.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCC---CCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRS---AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+.+++.||+|+||.||+|.. .+|+.||||+++.. .......+.+|+.+|+.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 4678899999999999999995 46999999999753 2234567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 161 (337)
T 1o6l_A 85 EYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161 (337)
T ss_dssp ECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence 99999999999873 456999999999999999999999999 99999999999999999999999999986432
Q ss_pred CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 206 GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............ ... ...++...++++.++
T Consensus 162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i----~~~--~~~~p~~~s~~~~~l 235 (337)
T 1o6l_A 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI----LME--EIRFPRTLSPEAKSL 235 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCTTSCHHHHHH
T ss_pred ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH----HcC--CCCCCCCCCHHHHHH
Confidence 23567899999999999999999999999999999999999998754332211111 111 123445567889999
Q ss_pred HHHhccCCCCCCC-----CHHHHHHHh
Q 011349 286 ASRCLQYEPRERP-----NAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rp-----s~~~il~~l 307 (488)
+.+||+.||.+|| ++.++++|-
T Consensus 236 i~~lL~~dP~~R~g~~~~~~~ei~~h~ 262 (337)
T 1o6l_A 236 LAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp HHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred HHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence 9999999999999 899999883
No 32
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.3e-47 Score=371.33 Aligned_cols=268 Identities=21% Similarity=0.268 Sum_probs=211.1
Q ss_pred cCHHHHHHHhcCCC------cccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCC
Q 011349 41 FNLDQLRAATSGFC------ADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRS 109 (488)
Q Consensus 41 ~~~~~~~~~~~~~~------~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h 109 (488)
.++.+...++..|. .+.+++.||+|+||.||+|.+. .+..||||+++..... ..+.+.+|+.++++++|
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h 109 (325)
T 3kul_A 30 HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109 (325)
T ss_dssp -------------CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCC
T ss_pred ccccCccccchhhccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 34555555555443 5678899999999999999963 3456999999865322 24579999999999999
Q ss_pred CCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 110 ~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
|||+++++++.+++..++||||++|++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 110 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~ 187 (325)
T 3kul_A 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSN 187 (325)
T ss_dssp TTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred CCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCC
Confidence 9999999999999999999999999999999964 3457999999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccc
Q 011349 190 GNPRLSCFGLMKNSRDGK-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKN 261 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~ 261 (488)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|||++ |..||.........
T Consensus 188 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~--- 264 (325)
T 3kul_A 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI--- 264 (325)
T ss_dssp CCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH---
T ss_pred CCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHH---
Confidence 999999999998764432 2234678999999998899999999999999999999 88887654322211
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 262 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..+........+..++..+.+|+.+||..||.+|||+.++++.|+.+.....
T Consensus 265 --~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 265 --SSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp --HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred --HHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 1111122333455677899999999999999999999999999999887643
No 33
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-47 Score=372.72 Aligned_cols=246 Identities=20% Similarity=0.224 Sum_probs=201.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 10 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 89 (347)
T 3zgw_A 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89 (347)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 4568889999999999999994 6799999999976542 2345789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
++||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 90 ~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 166 (347)
T 3zgw_A 90 CPGGELFDYIIS--QDRLSEEETRVVFRQIVSAVAYVHSQG-YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166 (347)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCccc
Confidence 999999999863 456999999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||++.+..+ +.++|||||||++|+|++|..||............. .. ....+...++.+.+|
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~----~~--~~~~p~~~s~~~~~l 240 (347)
T 3zgw_A 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM----RG--KYDVPKWLSPSSILL 240 (347)
T ss_dssp -----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HT--CCCCCTTCCHHHHHH
T ss_pred cccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH----cC--CCCCCCCCCHHHHHH
Confidence 24578999999999988775 889999999999999999999987653322211111 11 112344557889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhc
Q 011349 286 ASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+.+||..||.+|||+.++++|-.
T Consensus 241 i~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 241 LQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp HHHHTCSSGGGSCCHHHHHTCHH
T ss_pred HHHHcccCHhHCcCHHHHhcCcc
Confidence 99999999999999999999844
No 34
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.3e-47 Score=359.19 Aligned_cols=253 Identities=20% Similarity=0.278 Sum_probs=212.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
..+.+++.||+|+||.||+|...++..||||+++... ...+.+.+|+.++.+++||||+++++++......++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 3568889999999999999998888889999998655 345779999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 87 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 87 NGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp TCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred CCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9999999964 2345999999999999999999999999 9999999999999999999999999998665432 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+|+.|+|||.+.+..++.++||||||+++|+|+| |..||........... +........+...++.+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~ 239 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK-----VSQGHRLYRPHLASDTIYQIMY 239 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-----HHTTCCCCCCTTSCHHHHHHHH
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH-----HHcCCCCCCCCcChHHHHHHHH
Confidence 345678999999998899999999999999999999 8887754422211111 1111122233445678999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+||+.||.+|||+.+++++|+.+..+.
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 999999999999999999999987653
No 35
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8e-47 Score=362.31 Aligned_cols=257 Identities=17% Similarity=0.202 Sum_probs=210.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 91 (294)
T 4eqm_A 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME 91 (294)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence 578899999999999999994 568999999986544333 3578999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++|++|.+++.. ..++++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 92 YIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp CCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 9999999999973 457999999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||.+.+..++.++|||||||++|+|+||+.||................... .....+...++.+.++
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l 247 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-VTTDVRKDIPQSLSNV 247 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC-HHHHSCTTSCHHHHHH
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC-cchhcccCCCHHHHHH
Confidence 23468999999999999999999999999999999999999987653322211111111111 1112234456889999
Q ss_pred HHHhccCCCCCCC-CHHHHHHHhchhhcccC
Q 011349 286 ASRCLQYEPRERP-NAKSLVASLTPLQKEAE 315 (488)
Q Consensus 286 i~~cl~~dp~~Rp-s~~~il~~l~~~~~~~~ 315 (488)
+.+||+.||.+|| +++++.+.|..+.....
T Consensus 248 i~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 248 ILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp HHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred HHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 9999999999998 99999999988766544
No 36
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=9.7e-46 Score=357.04 Aligned_cols=272 Identities=27% Similarity=0.442 Sum_probs=223.0
Q ss_pred CccccCHHHHHHHhcCCCcccc---cccCCCCCCceEEEEEeCCCcEEEEEEccCCCC----CChHHHHHHHHHHhhcCC
Q 011349 37 GFREFNLDQLRAATSGFCADNI---VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW----PDSRQFLEEARAVGLLRS 109 (488)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~---~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h 109 (488)
.+..|++.++..++++|+...+ .+.||+|+||.||+|.. +++.||||++..... ...+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 3578999999999999986633 26789999999999986 678899999875431 224579999999999999
Q ss_pred CCCcccccceecCCeeeEEEecCCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 110 ~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
|||+++++++.+.+..++||||+++++|.+++... ...++++..++.++.||+.||.|||+.+ ++||||||+||+++.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDE 168 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcC
Confidence 99999999999999999999999999999998642 2456999999999999999999999999 999999999999999
Q ss_pred CCCCeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh----
Q 011349 189 DGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---- 258 (488)
Q Consensus 189 ~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~---- 258 (488)
++.+||+|||+++..... ....||+.|+|||.+.+ .++.++||||||+++|+|+||..|+.........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999998765432 23468999999999875 5889999999999999999999887643211100
Q ss_pred ------ccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 259 ------GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 259 ------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
...+...++... ...+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 001111122211 23456678899999999999999999999999999998754
No 37
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.1e-46 Score=359.21 Aligned_cols=252 Identities=22% Similarity=0.307 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
..+.+++.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++.+++||||+++++++.+.+..++||||++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 4568889999999999999998888899999998654 345789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 208 (488)
+++|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 103 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 103 NGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp TCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9999999964 2456999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||.......... .+........+...++.+.+++.
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~ 255 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-----HIAQGLRLYRPHLASEKVYTIMY 255 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-----HHHTTCCCCCCTTCCHHHHHHHH
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH-----HHhcccCCCCCCcCCHHHHHHHH
Confidence 455788999999998899999999999999999998 888876543221111 11111222334445688999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+||+.||.+|||+.+++++|..+..+
T Consensus 256 ~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 256 SCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHccCChhHCcCHHHHHHHHHHHhhc
Confidence 99999999999999999999988754
No 38
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8e-47 Score=371.76 Aligned_cols=247 Identities=16% Similarity=0.148 Sum_probs=205.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.|.+++.||+|+||.||+|.. .+|+.||||+++..... ..+.+.+|+.+|++++||||+++++++.+....++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 468889999999999999995 46899999999765422 24679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNS 203 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 203 (488)
||||++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp EEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 999999999999996 4567999999999999999999999999 99999999999998777 7999999999876
Q ss_pred CCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 204 RDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 204 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+............... ..........+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~ 247 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY--DFDEEFFSQTSE 247 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTSCH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--CCCchhccCCCH
Confidence 543 355789999999999988999999999999999999999999876532221111000000 000011123467
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+||.+||..||.+|||+.++++|
T Consensus 248 ~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 248 LAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 89999999999999999999999986
No 39
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.8e-47 Score=379.68 Aligned_cols=253 Identities=24% Similarity=0.346 Sum_probs=211.5
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.+.+.+.||+|+||.||+|.+. +++.||||+++..... ..+.|.+|+.+|++++||||+++++++...+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 35567889999999999999965 7899999999754322 234688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+++|+|.+++.. .+..+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 194 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 194 VQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 999999999964 3346999999999999999999999999 9999999999999999999999999998654321
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...+++.|+|||.+.++.++.++|||||||++|||+| |..|+........ ...+........+..++..+.+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~ 346 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-----REFVEKGGRLPCPELCPDAVFR 346 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH-----HHHHHTTCCCCCCTTCCHHHHH
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHH
Confidence 2234678999999998899999999999999999998 8877765432211 1112222233445567789999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 285 LASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
|+.+||+.||++|||+.++++.|+.+.+.
T Consensus 347 li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 347 LMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999988764
No 40
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.5e-46 Score=381.59 Aligned_cols=252 Identities=22% Similarity=0.320 Sum_probs=212.6
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC-eeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE-ERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~ 131 (488)
...+.+++.||+|+||.||+|.+ .|+.||||+++... ..+.|.+|+.+|++++||||+++++++.... ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 45678889999999999999987 47789999998654 4678999999999999999999999987655 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Cccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 210 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 210 (488)
+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 347 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 347 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------C
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCC
Confidence 99999999998654555899999999999999999999999 999999999999999999999999999865432 2345
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+++.|+|||.+.+..++.++|||||||++|||+| |+.|+....... ....+....+...+..+++.+.+|+.+|
T Consensus 348 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-----~~~~i~~~~~~~~p~~~~~~l~~li~~c 422 (450)
T 1k9a_A 348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPRVEKGYKMDAPDGCPPAVYDVMKNC 422 (450)
T ss_dssp CCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-----HHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence 6789999999999999999999999999999998 888876532211 1111222233345667789999999999
Q ss_pred ccCCCCCCCCHHHHHHHhchhhcc
Q 011349 290 LQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
|+.||.+|||+.++++.|+.+...
T Consensus 423 l~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 423 WHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCCChhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999999988764
No 41
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.9e-47 Score=364.71 Aligned_cols=259 Identities=19% Similarity=0.301 Sum_probs=210.0
Q ss_pred CcccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC--Ceee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 126 (488)
..+.+++.||+|+||.||+|.+ .+++.||||++........+.+.+|+.++++++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 3568889999999999999984 35889999999866544456899999999999999999999998653 4589
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 90 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 99999999999999965 3345999999999999999999999999 999999999999999999999999999865432
Q ss_pred C-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh---cc--------cccccccc
Q 011349 207 K-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---GK--------NFLMLMDS 268 (488)
Q Consensus 207 ~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~---~~--------~~~~~~~~ 268 (488)
. ...+++.|+|||.+.+..++.++|||||||++|||+||..|+......... .. .....+..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 2 234567899999999999999999999999999999999876543222110 00 11111222
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
......+..+++++.+++.+||+.||++|||+.++++.|+.+....
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 2233445667889999999999999999999999999999987653
No 42
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.6e-47 Score=369.57 Aligned_cols=255 Identities=17% Similarity=0.239 Sum_probs=203.6
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC----eeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE----ERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 129 (488)
..+.+++.||+|+||.||+|.+. ++.||||++.... .....+.+|+.++++++||||+++++++.... ..++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 45788899999999999999874 7889999996543 22345677999999999999999999998744 469999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CCcccccccCCceeecCCCCCeeccCCC
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK----------GRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 102 e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 102 AFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCc
Confidence 99999999999953 4599999999999999999999998 8 99999999999999999999999999
Q ss_pred cccCCCC------CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh-------h---
Q 011349 200 MKNSRDG------KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-------R--- 258 (488)
Q Consensus 200 a~~~~~~------~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~-------~--- 258 (488)
++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+...... .
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9754432 23568999999999986 3567789999999999999999988764311100 0
Q ss_pred -ccccc-cccccccCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 259 -GKNFL-MLMDSCLEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 259 -~~~~~-~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..... ........+.. ....+.++.+|+.+||+.||++|||+.++++.|+.+....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 00000 00111111111 1235677999999999999999999999999999987653
No 43
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.5e-47 Score=383.59 Aligned_cols=252 Identities=20% Similarity=0.301 Sum_probs=213.2
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+|++++||||+++++++. .+..++||||+++
T Consensus 189 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~ 266 (454)
T 1qcf_A 189 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAK 266 (454)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTT
T ss_pred HeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCC
Confidence 457788999999999999998888899999998654 45778999999999999999999999986 6678999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Ccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KSY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~~ 209 (488)
|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 267 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 345 (454)
T 1qcf_A 267 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 345 (454)
T ss_dssp CBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSS
T ss_pred CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCC
Confidence 99999997433346899999999999999999999999 999999999999999999999999999876432 233
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.+|+.|+|||.+.+..++.++|||||||++|||+| |+.|+......... ..+....+...+..+++++.+|+.+
T Consensus 346 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~li~~ 420 (454)
T 1qcf_A 346 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-----RALERGYRMPRPENCPEELYNIMMR 420 (454)
T ss_dssp SSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred cccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 45778999999998899999999999999999999 88887654322211 1111122333455678899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhccc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
||+.||++|||+.+|++.|+.+....
T Consensus 421 cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 421 CWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HccCChhHCcCHHHHHHHHHHHHhcc
Confidence 99999999999999999999887643
No 44
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.4e-46 Score=370.91 Aligned_cols=253 Identities=18% Similarity=0.105 Sum_probs=198.3
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
....|.+++.||+|+||+||++... +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 4567899999999999999999954 78999999997654 334678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC--CeeccCCCcccCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--PRLSCFGLMKNSRD--- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~~~~--- 205 (488)
|++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 9999999999863 456999999999999999999999999 999999999999987765 99999999874332
Q ss_pred CCccccccCCCCccccccCCcccC-CceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 206 GKSYSTNLAFTPPEYLRTGRVIPE-SVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~~~~~-sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...............+.............++.+.+
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 253 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHH
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHH
Confidence 235578999999999988777655 9999999999999999998865422111111111111111111112235688999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhc
Q 011349 285 LASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
|+.+||..||.+|||+.++++|-.
T Consensus 254 li~~~L~~dP~~Rps~~ell~hp~ 277 (361)
T 3uc3_A 254 LISRIFVADPATRISIPEIKTHSW 277 (361)
T ss_dssp HHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred HHHHHccCChhHCcCHHHHHhCcc
Confidence 999999999999999999999843
No 45
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.5e-46 Score=385.73 Aligned_cols=253 Identities=21% Similarity=0.331 Sum_probs=215.6
Q ss_pred CcccccccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..+.+.+.||+|+||.||+|.+.. +..||||+++... ...+.|.+|+.+|++++||||+++++++...+..++||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 346778899999999999999654 8899999998654 35678999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 9999999997655667999999999999999999999999 9999999999999999999999999998764322
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+++.|+|||.+.+..++.++|||||||++|||+| |..|+...... .....+....+...+..++..+.+|+
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li 452 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDYRMERPEGCPEKVYELM 452 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2345678999999998899999999999999999999 88777654222 11222223333445566788999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+||+.||.+|||+.+|++.|+.+...
T Consensus 453 ~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 453 RACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999877543
No 46
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-46 Score=359.96 Aligned_cols=246 Identities=17% Similarity=0.209 Sum_probs=198.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--------------------------ChHHHHHHHHHHh
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--------------------------DSRQFLEEARAVG 105 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 105 (488)
.+.|.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 45678899999999999999994 56889999999754321 1356899999999
Q ss_pred hcCCCCCcccccceec--CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCc
Q 011349 106 LLRSERLVNLIGCCCE--GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183 (488)
Q Consensus 106 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~N 183 (488)
+++||||+++++++.+ .+..++||||+++++|.+++ ....+++..+..++.||+.||.|||+.+ |+||||||+|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~N 167 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSN 167 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHH
Confidence 9999999999999976 56799999999999999876 4567999999999999999999999999 9999999999
Q ss_pred eeecCCCCCeeccCCCcccCCCC----CccccccCCCCccccccCC---cccCCceEeehHHHHHHhhCCCCCCcchhhh
Q 011349 184 ILFDQDGNPRLSCFGLMKNSRDG----KSYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDL 256 (488)
Q Consensus 184 ill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~il~el~tg~~p~~~~~~~~ 256 (488)
||++.++.+||+|||+++..... ....||+.|+|||.+.+.. .+.++|||||||++|+|++|+.||.......
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 99999999999999999866543 2457899999999998754 3778999999999999999999886543221
Q ss_pred hhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 257 IRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... +.............++++.+++.+||+.||++|||+.++++|
T Consensus 248 ~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 248 LHSK----IKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HHHH----HHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HHHH----HhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1111 111111111223456789999999999999999999999876
No 47
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-46 Score=362.77 Aligned_cols=245 Identities=18% Similarity=0.229 Sum_probs=208.9
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+++.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 34678899999999999999995 469999999997532 23456788999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-C
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-K 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 207 (488)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 999999999999973 456999999999999999999999999 999999999999999999999999999876543 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||++|..||.......... .+... ...++...+.++.+++.
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE----KILNA--ELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHHC--CCCCCTTSCHHHHHHHH
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH----HHHhC--CCCCCCCCCHHHHHHHH
Confidence 5678999999999999999999999999999999999999986543221111 11111 11244556788999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 011349 288 RCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rp-----s~~~il~~ 306 (488)
+||..||.+|| +++++++|
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhccCHHHcCCCcCCCHHHHhcC
Confidence 99999999999 89999987
No 48
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.2e-47 Score=364.15 Aligned_cols=255 Identities=22% Similarity=0.321 Sum_probs=208.6
Q ss_pred CcccccccCCCCCCceEEEEEeC-CC-------cEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-ED-------RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
..+.+++.||+|+||.||+|... ++ ..||+|++........+.+.+|+.++++++||||+++++++.+++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 35678889999999999999843 34 46999999766555567899999999999999999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC--------CeeccC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--------PRLSCF 197 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~--------~kl~Df 197 (488)
++||||++|++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+||
T Consensus 88 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccC
Confidence 999999999999999974 3344999999999999999999999999 999999999999998887 999999
Q ss_pred CCcccCCCCCccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 198 GLMKNSRDGKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 198 gla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
|++..........+|+.|+|||.+.+ ..++.++|||||||++|||+||..|+............. . .....+.
T Consensus 166 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~----~--~~~~~~~ 239 (289)
T 4fvq_A 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY----E--DRHQLPA 239 (289)
T ss_dssp CSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH----H--TTCCCCC
T ss_pred cccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh----h--ccCCCCC
Confidence 99987766666678999999999987 678999999999999999999766654332111111000 0 0112233
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCC
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 316 (488)
..+.++.+++.+||+.||.+|||+.+++++|+.+......
T Consensus 240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 3456789999999999999999999999999988876543
No 49
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=7.3e-46 Score=357.77 Aligned_cols=257 Identities=19% Similarity=0.224 Sum_probs=204.8
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+.+.+.||+|+||.||+|.... .+|||+++..... ..+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 3467888999999999999998533 4899998764432 2357899999999999999999999764 566899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|++|++|.+++.. ....+++.+++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 112 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 112 WCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred cCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 9999999999864 4567999999999999999999999999 99999999999999999999999999975432
Q ss_pred -CCccccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 206 -GKSYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 206 -~~~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
.....||+.|+|||.+. +..++.++|||||||++|||+||+.||............................+++.
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKA 269 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHH
T ss_pred cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHH
Confidence 12456899999999986 56788999999999999999999998865322111000000000111111233456788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+.+++.+||+.+|++|||+.+++++|+.++...
T Consensus 270 l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp HHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999887653
No 50
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.8e-46 Score=372.58 Aligned_cols=250 Identities=17% Similarity=0.255 Sum_probs=205.4
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
+...+.+++.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|..++.++ +|||||++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 345678999999999999999995 4688999999975432 2234688999999988 8999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD- 205 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 205 (488)
+||||++||+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++....
T Consensus 130 lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999873 456999999999999999999999999 99999999999999999999999999986322
Q ss_pred ---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----cccccccccCCCCChh
Q 011349 206 ---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----FLMLMDSCLEGHFSND 277 (488)
Q Consensus 206 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 277 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............ ...+.. ....++..
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~ 284 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRS 284 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTT
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCc
Confidence 23567899999999999999999999999999999999999998543211110000 001111 12234556
Q ss_pred hHHHHHHHHHHhccCCCCCCCCH------HHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERPNA------KSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~------~~il~~ 306 (488)
.+.++.+|+.+||+.||.+||++ .++++|
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 77889999999999999999985 688877
No 51
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-46 Score=365.84 Aligned_cols=249 Identities=16% Similarity=0.175 Sum_probs=207.3
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+..|.+++.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 35678899999999999999995 468899999997543 3455789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC--CCCCeeccCCCcccCCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ--DGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~-- 207 (488)
++||+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 999999999963 3356999999999999999999999999 999999999999987 7899999999998765543
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC--CCChhhHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGTELVR 284 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 284 (488)
...||+.|+|||++.+..++.++|||||||++|+|++|..||........... +....... ......+.++.+
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN----IMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHTCCCCCHHHHTTSCHHHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHH----HHcCCCCCChhhhccCCHHHHH
Confidence 34689999999999988899999999999999999999999876433221111 11110000 001134678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhc
Q 011349 285 LASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
++.+||..||.+|||+.++++|-.
T Consensus 237 li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 237 FVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHcCCChhHCcCHHHHhcChh
Confidence 999999999999999999999743
No 52
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.7e-46 Score=354.28 Aligned_cols=251 Identities=21% Similarity=0.279 Sum_probs=199.7
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC----ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP----DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+++.+.+.+.||+|+||.||+|.+ .++.||||+++..... ..+.+.+|+.+++.++||||+++++++..++..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 456778899999999999999997 4888999998764322 24678999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccccccCCceeecC--------CCCCeeccC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQ--------DGNPRLSCF 197 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~iiH~Dlkp~Nill~~--------~~~~kl~Df 197 (488)
||||++|++|.+++. ...+++..++.++.|++.||.|||+.+ +++||||||+||+++. ++.+||+||
T Consensus 84 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999984 567999999999999999999999987 3789999999999985 778999999
Q ss_pred CCcccCCCC--CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 198 GLMKNSRDG--KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 198 gla~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
|+++..... ....||+.|+|||.+.+..++.++||||||+++|+|+||+.||.......... ...........+
T Consensus 161 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~ 236 (271)
T 3dtc_A 161 GLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY----GVAMNKLALPIP 236 (271)
T ss_dssp CC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH----HHHTSCCCCCCC
T ss_pred CcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----hhhcCCCCCCCC
Confidence 999865433 24578999999999998889999999999999999999999887543222111 111112223345
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
..+++.+.+++.+||+.||.+|||+.+++++|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 56678899999999999999999999999999764
No 53
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6.2e-47 Score=371.59 Aligned_cols=245 Identities=19% Similarity=0.254 Sum_probs=204.4
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+.+++.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|..++..+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 45678999999999999999995 468999999997532 22345688999999998 69999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 9999999999999973 456999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|..||........... +... ...++...+..+.
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~ 252 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA----ILND--EVVYPTWLHEDAT 252 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHH
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHH
Confidence 2356789999999999988899999999999999999999999876533222111 1111 1223445678899
Q ss_pred HHHHHhccCCCCCCCCH------HHHHHH
Q 011349 284 RLASRCLQYEPRERPNA------KSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~------~~il~~ 306 (488)
+++.+||..||.+||++ .++++|
T Consensus 253 ~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 253 GILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 99999999999999998 888886
No 54
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.5e-46 Score=380.14 Aligned_cols=252 Identities=24% Similarity=0.309 Sum_probs=209.2
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.+.||+|+||.||+|.+..+..||||+++... ...+.|.+|+.+|++++||||+++++++.. +..++||||+++
T Consensus 185 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~ 262 (452)
T 1fmk_A 185 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 262 (452)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred HceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcC
Confidence 456788899999999999998888889999998654 346789999999999999999999999865 778999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
|+|.+++....+..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 263 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 341 (452)
T 1fmk_A 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341 (452)
T ss_dssp CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCC
Confidence 99999997534456999999999999999999999999 9999999999999999999999999998654321 23
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.+++.|+|||.+.+..++.++|||||||++|||+| |+.|+.+....... ..+....+...+..++..+.+|+.+
T Consensus 342 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~li~~ 416 (452)
T 1fmk_A 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-----DQVERGYRMPCPPECPESLHDLMCQ 416 (452)
T ss_dssp -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTSCHHHHHHHHH
T ss_pred cccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 45778999999998999999999999999999999 88887654322111 1111222334455678899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhccc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
||+.||++|||+.++++.|+.+....
T Consensus 417 cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 417 CWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HccCChhhCcCHHHHHHHHHHHhccC
Confidence 99999999999999999999887654
No 55
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.4e-46 Score=362.45 Aligned_cols=246 Identities=16% Similarity=0.142 Sum_probs=204.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
|.+.+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+|++++||||+++++++.+....++|
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 92 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 57888999999999999995 46899999999765422 356799999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccCC
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNSR 204 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~~ 204 (488)
|||++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++...
T Consensus 93 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 93 LELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp EECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred EEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 99999999999996 4567999999999999999999999999 99999999999998887 79999999998764
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
.. ....||+.|+|||++.+..++.++|||||||++|+|++|..||.............. .............+..
T Consensus 170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 247 (326)
T 2y0a_A 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA--VNYEFEDEYFSNTSAL 247 (326)
T ss_dssp TTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH--TCCCCCHHHHTTSCHH
T ss_pred CCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHh--cCCCcCccccccCCHH
Confidence 32 345789999999999988999999999999999999999998865432211110000 0000000111234678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+|+.+||..||.+|||+.++++|
T Consensus 248 ~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 248 AKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCCCHHHHhcC
Confidence 9999999999999999999999987
No 56
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-46 Score=370.18 Aligned_cols=256 Identities=21% Similarity=0.294 Sum_probs=213.2
Q ss_pred CcccccccCCCCCCceEEEEEeC--------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD--------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 123 (488)
..+.+.+.||+|+||.||+|... .+..||||+++..... ....+.+|+++++++ +||||+++++++..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 45678899999999999999842 2357999999765422 235789999999999 8999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
..++||||+++|+|.+++.... ...+++.+++.|+.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCC
Confidence 9999999999999999997532 245999999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |..|+........
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~----- 302 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL----- 302 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-----
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----
Confidence 99999999999865432 23356788999999999999999999999999999999 8888765432221
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
...+........+..+++++.+|+.+||+.||++|||+.+++++|+.+.....
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 303 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 11122222333445667889999999999999999999999999999886543
No 57
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-46 Score=372.31 Aligned_cols=254 Identities=21% Similarity=0.312 Sum_probs=209.6
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+++.||+|+||.||+|.+. +++.||||+++.... .....+.+|+.++++++||||+++++++......++
T Consensus 72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 151 (367)
T 3l9p_A 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 151 (367)
T ss_dssp GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEE
Confidence 4678899999999999999843 466899999975432 224478999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeeccCCC
Q 011349 128 VAEFMPNETLSKHLFHWE-----NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGL 199 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgl 199 (488)
||||++||+|.+++.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 999999999999997532 245999999999999999999999999 99999999999998554 599999999
Q ss_pred cccC------CCCCccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCC
Q 011349 200 MKNS------RDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 200 a~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
++.. .......+|+.|+|||++.+..++.++|||||||++|||+| |..||......... ..+......
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~-----~~i~~~~~~ 305 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL-----EFVTSGGRM 305 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTCCC
T ss_pred ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCC
Confidence 8743 22334567899999999998999999999999999999998 88877654322211 111111222
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..+..++..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 306 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 306 DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 344556788999999999999999999999999999887754
No 58
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.4e-46 Score=369.42 Aligned_cols=249 Identities=18% Similarity=0.219 Sum_probs=206.7
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+++.|.+++.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+|+.++|||||++++++.+.+..++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 356778999999999999999994 468899999986432 2345678999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+.||+|.+++. ....+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+||+|||+++.....
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999999999997 4567999999999999999999999999 999999999999999999999999999865433
Q ss_pred --CccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 207 --KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
....||+.|+|||++.+ ..++.++|||||||++|||++|..||......... .....+. .....++...+..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--~~~~~~~-~~~~~~p~~~s~~ 246 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK--EIVHTFE-TTVVTYPSAWSQE 246 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH--HHHHHHH-HCCCCCCTTSCHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH--HHHHHHh-hcccCCCCcCCHH
Confidence 35678999999999974 45899999999999999999999998643211100 0000000 1112345566789
Q ss_pred HHHHHHHhccCCCCCCCC-HHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPN-AKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps-~~~il~~ 306 (488)
+.+|+.+||..||.+||+ +++++.|
T Consensus 247 ~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 247 MVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 999999999999999998 7777765
No 59
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.6e-46 Score=362.53 Aligned_cols=256 Identities=15% Similarity=0.141 Sum_probs=208.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+.+++.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++++ +||||+++++++..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 467889999999999999994 679999999987553 235689999999999 8999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC-----CeeccCCCcccCCCC-
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-----PRLSCFGLMKNSRDG- 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfgla~~~~~~- 206 (488)
+++|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 88 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 88 -GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 89999999752 567999999999999999999999999 999999999999998887 999999999864322
Q ss_pred ----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc---CCC
Q 011349 207 ----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL---EGH 273 (488)
Q Consensus 207 ----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~ 273 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ....+..... ...
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~-~~~~i~~~~~~~~~~~ 243 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE-RYQKIGDTKRATPIEV 243 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH-HHHHHHHHHHHSCHHH
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH-HHHHHHhhhccCCHHH
Confidence 34578999999999999999999999999999999999999986532111000 0000000000 000
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
.....| ++.+++.+||+.||.+||++.+|++.|+.+.......
T Consensus 244 ~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~ 286 (330)
T 2izr_A 244 LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYM 286 (330)
T ss_dssp HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 111234 8999999999999999999999999999887765443
No 60
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.7e-46 Score=359.79 Aligned_cols=248 Identities=18% Similarity=0.230 Sum_probs=198.0
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhh--cCCCCCcccccceec----CCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGL--LRSERLVNLIGCCCE----GEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~----~~~~~lv 128 (488)
.+.+++.||+|+||.||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....++|
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 567889999999999999987 7888999998653 34567777777777 789999999998654 3468999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS--------SKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
|||+++|+|.+++. ...+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 85 ~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 85 THYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp ECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred hhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 99999999999994 457999999999999999999999 888 999999999999999999999999998
Q ss_pred ccCCCC--------CccccccCCCCccccccC------CcccCCceEeehHHHHHHhhC----------CCCCCcchhhh
Q 011349 201 KNSRDG--------KSYSTNLAFTPPEYLRTG------RVIPESVVYSFGTLLLDLLSG----------KHIPPSHALDL 256 (488)
Q Consensus 201 ~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDv~slG~il~el~tg----------~~p~~~~~~~~ 256 (488)
+..... ....||+.|+|||++.+. .++.++|||||||++|||+|| ..||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 754332 233789999999999876 566799999999999999999 66664321110
Q ss_pred hhccccccc-cccccCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 257 IRGKNFLML-MDSCLEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 257 ~~~~~~~~~-~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
......... ........ .+...++.+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 000000000 00011111 2234678899999999999999999999999999876
No 61
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.7e-46 Score=359.87 Aligned_cols=252 Identities=21% Similarity=0.246 Sum_probs=201.5
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
-...|.+++.||+|+||.||+|...+|+.||||++....... ...+.+|+.++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 346789999999999999999998889999999997554222 357899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||++ ++|.+.+.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 99 e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 99 EFME-KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp ECCS-EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred cCCC-CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 9998 588887764 3456999999999999999999999999 999999999999999999999999999865422
Q ss_pred -CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-----------cc---------
Q 011349 207 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-----------LM--------- 264 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-----------~~--------- 264 (488)
....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||............. ..
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhh
Confidence 24467999999999876 568999999999999999999999886542211100000 00
Q ss_pred ----ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 ----LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 ----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..............++++.+|+.+||+.||.+|||+.++++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000000112345788999999999999999999999986
No 62
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.8e-46 Score=365.11 Aligned_cols=252 Identities=17% Similarity=0.268 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcE----EEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRW----IAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+.+.+++.||+|+||.||+|.+ .+++. ||+|.+.... ......+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 4578889999999999999994 44554 8888876443 233457889999999999999999999885 567899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 92 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 9999999999999964 3457999999999999999999999999 9999999999999999999999999998764332
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...+|+.|+|||++.+..++.++|||||||++|||+| |..||....... ....+........+..++.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 244 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-----VPDLLEKGERLAQPQICTI 244 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH-----HHHHHHTTCBCCCCTTBCT
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH-----HHHHHHcCCCCCCCCcCcH
Confidence 3456789999999998999999999999999999999 998876542211 1111222222333445567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
++.+++.+||..||.+|||+.+++++|+.+...
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 789999999999999999999999999988664
No 63
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.5e-46 Score=361.76 Aligned_cols=249 Identities=18% Similarity=0.145 Sum_probs=203.9
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+..|.+++.||+|+||.||+|... +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 456789999999999999999954 7899999999754422 24578999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999999996 4567999999999999999999999999 99999999999999999999999999975432
Q ss_pred -CCccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 -GKSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 -~~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.....||+.|+|||++.+..+ +.++|||||||++|+|+||+.||.......... ................+..+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY---SDWKEKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH---HHHHTTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH---HHHhcccccCCccccCCHHHH
Confidence 124578999999999987765 789999999999999999999986532211110 001111111111234567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+|+.+||..||.+|||+.+++++-
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred HHHHHHccCChhhCcCHHHHhhCh
Confidence 999999999999999999999874
No 64
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-45 Score=355.23 Aligned_cols=256 Identities=19% Similarity=0.268 Sum_probs=203.0
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
++..+.+.+.||+|+||.||+|.+ .++.||||++... ...+.+.+|+.++++++||||+++++++. +..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 345678889999999999999987 4788999999643 24567999999999999999999999886 348999999
Q ss_pred CCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCCcccccccCCceeecCCCC-CeeccCCCcccCCCC
Q 011349 132 MPNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYCSS---KGRALYHDLNTYRILFDQDGN-PRLSCFGLMKNSRDG 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~---~~~iiH~Dlkp~Nill~~~~~-~kl~Dfgla~~~~~~ 206 (488)
++|++|.+++..... ..+++..++.++.||+.||.|||+ ++ |+||||||+|||++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999974322 247899999999999999999999 77 999999999999998887 799999999765432
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||.......... ............+...+..+.++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l 236 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI---MWAVHNGTRPPLIKNLPKPIESL 236 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH---HHHHHTTCCCCCBTTCCHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH---HHHHhcCCCCCcccccCHHHHHH
Confidence 34568999999999999899999999999999999999999886432111100 00001111223344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhchhhcccCC
Q 011349 286 ASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 316 (488)
+.+||+.||.+|||+.++++.|+.+......
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999998876543
No 65
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-46 Score=364.92 Aligned_cols=246 Identities=19% Similarity=0.199 Sum_probs=206.8
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.++.|.+++.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++...+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 346788999999999999999995 678999999986431 2234578999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+ +|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99999 6899988863 456999999999999999999999999 999999999999999999999999999866543
Q ss_pred --CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....||+.|+|||.+.+..+ ++++|||||||++|+|++|+.||......... ..+.. .....+...++.+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-----~~i~~-~~~~~p~~~s~~~~ 236 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----KKVNS-CVYVMPDFLSPGAQ 236 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-----CCCCS-SCCCCCTTSCHHHH
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-----HHHHc-CCCCCcccCCHHHH
Confidence 35578999999999988776 68999999999999999999988654222111 11111 11234455678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+|+.+||..||.+|||+.+++++-
T Consensus 237 ~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 237 SLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp HHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred HHHHHHcCCChhHCcCHHHHHhCh
Confidence 999999999999999999999874
No 66
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-46 Score=365.63 Aligned_cols=263 Identities=23% Similarity=0.281 Sum_probs=214.3
Q ss_pred HHHHhcCCCcccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccc
Q 011349 46 LRAATSGFCADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGC 118 (488)
Q Consensus 46 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~ 118 (488)
+....-..+.+.+++.||+|+||.||+|... +++.||||+++...... .+.+.+|+.++++++||||++++++
T Consensus 39 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 118 (343)
T 1luf_A 39 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV 118 (343)
T ss_dssp HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred cceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3333444456788999999999999999963 35789999998654222 4579999999999999999999999
Q ss_pred eecCCeeeEEEecCCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 011349 119 CCEGEERLLVAEFMPNETLSKHLFHWE----------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALY 176 (488)
Q Consensus 119 ~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH 176 (488)
+.+++..++||||+++|+|.+++.... ...+++.+++.++.||+.||.|||+++ |+|
T Consensus 119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH 197 (343)
T 1luf_A 119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVH 197 (343)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCC
T ss_pred EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eec
Confidence 999999999999999999999997532 257999999999999999999999999 999
Q ss_pred ccccCCceeecCCCCCeeccCCCcccCCC------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCC
Q 011349 177 HDLNTYRILFDQDGNPRLSCFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIP 249 (488)
Q Consensus 177 ~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~ 249 (488)
|||||+|||++.++.+||+|||+++.... .....+|+.|+|||.+.+..++.++|||||||++|||+| |..||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999875432 224467889999999998899999999999999999999 88887
Q ss_pred CcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 250 PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.......... .+........+..++..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 278 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 278 YGMAHEEVIY-----YVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TTSCHHHHHH-----HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCCChHHHHH-----HHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 6543222111 11111112344566788999999999999999999999999999987754
No 67
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1e-45 Score=373.21 Aligned_cols=248 Identities=18% Similarity=0.188 Sum_probs=204.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||+|.. .+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~ 91 (444)
T 3soa_A 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL 91 (444)
T ss_dssp HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEe
Confidence 468889999999999999984 57899999999765432 235689999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec---CCCCCeeccCCCcccCCCCC-
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~~- 207 (488)
++||+|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++......
T Consensus 92 ~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 92 VTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp CBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 999999999873 466999999999999999999999999 99999999999998 56789999999998765432
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...||+.|+|||++.+..++.++|||||||++|+|++|.+||.................+ .........++++.+
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 246 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--FPSPEWDTVTPEAKD 246 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHH
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC--CCccccccCCHHHHH
Confidence 457899999999999889999999999999999999999998765332221111110000 111111245688999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
|+.+||+.||.+|||+.++++|-
T Consensus 247 li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 247 LINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp HHHHHSCSSTTTSCCHHHHHHSC
T ss_pred HHHHHcCCChhHCCCHHHHhcCc
Confidence 99999999999999999999983
No 68
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8.1e-46 Score=355.03 Aligned_cols=250 Identities=19% Similarity=0.211 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
..|.+++.||+|+||+||+|.. .+++.||||++....... ...+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4678899999999999999995 468999999997654322 3678899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|+++ +|.+.+.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9975 66665543 4567999999999999999999999999 999999999999999999999999999865422
Q ss_pred CccccccCCCCccccccCC-cccCCceEeehHHHHHHhhCCCCCCcchh-hhhhcc-----------cc---ccccc---
Q 011349 207 KSYSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHAL-DLIRGK-----------NF---LMLMD--- 267 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~il~el~tg~~p~~~~~~-~~~~~~-----------~~---~~~~~--- 267 (488)
....+|+.|+|||.+.+.. ++.++|||||||++|||+||..|+..... ...... .+ ....+
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 3456799999999998765 79999999999999999999887543211 100000 00 00000
Q ss_pred ------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 ------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 ------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...........+..+.+|+.+||+.||++|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000011223456889999999999999999999999987
No 69
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.7e-46 Score=370.56 Aligned_cols=255 Identities=22% Similarity=0.285 Sum_probs=208.2
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC-e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE-E 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-~ 124 (488)
+.+.+++.||+|+||.||+|.+ .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++.+.+ .
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 101 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 101 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence 4568889999999999999973 23578999999765422 235799999999999 7999999999988755 4
Q ss_pred eeEEEecCCCCChhhhhccCCC----------------------------------------------------------
Q 011349 125 RLLVAEFMPNETLSKHLFHWEN---------------------------------------------------------- 146 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 146 (488)
.++||||++||+|.+++.....
T Consensus 102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T 3vhe_A 102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 181 (359)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence 8999999999999999974321
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC------CccccccC
Q 011349 147 ------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KSYSTNLA 214 (488)
Q Consensus 147 ------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~ 214 (488)
..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....+|+.
T Consensus 182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~ 260 (359)
T 3vhe_A 182 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260 (359)
T ss_dssp --CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred ccchhccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce
Confidence 12899999999999999999999999 999999999999999999999999999865432 23456889
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
|+|||++.+..++.++|||||||++|||+| |..||........ ....+........+...++++.+++.+||+.|
T Consensus 261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 336 (359)
T 3vhe_A 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 336 (359)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH----HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH----HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999999999999999999999999999 9888765422111 11111112223344556788999999999999
Q ss_pred CCCCCCHHHHHHHhchhhcc
Q 011349 294 PRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 294 p~~Rps~~~il~~l~~~~~~ 313 (488)
|.+|||+.+++++|+.+...
T Consensus 337 P~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 337 PSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred hhhCCCHHHHHHHHHHHHHH
Confidence 99999999999999988654
No 70
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.3e-46 Score=365.33 Aligned_cols=246 Identities=16% Similarity=0.159 Sum_probs=209.9
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+++.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 45778899999999999999995 468999999986432 23456789999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-C
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-K 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 207 (488)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 120 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 999999999999973 356999999999999999999999999 999999999999999999999999999876543 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||++|..||.......... .+... ...++...+.++.+++.
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~ 270 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE----KIVSG--KVRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTCCHHHHHHHH
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHH----HHHcC--CCCCCCCCCHHHHHHHH
Confidence 5689999999999999999999999999999999999999887543222111 11111 12344556788999999
Q ss_pred HhccCCCCCCCC-----HHHHHHHh
Q 011349 288 RCLQYEPRERPN-----AKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps-----~~~il~~l 307 (488)
+||+.||.+||+ +.++++|-
T Consensus 271 ~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 271 NLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HHhhcCHHhccCCccCCHHHHHhCc
Confidence 999999999998 89998874
No 71
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=358.85 Aligned_cols=259 Identities=14% Similarity=0.134 Sum_probs=207.8
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCC--eeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE--ERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 130 (488)
.|.+++.||+|+||.||+|... +++.||||+++... ....+.+.+|+.++++++||||+++++++.... ..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 5788899999999999999954 58999999997543 233567889999999999999999999987655 7899999
Q ss_pred cCCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee----cCCCCCeeccCCCcccCCC
Q 011349 131 FMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~~~ 205 (488)
|+++++|.+++.... ...+++.+++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 999999999997432 234999999999999999999999999 9999999999999 7788899999999987654
Q ss_pred CC---ccccccCCCCccccc--------cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc--------
Q 011349 206 GK---SYSTNLAFTPPEYLR--------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM-------- 266 (488)
Q Consensus 206 ~~---~~~~t~~y~aPE~~~--------~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-------- 266 (488)
.. ...||+.|+|||++. +..++.++|||||||++|||+||+.||...............++
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (319)
T 4euu_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI 248 (319)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCC
T ss_pred CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccc
Confidence 33 456899999999986 46789999999999999999999988753211100000000000
Q ss_pred ---------------ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 267 ---------------DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 267 ---------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
........+...+..+.+++.+||+.||++|||+.+++++........
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~ 311 (319)
T 4euu_A 249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRG 311 (319)
T ss_dssp EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC--
T ss_pred hhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcC
Confidence 001112345677889999999999999999999999999987655443
No 72
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.5e-46 Score=350.34 Aligned_cols=253 Identities=22% Similarity=0.293 Sum_probs=213.6
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+.+.+++.||+|+||.||+|...+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 35678889999999999999998888899999998655 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----C
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----K 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 207 (488)
++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 86 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 86 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99999999965 3456999999999999999999999999 999999999999999999999999999865432 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..|+.......... .+........+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~l~~li 238 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-----DISTGFRLYKPRLASTHVYQIM 238 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HHHTTCCCCCCTTSCHHHHHHH
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHH-----HHhcCCcCCCCccCcHHHHHHH
Confidence 3456778999999998889999999999999999999 787775542221111 1111112223445578899999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+||+.||.+|||+.+++++|+.+...
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 239 NHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999988764
No 73
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.2e-46 Score=352.07 Aligned_cols=255 Identities=20% Similarity=0.287 Sum_probs=211.1
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
.++.+.+++.||+|+||.||+|.+ +++.||||+++...... .+.+.+|+.++++++||||+++++++.+. ...++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 355778899999999999999998 48889999998654322 45799999999999999999999999877 77899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ +++||||||+||+++.++.++|+|||++.... .
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-~ 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-S 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-C
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec-c
Confidence 999999999999998644456999999999999999999999974 49999999999999999999999888765433 3
Q ss_pred CccccccCCCCccccccCCccc---CCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIP---ESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~---~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....+|+.|+|||.+.+...+. ++|||||||++|||+||+.||.......... ...........+...++.+.
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 241 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM----KVALEGLRPTIPPGISPHVS 241 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH----HHHHSCCCCCCCTTCCHHHH
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH----HHHhcCCCCCCCCCCCHHHH
Confidence 3457899999999998765544 7999999999999999999886543222111 11112223344556678999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
+++.+||+.||.+|||+.++++.|+.+..
T Consensus 242 ~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 242 KLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 99999999999999999999999998764
No 74
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.7e-46 Score=365.66 Aligned_cols=246 Identities=18% Similarity=0.238 Sum_probs=206.6
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
..+.+.+++.||+|+||.||+|.. .+|+.||||+++... ....+.+..|..++..+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 345678899999999999999995 468999999997532 23456788999999987 8999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD- 205 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 205 (488)
+||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999999973 456999999999999999999999999 99999999999999999999999999986432
Q ss_pred ---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 206 ---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 206 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|..||........... +.. ....++...++++
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~----i~~--~~~~~p~~~s~~~ 245 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS----IRM--DNPFYPRWLEKEA 245 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHH--CCCCCCTTSCHHH
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHH----HHh--CCCCCCcccCHHH
Confidence 2356789999999999999999999999999999999999999876433221111 110 1123444567889
Q ss_pred HHHHHHhccCCCCCCCCHH-HHHHH
Q 011349 283 VRLASRCLQYEPRERPNAK-SLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~-~il~~ 306 (488)
.+++.+||..||.+||++. ++++|
T Consensus 246 ~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 246 KDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHHHHhcCCHhHcCCChHHHHcC
Confidence 9999999999999999997 77665
No 75
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.8e-46 Score=355.21 Aligned_cols=253 Identities=21% Similarity=0.326 Sum_probs=215.2
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..+.+.+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 45678889999999999999954 48889999997654 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
+|++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 9999999998656677999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+|+.|+|||.+.+..++.++||||||+++|+|++ |..|+....... ....+........+..+++.+.+++
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li 245 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYELLEKDYRMERPEGCPEKVYELM 245 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----HHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhccCCCCCCCCCCHHHHHHH
Confidence 2345778999999998899999999999999999999 887776532221 1122222223344556678999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+||..||.+|||+.++++.|+.+...
T Consensus 246 ~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 246 RACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999887664
No 76
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.2e-46 Score=359.49 Aligned_cols=254 Identities=20% Similarity=0.281 Sum_probs=211.1
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+.+.+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 3567888999999999999985 2357899999976542 22457899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCce
Q 011349 127 LVAEFMPNETLSKHLFHWEN----------------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Ni 184 (488)
+||||+++++|.+++..... ..+++.+++.++.||+.||.|||+++ |+||||||+||
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NI 181 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNI 181 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheE
Confidence 99999999999999975322 34899999999999999999999999 99999999999
Q ss_pred eecCCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhh
Q 011349 185 LFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLI 257 (488)
Q Consensus 185 ll~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~ 257 (488)
+++.++.+||+|||+++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..|+.......
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~- 260 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER- 260 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-
Confidence 99999999999999998654332 3345788999999998889999999999999999999 888876542221
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
....+........+...++.+.+++.+||+.||.+|||+.+++++|+.+..+
T Consensus 261 ----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 261 ----LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp ----HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ----HHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 1111222222334556678999999999999999999999999999987654
No 77
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.3e-45 Score=363.97 Aligned_cols=248 Identities=19% Similarity=0.205 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~ 109 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 468889999999999999995 46899999999765432 235788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeeccCCCcccCCCCC-
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~~- 207 (488)
++||+|.+.+. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+|||++.......
T Consensus 110 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 110 VTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 99999999886 4567999999999999999999999999 9999999999999764 459999999998765432
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
...||+.|+|||++.+..++.++|||||||++|+|++|.+||.................. .........++++.+|
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~l 264 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKSL 264 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTGGGGSCHHHHHH
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHH
Confidence 457899999999999889999999999999999999999998654322211110000000 0011112456889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+||..||.+|||+.++++|-
T Consensus 265 i~~~L~~dP~~R~t~~e~l~hp 286 (362)
T 2bdw_A 265 IDSMLTVNPKKRITADQALKVP 286 (362)
T ss_dssp HHHHSCSSGGGSCCHHHHTTSH
T ss_pred HHHHcCCChhhCcCHHHHhcCc
Confidence 9999999999999999999873
No 78
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3e-45 Score=350.10 Aligned_cols=252 Identities=21% Similarity=0.353 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCCh-------HHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDS-------RQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
..+.+.+.||+|+||.||+|.. .+++.||||++........ +.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 4568889999999999999995 5789999999976543221 67899999999999999999999986554
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-cccccccCCceeecCCCC-----CeeccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGR-ALYHDLNTYRILFDQDGN-----PRLSCFGL 199 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-iiH~Dlkp~Nill~~~~~-----~kl~Dfgl 199 (488)
++||||+++++|.+.+.. ....+++..++.++.|++.||.|||+.++ ++||||||+|||++.++. +||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 799999999999988864 44579999999999999999999999864 999999999999987776 99999999
Q ss_pred cccCCCC-CccccccCCCCccccc--cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 200 MKNSRDG-KSYSTNLAFTPPEYLR--TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 200 a~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
++..... ....+|+.|+|||.+. ...++.++|||||||++|||++|+.||.......... .............+.
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~ 253 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTIPE 253 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCCCT
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCCCc
Confidence 9865443 2457899999999984 4567889999999999999999999886532211100 111112223334556
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.+++.+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 254 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 6778999999999999999999999999998764
No 79
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-46 Score=368.62 Aligned_cols=249 Identities=19% Similarity=0.157 Sum_probs=207.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..|.+++.||+|+||.||+|.. .+|+.||+|++..........+.+|+.+|+.++||||+++++++.+....++||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 4578899999999999999995 468999999998665444567999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec--CCCCCeeccCCCcccCCCCC---
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~--- 207 (488)
+||+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++......
T Consensus 131 ~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 208 (387)
T 1kob_A 131 SGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208 (387)
T ss_dssp CCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred CCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence 99999999864 3346999999999999999999999999 99999999999997 45789999999998765443
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||+||..||.............. .............++++.+|+.
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~li~ 286 (387)
T 1kob_A 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR--CDWEFDEDAFSSVSPEAKDFIK 286 (387)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH--CCCCCCSSTTTTSCHHHHHHHH
T ss_pred eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCccccccCCHHHHHHHH
Confidence 34689999999999998999999999999999999999998875432211110000 0001111222345788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..||.+|||+.++++|
T Consensus 287 ~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 287 NLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTSCSSGGGSCCHHHHHTS
T ss_pred HHcCCChhHCcCHHHHhhC
Confidence 9999999999999999987
No 80
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5e-46 Score=362.31 Aligned_cols=251 Identities=16% Similarity=0.258 Sum_probs=203.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCc----EEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDR----WIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+++.||+|+||.||+|.+ .+++ .||+|.+.... ....+.+.+|+.++++++||||+++++++..+ ..++|
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v 94 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI 94 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEE
Confidence 467888999999999999994 3444 36888886543 23456899999999999999999999999765 47899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
+||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 95 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp EECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred EEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999999999975 3467999999999999999999999999 9999999999999999999999999997654322
Q ss_pred -----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||....... ....+........+..++..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 247 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTID 247 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHHHHTTCCCCCCTTBCHH
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-----HHHHHHcCCCCCCCccCCHH
Confidence 2345778999999999999999999999999999999 888876532221 12222222233445567788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 248 ~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999988764
No 81
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-46 Score=364.19 Aligned_cols=256 Identities=21% Similarity=0.283 Sum_probs=208.0
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
..+.+++.||+|+||.||+|.. .++..||||+++... ....+.+.+|+.++.++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 4568889999999999999995 245679999997543 23356799999999999 899999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCce
Q 011349 126 LLVAEFMPNETLSKHLFHWEN---------------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Ni 184 (488)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+||
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NI 203 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 203 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhE
Confidence 999999999999999975322 24899999999999999999999999 99999999999
Q ss_pred eecCCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhh
Q 011349 185 LFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLI 257 (488)
Q Consensus 185 ll~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~ 257 (488)
|++.++.+||+|||++....... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..||.......
T Consensus 204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~- 282 (344)
T 1rjb_A 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA- 282 (344)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH-
Confidence 99999999999999998654332 3345788999999998899999999999999999998 888876542111
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.....+........+...++++.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 283 ---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 283 ---NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp ---HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ---HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 111112222233345556789999999999999999999999999999887654
No 82
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.5e-46 Score=373.56 Aligned_cols=255 Identities=20% Similarity=0.157 Sum_probs=208.3
Q ss_pred HHHhcCCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecC
Q 011349 47 RAATSGFCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG 122 (488)
Q Consensus 47 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 122 (488)
....-....+.+++.||+|+||.||+|... +++.||||+++... ....+.+.+|+.++..++|||||++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 333444567789999999999999999954 68899999986421 12345688999999999999999999999999
Q ss_pred CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
+..|+||||++||+|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++.
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 999999999999999999853 46999999999999999999999999 99999999999999999999999999987
Q ss_pred CCCC-----CccccccCCCCccccccCC----cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC
Q 011349 203 SRDG-----KSYSTNLAFTPPEYLRTGR----VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 203 ~~~~-----~~~~~t~~y~aPE~~~~~~----~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
.... ....||+.|+|||++.+.. ++.++|||||||++|||+||+.||................. ....+
T Consensus 218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~p 295 (410)
T 3v8s_A 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN--SLTFP 295 (410)
T ss_dssp CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH--HCCCC
T ss_pred eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccc--cccCC
Confidence 6543 2567999999999998755 88999999999999999999999876533221111111000 01111
Q ss_pred CChhhHHHHHHHHHHhccCCCCC--CCCHHHHHHHh
Q 011349 274 FSNDDGTELVRLASRCLQYEPRE--RPNAKSLVASL 307 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~l 307 (488)
.....++++.+||.+||..+|.+ ||++++|++|-
T Consensus 296 ~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 296 DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 12245688999999999999988 99999999984
No 83
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1e-45 Score=353.56 Aligned_cols=250 Identities=18% Similarity=0.219 Sum_probs=201.1
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||+|+||.||+|...+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46788999999999999999987899999999975432 2246788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 82 LD-QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp CS-EEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 97 599988864 3467999999999999999999999999 999999999999999999999999998765322 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------ccc-----ccccc-
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FLM-----LMDSC- 269 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~~-----~~~~~- 269 (488)
...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||............ +.. ..++.
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 4467999999999976 45899999999999999999999988654221110000 000 00000
Q ss_pred ------cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 270 ------LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 270 ------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.........++++.+|+.+||+.||++|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0001123456889999999999999999999999986
No 84
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.8e-46 Score=363.96 Aligned_cols=246 Identities=20% Similarity=0.213 Sum_probs=205.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.+++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 56788899999999999994 679999999997654332 34688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 211 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 211 (488)
+. |+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.........|
T Consensus 136 ~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g 212 (348)
T 1u5q_A 136 CL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 212 (348)
T ss_dssp CS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred CC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence 97 688887753 3467999999999999999999999999 99999999999999999999999999998877777889
Q ss_pred ccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 212 NLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 212 t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
|+.|+|||++. +..++.++|||||||++|||+||+.||......... ..+.........+...+..+.+++.+
T Consensus 213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (348)
T 1u5q_A 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNESPALQSGHWSEYFRNFVDS 288 (348)
T ss_dssp CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSCCCCCCCTTSCHHHHHHHHH
T ss_pred CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence 99999999985 467899999999999999999999987654221111 01111111112233456789999999
Q ss_pred hccCCCCCCCCHHHHHHHhc
Q 011349 289 CLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~ 308 (488)
||+.||++|||+.+++++..
T Consensus 289 ~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 289 CLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp HTCSSGGGSCCHHHHTTCHH
T ss_pred HcccChhhCcCHHHHhhChh
Confidence 99999999999999998754
No 85
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.9e-46 Score=358.21 Aligned_cols=256 Identities=21% Similarity=0.320 Sum_probs=212.2
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
+.+.+.+.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.+++++ +||||+++++++..++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 3567889999999999999984 34678999999865432 246799999999999 899999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 126 LLVAEFMPNETLSKHLFHWEN----------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+||+++.+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCC
Confidence 999999999999999975332 25999999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..|+....... ..
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~ 257 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS----KF 257 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH----HH
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh----HH
Confidence 999999999998765432 2345788999999998899999999999999999999 888775532111 11
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...+........+...+..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1111122222334456788999999999999999999999999999887653
No 86
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.8e-46 Score=364.16 Aligned_cols=259 Identities=21% Similarity=0.269 Sum_probs=211.9
Q ss_pred cccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccccccee--cCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC--EGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~l 127 (488)
.+.+++.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++. .....++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 567889999999999999984 358899999998765445567999999999999999999999886 4556899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++++|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 104 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp EEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred EEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 99999999999999642 346999999999999999999999999 9999999999999999999999999998664332
Q ss_pred -------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc----------ccccccccccc
Q 011349 208 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG----------KNFLMLMDSCL 270 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~----------~~~~~~~~~~~ 270 (488)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..|+.......... ......+....
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc
Confidence 3356778999999998889999999999999999999998876543322111 11111222223
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
....+..+++.+.+|+.+||+.||.+|||+.+++++|+.+.....
T Consensus 262 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 262 RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 344556678899999999999999999999999999998876543
No 87
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.2e-46 Score=363.82 Aligned_cols=245 Identities=20% Similarity=0.264 Sum_probs=206.9
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+.+++.||+|+||.||+|... +++.||||+++... ....+.+..|..++..+ +||||+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 456789999999999999999964 58899999997532 23456788999999988 79999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|++||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 9999999999999973 356999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+... ...++...+.++.
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~s~~~~ 249 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ----SIMEH--NVAYPKSMSKEAV 249 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTSCHHHH
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH----HHHhC--CCCCCCCCCHHHH
Confidence 235678999999999999999999999999999999999999987643322111 11111 1234556678999
Q ss_pred HHHHHhccCCCCCCCC-----HHHHHHH
Q 011349 284 RLASRCLQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps-----~~~il~~ 306 (488)
+|+.+||..||.+||+ +.++++|
T Consensus 250 ~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 250 AICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 9999999999999995 5888877
No 88
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-45 Score=361.82 Aligned_cols=249 Identities=16% Similarity=0.236 Sum_probs=204.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
...+.+++.||+|+||.||+|+. .+++.||||+++...... .+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 34578899999999999999995 468899999997654332 34688999999988 89999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999999873 456999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----cccccccccccCCCCChhh
Q 011349 206 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----KNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 206 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 278 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+... ...++...
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~ 242 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSL 242 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTS
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCC
Confidence 235678999999999999999999999999999999999999885421110000 000011111 12345566
Q ss_pred HHHHHHHHHHhccCCCCCCCCH------HHHHHH
Q 011349 279 GTELVRLASRCLQYEPRERPNA------KSLVAS 306 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~------~~il~~ 306 (488)
+.++.+|+.+||..||.+||++ .++++|
T Consensus 243 s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 7889999999999999999995 678776
No 89
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9.4e-46 Score=359.81 Aligned_cols=258 Identities=18% Similarity=0.237 Sum_probs=196.6
Q ss_pred CcccccccCCCCCCceEEEEEeCC-Cc---EEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCee--
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE-DR---WIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER-- 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~---~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 125 (488)
..+.+++.||+|+||.||+|.... +. .||||+++... ....+.+.+|+.++++++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 346788899999999999999543 32 79999997653 23356799999999999999999999999876654
Q ss_pred ----eEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 126 ----LLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 126 ----~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
++||||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeec
Confidence 9999999999999998632 1236999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccccccc
Q 011349 198 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 198 gla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
|+++...... ...+++.|+|||.+.+..++.++|||||||++|||+| |..||......... ..+....
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~-----~~~~~~~ 256 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY-----NYLIGGN 256 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-----HHHHTTC
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH-----HHHhcCC
Confidence 9998654322 3345778999999999999999999999999999999 78777553221111 1111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
....+...+..+.+++.+||+.||.+|||+.++++.|+.+.......
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~ 303 (323)
T 3qup_A 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL 303 (323)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence 22344556788999999999999999999999999999998765433
No 90
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.5e-45 Score=367.72 Aligned_cols=252 Identities=18% Similarity=0.190 Sum_probs=203.1
Q ss_pred CcccccccCCCC--CCceEEEEEeC-CCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEK--APNVVYKGLVD-EDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.|.+++.||+| +||.||+|... +|+.||||+++...... .+.+.+|+.+++.++|||||++++++.+++..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 457889999999 99999999954 69999999997654222 35688899999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
|||+++|+|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 99999999999997655577999999999999999999999999 99999999999999999999999998754321
Q ss_pred --------CCccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc----c----
Q 011349 206 --------GKSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM----D---- 267 (488)
Q Consensus 206 --------~~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~----~---- 267 (488)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||................+ +
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (389)
T 3gni_B 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTI 263 (389)
T ss_dssp ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------
T ss_pred cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccc
Confidence 123467899999999987 5789999999999999999999999865322111100000000 0
Q ss_pred --------------------------------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 --------------------------------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 --------------------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.......+...++.+.+|+.+||+.||.+|||+.++++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 264 PAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000011233456789999999999999999999999988
No 91
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7.9e-46 Score=366.83 Aligned_cols=244 Identities=18% Similarity=0.121 Sum_probs=198.2
Q ss_pred cccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 59 VSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
.+.||+|+||.||+|.. .+|+.||||+++.......+.+.+|+.++++++||||+++++++...+..++||||++|++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56789999999999994 56999999999876545567899999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee--cCCCCCeeccCCCcccCCCC---Cccccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF--DQDGNPRLSCFGLMKNSRDG---KSYSTN 212 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill--~~~~~~kl~Dfgla~~~~~~---~~~~~t 212 (488)
.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..... ....||
T Consensus 174 ~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt 251 (373)
T 2x4f_A 174 FDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGT 251 (373)
T ss_dssp HHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSS
T ss_pred HHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCC
Confidence 998864 3456999999999999999999999999 9999999999999 56788999999999876543 234689
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 292 (488)
+.|+|||++.+..++.++|||||||++|||+||..||.................. .........++++.+|+.+||..
T Consensus 252 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~L~~ 329 (373)
T 2x4f_A 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKEFISKLLIK 329 (373)
T ss_dssp CTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHHHHHTTSCS
T ss_pred CcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHHHHHHHcCC
Confidence 9999999999888999999999999999999999998764322111111100000 00111123567899999999999
Q ss_pred CCCCCCCHHHHHHH
Q 011349 293 EPRERPNAKSLVAS 306 (488)
Q Consensus 293 dp~~Rps~~~il~~ 306 (488)
||.+|||+.++++|
T Consensus 330 dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 330 EKSWRISASEALKH 343 (373)
T ss_dssp SGGGSCCHHHHHHS
T ss_pred ChhhCCCHHHHhcC
Confidence 99999999999986
No 92
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.2e-45 Score=351.93 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=198.5
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
..+.+.+.||+|+||.||+|.... +..||||++...... ..+.+.+|+.++++++||||+++++++ ..+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEE
Confidence 456788999999999999998532 456999998764322 245789999999999999999999987 45678999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 94 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999999964 3456999999999999999999999999 9999999999999999999999999998664432
Q ss_pred ----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
...+|+.|+|||.+.+..++.++|||||||++|||++ |..||........ ...+........+..+++.+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~-----~~~i~~~~~~~~~~~~~~~l 246 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-----IGRIENGERLPMPPNCPPTL 246 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----HHHHHTTCCCCCCTTCCHHH
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH-----HHHHHcCCCCCCCCCCCHHH
Confidence 2345678999999998899999999999999999997 8877764322111 11111112223455677899
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+++.+||+.||++|||+.++++.|+.+...
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987653
No 93
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.1e-45 Score=351.61 Aligned_cols=253 Identities=21% Similarity=0.302 Sum_probs=211.4
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+.+++.||+|+||.||+|...++..||||+++... ...+.+.+|++++++++||||+++++++. .+..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCC
Confidence 4567889999999999999998888899999997654 34678999999999999999999999876 456899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 999999996432336999999999999999999999999 9999999999999999999999999998664432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+++.|+|||.+.+..++.++||||||+++|||+| |..|+......... ..+........+...+..+.+++.
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~ 244 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-----QNLERGYRMVRPDNCPEELYQLMR 244 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH-----HHHhcccCCCCcccccHHHHHHHH
Confidence 345778999999998889999999999999999999 88777654222111 111111222334556788999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+||+.||++|||+.++++.|+.+....
T Consensus 245 ~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 245 LCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999887654
No 94
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-45 Score=358.37 Aligned_cols=254 Identities=20% Similarity=0.281 Sum_probs=204.7
Q ss_pred cccccccCCCCCCceEEEEEeCC-----CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE-----DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+.||+|+||.||+|.... +..||||+++..... ....+.+|+.++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 45667889999999999998532 235999999765422 234689999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 125 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 999999999999964 3467999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...+|+.|+|||.+.+..++.++|||||||++|||+| |+.||......... ..+........+..++.
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 277 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-----KAINDGFRLPTPMDCPS 277 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-----HHHHTTCCCCCCTTCBH
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH-----HHHHCCCcCCCcccCCH
Confidence 2234678999999998899999999999999999999 88887654222111 11111122233455678
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
.+.+++.+||+.||.+||++.++++.|+.+.....
T Consensus 278 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 278 AIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 89999999999999999999999999998876543
No 95
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.7e-45 Score=358.35 Aligned_cols=245 Identities=18% Similarity=0.231 Sum_probs=198.8
Q ss_pred CcccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC----CChHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW----PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
+.|.+++.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.+|+.++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 4568889999999999999996 4789999999976532 2345688999999999999999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999999973 456999999999999999999999999 99999999999999999999999999875432
Q ss_pred C----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 206 G----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 206 ~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
. ....||+.|+|||.+.+..++.++|||||||++|||++|+.||........... +... ...++...+.+
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~ 247 (327)
T 3a62_A 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK----ILKC--KLNLPPYLTQE 247 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHT--CCCCCTTSCHH
T ss_pred CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhC--CCCCCCCCCHH
Confidence 2 345789999999999988899999999999999999999999876432221111 1111 12234456788
Q ss_pred HHHHHHHhccCCCCCCC-----CHHHHHHHh
Q 011349 282 LVRLASRCLQYEPRERP-----NAKSLVASL 307 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rp-----s~~~il~~l 307 (488)
+.+++.+||..||.+|| ++.++++|-
T Consensus 248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp HHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred HHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 99999999999999999 788998873
No 96
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-45 Score=349.23 Aligned_cols=253 Identities=21% Similarity=0.259 Sum_probs=206.4
Q ss_pred cccccCCCCCCceEEEEEe-CCCc---EEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCee-eEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDR---WIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER-LLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~---~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv~e 130 (488)
.+.+.||+|+||.||+|.+ .++. .||||+++.... ...+.+.+|+.++++++||||+++++++.+.+.. ++|||
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 103 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP 103 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence 3447899999999999984 3333 699999976442 2245789999999999999999999999876655 99999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|+.+++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 104 ~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 104 YMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp CCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred cccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 9999999999964 3567899999999999999999999999 99999999999999999999999999975432
Q ss_pred ---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 206 ---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 206 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
.....+|+.|+|||.+.+..++.++|||||||++|+|+||..|+...... ......+........+...+..+
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l 257 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFLAQGRRLPQPEYCPDSL 257 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHHHTTCCCCCCTTCCHHH
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHhhcCCCCCCCccchHHH
Confidence 22345688999999999999999999999999999999977665433111 11111122222233445567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 258 ~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 258 YQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999887654
No 97
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.6e-45 Score=360.62 Aligned_cols=247 Identities=18% Similarity=0.210 Sum_probs=203.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCC-----CCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRS-----AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.|.+++.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 468889999999999999995 56899999998632 122457899999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC---CeeccCCCcccC
Q 011349 129 AEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNS 203 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~ 203 (488)
|||++|++|.+.+... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++..
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999998877542 3446899999999999999999999999 999999999999976554 999999999876
Q ss_pred CCC----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC--CCChh
Q 011349 204 RDG----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSND 277 (488)
Q Consensus 204 ~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 277 (488)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.......... +....... .....
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-----i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG-----IIKGKYKMNPRQWSH 258 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHH-----HHHTCCCCCHHHHTT
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHH-----HHcCCCCCCcccccc
Confidence 543 24568999999999999899999999999999999999999987643221111 11000000 00013
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.+.++.+|+.+||..||++|||+.++++|-
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp 288 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEALNHP 288 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcCh
Confidence 467899999999999999999999999873
No 98
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.9e-45 Score=361.18 Aligned_cols=245 Identities=19% Similarity=0.216 Sum_probs=189.7
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
|.+.+.||+|+||.||+|... +++.||||+++... ..+.+.+|+.++++++||||+++++++...+..++||||++|
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 132 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence 577889999999999999964 58899999997643 346788999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCCCC---Cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG---KS 208 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~---~~ 208 (488)
++|.+++. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++..... ..
T Consensus 133 ~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (349)
T 2w4o_A 133 GELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209 (349)
T ss_dssp CBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCccccccc
Confidence 99999986 4566999999999999999999999999 999999999999975 889999999999865443 34
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|+|||++.+..++.++|||||||++|||++|..||............+... ............+.++.+|+.+
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~ 288 (349)
T 2w4o_A 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-EYYFISPWWDEVSLNAKDLVRK 288 (349)
T ss_dssp ---CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT-CCCCCTTTTTTSCHHHHHHHHT
T ss_pred ccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC-CCccCCchhhhCCHHHHHHHHH
Confidence 568999999999999899999999999999999999999886543221111000000 0001112223457889999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..||++|||+.++++|
T Consensus 289 ~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 289 LIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TSCSSGGGSCCHHHHHHS
T ss_pred HccCChhhCcCHHHHhcC
Confidence 999999999999999987
No 99
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2e-45 Score=353.17 Aligned_cols=257 Identities=15% Similarity=0.131 Sum_probs=209.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.|.+++.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++.+ +|+|++++++++......++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 3568889999999999999994 679999999987543 345688999999999 799999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC-----CeeccCCCcccCCCC
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-----PRLSCFGLMKNSRDG 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfgla~~~~~~ 206 (488)
+ +++|.+++.. .+..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 88 ~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 L-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9 8999999975 3456999999999999999999999999 999999999999987765 999999999865432
Q ss_pred -----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh--hccccccccccccCCC
Q 011349 207 -----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--RGKNFLMLMDSCLEGH 273 (488)
Q Consensus 207 -----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~ 273 (488)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ................
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 244 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH
Confidence 244689999999999998999999999999999999999998865311000 0000000000000011
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
....+++++.+++.+||+.||++|||+.+|++.|+.+.....
T Consensus 245 ~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 245 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 122456789999999999999999999999999999887654
No 100
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.8e-45 Score=367.65 Aligned_cols=248 Identities=15% Similarity=0.118 Sum_probs=193.8
Q ss_pred ccccc-ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec----CCeeeE
Q 011349 55 ADNIV-SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE----GEERLL 127 (488)
Q Consensus 55 ~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~~~~l 127 (488)
.|.++ +.||+|+||.||+|.. .+++.||||+++. ...+.+|+.++.++ +||||+++++++.. ....++
T Consensus 62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 44555 5799999999999995 4689999999963 35678899998555 89999999998865 567899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSR 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~ 204 (488)
||||++||+|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 137 v~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 999999999999997544557999999999999999999999999 999999999999987 7899999999998655
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc--cCCCCChhhH
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC--LEGHFSNDDG 279 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 279 (488)
.. ....||+.|+|||++.+..++.++|||||||++|||++|..||...............+.... ........++
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 295 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSC
T ss_pred CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCC
Confidence 33 345789999999999999999999999999999999999998865421111000000111000 0111113457
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.++.+||.+||..||.+|||+.++++|-.
T Consensus 296 ~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 88999999999999999999999999854
No 101
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.9e-45 Score=350.65 Aligned_cols=254 Identities=20% Similarity=0.269 Sum_probs=195.6
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.+.+.+.||+|+||.||+|.... .||||+++...... .+.+.+|+.++++++||||+++++++ .....++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 356788999999999999998533 49999997654322 35789999999999999999999965 55678999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 101 CEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999999854 3466999999999999999999999999 999999999999999999999999998754321
Q ss_pred -CccccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 -KSYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....||+.|+|||.+. +..++.++|||||||++|+|++|+.||............................+++.+
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHH
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHH
Confidence 2346899999999986 567888999999999999999999988653221110000000000011112334567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus 259 ~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 259 KRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999998764
No 102
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.1e-45 Score=346.99 Aligned_cols=245 Identities=19% Similarity=0.232 Sum_probs=187.1
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.++.|.+++.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 11 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (275)
T 2eue_A 11 HIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp BCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred cccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEE
Confidence 35678999999999999999999 45789999999976532 234578999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+ +++|.+.+. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 91 v~e~~-~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 91 VIEYA-GNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EEECC-CEEHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred Eehhc-CCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 99999 678888876 4567999999999999999999999999 999999999999999999999999999765443
Q ss_pred --CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....||+.|+|||.+.+..+ +.++|||||||++|||++|+.||.............. . ....+...++.+.
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~ 240 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN----G--VYTLPKFLSPGAA 240 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----T--CCCCCTTSCHHHH
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----C--CCCCCccCCHHHH
Confidence 24568999999999987665 7899999999999999999999876533222111110 0 1123445678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||+.||.+|||+.+++++
T Consensus 241 ~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 241 GLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHHhhcCHhHCCCHHHHhhC
Confidence 99999999999999999999886
No 103
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.5e-45 Score=381.75 Aligned_cols=252 Identities=24% Similarity=0.318 Sum_probs=212.5
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.+.||+|+||.||+|.+..+..||||+++... ...+.|.+|+.+|++++||||+++++++.+ +..+|||||+++
T Consensus 268 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~ 345 (535)
T 2h8h_A 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 345 (535)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred hhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcC
Confidence 456788899999999999998888889999998655 346789999999999999999999999865 678999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Ccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KSY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~~ 209 (488)
|+|.+++.......+++.+++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 346 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 424 (535)
T 2h8h_A 346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424 (535)
T ss_dssp EEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCST
T ss_pred CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCC
Confidence 99999997533456999999999999999999999999 999999999999999999999999999876432 233
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||.+.+..++.++|||||||++|||+| |+.||........ ...+....+...+..++..+.+||.+
T Consensus 425 ~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~l~~li~~ 499 (535)
T 2h8h_A 425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQVERGYRMPCPPECPESLHDLMCQ 499 (535)
T ss_dssp TSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 45788999999998899999999999999999999 8887765422211 11111222333455677899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhccc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
||+.||++|||+.+|++.|+.+....
T Consensus 500 cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 500 CWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 99999999999999999999887654
No 104
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=8e-46 Score=376.16 Aligned_cols=245 Identities=20% Similarity=0.246 Sum_probs=199.3
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCC---CCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRS---AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+++.||+|+||.||+|. ..+|+.||||+++.. .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 3467889999999999999999 456899999999753 223345688999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999999863 4579999999999999999999998 88 99999999999999999999999999986432
Q ss_pred --CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.............. . ...++...++++.
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~----~--~~~~p~~~~~~~~ 377 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM----E--EIRFPRTLGPEAK 377 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----C--CCCCCTTSCHHHH
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh----C--CCCCCccCCHHHH
Confidence 2356789999999999999999999999999999999999999866533222111111 1 1224455678899
Q ss_pred HHHHHhccCCCCCCC-----CHHHHHHH
Q 011349 284 RLASRCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rp-----s~~~il~~ 306 (488)
+|+.+||+.||.+|| ++.++++|
T Consensus 378 ~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 999999999999999 99999987
No 105
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.7e-45 Score=357.25 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=211.3
Q ss_pred cccccCCCCCCceEEEEEeC-----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 128 (488)
.+++.||+|+||.||++.+. +++.||||+++..... ..+.+.+|+.++++++||||+++++++.+. ...++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 78899999999999988642 6888999999865422 245789999999999999999999999874 578999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++++|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 114 ~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 189 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189 (318)
T ss_dssp ECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred EecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence 999999999999953 45999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh----------hccccccccccccC
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI----------RGKNFLMLMDSCLE 271 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~----------~~~~~~~~~~~~~~ 271 (488)
...+|+.|+|||.+.+..++.++|||||||++|+|+||..|+........ ........+.....
T Consensus 190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (318)
T 3lxp_A 190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 269 (318)
T ss_dssp EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC
T ss_pred ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC
Confidence 33567889999999988999999999999999999999988754322111 01111222223333
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
...+..++..+.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 270 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 44556678899999999999999999999999999999877643
No 106
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-45 Score=359.63 Aligned_cols=247 Identities=19% Similarity=0.273 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCC--CCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRS--ERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.+++.||+|+||.||+|...+++.||||++....... .+.+.+|+.+|.+++| |||+++++++..+...++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 3578899999999999999998889999999997654322 3578999999999976 99999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
|+ .+++|.+++.. ...+++.++..++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 57899999974 567999999999999999999999999 99999999999997 678999999999866432
Q ss_pred ---CccccccCCCCcccccc-----------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC
Q 011349 207 ---KSYSTNLAFTPPEYLRT-----------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~-----------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ......++.....
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~ 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEI 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTTSCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH---HHHHHHhcCCccc
Confidence 24568999999999865 678889999999999999999999886432111 1112222333333
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.++...+..+.+|+.+||+.||.+|||+.++++|..
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 455555678999999999999999999999999853
No 107
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.9e-45 Score=358.07 Aligned_cols=256 Identities=20% Similarity=0.307 Sum_probs=210.7
Q ss_pred CcccccccCCCCCCceEEEEEe--------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV--------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 123 (488)
+.+.+++.||+|+||.||+|.. .++..||||+++..... ..+.+.+|+.+++++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 4568889999999999999985 34678999999865422 245789999999999 8999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.+
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 193 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCC
Confidence 9999999999999999997432 124899999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|||+| |..|+.........
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---- 269 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---- 269 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH----
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH----
Confidence 999999999998654422 3345788999999988889999999999999999999 88887654322211
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..+........+..++..+.+++.+||+.||.+|||+.+++++|+.+.....
T Consensus 270 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 270 -KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp -HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -HHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 1111112223445567889999999999999999999999999999877543
No 108
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.1e-45 Score=355.16 Aligned_cols=251 Identities=22% Similarity=0.274 Sum_probs=190.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.|.+++.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 4568889999999999999994 5689999999976542 2346789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 132 MPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
++ ++|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 98 6999988642 2246999999999999999999999999 999999999999999999999999999865422
Q ss_pred ---CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-------cccc---------
Q 011349 207 ---KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------LMLM--------- 266 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-------~~~~--------- 266 (488)
....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||............. ...+
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 2pmi_A 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242 (317)
T ss_dssp CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhc
Confidence 34578999999999976 468999999999999999999999987543221100000 0000
Q ss_pred cc------------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DS------------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ..........+.++.+|+.+||+.||++|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 00001112345789999999999999999999999987
No 109
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.5e-45 Score=350.64 Aligned_cols=252 Identities=22% Similarity=0.320 Sum_probs=203.8
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC-CeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG-EERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~ 131 (488)
+..+.+++.||+|+||.||+|.. +|+.||||+++... ..+.+.+|+.++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 45678899999999999999987 58889999997543 457899999999999999999999987654 478999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Cccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 210 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 210 (488)
+++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 175 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence 99999999997433334899999999999999999999999 999999999999999999999999998765443 2345
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+++.|+|||.+.+..++.++||||||+++|||+| |..|+........ ...+........+...++.+.+++.+|
T Consensus 176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~~ 250 (278)
T 1byg_A 176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPRVEKGYKMDAPDGCPPAVYEVMKNC 250 (278)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH-----HHHHTTTCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHhcCCCCCCcccCCHHHHHHHHHH
Confidence 6889999999998899999999999999999998 8887765322111 111111222334556678999999999
Q ss_pred ccCCCCCCCCHHHHHHHhchhhcc
Q 011349 290 LQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
|+.||.+|||+.++++.|+.+...
T Consensus 251 l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 251 WHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcCChhhCCCHHHHHHHHHHHHhh
Confidence 999999999999999999988764
No 110
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.4e-45 Score=358.04 Aligned_cols=244 Identities=16% Similarity=0.229 Sum_probs=195.6
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCC---------
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGE--------- 123 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------- 123 (488)
.|.+++.||+|+||.||+|... +|+.||||+++..... ..+.+.+|+.+|++++||||+++++++.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 4678899999999999999965 7999999999755432 3567999999999999999999999886543
Q ss_pred ------------------------------------------------eeeEEEecCCCCChhhhhccCCC-CCCCHHHH
Q 011349 124 ------------------------------------------------ERLLVAEFMPNETLSKHLFHWEN-QPMKWAMR 154 (488)
Q Consensus 124 ------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~ 154 (488)
..++||||++|++|.+++..... ...++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 166 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC 166 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence 27999999999999999974322 34567789
Q ss_pred HHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----------------CccccccCCCCc
Q 011349 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----------------KSYSTNLAFTPP 218 (488)
Q Consensus 155 ~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----------------~~~~~t~~y~aP 218 (488)
+.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+||
T Consensus 167 ~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 999999999999999999 999999999999999999999999999865443 234689999999
Q ss_pred cccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC
Q 011349 219 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298 (488)
Q Consensus 219 E~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 298 (488)
|.+.+..++.++|||||||++|||++|..|+........ .. .....+......++.+.+++.+||+.||.+||
T Consensus 246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 318 (332)
T 3qd2_B 246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIIT------DV-RNLKFPLLFTQKYPQEHMMVQDMLSPSPTERP 318 (332)
T ss_dssp HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHH------HH-HTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSC
T ss_pred HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHH------Hh-hccCCCcccccCChhHHHHHHHHccCCCCcCC
Confidence 999999999999999999999999999765322111000 00 00000111123456789999999999999999
Q ss_pred CHHHHHHH
Q 011349 299 NAKSLVAS 306 (488)
Q Consensus 299 s~~~il~~ 306 (488)
|+.+++++
T Consensus 319 s~~~~l~~ 326 (332)
T 3qd2_B 319 EATDIIEN 326 (332)
T ss_dssp CHHHHHHS
T ss_pred CHHHHhhc
Confidence 99999986
No 111
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-45 Score=355.09 Aligned_cols=240 Identities=21% Similarity=0.202 Sum_probs=195.8
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC--hHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD--SRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.++++||+|+||+||+|... +|+.||||++....... ...+..|+..+.++ +||||+++++++.+++..++|||
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e 137 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE 137 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence 3578889999999999999964 79999999987544222 23456667666666 89999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---C
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---K 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 207 (488)
|+ +++|.+++.. .+..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 138 ~~-~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 214 (311)
T 3p1a_A 138 LC-GPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214 (311)
T ss_dssp CC-CCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred cc-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence 99 6899998865 3456999999999999999999999999 999999999999999999999999998766443 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchh-hhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL-DLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...||+.|+|||++.+ .++.++|||||||++|||++|..|+..... ..... ......++...++++.+++
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~li 285 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ--------GYLPPEFTAGLSSELRSVL 285 (311)
T ss_dssp CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTT--------TCCCHHHHTTSCHHHHHHH
T ss_pred ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhc--------cCCCcccccCCCHHHHHHH
Confidence 4468999999999885 789999999999999999999876654321 11111 1111112234567899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||+.||++|||+.+++++
T Consensus 286 ~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 286 VMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHSCSSTTTSCCHHHHHTS
T ss_pred HHHcCCChhhCcCHHHHHhC
Confidence 99999999999999999986
No 112
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.5e-45 Score=350.66 Aligned_cols=251 Identities=18% Similarity=0.185 Sum_probs=200.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-----CChHHHHHHHHHHhhcC---CCCCcccccceecCC-
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-----PDSRQFLEEARAVGLLR---SERLVNLIGCCCEGE- 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~- 123 (488)
+.|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+++.++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 3568899999999999999994 6789999999874321 12356788888888775 999999999997654
Q ss_pred ----eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 124 ----ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 124 ----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
..++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 4899999997 69999997655556999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccc-------cc---
Q 011349 200 MKNSRDGK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM-------LM--- 266 (488)
Q Consensus 200 a~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~--- 266 (488)
++...... ...||+.|+|||++.+..++.++|||||||++|||++|++||............... .+
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccch
Confidence 98665432 457799999999999999999999999999999999999988654322111100000 00
Q ss_pred ----ccccCC-------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 ----DSCLEG-------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ----~~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... ......+..+.+|+.+||+.||.+|||+.++++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000000 0112346789999999999999999999999987
No 113
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.5e-45 Score=364.49 Aligned_cols=259 Identities=14% Similarity=0.132 Sum_probs=204.6
Q ss_pred CcccccccCCCCCCceEEEEEeCC------CcEEEEEEccCCCCCC-----------hHHHHHHHHHHhhcCCCCCcccc
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE------DRWIAVKRFNRSAWPD-----------SRQFLEEARAVGLLRSERLVNLI 116 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~~~ 116 (488)
..|.+++.||+|+||.||+|.+.. ++.||||++....... ...+..|+..++.++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 357889999999999999998654 4789999987654111 11234556667777899999999
Q ss_pred cceecC----CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec--CCC
Q 011349 117 GCCCEG----EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDG 190 (488)
Q Consensus 117 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~--~~~ 190 (488)
+++... ...++||||+ |++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++ .++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCC
Confidence 998764 4589999999 9999999975 3467999999999999999999999999 99999999999999 889
Q ss_pred CCeeccCCCcccCCCC-----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-
Q 011349 191 NPRLSCFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR- 258 (488)
Q Consensus 191 ~~kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~- 258 (488)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999754321 2345899999999999989999999999999999999999998753211100
Q ss_pred -------ccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCCC
Q 011349 259 -------GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPS 318 (488)
Q Consensus 259 -------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~~ 318 (488)
......+++..+. ....+.++.+++.+||..+|.+||++.+|++.|+.+........
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~ 335 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKD 335 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 0111122222221 12346789999999999999999999999999999887655443
No 114
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.3e-45 Score=350.13 Aligned_cols=245 Identities=19% Similarity=0.277 Sum_probs=205.8
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec-------------
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE------------- 121 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------- 121 (488)
+.+++.||+|+||.||+|... +++.||||+++... +.+.+|++++++++||||+++++++..
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 88 (284)
T 2a19_B 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSS 88 (284)
T ss_dssp EEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------
T ss_pred cceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccc
Confidence 577888999999999999964 79999999997543 567899999999999999999998854
Q ss_pred ---CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCC
Q 011349 122 ---GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198 (488)
Q Consensus 122 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 198 (488)
....++||||+++++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg 167 (284)
T 2a19_B 89 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDFG 167 (284)
T ss_dssp CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCT
T ss_pred ccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcch
Confidence 345899999999999999997555567999999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 199 LMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 199 la~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
++...... ....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+..... .. ..+ .....+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~-----~~~----~~~~~~ 237 (284)
T 2a19_B 168 LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-FF-----TDL----RDGIIS 237 (284)
T ss_dssp TCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-HH-----HHH----HTTCCC
T ss_pred hheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-HH-----HHh----hccccc
Confidence 98876543 345689999999999998999999999999999999999977543211 00 011 111223
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
...+..+.+++.+||+.||.+|||+.+++++|+.+.+...
T Consensus 238 ~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 238 DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 3456789999999999999999999999999999887644
No 115
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.2e-45 Score=371.14 Aligned_cols=244 Identities=19% Similarity=0.249 Sum_probs=207.0
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.|.+++.||+|+||.||+|... +|+.||||+++... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46788899999999999999954 79999999996432 223467899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~ 172 (476)
T 2y94_A 96 EYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172 (476)
T ss_dssp ECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence 9999999999996 4567999999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......... .+.... ...+...++++.+|
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~----~i~~~~--~~~p~~~s~~~~~L 246 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK----KICDGI--FYTPQYLNPSVISL 246 (476)
T ss_dssp CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH----HHHTTC--CCCCTTCCHHHHHH
T ss_pred cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH----HHhcCC--cCCCccCCHHHHHH
Confidence 35578999999999988765 689999999999999999999987543222111 111111 12334456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||..||.+|||+.++++|
T Consensus 247 i~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHcCCCchhCcCHHHHHhC
Confidence 999999999999999999987
No 116
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-45 Score=357.12 Aligned_cols=252 Identities=16% Similarity=0.259 Sum_probs=203.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcE----EEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRW----IAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
..|.+++.||+|+||.||+|.+ .+++. ||+|.+.... ....+.+.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 4568889999999999999994 44543 5778776443 334678999999999999999999999997654 889
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
|+||+.+|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 94 v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 9999999999999975 3456999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...+|+.|+|||.+.+..++.++|||||||++|||++ |..||....... ....+........+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 246 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTI 246 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHHHHTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHcCCCCCCCccCCH
Confidence 2345778999999999999999999999999999999 888876542221 1222222223344556778
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 899999999999999999999999999988754
No 117
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-45 Score=360.39 Aligned_cols=253 Identities=20% Similarity=0.256 Sum_probs=197.0
Q ss_pred ccccccCCCCCCceEEEEEeC--CC--cEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceec-CCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD--ED--RWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCE-GEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~ 129 (488)
+.+.+.||+|+||.||+|.+. ++ ..||||.++.... ...+.+.+|+.++++++||||+++++++.. .+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 456788999999999999843 22 3589999875432 234679999999999999999999998754 46789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 171 e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 171 PYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp ECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred ECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 99999999999964 4456899999999999999999999999 999999999999999999999999999865332
Q ss_pred -----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhC-CCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....+|+.|+|||.+.+..++.++|||||||++|||+|| .+|+..... ......+........+..++.
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~-----~~~~~~~~~~~~~~~p~~~~~ 323 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQPEYCPD 323 (373)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS-----SCHHHHHHTTCCCCCCTTCCH
T ss_pred cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCH
Confidence 123457789999999999999999999999999999995 444433211 111111111112233445678
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
.+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 324 ~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 324 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999887654
No 118
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-46 Score=360.97 Aligned_cols=252 Identities=16% Similarity=0.222 Sum_probs=188.4
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhh--cCCCCCcccccceecCC----eeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGL--LRSERLVNLIGCCCEGE----ERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~lv 128 (488)
.+.+.+.||+|+||.||+|.. +++.||||+++.. ....+.+|.+++.. ++||||+++++++.... ..++|
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred eeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 457888999999999999986 4888999998753 35678889999888 78999999999998766 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS--------SKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
|||+++|+|.+++. ...+++..++.++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 80 ~e~~~~g~L~~~l~---~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 80 SDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EECCTTCCHHHHHH---HCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC--CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EeccCCCCHHHHHh---ccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC-EeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 99999999999995 346889999999999999999999 888 999999999999999999999999999
Q ss_pred ccCCCCC--------ccccccCCCCccccccC------CcccCCceEeehHHHHHHhhC----------CCCCCcchhhh
Q 011349 201 KNSRDGK--------SYSTNLAFTPPEYLRTG------RVIPESVVYSFGTLLLDLLSG----------KHIPPSHALDL 256 (488)
Q Consensus 201 ~~~~~~~--------~~~~t~~y~aPE~~~~~------~~~~~sDv~slG~il~el~tg----------~~p~~~~~~~~ 256 (488)
+...... ...||+.|+|||++.+. .++.++|||||||++|||+|| ..|+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7654332 23689999999999875 455789999999999999999 44443221111
Q ss_pred hhcccc-ccccccccCCCCCh-----hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 257 IRGKNF-LMLMDSCLEGHFSN-----DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 257 ~~~~~~-~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...... ............+. ..+..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 111111 11112222233332 55678999999999999999999999999999888754
No 119
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.8e-45 Score=352.89 Aligned_cols=254 Identities=20% Similarity=0.296 Sum_probs=206.6
Q ss_pred ccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
+.+++.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+.+++.++||||+++++++... ...++
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 57888999999999999983 368899999997543 23457899999999999999999999999876 56899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 103 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 180 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180 (302)
T ss_dssp EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence 9999999999999954 3456999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh----------hcccccccccccc
Q 011349 208 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI----------RGKNFLMLMDSCL 270 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~----------~~~~~~~~~~~~~ 270 (488)
...+|..|+|||.+.+..++.++|||||||++|+|+||..|+........ ........+....
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (302)
T 4e5w_A 181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260 (302)
T ss_dssp CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTC
T ss_pred cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccC
Confidence 34567889999999998999999999999999999999976533211100 0011111122222
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
....+...++.+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 261 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 261 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 33455567789999999999999999999999999998764
No 120
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.2e-45 Score=371.43 Aligned_cols=252 Identities=18% Similarity=0.134 Sum_probs=205.0
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
...+.+++.||+|+||.||+|... +++.||||+++... ......+.+|+.++..++||||++++++|.+.+..++|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 345688899999999999999954 58889999986421 12234588999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||++||+|.+++.. ....+++..+..++.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++......
T Consensus 153 ~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp ECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred EecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999999999964 2467999999999999999999999999 9999999999999999999999999997654432
Q ss_pred ----ccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 208 ----SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
...||+.|+|||++. +..++.++|||||||++|||+||+.||................ .....+......
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~~~~~~ 309 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK-ERFQFPTQVTDV 309 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH-HHCCCCSSCCCS
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc-ccccCCcccccC
Confidence 357899999999997 4678999999999999999999999987653322211111000 000111112235
Q ss_pred HHHHHHHHHHhccCCCCC--CCCHHHHHHHh
Q 011349 279 GTELVRLASRCLQYEPRE--RPNAKSLVASL 307 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~--Rps~~~il~~l 307 (488)
++++.+||.+||..+|++ ||+++++++|-
T Consensus 310 s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp 340 (437)
T 4aw2_A 310 SENAKDLIRRLICSREHRLGQNGIEDFKKHP 340 (437)
T ss_dssp CHHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred CHHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence 788999999999888888 99999999983
No 121
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-45 Score=349.67 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=211.0
Q ss_pred cccccc-cCCCCCCceEEEEEeC---CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVS-EHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+.+++ .||+|+||.||+|.+. ++..||||+++.... ...+.+.+|+.++++++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 345665 8999999999999853 577899999986542 2345799999999999999999999998 556799999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 89 EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp ECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999999999864 3456999999999999999999999999 9999999999999999999999999998664322
Q ss_pred -----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...+|+.|+|||.+.+..++.++|||||||++|||+| |+.||........ ...+........+..+++.
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~ 241 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-----MAFIEQGKRMECPPECPPE 241 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH-----HHHHHTTCCCCCCTTCCHH
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH-----HHHHhcCCcCCCCCCcCHH
Confidence 2345788999999998889999999999999999999 9988765422211 1111112223445567889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
+.+++.+||..||.+|||+.+++++|+.+..+...+
T Consensus 242 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 242 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999998776543
No 122
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=8.5e-45 Score=348.91 Aligned_cols=256 Identities=20% Similarity=0.254 Sum_probs=204.9
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCccccccee-cCCeeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCC-EGEERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~l 127 (488)
..+.+.+.||+|+||.||+|.... ...||||.++.... ...+.+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356778899999999999998532 23589999876442 22457899999999999999999999864 4567899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999964 4566899999999999999999999999 999999999999999999999999999865432
Q ss_pred -------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 207 -------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 207 -------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+...... ......+........+...+
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 258 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCP 258 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT----TTHHHHHHTTCCCCCCTTCC
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH----HHHHHHHhcCCCCCCCccCC
Confidence 2345678899999999999999999999999999999966554332111 11111111111223344567
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 259 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 259 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 889999999999999999999999999999877543
No 123
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.7e-45 Score=356.04 Aligned_cols=252 Identities=18% Similarity=0.187 Sum_probs=197.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCe----e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEE----R 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~ 125 (488)
..|.+++.||+|+||.||+|.. .+++.||||+++...... ...+.+|+.++++++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 4578889999999999999994 678999999998764333 2468899999999999999999999876543 4
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||++|++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999999973 456999999999999999999999999 99999999999999999999999999976543
Q ss_pred C-------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 206 G-------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 206 ~-------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
. ....||+.|+|||++.+..++.++|||||||++|||+||+.||................... ........
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 246 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP--PSARHEGL 246 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC--HHHHSTTC
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--cccccCCC
Confidence 2 23457999999999999999999999999999999999999987653322211111100000 00011234
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH-hchh
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVAS-LTPL 310 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~-l~~~ 310 (488)
+.++.+++.+||+.||.+||++.+++.+ +..+
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 6789999999999999999977766654 4444
No 124
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-45 Score=360.71 Aligned_cols=257 Identities=19% Similarity=0.280 Sum_probs=209.8
Q ss_pred CCCcccccccCCCCCCceEEEEEeCC-C-----cEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDE-D-----RWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE 123 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 123 (488)
..+.+.+.+.||+|+||.||+|.... + ..||||++...... ..+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 34567888999999999999999532 3 47999999765422 245789999999999 8999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWE------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGE
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCe
Confidence 9999999999999999986421 346899999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..|+....... ....
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----~~~~ 278 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS----KFYK 278 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH----HHHH
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH----HHHH
Confidence 9999999998653322 3345788999999998899999999999999999999 877775432111 1111
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+........+...+..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1122222233445578899999999999999999999999999887653
No 125
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.1e-44 Score=352.96 Aligned_cols=256 Identities=21% Similarity=0.266 Sum_probs=208.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcE--EEEEEccCCC-CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRW--IAVKRFNRSA-WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+.+++.||+|+||.||+|.. .++.. ||||.++... ....+.+.+|+.+++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 4567888999999999999994 45664 4999987533 23356799999999999 899999999999999999999
Q ss_pred EecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCee
Q 011349 129 AEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 194 (488)
|||+++++|.+++.... ...+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEE
Confidence 99999999999997422 247999999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCC---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccccccc
Q 011349 195 SCFGLMKNSRD---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 195 ~Dfgla~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
+|||+++.... .....+++.|+|||.+.+..++.++|||||||++|||+| |+.||.......... .+....
T Consensus 184 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~-----~~~~~~ 258 (327)
T 1fvr_A 184 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE-----KLPQGY 258 (327)
T ss_dssp CCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HGGGTC
T ss_pred cccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH-----HhhcCC
Confidence 99999875432 223456789999999998889999999999999999998 988876543222111 111112
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
....+...++.+.+++.+||..||.+|||+.+++++|+.+.....
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 233445667889999999999999999999999999999877643
No 126
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=7.2e-45 Score=353.28 Aligned_cols=247 Identities=16% Similarity=0.151 Sum_probs=205.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.|.+++.||+|+||.||+|.. .+|+.||||+++..... ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 357889999999999999995 46899999999765422 25679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNS 203 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 203 (488)
||||++|++|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++ .+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp EECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 999999999999997 4567999999999999999999999999 99999999999999887 7999999999876
Q ss_pred CCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 204 RDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 204 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
... ....||+.|+|||.+.+..++.++|||||||++|+|+||..||................. ..........+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~ 247 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY--DFDEEFFSHTSE 247 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTCCH
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--ccChhhhcccCH
Confidence 543 345689999999999998999999999999999999999998865432221111000000 000001123457
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+++.+||..||.+|||+.++++|
T Consensus 248 ~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 248 LAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 89999999999999999999999986
No 127
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.1e-45 Score=352.01 Aligned_cols=264 Identities=16% Similarity=0.188 Sum_probs=204.6
Q ss_pred cCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+..|.+++.||+|+||.||+|.. .+|+.||||++......+ ...+.+|+.++++++||||+++++++...+..+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence 3455678999999999999999994 578999999997643222 456899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 127 LVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
+||||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999988632 3567999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 205 DG----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 205 ~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
.. ....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||........... ..+.............+.
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 265 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSE 265 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH--HHHHTTCSCCCCTTTSCH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH--HHhhcccCCCCcccccCH
Confidence 32 234678999999999998999999999999999999999998865422111000 000001111111234568
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
++.+++.+||+.||.+|||+.++++.|+.+......+
T Consensus 266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 8999999999999999999999999999998876543
No 128
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-44 Score=350.08 Aligned_cols=261 Identities=17% Similarity=0.205 Sum_probs=203.8
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCC
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGE 123 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 123 (488)
.....+..|.+++.||+|+||.||+|.. .+++.||||++......+ .+.+.+|+.++++++||||+++++++..++
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 2h34_A 28 REGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG 107 (309)
T ss_dssp ------CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred CCCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC
Confidence 4455678889999999999999999995 468899999997654322 357899999999999999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
..++||||++|++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 108 QLYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred eEEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 99999999999999999973 456999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 204 RDG-----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 204 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
... ....+|+.|+|||.+.+..++.++||||||+++|||+||+.||........... ...... .....+...
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~--~~~~~~~~~ 261 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAH-INQAIP--RPSTVRPGI 261 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHH-HHSCCC--CGGGTSTTC
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHH-hccCCC--CccccCCCC
Confidence 432 244678999999999998999999999999999999999998876543321111 110000 011223455
Q ss_pred HHHHHHHHHHhccCCCCCCC-CHHHHHHHhchhhccc
Q 011349 279 GTELVRLASRCLQYEPRERP-NAKSLVASLTPLQKEA 314 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rp-s~~~il~~l~~~~~~~ 314 (488)
+..+.+++.+||+.||++|| +++++++.|+.+....
T Consensus 262 ~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 262 PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 67899999999999999999 9999999998776654
No 129
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.4e-45 Score=361.54 Aligned_cols=240 Identities=20% Similarity=0.210 Sum_probs=193.6
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHH-HhhcCCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARA-VGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+.+++.||+|+||.||+|+. .+++.||||+++.... .....+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 34578899999999999999995 4588999999975432 223456777776 577899999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC---
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR--- 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 204 (488)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999999973 456999999999999999999999999 9999999999999999999999999998632
Q ss_pred -CCCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 205 -DGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 205 -~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
......||+.|+|||++.+..++.++|||||||++|||++|..||.......... .++.. ...++...+..+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~----~i~~~--~~~~~~~~~~~~~ 267 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD----NILNK--PLQLKPNITNSAR 267 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHH----HHHHS--CCCCCSSSCHHHH
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH----HHHhc--ccCCCCCCCHHHH
Confidence 2345678999999999999999999999999999999999999987653322211 11111 1123445678899
Q ss_pred HHHHHhccCCCCCCCCHH
Q 011349 284 RLASRCLQYEPRERPNAK 301 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~ 301 (488)
+|+.+||+.||.+||++.
T Consensus 268 ~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 268 HLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHHHHTCSSGGGSTTTT
T ss_pred HHHHHHcccCHHhCCCCC
Confidence 999999999999999974
No 130
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.6e-45 Score=360.03 Aligned_cols=255 Identities=17% Similarity=0.144 Sum_probs=198.0
Q ss_pred CcccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCC-----------ChHHHHHHHHHHhhcCCCCCcccccc
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWP-----------DSRQFLEEARAVGLLRSERLVNLIGC 118 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~~ 118 (488)
..|.+++.||+|+||.||+|... ++..||||++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 46788999999999999999964 5778999999765422 12346788899999999999999999
Q ss_pred eec----CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC--CC
Q 011349 119 CCE----GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG--NP 192 (488)
Q Consensus 119 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~--~~ 192 (488)
+.. ....++||||+ |++|.+++.. ...+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcE
Confidence 987 67899999999 9999999974 347999999999999999999999999 99999999999998877 99
Q ss_pred eeccCCCcccCCCC-----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-
Q 011349 193 RLSCFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK- 260 (488)
Q Consensus 193 kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~- 260 (488)
||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||...........
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999765321 234689999999999998899999999999999999999998854311111000
Q ss_pred ---ccccccccccCC-CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 261 ---NFLMLMDSCLEG-HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 261 ---~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.....+...... ......+.++.+++.+||..||++|||+.+|++.|+.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 000001100000 0011456789999999999999999999999999987655
No 131
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3e-45 Score=377.32 Aligned_cols=250 Identities=20% Similarity=0.244 Sum_probs=209.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+.+++.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+|+.++|||||++++++.+.+..++||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 4567888999999999999995 479999999986432 234567889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||++||+|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++......
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~ 342 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCccc
Confidence 9999999999997655556999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...||+.|+|||++.+..++.++|||||||++|||++|..||......... ..+...+. .....++...++++.+|+
T Consensus 343 ~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~-~~i~~~i~-~~~~~~p~~~s~~~~dLI 420 (576)
T 2acx_A 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVK-EVPEEYSERFSPQARSLC 420 (576)
T ss_dssp ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH-HHHHHHHH-HCCCCCCTTSCHHHHHHH
T ss_pred cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH-HHHHHHhh-cccccCCccCCHHHHHHH
Confidence 457899999999999988999999999999999999999998654211000 00011111 112234556678999999
Q ss_pred HHhccCCCCCCC-----CHHHHHHH
Q 011349 287 SRCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rp-----s~~~il~~ 306 (488)
.+||..||.+|| ++.++++|
T Consensus 421 ~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 421 SQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHhccCCHHHcCCCCCCCHHHHHhC
Confidence 999999999999 78999987
No 132
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.9e-45 Score=361.98 Aligned_cols=245 Identities=20% Similarity=0.279 Sum_probs=200.8
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcC--CCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLR--SERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|...+++.||||++...... ..+.+.+|+.+|++++ ||||+++++++...+..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 37889999999999999999777999999999765432 2457899999999996 5999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
+.+++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 137 -~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 137 -CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp -CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred -cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 457999999974 457899999999999999999999999 99999999999996 589999999999876432
Q ss_pred --CccccccCCCCcccccc-----------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC
Q 011349 207 --KSYSTNLAFTPPEYLRT-----------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~-----------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+..+++......
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIE 288 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTTSCCC
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCccccCC
Confidence 24568999999999865 368889999999999999999999886532111 11122222222333
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
++...+.++.+|+.+||..||.+|||+.+++++-
T Consensus 289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 4444567899999999999999999999999884
No 133
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7.1e-45 Score=352.62 Aligned_cols=257 Identities=19% Similarity=0.250 Sum_probs=206.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccccccee----cCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC----EGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~lv 128 (488)
..|.+++.||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4578899999999999999995 679999999987655445667999999999999999999999987 34578999
Q ss_pred EecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 129 AEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
|||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 9999999999988642 3567999999999999999999999999 999999999999999999999999998765421
Q ss_pred C-------------ccccccCCCCccccccCC---cccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc
Q 011349 207 K-------------SYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 207 ~-------------~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
. ...||+.|+|||.+.+.. ++.++|||||||++|||++|+.||...... ............
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~ 264 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQNQL 264 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHHCC-
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhhccC
Confidence 1 234589999999997644 688999999999999999999887532111 011111111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
....+...+..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 265 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 265 SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 22233455788999999999999999999999999999887643
No 134
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.5e-45 Score=360.54 Aligned_cols=262 Identities=18% Similarity=0.152 Sum_probs=206.5
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-----CCCC
Q 011349 39 REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-----SERL 112 (488)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~ni 112 (488)
..|++.+.....+ .|.++++||+|+||.||+|.. .+++.||||+++... ...+.+..|+.+++.+. ||||
T Consensus 23 ~~~~~~~g~~~~~---~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 23 VHFSWKKGMLLNN---AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp GSCCCCTTCEETT---TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred eeeeeecceEecC---EEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 3444444333344 458889999999999999995 578899999997432 23456888999999996 9999
Q ss_pred cccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC----
Q 011349 113 VNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---- 188 (488)
Q Consensus 113 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---- 188 (488)
+++++++...+..++||||+ +++|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCC
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEcccccc
Confidence 99999999999999999999 899999998655567999999999999999999999999 999999999999975
Q ss_pred ---------------------CCCCeeccCCCcccCCC-CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCC
Q 011349 189 ---------------------DGNPRLSCFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 246 (488)
Q Consensus 189 ---------------------~~~~kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~ 246 (488)
++.+||+|||+++.... .....||+.|+|||++.+..++.++|||||||++|||+||+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 256 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCC
Confidence 78999999999986544 34567899999999999999999999999999999999999
Q ss_pred CCCCcchhhhhhcc-------------------ccccccc-cccCCCCC--------------------hhhHHHHHHHH
Q 011349 247 HIPPSHALDLIRGK-------------------NFLMLMD-SCLEGHFS--------------------NDDGTELVRLA 286 (488)
Q Consensus 247 ~p~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~~~--------------------~~~~~~l~~li 286 (488)
.||........... .....+. ......++ ...++.+.+|+
T Consensus 257 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 336 (360)
T 3llt_A 257 LLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFL 336 (360)
T ss_dssp CSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHH
Confidence 98865321110000 0000000 00000000 01126788999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||+.||.+|||+.++++|
T Consensus 337 ~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 337 YSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHCCSSGGGSCCHHHHTTS
T ss_pred HHHhcCChhhCCCHHHHhcC
Confidence 99999999999999999876
No 135
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.5e-44 Score=348.20 Aligned_cols=248 Identities=17% Similarity=0.159 Sum_probs=204.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.+++.||+|+||.||+|.. .+|+.||||+++.......+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS 89 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCC
Confidence 467888999999999999995 4789999999987654455679999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCCC--c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDGK--S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~~--~ 208 (488)
+++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||++ +.++.+||+|||+++...... .
T Consensus 90 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (304)
T 2jam_A 90 GGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST 166 (304)
T ss_dssp SCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHH
T ss_pred CccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcccc
Confidence 9999998863 456999999999999999999999999 9999999999999 788999999999997654432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|+|||.+.+..++.++|||||||++|+|++|..||................. ..........+..+.+++.+
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~ 244 (304)
T 2jam_A 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY--EFESPFWDDISESAKDFICH 244 (304)
T ss_dssp HHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC--CCCTTTTTTSCHHHHHHHHH
T ss_pred ccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCccccccCCHHHHHHHHH
Confidence 4589999999999998999999999999999999999998865432221111000000 01122334567889999999
Q ss_pred hccCCCCCCCCHHHHHHHh
Q 011349 289 CLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l 307 (488)
||..||.+|||+.+++++-
T Consensus 245 ~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 245 LLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp HHCSSTTTSCCHHHHHTSH
T ss_pred HcCCChhHCcCHHHHhcCc
Confidence 9999999999999999873
No 136
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=353.31 Aligned_cols=252 Identities=18% Similarity=0.192 Sum_probs=208.8
Q ss_pred cCHHHHHHHhcCC-CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--------ChHHHHHHHHHHhhcCCC
Q 011349 41 FNLDQLRAATSGF-CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--------DSRQFLEEARAVGLLRSE 110 (488)
Q Consensus 41 ~~~~~~~~~~~~~-~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~ 110 (488)
++++.+....+.| ..|.+++.||+|+||.||+|. ..+++.||||+++..... ....+.+|+.++++++||
T Consensus 10 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 89 (335)
T 3dls_A 10 VELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89 (335)
T ss_dssp EECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCT
T ss_pred ccccccccCCcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCC
Confidence 3444444444333 356888999999999999999 457899999999865422 234678899999999999
Q ss_pred CCcccccceecCCeeeEEEecCCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 111 RLVNLIGCCCEGEERLLVAEFMPNE-TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 111 niv~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
||+++++++.+.+..++||||+.+| +|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 90 ~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~ 166 (335)
T 3dls_A 90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAED 166 (335)
T ss_dssp TBCCEEEEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred CEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCC
Confidence 9999999999999999999998766 9999987 4557999999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC---ccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccc
Q 011349 190 GNPRLSCFGLMKNSRDGK---SYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML 265 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~---~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 265 (488)
+.+||+|||+++...... ...||+.|+|||++.+..+ +.++|||||||++|+|++|..||..... .
T Consensus 167 ~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------~ 236 (335)
T 3dls_A 167 FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------T 236 (335)
T ss_dssp SCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------G
T ss_pred CcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------H
Confidence 999999999998765433 4568999999999988776 7899999999999999999998864311 1
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.... ...+...++++.+|+.+||+.||.+|||+.+++++-
T Consensus 237 ~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 237 VEAA--IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp TTTC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred Hhhc--cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1111 112233567899999999999999999999999983
No 137
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-44 Score=353.60 Aligned_cols=253 Identities=17% Similarity=0.228 Sum_probs=199.3
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc--CCCCCcccccceecC----CeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL--RSERLVNLIGCCCEG----EERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~----~~~~lv 128 (488)
.+.+++.||+|+||.||+|... ++.||||++... ....+.+|.+++..+ +||||+++++++... ...++|
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred ceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 4588899999999999999874 889999998643 234566666666655 899999999999876 679999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccCCceeecCCCCCeeccCCCc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------GRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
|||+++|+|.+++.. ..+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 114 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 114 TDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCc
Confidence 999999999999953 4699999999999999999999998 8 999999999999999999999999999
Q ss_pred ccCCCCC--------ccccccCCCCccccccCCcccC------CceEeehHHHHHHhhC----------CCCCCcchhhh
Q 011349 201 KNSRDGK--------SYSTNLAFTPPEYLRTGRVIPE------SVVYSFGTLLLDLLSG----------KHIPPSHALDL 256 (488)
Q Consensus 201 ~~~~~~~--------~~~~t~~y~aPE~~~~~~~~~~------sDv~slG~il~el~tg----------~~p~~~~~~~~ 256 (488)
+...... ...||+.|+|||++.+...+.. +|||||||++|||+|| ..|+.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 7654322 3468999999999987666655 9999999999999999 44443221100
Q ss_pred hhcccccc-ccccccCCCCC-----hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 257 IRGKNFLM-LMDSCLEGHFS-----NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 257 ~~~~~~~~-~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
........ ..........+ ..++.++.+|+.+||+.||.+|||+.+++++|+.+.....
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 00000000 00111122222 2577889999999999999999999999999999887643
No 138
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-44 Score=368.17 Aligned_cols=249 Identities=18% Similarity=0.223 Sum_probs=184.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecC-----Cee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 125 (488)
+.|.+++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.+|+.++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 4578999999999999999994 47899999999754322 245789999999999999999999998543 568
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
|+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++....
T Consensus 133 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEeccc-cchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99999984 79999986 4567999999999999999999999999 99999999999999999999999999986532
Q ss_pred C-------------------------------CccccccCCCCcccc-ccCCcccCCceEeehHHHHHHhh---------
Q 011349 206 G-------------------------------KSYSTNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLS--------- 244 (488)
Q Consensus 206 ~-------------------------------~~~~~t~~y~aPE~~-~~~~~~~~sDv~slG~il~el~t--------- 244 (488)
. ....||+.|+|||++ .+..++.++|||||||++|||+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 1 234679999999986 45679999999999999999999
Q ss_pred --CCCCCCcchhhhhh---------------------------cc------------c---cccccccccC---CCCChh
Q 011349 245 --GKHIPPSHALDLIR---------------------------GK------------N---FLMLMDSCLE---GHFSND 277 (488)
Q Consensus 245 --g~~p~~~~~~~~~~---------------------------~~------------~---~~~~~~~~~~---~~~~~~ 277 (488)
|+++|++...-... +. . ....+..... ......
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 55555443210000 00 0 0000000000 001123
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.++++.+|+.+||..||.+|||+.++++|
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 46789999999999999999999999998
No 139
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.4e-45 Score=345.19 Aligned_cols=242 Identities=18% Similarity=0.208 Sum_probs=204.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.+.+.||+|+||.||+|.. .++..||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT 89 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence 467888999999999999995 4577899999987665667889999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCC---C
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG---K 207 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~---~ 207 (488)
+++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||++ +.++.+||+|||++...... .
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 90 GGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp SCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 9999998863 456999999999999999999999999 9999999999999 78899999999999865443 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh----hhHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN----DDGTELV 283 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~ 283 (488)
...+|+.|+|||.+.+ .++.++||||||+++|+|+||..||............ .... ...+. ..++.+.
T Consensus 167 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI----REGT--FTFPEKDWLNVSPQAE 239 (277)
T ss_dssp CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHCC--CCCCHHHHTTSCHHHH
T ss_pred ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH----HhCC--CCCCchhhhcCCHHHH
Confidence 4568999999999875 4899999999999999999999988654322211110 0000 01111 3467899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||+.||.+|||+.++++|
T Consensus 240 ~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 240 SLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999986
No 140
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-44 Score=378.90 Aligned_cols=246 Identities=20% Similarity=0.268 Sum_probs=204.8
Q ss_pred cCCCCCCceEEEEEeC---CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
+||+|+||.||+|.+. ++..||||+++.... ...+.+.+|+.+|++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6899999999999853 466799999986542 346789999999999999999999999875 56999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-------cc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-------SY 209 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~~ 209 (488)
|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 9999964 3456999999999999999999999999 9999999999999999999999999998764322 12
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.+|+.|+|||++.+..++.++|||||||++|||+| |+.||....... ....+....+...+..+++++.+|+.+
T Consensus 500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----~~~~i~~~~~~~~p~~~~~~l~~li~~ 574 (613)
T 2ozo_A 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAFIEQGKRMECPPECPPELYALMSD 574 (613)
T ss_dssp --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-----HHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 34578999999998999999999999999999998 998886542221 111222222334566678999999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhccc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
||+.||++||++.++++.|+.+....
T Consensus 575 cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 575 CWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp TTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999876654
No 141
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-45 Score=354.56 Aligned_cols=257 Identities=19% Similarity=0.307 Sum_probs=210.8
Q ss_pred cccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC--eeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE--ERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 127 (488)
.+.+++.||+|+||.||+|.+ .+++.||||++........+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 121 (326)
T 2w1i_A 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 121 (326)
T ss_dssp GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEE
T ss_pred HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEE
Confidence 467889999999999999984 368899999998765455678999999999999999999999887644 7899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 122 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 122 IMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp EECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred EEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 9999999999999975 3356999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh---cc--------ccccccccc
Q 011349 208 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---GK--------NFLMLMDSC 269 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~---~~--------~~~~~~~~~ 269 (488)
...++..|+|||.+.+..++.++|||||||++|||+||..|+......... .. .+...+...
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence 234567899999999888999999999999999999999776533111110 00 111122222
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.....+..++.++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 280 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 280 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 22334556778999999999999999999999999999988764
No 142
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-45 Score=366.98 Aligned_cols=252 Identities=19% Similarity=0.135 Sum_probs=203.8
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
..+.+.+++.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|..++..++||||+++++++.+.+..|+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 345568889999999999999995 5799999999964321 123458899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||++||+|.+++... +..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++......
T Consensus 139 VmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~ 216 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216 (412)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence 99999999999999642 346999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -----ccccccCCCCccccc-------cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 208 -----SYSTNLAFTPPEYLR-------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~-------~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
...||+.|+|||++. +..++.++|||||||++|||++|+.||............... ......+..+
T Consensus 217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~ 295 (412)
T 2vd5_A 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHY-KEHLSLPLVD 295 (412)
T ss_dssp CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH-HHHCCCC---
T ss_pred ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhc-ccCcCCCccc
Confidence 357899999999997 356899999999999999999999998765332211111100 0000111122
Q ss_pred hhhHHHHHHHHHHhccCCCCCC---CCHHHHHHHh
Q 011349 276 NDDGTELVRLASRCLQYEPRER---PNAKSLVASL 307 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~R---ps~~~il~~l 307 (488)
...++++.+||.+||. +|.+| |+++++++|-
T Consensus 296 ~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hp 329 (412)
T 2vd5_A 296 EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHP 329 (412)
T ss_dssp -CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSG
T ss_pred cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCC
Confidence 3467889999999999 99998 6999999883
No 143
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8e-45 Score=346.10 Aligned_cols=251 Identities=23% Similarity=0.292 Sum_probs=204.4
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+.+.+.||+|+||.||+|.+.. +..||||++..... ...+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence 456788899999999999998432 33599999986532 235679999999999999999999998764 567999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 91 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 91 MELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp EECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred EecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 999999999999964 3456999999999999999999999999 9999999999999999999999999998654432
Q ss_pred ----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
...+|+.|+|||.+.+..++.++||||||+++|||+| |+.||........ ...+........+...++.+
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l 243 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-----IGVLEKGDRLPKPDLCPPVL 243 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH-----HHHHHHTCCCCCCTTCCHHH
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH-----HHHHhcCCCCCCCCCCCHHH
Confidence 3355788999999998899999999999999999998 9988754322111 11111111223344567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+++.+||..||.+|||+.+++++|+.+..
T Consensus 244 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 244 YTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999998765
No 144
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.5e-44 Score=344.72 Aligned_cols=249 Identities=18% Similarity=0.201 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
..|.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 4678899999999999999995 46899999999754422 23578899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC---CeeccCCCcccCCCCC
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNSRDGK 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~~~~ 207 (488)
|+++++|.+.+.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++. +||+|||++.......
T Consensus 86 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 86 LVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred cCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 9999999988863 456999999999999999999999999 999999999999976655 9999999997665433
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...||+.|+|||.+.+..++.++||||||+++|+|++|+.||.................. .........++++.+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (284)
T 3kk8_A 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKS 240 (284)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHH
T ss_pred cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhcccCHHHHH
Confidence 357899999999999999999999999999999999999998664332221111111100 111112345678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+||+.||++|||+.+++++-
T Consensus 241 li~~~l~~dp~~Rps~~~~l~h~ 263 (284)
T 3kk8_A 241 LIDSMLTVNPKKRITADQALKVP 263 (284)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTSH
T ss_pred HHHHHcccChhhCCCHHHHhcCc
Confidence 99999999999999999999973
No 145
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.2e-44 Score=344.26 Aligned_cols=248 Identities=17% Similarity=0.176 Sum_probs=188.2
Q ss_pred cCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+..+.+++.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence 4456778999999999999999995 579999999986432 123467899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999864 3467999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 ----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||......... ...... ....+...+.++
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~ 239 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL----NKVVLA--DYEMPSFLSIEA 239 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSS--CCCCCTTSCHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH----HHHhhc--ccCCccccCHHH
Confidence 2456899999999999888999999999999999999999887653211111 111110 112344567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+||+.||++|||+.+++++
T Consensus 240 ~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 240 KDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHcccCHhhCCCHHHHhcC
Confidence 999999999999999999999986
No 146
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9e-45 Score=351.75 Aligned_cols=247 Identities=18% Similarity=0.166 Sum_probs=197.8
Q ss_pred ccccc-ccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIV-SEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.++ +.||+|+||.||+|. ..+++.||||++..........+.+|+.++.++ +||||+++++++.+.+..++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 35564 578999999999999 457999999999876655677899999999995 799999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC---CeeccCCCcccCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~~~-- 206 (488)
++|++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999999974 456999999999999999999999999 999999999999987776 899999998754321
Q ss_pred ---------CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-----------ccc
Q 011349 207 ---------KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----------GKN 261 (488)
Q Consensus 207 ---------~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-----------~~~ 261 (488)
....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||......... ...
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 13358999999999975 55889999999999999999999988654211000 000
Q ss_pred cccccccccCCCCC----hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 FLMLMDSCLEGHFS----NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+... ...++ ...+..+.+|+.+||+.||.+|||+.++++|
T Consensus 250 ~~~i~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 250 FESIQEG--KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHC--CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhcc--CcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000000 01122 1246789999999999999999999999997
No 147
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.8e-44 Score=349.19 Aligned_cols=255 Identities=19% Similarity=0.237 Sum_probs=199.4
Q ss_pred CcccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCC----
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGE---- 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 123 (488)
+.+.+.+.||+|+||.||+|... ++..||||+++...... .+.+.+|+.++++++||||+++++++....
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 45678888999999999999843 34579999997654322 356899999999999999999999997754
Q ss_pred -eeeEEEecCCCCChhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCC
Q 011349 124 -ERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198 (488)
Q Consensus 124 -~~~lv~e~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 198 (488)
..++||||+++++|.+++.. .....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecC
Confidence 35999999999999998842 13467999999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccC
Q 011349 199 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 199 la~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
+++..... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..|+......... ..+.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~ 267 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY-----DYLLHGHR 267 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-----HHHHTTCC
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-----HHHHcCCC
Confidence 99865432 23355788999999999999999999999999999999 77776543222111 11111112
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...+...++.+.+++.+||..||.+|||+.+++++|+.+....
T Consensus 268 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 268 LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 2344556788999999999999999999999999999987653
No 148
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8.3e-45 Score=346.91 Aligned_cols=243 Identities=16% Similarity=0.181 Sum_probs=203.5
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC--ChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP--DSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|... +++.||||+++..... ....+.+|+..+..+ +||||+++++++.+.+..++|||
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e 91 (289)
T 1x8b_A 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 91 (289)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEE
Confidence 4578889999999999999954 7999999999865432 345788999999999 89999999999999999999999
Q ss_pred cCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-------------------
Q 011349 131 FMPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD------------------- 189 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~------------------- 189 (488)
|++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 92 YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp CCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------C
T ss_pred ecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 999999999996421 266999999999999999999999999 9999999999999844
Q ss_pred CCCeeccCCCcccCCCCCccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc
Q 011349 190 GNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 268 (488)
..+||+|||++..........+|+.|+|||.+.+. .+++++|||||||++|+|++|.+++....... .+. .
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-------~~~-~ 242 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH-------EIR-Q 242 (289)
T ss_dssp CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH-------HHH-T
T ss_pred eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH-------HHH-c
Confidence 47899999999988777777899999999999875 66789999999999999999987654331110 011 1
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......+...++.+.+++.+||+.||++|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 243 GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 11123344567889999999999999999999999987
No 149
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.1e-45 Score=356.73 Aligned_cols=246 Identities=19% Similarity=0.249 Sum_probs=199.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.+++.||+|+||.||+|.. .+++.||||++.... ....+|++++.++ +||||+++++++.+++..++||||+
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~ 98 (342)
T 2qr7_A 23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM 98 (342)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCC
Confidence 468889999999999999995 468899999997654 2345788999888 7999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC----CCCeeccCCCcccCCCC--
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD----GNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfgla~~~~~~-- 206 (488)
+||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||+.++ +.+||+|||+++.....
T Consensus 99 ~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 99 KGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp CSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 9999999987 4567999999999999999999999999 9999999999998433 35999999999865432
Q ss_pred --CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc--ccCCCCChhhHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS--CLEGHFSNDDGTEL 282 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 282 (488)
....+|+.|+|||++.+..++.++|||||||++|||++|..||........ ......+... ..........+.++
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~ 254 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP-EEILARIGSGKFSLSGGYWNSVSDTA 254 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH-HHHHHHHHHCCCCCCSTTTTTSCHHH
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH-HHHHHHHccCCcccCccccccCCHHH
Confidence 245789999999999888899999999999999999999998864211100 0000000000 11112234567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+|+.+||..||++|||+.++++|-.
T Consensus 255 ~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 255 KDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred HHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 99999999999999999999998743
No 150
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.8e-45 Score=354.30 Aligned_cols=240 Identities=20% Similarity=0.254 Sum_probs=181.0
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
+.||+|+||.||+|.. .+++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||++||+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 6789999999999995 46899999999643 3567889999999997 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeeccCCCcccCCCC----Cccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLMKNSRDG----KSYS 210 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla~~~~~~----~~~~ 210 (488)
.+++.. ...+++.++..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 94 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999973 467999999999999999999999999 99999999999997665 7999999999865433 2456
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC--CC----hhhHHHHHH
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FS----NDDGTELVR 284 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~l~~ 284 (488)
+|+.|+|||++.+..++.++|||||||++|+|++|..||........ ............... ++ ...++++.+
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 249 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCCCCCCcccccCCCHHHHH
Confidence 79999999999999999999999999999999999998865422110 000111111111111 11 235688999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
|+.+||..||.+|||+.++++|
T Consensus 250 li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 250 LIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHHCCCChhHCCCHHHHhcC
Confidence 9999999999999999999876
No 151
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.8e-45 Score=346.20 Aligned_cols=246 Identities=20% Similarity=0.245 Sum_probs=204.5
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+..|.+++.||+|+||.||+|.. .++..||||++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 34678889999999999999995 457789999986432 12245789999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 999999999999873 356999999999999999999999999 999999999999999999999999998655432
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..||............. .....++...+..+.+|+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li 238 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------RVEFTFPDFVTEGARDLI 238 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH------HTCCCCCTTSCHHHHHHH
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH------hCCCCCCCcCCHHHHHHH
Confidence 34578999999999999899999999999999999999999886543222111100 011233445678899999
Q ss_pred HHhccCCCCCCCCHHHHHHHh
Q 011349 287 SRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l 307 (488)
.+||+.||.+|||+.++++|-
T Consensus 239 ~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 239 SRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp HHHCCSSGGGSCCHHHHHHCH
T ss_pred HHHhccChhhCCCHHHHhhCc
Confidence 999999999999999999984
No 152
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6e-45 Score=352.87 Aligned_cols=257 Identities=21% Similarity=0.279 Sum_probs=208.8
Q ss_pred CCcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC-
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE- 123 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~- 123 (488)
.+.+.+++.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 34668899999999999999983 34678999999765432 235789999999999 7999999999987654
Q ss_pred eeeEEEecCCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWEN--------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
..++||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+||+++.+
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEK 184 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGG
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCC
Confidence 58999999999999999974321 12899999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..|+........ .
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~----~ 260 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----F 260 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH----H
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH----H
Confidence 999999999998654332 3456789999999999999999999999999999998 8887754321111 1
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...+........+...++.+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1111111122334456788999999999999999999999999999887643
No 153
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=8.7e-45 Score=347.69 Aligned_cols=251 Identities=22% Similarity=0.269 Sum_probs=205.9
Q ss_pred Ccccccc-cCCCCCCceEEEEEe---CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 54 CADNIVS-EHGEKAPNVVYKGLV---DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 54 ~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
..+.+.+ .||+|+||.||+|.+ .+++.||||+++...... .+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 3456676 899999999999963 346889999997654222 46799999999999999999999998 5677899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999974 456999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 208 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
...+|+.|+|||.+.+..++.++||||||+++|+|+| |..||........ ...+........+..++
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 246 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-----TAMLEKGERMGCPAGCP 246 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCTTCC
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCC
Confidence 2234688999999998889999999999999999999 9888765432221 11111122233455677
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999988654
No 154
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=8e-45 Score=353.05 Aligned_cols=252 Identities=20% Similarity=0.313 Sum_probs=207.0
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+.+.||+|+||.||+|... +++.||||++...... ....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 105 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence 4578889999999999999853 4778999999754422 23468999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 128 VAEFMPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~ 184 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 184 (322)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcc
Confidence 999999999999986421 246799999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCC
Q 011349 200 MKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 200 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..|+.......... .+......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~ 259 (322)
T 1p4o_A 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR-----FVMEGGLL 259 (322)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHH-----HHHTTCCC
T ss_pred ccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHH-----HHHcCCcC
Confidence 97653321 2345788999999998899999999999999999999 777765432221111 11111112
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
..+..++..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 260 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 2344567889999999999999999999999999988755
No 155
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.1e-44 Score=372.31 Aligned_cols=251 Identities=16% Similarity=0.206 Sum_probs=207.5
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+++.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+|++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 45667888899999999999995 469999999996432 23356789999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 129 AEFMPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
|||++||+|.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++.....
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~ 342 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence 99999999999986432 456999999999999999999999999 999999999999999999999999999876443
Q ss_pred ----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 ----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....||+.|+|||++.+..++.++|||||||++|||+||..||...............+... ...++...++.+
T Consensus 343 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~ 420 (543)
T 3c4z_A 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPAS 420 (543)
T ss_dssp CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHHH
T ss_pred CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHHH
Confidence 23578999999999999999999999999999999999999986542110000001111111 123455667899
Q ss_pred HHHHHHhccCCCCCCCCH-----HHHHHH
Q 011349 283 VRLASRCLQYEPRERPNA-----KSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~-----~~il~~ 306 (488)
.+|+.+||..||.+||++ .++++|
T Consensus 421 ~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp HHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred HHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 999999999999999965 778776
No 156
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-44 Score=348.68 Aligned_cols=250 Identities=20% Similarity=0.226 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
..|.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 4578899999999999999995 458999999987654322 3568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|+++++|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (311)
T 4agu_A 83 YCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY 159 (311)
T ss_dssp CCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence 999999998876 4566999999999999999999999999 999999999999999999999999999865532
Q ss_pred CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc---c-------------cccccc
Q 011349 207 KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF---L-------------MLMDSC 269 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~---~-------------~~~~~~ 269 (488)
....+|+.|+|||.+.+ ..++.++|||||||++|+|+||..||............. . ......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence 24467899999999976 668999999999999999999999886543221100000 0 000000
Q ss_pred -cC--CCC------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 270 -LE--GHF------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 270 -~~--~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ... ....+..+.+|+.+||+.||.+|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 000 02346779999999999999999999999987
No 157
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.6e-45 Score=362.11 Aligned_cols=248 Identities=21% Similarity=0.288 Sum_probs=189.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcC-CCCCcccccceecCC--eeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGE--ERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~~l 127 (488)
..|.+++.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.++..+. ||||+++++++...+ ..|+
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 3568899999999999999994 5789999999865422 22456889999999997 999999999997543 6899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++ ++|..++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 89 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 999997 689998853 56999999999999999999999999 99999999999999999999999999975432
Q ss_pred -----------------------CCccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc
Q 011349 206 -----------------------GKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261 (488)
Q Consensus 206 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~ 261 (488)
.....||+.|+|||++.+ ..++.++|||||||++|||++|++||++..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i 243 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 123468999999999987 67899999999999999999999998764321110000
Q ss_pred cccc-------c----------------------ccccCC------------CCChhhHHHHHHHHHHhccCCCCCCCCH
Q 011349 262 FLML-------M----------------------DSCLEG------------HFSNDDGTELVRLASRCLQYEPRERPNA 300 (488)
Q Consensus 262 ~~~~-------~----------------------~~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~ 300 (488)
...+ + ...... ......++++.+|+.+||..||.+|||+
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 0000 0 000000 0011345789999999999999999999
Q ss_pred HHHHHH
Q 011349 301 KSLVAS 306 (488)
Q Consensus 301 ~~il~~ 306 (488)
.++++|
T Consensus 324 ~e~l~H 329 (388)
T 3oz6_A 324 NDALKH 329 (388)
T ss_dssp HHHTTS
T ss_pred HHHhCC
Confidence 999998
No 158
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.8e-45 Score=354.60 Aligned_cols=258 Identities=21% Similarity=0.265 Sum_probs=198.6
Q ss_pred cCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHH--HhhcCCCCCccccccee-----cCC
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARA--VGLLRSERLVNLIGCCC-----EGE 123 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~-----~~~ 123 (488)
-+++.+.+++.||+|+||.||+|.. +++.||||++.... ...+..|.++ +..++||||+++++.+. ...
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 3456788999999999999999977 78899999997433 3445555555 45589999999997543 234
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CCcccccccCCceeecCCCCCee
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK---------GRALYHDLNTYRILFDQDGNPRL 194 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------~~iiH~Dlkp~Nill~~~~~~kl 194 (488)
..++||||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEE
T ss_pred eEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEE
Confidence 67899999999999999953 4468999999999999999999999 8 999999999999999999999
Q ss_pred ccCCCcccCCCC------------CccccccCCCCcccccc-------CCcccCCceEeehHHHHHHhhCCCCCCcchh-
Q 011349 195 SCFGLMKNSRDG------------KSYSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL- 254 (488)
Q Consensus 195 ~Dfgla~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~il~el~tg~~p~~~~~~- 254 (488)
+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||..|+.....
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 999999765321 13468999999999986 4567899999999999999999766533211
Q ss_pred hhhhc--------cc----ccc-ccccccCCCC------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 255 DLIRG--------KN----FLM-LMDSCLEGHF------SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 255 ~~~~~--------~~----~~~-~~~~~~~~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..... .. ... .........+ ....++.+.+|+.+||+.||++|||+.++++.|+.+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 00000 00 000 0001111111 22367789999999999999999999999999999887654
Q ss_pred C
Q 011349 316 V 316 (488)
Q Consensus 316 ~ 316 (488)
.
T Consensus 322 ~ 322 (336)
T 3g2f_A 322 R 322 (336)
T ss_dssp C
T ss_pred h
Confidence 3
No 159
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-45 Score=358.69 Aligned_cols=257 Identities=15% Similarity=0.127 Sum_probs=205.1
Q ss_pred CcccccccCCCCCCceEEEEEeCC---------CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcc----------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE---------DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVN---------- 114 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 114 (488)
..|.+++.||+|+||.||+|.... ++.||||++... +.+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 467888999999999999999653 788999998754 46889999999999999988
Q ss_pred -----cccceec-CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 115 -----LIGCCCE-GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 115 -----~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
+++++.. +...++||||+ +++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcC
Confidence 4555554 67889999999 999999997543467999999999999999999999999 999999999999999
Q ss_pred CC--CCeeccCCCcccCCCC-----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh
Q 011349 189 DG--NPRLSCFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD 255 (488)
Q Consensus 189 ~~--~~kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~ 255 (488)
++ .+||+|||+++..... ....||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 8999999999765321 2347899999999999989999999999999999999999988654211
Q ss_pred h--hhcc--ccccccccccCC-CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 256 L--IRGK--NFLMLMDSCLEG-HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 256 ~--~~~~--~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
. .... .+.......... ......+.++.+++.+||..||.+|||+.++++.|+.+.......
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 1 0000 000000000000 001134688999999999999999999999999999998776543
No 160
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9e-45 Score=356.20 Aligned_cols=246 Identities=20% Similarity=0.161 Sum_probs=197.4
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCC-----CCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRS-----AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
|.+++.||+|+||.||+|.. .++..||||++... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 107 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVM 107 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEE
Confidence 47888999999999999995 56889999998643 2234568999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 011349 130 EFMPNETLSKHLFHW--------------------------------------ENQPMKWAMRVRVALYLAQALDYCSSK 171 (488)
Q Consensus 130 e~~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~ 171 (488)
||++||+|.+++... ....+++..++.++.||+.||.|||+.
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 187 (345)
T 3hko_A 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ 187 (345)
T ss_dssp ECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999988521 012346778899999999999999999
Q ss_pred CCcccccccCCceeecCCC--CCeeccCCCcccCCC--------CCccccccCCCCcccccc--CCcccCCceEeehHHH
Q 011349 172 GRALYHDLNTYRILFDQDG--NPRLSCFGLMKNSRD--------GKSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLL 239 (488)
Q Consensus 172 ~~iiH~Dlkp~Nill~~~~--~~kl~Dfgla~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il 239 (488)
+ |+||||||+|||++.++ .+||+|||+++.... .....||+.|+|||.+.+ ..++.++|||||||++
T Consensus 188 ~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 266 (345)
T 3hko_A 188 G-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266 (345)
T ss_dssp T-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred C-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence 9 99999999999998766 899999999975422 124568999999999975 6789999999999999
Q ss_pred HHHhhCCCCCCcchhhhhhccccccccccccC--CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE--GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 240 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
|||++|+.||.......... .+...... .......++.+.+|+.+||+.||.+|||+.+++++
T Consensus 267 ~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 267 HLLLMGAVPFPGVNDADTIS----QVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHSSCSSCCSSHHHHHH----HHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHCCCCCCCCChHHHHH----HHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 99999999886543222111 11111111 11112356889999999999999999999999987
No 161
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.2e-44 Score=360.21 Aligned_cols=244 Identities=16% Similarity=0.177 Sum_probs=191.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--------CChHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--------PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
.|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+|++++||||+++++++. .+..
T Consensus 136 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~ 214 (419)
T 3i6u_A 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDY 214 (419)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEE
T ss_pred cEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCce
Confidence 467888999999999999994 5689999999875321 11235889999999999999999999875 5568
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeeccCCCccc
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKN 202 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~ 202 (488)
++||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+|||+++.
T Consensus 215 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 215 YIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp EEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred EEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 99999999999999886 4567999999999999999999999999 9999999999999654 4599999999987
Q ss_pred CCCC---CccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC--
Q 011349 203 SRDG---KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF-- 274 (488)
Q Consensus 203 ~~~~---~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 274 (488)
.... ....||+.|+|||++.+ ..++.++|||||||++|+|+||..||....... .....+........
T Consensus 292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~----~~~~~i~~~~~~~~~~ 367 (419)
T 3i6u_A 292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQITSGKYNFIPE 367 (419)
T ss_dssp CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC----CHHHHHHTTCCCCCHH
T ss_pred cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH----HHHHHHhcCCCCCCch
Confidence 6543 34578999999999864 668889999999999999999999886532110 00011111000000
Q ss_pred -ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 -SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 -~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+..+.+|+.+||+.||.+|||+.++++|
T Consensus 368 ~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 368 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 11346789999999999999999999999987
No 162
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-44 Score=342.05 Aligned_cols=246 Identities=16% Similarity=0.159 Sum_probs=198.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
|.+.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|++++++++||||+++++++.+....++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 103 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE 103 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCC
Confidence 57788999999999999995 568899999987654 2345789999999999999999999999999999999999999
Q ss_pred CCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCC--
Q 011349 134 NETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 134 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~-- 206 (488)
+|+|.+.+... ....+++..++.++.||+.||.|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 104 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (285)
T 3is5_A 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH 182 (285)
T ss_dssp CCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred CCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc
Confidence 99999988532 3467999999999999999999999999 9999999999999 45688999999999765432
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....+|+.|+|||.+. +.++.++|||||||++|||++|+.||................ ... .......++++.++
T Consensus 183 ~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~l 258 (285)
T 3is5_A 183 STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE--PNY-AVECRPLTPQAVDL 258 (285)
T ss_dssp ----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCC-CC--CCCCHHHHHH
T ss_pred CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCC--ccc-ccccCcCCHHHHHH
Confidence 3456899999999986 568899999999999999999999987653332211111000 000 01111245789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||.+|||+.+++++
T Consensus 259 i~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 259 LKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHccCChhhCcCHHHHhcC
Confidence 999999999999999999976
No 163
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.6e-44 Score=363.92 Aligned_cols=248 Identities=16% Similarity=0.195 Sum_probs=192.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC------Ce
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 124 (488)
..|.+++.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+.+|+.++||||+++++++... ..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 457889999999999999999 4568999999997542 12245788999999999999999999998654 35
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.|+||||+++ +|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 142 ~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 7999999975 5666663 24999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-------------------
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF------------------- 262 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~------------------- 262 (488)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+...........
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 43 34678999999999999999999999999999999999999987642211000000
Q ss_pred --------------ccccccccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 263 --------------LMLMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 263 --------------~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
............ ....++++.+|+.+||..||++|||+.++++|-
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 000000000000 011267899999999999999999999999983
No 164
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.7e-44 Score=346.30 Aligned_cols=244 Identities=16% Similarity=0.260 Sum_probs=206.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+++.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++......++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 103 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence 57888999999999999994 5689999999976543 345789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
+++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ...
T Consensus 104 ~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 179 (303)
T 3a7i_A 104 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 179 (303)
T ss_dssp TEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCC
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCcc
Confidence 999999984 467999999999999999999999999 999999999999999999999999999765432 345
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.+|+.|+|||.+.+..++.++||||||+++|+|++|..|+......... ..+........+...+..+.+++.+|
T Consensus 180 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~~ 254 (303)
T 3a7i_A 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-----FLIPKNNPPTLEGNYSKPLKEFVEAC 254 (303)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCCSSCCHHHHHHHHHH
T ss_pred CCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH-----HHhhcCCCCCCccccCHHHHHHHHHH
Confidence 6899999999999989999999999999999999999887643221111 01111112233445567899999999
Q ss_pred ccCCCCCCCCHHHHHHHhc
Q 011349 290 LQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l~ 308 (488)
|..||.+|||+.+++++..
T Consensus 255 l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 255 LNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp CCSSGGGSCCHHHHTTCHH
T ss_pred cCCChhhCcCHHHHhhChh
Confidence 9999999999999998754
No 165
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-44 Score=353.66 Aligned_cols=248 Identities=17% Similarity=0.230 Sum_probs=195.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCC------e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGE------E 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 124 (488)
..|.+++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 3568889999999999999995 57999999999654322 2356889999999999999999999987653 4
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.|+||||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 69999999 7999999863 56999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc--------------------
Q 011349 205 DG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------------------- 262 (488)
Q Consensus 205 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-------------------- 262 (488)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+...........
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 43 35678999999999987 679999999999999999999999987542211000000
Q ss_pred --ccccccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 --LMLMDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 --~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+..... .......++.+.+|+.+||..||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000000 01223456789999999999999999999999997
No 166
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.5e-44 Score=352.51 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=200.4
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+..|.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.++++++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 345788999999999999999995 458999999987654322 34578999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+++++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 103 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999999988765 4556999999999999999999999999 999999999999999999999999999765432
Q ss_pred --CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc--------------------cc
Q 011349 207 --KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------------------FL 263 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------------------~~ 263 (488)
....+|+.|+|||.+.+. .++.++|||||||++|+|++|+.||............ ..
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 345689999999999875 6899999999999999999999988654321110000 00
Q ss_pred cccccccCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 MLMDSCLEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+..... .....++.+.+|+.+||+.||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000 112346789999999999999999999999986
No 167
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3e-44 Score=342.63 Aligned_cols=247 Identities=19% Similarity=0.226 Sum_probs=207.7
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
..+.+.+++.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 3456788999999999999999954 68889999986432 2234679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 92 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 92 MLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999999873 356999999999999999999999999 999999999999999999999999998765432
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||.+.+..++.++||||||+++|+|++|..||.......... .+.. ....++...+..+.++
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~l 242 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR----RIVN--VDLKFPPFLSDGSKDL 242 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHT--TCCCCCTTSCHHHHHH
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHH----HHhc--cccCCCCcCCHHHHHH
Confidence 34578999999999999899999999999999999999999886543221111 1111 1122344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+||..||.+|||+.++++|-
T Consensus 243 i~~~l~~~p~~Rps~~~ll~h~ 264 (284)
T 2vgo_A 243 ISKLLRYHPPQRLPLKGVMEHP 264 (284)
T ss_dssp HHHHSCSSGGGSCCHHHHHTCH
T ss_pred HHHHhhcCHhhCCCHHHHhhCH
Confidence 9999999999999999999873
No 168
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.5e-44 Score=338.73 Aligned_cols=246 Identities=19% Similarity=0.158 Sum_probs=203.1
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.+++.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++||||+
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEec
Confidence 4678899999999999999954 689999999875432 33567999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC------C
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------G 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~ 206 (488)
++++|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++..... .
T Consensus 88 ~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 164 (276)
T 2yex_A 88 SGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (276)
T ss_dssp TTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred CCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence 9999999996 4567999999999999999999999999 99999999999999999999999999875432 2
Q ss_pred CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||........... ...............+..+.++
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 241 (276)
T 2yex_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---DWKEKKTYLNPWKKIDSAPLAL 241 (276)
T ss_dssp CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH---HHHTTCTTSTTGGGSCHHHHHH
T ss_pred cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HhhhcccccCchhhcCHHHHHH
Confidence 34568999999999987665 7899999999999999999998865322111000 0011111111123456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||.+|||+.+++++
T Consensus 242 i~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 242 LHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp HHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHCCCCchhCCCHHHHhcC
Confidence 999999999999999999986
No 169
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6e-44 Score=342.37 Aligned_cols=247 Identities=17% Similarity=0.195 Sum_probs=201.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+.....||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 34445679999999999994 56889999999876655567899999999999999999999999999999999999999
Q ss_pred CChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCcccCCCC----Cc
Q 011349 135 ETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 135 gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~----~~ 208 (488)
++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||+++..... ..
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99999997532 235779999999999999999999999 999999999999987 899999999999865432 34
Q ss_pred cccccCCCCccccccCC--cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~--~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
..||+.|+|||.+.+.. ++.++||||||+++|+|+||+.||.......... ............+...+.++.+++
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li 259 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM---FKVGMFKVHPEIPESMSAEAKAFI 259 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH---HHHHHHCCCCCCCTTSCHHHHHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH---HhhccccccccccccCCHHHHHHH
Confidence 57899999999997643 7889999999999999999999875432111100 000001122334556678899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||+.||++|||+.+++.+
T Consensus 260 ~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 260 LKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHTTCSSTTTSCCHHHHHTS
T ss_pred HHHccCChhhCCCHHHHhcC
Confidence 99999999999999999986
No 170
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.5e-44 Score=352.16 Aligned_cols=252 Identities=17% Similarity=0.213 Sum_probs=194.8
Q ss_pred cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
..++.|.+++.||+|+||.||+|. ..+++.||||+++...... .+.+.+|+.++++++||||+++++++.+++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 345678999999999999999999 4578999999997654222 3467899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-----CCCCCeeccCCCccc
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-----QDGNPRLSCFGLMKN 202 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-----~~~~~kl~Dfgla~~ 202 (488)
||||++ |+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 111 v~e~~~-~~L~~~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMD--KNPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCS-EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCC-CCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999997 59999987 3456999999999999999999999999 99999999999994 455699999999976
Q ss_pred CCCC----CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc--------------
Q 011349 203 SRDG----KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------------- 263 (488)
Q Consensus 203 ~~~~----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------------- 263 (488)
.... ....+|+.|+|||++.+. .++.++|||||||++|||++|..||..............
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 5422 344679999999999874 489999999999999999999998865432111100000
Q ss_pred ------cccccc----cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 ------MLMDSC----LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ------~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... .....+...+.++.+|+.+||+.||.+|||+.++++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000 0000111245789999999999999999999999986
No 171
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.9e-45 Score=353.72 Aligned_cols=248 Identities=13% Similarity=0.170 Sum_probs=199.0
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec------CCe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE------GEE 124 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~------~~~ 124 (488)
.+.|.+++.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+++++ +||||+++++++.. .+.
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 34568889999999999999995 578999999997654 3457899999999999 79999999999976 467
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+++++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 899999999999999997654567999999999999999999999999 9999999999999999999999999988654
Q ss_pred CC----CccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 205 DG----KSYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 205 ~~----~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
.. ....+|+.|+|||.+. +..++.++|||||||++|+|+||..||.......... ...........+
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~ 256 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKS 256 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----HHHHSCCCCCSC
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH----HhhcCccccCCc
Confidence 32 3456899999999987 4678899999999999999999998876532211110 011111111123
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+..+.+++.+||..||.+|||+.++++|
T Consensus 257 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 3456789999999999999999999999986
No 172
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.7e-45 Score=352.76 Aligned_cols=251 Identities=19% Similarity=0.244 Sum_probs=196.4
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||+|+||.||+|... +++.||||++....... ...+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46788999999999999999954 78999999997544222 22466899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
++ |+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~ 158 (324)
T 3mtl_A 82 LD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD 158 (324)
T ss_dssp CS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred cc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence 97 689888865 3456999999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-------ccccccccC--------
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------LMLMDSCLE-------- 271 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-------~~~~~~~~~-------- 271 (488)
...+|+.|+|||.+.+ ..++.++|||||||++|+|+||+.||.+........... ...+.....
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence 3467999999999876 568999999999999999999999987653221110000 000000000
Q ss_pred -C--------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 272 -G--------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 272 -~--------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
. ......++++.+|+.+||+.||.+|||+.++++|-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 283 (324)
T 3mtl_A 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283 (324)
T ss_dssp CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence 0 00123457889999999999999999999999973
No 173
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1e-44 Score=357.99 Aligned_cols=251 Identities=20% Similarity=0.227 Sum_probs=203.9
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..+.+++.||+|+||.||+|... ++..||+|++...... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 45788899999999999999954 6899999999865322 245789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCC--CCCc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR--DGKS 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--~~~~ 208 (488)
++|++|.+++.. ...+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++.... ....
T Consensus 113 ~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 189 (360)
T 3eqc_A 113 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 189 (360)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence 999999999973 45699999999999999999999996 7 9999999999999999999999999986542 2234
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc---------------------------
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------------------------- 261 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------------------------- 261 (488)
..||+.|+|||++.+..++.++|||||||++|+|+||+.||............
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence 57899999999999999999999999999999999999988654322110000
Q ss_pred -------ccc----ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 262 -------FLM----LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 262 -------~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
... ..............+.++.+|+.+||+.||++|||+.++++|-
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 000 0000011111223567899999999999999999999999974
No 174
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.1e-44 Score=353.02 Aligned_cols=246 Identities=11% Similarity=0.088 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCceEEEEE------eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC---CCCCcccccceecCCe
Q 011349 54 CADNIVSEHGEKAPNVVYKGL------VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR---SERLVNLIGCCCEGEE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~ 124 (488)
..|.+++.||+|+||.||+|. ..+++.||||+++.. ....+.+|+.++..++ |+||+++++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 456788899999999999993 456889999999754 3567888888888886 9999999999999999
Q ss_pred eeEEEecCCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-----------CC
Q 011349 125 RLLVAEFMPNETLSKHLFHW---ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-----------DG 190 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-----------~~ 190 (488)
.++||||++||+|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999999642 3467999999999999999999999999 999999999999998 89
Q ss_pred CCeeccCCCcccCC---C---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccc
Q 011349 191 NPRLSCFGLMKNSR---D---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 191 ~~kl~Dfgla~~~~---~---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 264 (488)
.+||+|||+++... . .....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~------ 294 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK------ 294 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE------
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee------
Confidence 99999999996542 1 13456899999999999999999999999999999999999887543221111
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCC-CCHHHHHHHhchhhcc
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRER-PNAKSLVASLTPLQKE 313 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-ps~~~il~~l~~~~~~ 313 (488)
+...... . ..+..+.+++..|+..+|.+| |++.++.+.|+.+...
T Consensus 295 -~~~~~~~-~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 -PEGLFRR-L--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -ECSCCTT-C--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -echhccc-c--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 1111111 1 236778999999999999999 7888888888877665
No 175
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.8e-44 Score=349.99 Aligned_cols=255 Identities=20% Similarity=0.288 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+.+++.||+|+||.||+|.+ .++..||||++..... .....+.+|+.++++++||||+++++++......+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 3467889999999999999983 2477899999975432 23457899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCC
Q 011349 127 LVAEFMPNETLSKHLFHWEN-----QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFG 198 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg 198 (488)
+||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++. +..+||+|||
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECccc
Confidence 99999999999999975322 45899999999999999999999999 999999999999984 4569999999
Q ss_pred CcccCCC------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccC
Q 011349 199 LMKNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 199 la~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
+++.... .....+|+.|+|||.+.+..++.++|||||||++|+|+| |..|+......... ..+.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~~~ 263 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL-----EFVTSGGR 263 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTCC
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHH-----HHHhcCCC
Confidence 9874322 234466889999999998899999999999999999998 87777654222111 11111112
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...+..++..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 264 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 264 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 2334456788999999999999999999999999999887654
No 176
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.5e-44 Score=344.18 Aligned_cols=257 Identities=14% Similarity=0.157 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccce-ecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC-CEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~ 131 (488)
+.|.+++.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++.++|++++..+..+ ......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 3568889999999999999994 679999999987654 335789999999999988877666555 556778999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~-- 206 (488)
+ +++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 9 8999999964 3457999999999999999999999999 9999999999999 48899999999999765432
Q ss_pred ---------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC---CC
Q 011349 207 ---------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG---HF 274 (488)
Q Consensus 207 ---------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~ 274 (488)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||....... .......+....... ..
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 242 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT-KRQKYERISEKKMSTPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS-SSSHHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh-hhhhhhhhcccccCCchHHH
Confidence 34568999999999999899999999999999999999999886531100 000000000000000 11
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCC
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 316 (488)
....++++.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 243 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 233467899999999999999999999999999998877543
No 177
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=341.53 Aligned_cols=246 Identities=17% Similarity=0.180 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC----CCChHHHHHHHHHHhhcCCCCCccccccee--cCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA----WPDSRQFLEEARAVGLLRSERLVNLIGCCC--EGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~ 126 (488)
+.|.+++.||+|+||.||+|.. .+++.||||+++... ......+.+|+.++++++||||+++++++. +....+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 5678899999999999999995 568899999997532 233567999999999999999999999984 456789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||++++ |.+++.......+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 999999865 777776655678999999999999999999999999 999999999999999999999999999865432
Q ss_pred ------CccccccCCCCccccccCC--cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 207 ------KSYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
....+|+.|+|||++.+.. .+.++||||||+++|||++|..||........... +... ....+..+
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----i~~~--~~~~~~~~ 236 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN----IGKG--SYAIPGDC 236 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHC--CCCCCSSS
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH----HhcC--CCCCCCcc
Confidence 2346799999999997643 47799999999999999999998875432211110 0000 11234456
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+.+++.+||..||.+|||+.+++++-
T Consensus 237 ~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 237 GPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 78899999999999999999999999873
No 178
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.9e-44 Score=379.07 Aligned_cols=246 Identities=20% Similarity=0.263 Sum_probs=208.4
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCC---CCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRS---AWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
..+.+.+++.||+|+||.||+|.. .+++.||||+++.. .....+.+..|..++..+ +||||+++++++.+.+.+|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 355778999999999999999994 46889999998743 123456788999999988 7999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD- 205 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 205 (488)
|||||++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ ||||||||+|||++.++++||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999999973 356999999999999999999999999 99999999999999999999999999985332
Q ss_pred ---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 206 ---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 206 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|..||........... +... ...++...++++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~ 569 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEH--NVAYPKSMSKEA 569 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHSS--CCCCCTTSCHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHH----HHhC--CCCCCccCCHHH
Confidence 2356789999999999999999999999999999999999999876533222111 1111 123455677899
Q ss_pred HHHHHHhccCCCCCCCCH-----HHHHHH
Q 011349 283 VRLASRCLQYEPRERPNA-----KSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~-----~~il~~ 306 (488)
.+||.+||+.||.+||++ ++|++|
T Consensus 570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 570 VAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 999999999999999997 788776
No 179
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-45 Score=357.76 Aligned_cols=250 Identities=18% Similarity=0.210 Sum_probs=203.7
Q ss_pred CcccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCC----CCChHHHHHHHHHHhhc-CCCCCcccccceecCCe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSA----WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 124 (488)
..|.+++.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.+++.+ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 4678899999999999999996 478999999987532 12345678899999999 69999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999999973 456999999999999999999999999 9999999999999999999999999997653
Q ss_pred CC-----CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 205 DG-----KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 205 ~~-----~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
.. ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.................. ....++..
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~ 288 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQE 288 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCTT
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCCcc
Confidence 22 24578999999999986 34788999999999999999999988643211100000001110 12234556
Q ss_pred hHHHHHHHHHHhccCCCCCCC-----CHHHHHHHhc
Q 011349 278 DGTELVRLASRCLQYEPRERP-----NAKSLVASLT 308 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rp-----s~~~il~~l~ 308 (488)
.+..+.+|+.+||..||.+|| ++.+++++..
T Consensus 289 ~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 289 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 678899999999999999999 9999999864
No 180
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-44 Score=360.21 Aligned_cols=259 Identities=14% Similarity=0.111 Sum_probs=208.4
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCC--eeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE--ERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 130 (488)
.|.+.+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 5788899999999999999954 58999999997543 233567889999999999999999999987654 6899999
Q ss_pred cCCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee----cCCCCCeeccCCCcccCCC
Q 011349 131 FMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~~~ 205 (488)
|++||+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 999999999997432 234999999999999999999999999 9999999999999 7778899999999987654
Q ss_pred C---CccccccCCCCcccccc--------CCcccCCceEeehHHHHHHhhCCCCCCcchhhh-----h---hccccccc-
Q 011349 206 G---KSYSTNLAFTPPEYLRT--------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-----I---RGKNFLML- 265 (488)
Q Consensus 206 ~---~~~~~t~~y~aPE~~~~--------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~-----~---~~~~~~~~- 265 (488)
. ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... . ........
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (396)
T 4eut_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI 248 (396)
T ss_dssp GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCC
T ss_pred CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccc
Confidence 3 24568999999999865 567889999999999999999999875321110 0 00000000
Q ss_pred ------------c--ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 266 ------------M--DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 266 ------------~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+ ........+...+..+.+++.+||+.||++|||+.++++.+..+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred hhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 0 001112344667889999999999999999999999999998876653
No 181
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.1e-44 Score=349.67 Aligned_cols=249 Identities=14% Similarity=0.138 Sum_probs=202.9
Q ss_pred cccc-ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 56 DNIV-SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
|.+. +.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++..+ +||||+++++++...+..++|||
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e 109 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE 109 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence 3455 6799999999999995 4689999999975432 2356899999999999 47999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCCCC-
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~- 206 (488)
|++||+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 999999999986545577999999999999999999999999 999999999999987 789999999999876543
Q ss_pred --CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||.............. .............++.+.+
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~ 266 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ--VNVDYSEETFSSVSQLATD 266 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCCCTTTTTTSCHHHHH
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh--cccccCchhhcccCHHHHH
Confidence 245789999999999999999999999999999999999998865433221111000 0111112223346788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+||+.||.+|||+.+++++-
T Consensus 267 li~~~L~~dP~~Rpt~~~ll~h~ 289 (327)
T 3lm5_A 267 FIQSLLVKNPEKRPTAEICLSHS 289 (327)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTCG
T ss_pred HHHHHcCCChhhCcCHHHHhCCH
Confidence 99999999999999999999873
No 182
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.3e-44 Score=342.12 Aligned_cols=254 Identities=15% Similarity=0.174 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.|.+++.||+|+||.||+|... +++.||||+++..... ..+.+.+|+.++++++||||+++++++.+....++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 3578889999999999999964 6899999998765322 35679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNS 203 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 203 (488)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999963 456999999999999999999999999 99999999999998877 8999999999866
Q ss_pred CCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 204 RDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 204 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
... ....+|+.|+|||.+.+..++.++||||||+++|+|++|..||.............. .............+.
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISA--VNYDFDEEYFSNTSE 240 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT--TCCCCCHHHHTTCCH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHh--cccCCcchhcccCCH
Confidence 443 234689999999999988999999999999999999999998865432211110000 000000011123457
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH--hchhhcc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS--LTPLQKE 313 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~--l~~~~~~ 313 (488)
.+.+++.+||..||.+|||+.+++++ ++.++..
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 89999999999999999999999986 4444443
No 183
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=7.3e-44 Score=365.72 Aligned_cols=247 Identities=19% Similarity=0.171 Sum_probs=203.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||+||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++.+....++||||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 102 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEc
Confidence 468899999999999999995 478999999986432 23467899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec---CCCCCeeccCCCcccCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~-- 206 (488)
+.||+|.+.+.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 103 ~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 999999998863 456999999999999999999999999 99999999999995 5667999999999866543
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||++.+ .++.++|||||||++|+|++|.+||................. ....+.....++++.+|
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKY--AFDLPQWRTISDDAKDL 256 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCSGGGGGSCHHHHHH
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCcccCCCCHHHHHH
Confidence 24578999999999975 589999999999999999999999876532221111000000 00011112456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+||..||.+|||+.++++|-
T Consensus 257 i~~~L~~dp~~R~t~~~~l~hp 278 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEHP 278 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHCH
T ss_pred HHHHcCCChhhCcCHHHHhcCH
Confidence 9999999999999999999973
No 184
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.1e-44 Score=379.32 Aligned_cols=244 Identities=22% Similarity=0.270 Sum_probs=202.6
Q ss_pred ccCCCCCCceEEEEEe---CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLV---DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++||+|+||.||+|.+ ..++.||||+++.... ...+.+.+|+.+|++++|||||++++++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 3689999999999964 3467899999976432 22468999999999999999999999986 4568999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------- 207 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------- 207 (488)
|+|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 454 g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 99999997 4567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||........ ...+........+..++.++.+|+
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-----~~~i~~~~~~~~p~~~~~~l~~li 605 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-----TAMLEKGERMGCPAGCPREMYDLM 605 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2345678999999999999999999999999999998 9988866433221 122222223345566788999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+||+.||++|||+.+|++.|+.+..
T Consensus 606 ~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 606 NLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 99999999999999999999987654
No 185
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.8e-44 Score=349.01 Aligned_cols=252 Identities=17% Similarity=0.180 Sum_probs=191.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCccccccee--------cCCe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCC--------EGEE 124 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~--------~~~~ 124 (488)
.+++++.||+|+||.||+|.. .+++.||||++........+.+.+|+.++.++. ||||+++++++. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 468889999999999999995 578999999987655444567899999999996 999999999883 3445
Q ss_pred eeEEEecCCCCChhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeecCCCCCeeccCCCccc
Q 011349 125 RLLVAEFMPNETLSKHLFH-WENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
.++||||+. |+|.+++.. .....+++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+++.
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 899999996 799888864 23457999999999999999999999985 499999999999999999999999999986
Q ss_pred CCCCC----------------ccccccCCCCcccc---ccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc
Q 011349 203 SRDGK----------------SYSTNLAFTPPEYL---RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL 263 (488)
Q Consensus 203 ~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 263 (488)
..... ...+|+.|+|||++ .+..++.++|||||||++|+|+||+.||.......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------- 260 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------- 260 (337)
T ss_dssp CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-------
Confidence 54322 33578999999998 55678999999999999999999999886432211
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..............+..+.+|+.+||+.||.+|||+.+++++|+.+.....
T Consensus 261 -~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 -IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 111111112223344668999999999999999999999999999887543
No 186
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.9e-44 Score=367.80 Aligned_cols=245 Identities=18% Similarity=0.135 Sum_probs=205.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 467889999999999999995 478999999997543 2346789999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCCC
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~~ 207 (488)
|+.||+|.+.+. ....+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 107 ~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 107 VYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred cCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 999999999887 4567999999999999999999999999 9999999999999 567899999999998765443
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC--CCChhhHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGTEL 282 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l 282 (488)
...||+.|+|||++.+ .++.++|||||||++|+|++|.+||........... +....... +.....++.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~s~~~ 258 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK----VEKGKYTFELPQWKKVSESA 258 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCCCCCSGGGGGSCHHH
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHcCCCCCCCcccccCCHHH
Confidence 3468999999999975 689999999999999999999999876432221111 11111111 1113456889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.+|+.+||+.||.+|||+.++++|-
T Consensus 259 ~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 259 KDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred HHHHHHHCCCChhHCcCHHHHhhCh
Confidence 9999999999999999999999974
No 187
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.6e-44 Score=348.08 Aligned_cols=244 Identities=16% Similarity=0.139 Sum_probs=205.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.+++.||+|+||.||++.. .+++.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 4678889999999999999995 45888999998754322 2457889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||+++++|.+++.. ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 197 (335)
T 2owb_A 121 ELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 197 (335)
T ss_dssp CCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred ecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCccc
Confidence 99999999998863 456999999999999999999999999 999999999999999999999999999865422
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||.+.+..++.++|||||||++|+|++|+.||.......... .+... ....+...+..+.+|
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~l 271 (335)
T 2owb_A 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----RIKKN--EYSIPKHINPVAASL 271 (335)
T ss_dssp BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHHT--CCCCCTTSCHHHHHH
T ss_pred ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH----HHhcC--CCCCCccCCHHHHHH
Confidence 24568999999999998889999999999999999999999886543221110 00000 112344556789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||++|||+.+++++
T Consensus 272 i~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 272 IQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999987
No 188
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.6e-43 Score=348.25 Aligned_cols=253 Identities=18% Similarity=0.190 Sum_probs=198.9
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec-------
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE------- 121 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 121 (488)
..+.|.+++.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.+++.++||||+++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 346788999999999999999995 57899999998655422 24578899999999999999999999876
Q ss_pred -CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 122 -GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 122 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
.+..++||||++ ++|.+.+.. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCE-HDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccC-CCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 346899999997 577777754 3456999999999999999999999999 999999999999999999999999999
Q ss_pred ccCCC--------CCccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-------ccc
Q 011349 201 KNSRD--------GKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------FLM 264 (488)
Q Consensus 201 ~~~~~--------~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-------~~~ 264 (488)
+.... .....||+.|+|||++.+ ..++.++|||||||++|||+||.+||............ ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 76532 123467999999999876 45799999999999999999999988754322110000 000
Q ss_pred ccccc------------cCCCCC--h-----hhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 265 LMDSC------------LEGHFS--N-----DDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 265 ~~~~~------------~~~~~~--~-----~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
..... ...... . ..++.+.+|+.+||+.||.+|||+.++++|-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 313 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCC
Confidence 00000 000000 0 0146689999999999999999999999983
No 189
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=8.9e-45 Score=359.78 Aligned_cols=248 Identities=13% Similarity=0.025 Sum_probs=184.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhc--CCCCCccccc-------ceecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLL--RSERLVNLIG-------CCCEG 122 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l--~h~niv~~~~-------~~~~~ 122 (488)
+.+++.||+|+||.||+|.+ .+|+.||||++....... .+.+.+|+.+++.+ +||||++++. ++...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 67888999999999999995 478999999998765322 34677886555555 6999887553 33222
Q ss_pred -----------------CeeeEEEecCCCCChhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCcccccc
Q 011349 123 -----------------EERLLVAEFMPNETLSKHLFHWENQPMKWAMR------VRVALYLAQALDYCSSKGRALYHDL 179 (488)
Q Consensus 123 -----------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~iiH~Dl 179 (488)
...++||||++ |+|.+++... +..+++..+ +.++.||+.||.|||+++ |+||||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrDi 220 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGHF 220 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETTC
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCcC
Confidence 34799999998 8999999752 234566666 788899999999999999 999999
Q ss_pred cCCceeecCCCCCeeccCCCcccCCCCC-ccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhh
Q 011349 180 NTYRILFDQDGNPRLSCFGLMKNSRDGK-SYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL 256 (488)
Q Consensus 180 kp~Nill~~~~~~kl~Dfgla~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~ 256 (488)
||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.......
T Consensus 221 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~ 300 (371)
T 3q60_A 221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI 300 (371)
T ss_dssp SGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTC
T ss_pred CHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccc
Confidence 9999999999999999999998776554 5567899999999987 678999999999999999999999887653221
Q ss_pred hhcccc---ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 257 IRGKNF---LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 257 ~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... ................++.+.+|+.+||+.||++|||+.++++|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 301 KGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred ccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111110 11111111112223567899999999999999999999999876
No 190
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-43 Score=348.22 Aligned_cols=253 Identities=19% Similarity=0.191 Sum_probs=197.4
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-----hHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-----SRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
...|.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 34578889999999999999995 468999999997543221 246889999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++ +|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 99999985 88888864 3456999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc-------ccc-------c
Q 011349 207 ----KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------MLM-------D 267 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------~~~-------~ 267 (488)
....+|+.|+|||.+.+. .++.++|||||||++|||++|.+|+.+..........+. ..+ +
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence 245689999999999764 588999999999999999999988765432111000000 000 0
Q ss_pred cccC---CCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 268 SCLE---GHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 268 ~~~~---~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.... ... ....+.++.+|+.+||..||.+|||+.++++|-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 0000 000 1234578999999999999999999999999843
No 191
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.4e-44 Score=350.80 Aligned_cols=251 Identities=16% Similarity=0.216 Sum_probs=202.2
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhh--cCCCCCcccccceecCC----eeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGL--LRSERLVNLIGCCCEGE----ERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~ 129 (488)
+.+.+.||+|+||.||+|.. +|+.||||+++.. ....+.+|++++.. ++||||+++++++.... ..++||
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~ 119 (342)
T 1b6c_B 44 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 119 (342)
T ss_dssp CEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEE
T ss_pred EEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEE
Confidence 47888999999999999997 5889999999643 35678899999988 68999999999998765 789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS--------SKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
||+++|+|.+++.. ..+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|||++.
T Consensus 120 e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 195 (342)
T 1b6c_B 120 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 195 (342)
T ss_dssp CCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCce
Confidence 99999999999953 46999999999999999999999 778 9999999999999999999999999997
Q ss_pred cCCCC--------CccccccCCCCccccccC------CcccCCceEeehHHHHHHhhC----------CCCCCcchhhhh
Q 011349 202 NSRDG--------KSYSTNLAFTPPEYLRTG------RVIPESVVYSFGTLLLDLLSG----------KHIPPSHALDLI 257 (488)
Q Consensus 202 ~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDv~slG~il~el~tg----------~~p~~~~~~~~~ 257 (488)
..... ....||+.|+|||.+.+. .++.++|||||||++|||+|| ..||........
T Consensus 196 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~ 275 (342)
T 1b6c_B 196 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 275 (342)
T ss_dssp EEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred eccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc
Confidence 65432 234689999999999865 344789999999999999999 555543211000
Q ss_pred hccccc-cccccccCCCCC-----hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 258 RGKNFL-MLMDSCLEGHFS-----NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 258 ~~~~~~-~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
....+. ...........+ ..++..+.+|+.+||+.||++|||+.+++++|+.+..+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 276 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 000000 111111222222 356788999999999999999999999999999988764
No 192
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.1e-44 Score=341.54 Aligned_cols=254 Identities=17% Similarity=0.210 Sum_probs=205.6
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCccccccee--cCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCC--EGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~l 127 (488)
.+.|.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 45678899999999999999995 46899999999765432 2456899999999999999999999875 3568999
Q ss_pred EEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCC----cccccccCCceeecCCCCCeeccCCCcc
Q 011349 128 VAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGR----ALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
||||+++++|.+++... ....+++..++.++.||+.||.|||+.++ ++||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999998642 34559999999999999999999999763 9999999999999999999999999998
Q ss_pred cCCCCC----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 202 NSRDGK----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 202 ~~~~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
...... ...+|+.|+|||.+.+..++.++||||||+++|+|+||..|+.......... .+........+..
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~i~~~~~~~~~~~ 239 (279)
T 2w5a_A 165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG-----KIREGKFRRIPYR 239 (279)
T ss_dssp HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-----HHHHTCCCCCCTT
T ss_pred eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHH-----HHhhcccccCCcc
Confidence 765433 3467899999999998889999999999999999999998876543221111 1111111234445
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
.+.++.+++.+||+.||.+|||+.++++++....
T Consensus 240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 240 YSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 6788999999999999999999999999875433
No 193
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.8e-44 Score=345.03 Aligned_cols=247 Identities=18% Similarity=0.206 Sum_probs=199.0
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.+++.||+|+||.||+|... +++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 99 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCT
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCC
Confidence 4688899999999999999964 589999999987766667889999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC----CCCCcc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS----RDGKSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~~~ 209 (488)
+++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++... ......
T Consensus 100 ~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (302)
T 2j7t_A 100 GGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177 (302)
T ss_dssp TEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred CCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence 9999998864 2456999999999999999999999999 999999999999999999999999987532 123345
Q ss_pred ccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 210 STNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 210 ~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
.||+.|+|||.+. +..++.++||||||+++|+|++|..|+............... .......+...+..+.+
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 254 (302)
T 2j7t_A 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---DPPTLLTPSKWSVEFRD 254 (302)
T ss_dssp -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS---CCCCCSSGGGSCHHHHH
T ss_pred cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc---CCcccCCccccCHHHHH
Confidence 7899999999983 567889999999999999999999887654221111000000 00111223455788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||+.||.+|||+.++++|
T Consensus 255 li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 255 FLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHHHcccChhhCCCHHHHhcC
Confidence 9999999999999999999876
No 194
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.4e-44 Score=361.59 Aligned_cols=249 Identities=16% Similarity=0.202 Sum_probs=194.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecC-----Cee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 125 (488)
..|.+++.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.+|++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 3568899999999999999994 56889999999754322 245789999999999999999999998766 568
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
|+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999996 69999997 4567999999999999999999999999 99999999999999999999999999986543
Q ss_pred C--------------------------CccccccCCCCcccc-ccCCcccCCceEeehHHHHHHhhCCCCCC--------
Q 011349 206 G--------------------------KSYSTNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLSGKHIPP-------- 250 (488)
Q Consensus 206 ~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~sDv~slG~il~el~tg~~p~~-------- 250 (488)
. ....||+.|+|||++ .+..++.++|||||||++|||++|..|+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p 261 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence 2 345789999999986 45679999999999999999998544332
Q ss_pred ---cchh------------------hhh------------------hcccccccccccc-CCCC-----ChhhHHHHHHH
Q 011349 251 ---SHAL------------------DLI------------------RGKNFLMLMDSCL-EGHF-----SNDDGTELVRL 285 (488)
Q Consensus 251 ---~~~~------------------~~~------------------~~~~~~~~~~~~~-~~~~-----~~~~~~~l~~l 285 (488)
+... +.. ........+.... .... .+..++++.+|
T Consensus 262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 341 (432)
T 3n9x_A 262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341 (432)
T ss_dssp SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence 2110 000 0000000000000 0000 02356789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||..||.+|||+.++++|
T Consensus 342 l~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 342 LESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp HHHHSCSSTTTSCCHHHHHTC
T ss_pred HHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999997
No 195
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.2e-45 Score=363.68 Aligned_cols=240 Identities=13% Similarity=0.091 Sum_probs=188.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHH---HHHhhcCCCCCccccc-------ce
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEA---RAVGLLRSERLVNLIG-------CC 119 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~---~~l~~l~h~niv~~~~-------~~ 119 (488)
..+.+++.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+ +++++++|||||++++ ++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 456778899999999999999 4679999999997442 23356789999 5555668999999984 44
Q ss_pred ecCC-----------------eeeEEEecCCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc
Q 011349 120 CEGE-----------------ERLLVAEFMPNETLSKHLFHWE-----NQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177 (488)
Q Consensus 120 ~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~ 177 (488)
...+ ..++||||+ +|+|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHr 230 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHT 230 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECS
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecC
Confidence 3332 378999999 689999997421 123445888999999999999999999 9999
Q ss_pred cccCCceeecCCCCCeeccCCCcccCCCC-CccccccCCCCccccccC-----------CcccCCceEeehHHHHHHhhC
Q 011349 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTG-----------RVIPESVVYSFGTLLLDLLSG 245 (488)
Q Consensus 178 Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~sDv~slG~il~el~tg 245 (488)
||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||+||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999865443 23456 999999999887 799999999999999999999
Q ss_pred CCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 246 KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 246 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.||....... ....+.. .....++++.+|+.+||..||++|||+.+++++
T Consensus 310 ~~Pf~~~~~~~----~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 310 DLPITKDAALG----GSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp SCCC------C----CSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred CCCCccccccc----chhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99886542111 1111111 112446789999999999999999999999985
No 196
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.1e-44 Score=343.72 Aligned_cols=253 Identities=21% Similarity=0.260 Sum_probs=197.5
Q ss_pred CcccccccCCCCCCceEEEEEeC--CCc--EEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD--EDR--WIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+.+++.||+|+||.||+|.+. +++ .||||+++.... ...+.+.+|+.++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 35788899999999999999843 333 689999976532 23467899999999999999999999987654 89
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 97 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeEecccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 99999999999999864 2356999999999999999999999999 999999999999999999999999999876543
Q ss_pred C-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 207 K-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 207 ~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
. ...+|+.|+|||.+.+..++.++||||||+++|+|++ |..||.......... .+.........+...
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~ 250 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH----KIDKEGERLPRPEDC 250 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HHHTSCCCCCCCTTC
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH----HHHccCCCCCCCcCc
Confidence 2 2345778999999998889999999999999999999 888876543221111 111111122334456
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+..+.+++.+||..||.+|||+.++++.|+.+...
T Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 78899999999999999999999999999987764
No 197
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8.1e-44 Score=366.02 Aligned_cols=246 Identities=18% Similarity=0.168 Sum_probs=198.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||+|.. .++..||||++.... ......+.+|+.+++.++||||+++++++.+....++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 468899999999999999995 468899999997653 23356799999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~-- 206 (488)
++||+|.+.+.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 999999998863 456999999999999999999999999 999999999999975 455999999999865443
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||++. +.++.++|||||||++|+|++|.+||.................. .........++.+.+|
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT--FDSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCchhcccCCHHHHHH
Confidence 3457899999999986 56999999999999999999999998765332211111000000 0001112356789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||.+|||+.++++|
T Consensus 272 i~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHCCCChhhCccHHHHhcC
Confidence 999999999999999999987
No 198
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-43 Score=342.04 Aligned_cols=247 Identities=15% Similarity=0.187 Sum_probs=201.3
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...+.+++.||+|+||.||+|... +|+.||||++.... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 345788999999999999999954 58999999997643 457899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 106 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 106 CGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp CTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 999999999853 3467999999999999999999999999 999999999999999999999999999765432 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...+|+.|+|||.+.+..++.++||||||+++|+|++|..||.......... ..... .......+...+..+.+++.
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~l~~li~ 260 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MIPTN--PPPTFRKPELWSDNFTDFVK 260 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHS--CCCCCSSGGGSCHHHHHHHH
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhcC--CCcccCCcccCCHHHHHHHH
Confidence 4568899999999999899999999999999999999998876532211100 00000 00111123345688999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..||.+|||+.+++++
T Consensus 261 ~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 261 QCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HHTCSCTTTSCCHHHHTTS
T ss_pred HHccCChhhCcCHHHHHhC
Confidence 9999999999999999986
No 199
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.5e-44 Score=342.74 Aligned_cols=256 Identities=14% Similarity=0.154 Sum_probs=203.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccce-ecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC-CEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~ 132 (488)
.|.+++.||+|+||.||+|.. .+++.||||++.... ....+.+|+.+++.++|++++..+..+ ..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 4hgt_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence 457888999999999999994 678999999876543 234688999999999988877766655 5667889999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCC---
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~--- 206 (488)
+++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 -~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 88 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp -CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred -CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 8999999864 3456999999999999999999999999 9999999999999 78999999999999865432
Q ss_pred --------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC---CCC
Q 011349 207 --------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG---HFS 275 (488)
Q Consensus 207 --------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 275 (488)
....||+.|+|||.+.+..++.++|||||||++|+|++|+.||........ .............. ...
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 243 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPIEVLC 243 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSCHHHHT
T ss_pred ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh-hhhhhhhhcccccchhhhhh
Confidence 245689999999999999999999999999999999999999865311100 00000000000000 011
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCC
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 316 (488)
...++.+.+++.+||+.||++|||+.++++.|+.+......
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 244 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 23467899999999999999999999999999998876543
No 200
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=9.8e-44 Score=337.58 Aligned_cols=244 Identities=19% Similarity=0.239 Sum_probs=198.4
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.|.+++.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 46788899999999999999964 78999999986432 233567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 167 (276)
T 2h6d_A 91 EYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 167 (276)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred eccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcce
Confidence 99999999999973 356999999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||........... +... ....+...+..+.++
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~--~~~~~~~~~~~l~~l 241 (276)
T 2h6d_A 168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK----IRGG--VFYIPEYLNRSVATL 241 (276)
T ss_dssp ---------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHH
T ss_pred ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH----hhcC--cccCchhcCHHHHHH
Confidence 24467899999999987665 6899999999999999999998865432211110 0000 112344456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||.+|||+.++++|
T Consensus 242 i~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 242 LMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHccCChhhCCCHHHHHhC
Confidence 999999999999999999997
No 201
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.2e-44 Score=353.68 Aligned_cols=248 Identities=17% Similarity=0.207 Sum_probs=183.3
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecC------Ce
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEG------EE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 124 (488)
..|.+++.||+|+||.||+|. ..+|+.||||++...... ..+.+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 456889999999999999999 457899999999764322 245788999999999999999999998654 56
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++|||++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 689999885 367999999999999999999999999 9999999999999999999999999998754
Q ss_pred CC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-------------------cc
Q 011349 205 DG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------------------FL 263 (488)
Q Consensus 205 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-------------------~~ 263 (488)
.. ....+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||.+.......... ..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 43 35678999999999987 67899999999999999999999998764321110000 00
Q ss_pred cccc---cccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 MLMD---SCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~~~---~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+. ...... .....++.+.+|+.+||..||.+|||+.++++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 000000 011245779999999999999999999999987
No 202
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.2e-44 Score=359.89 Aligned_cols=250 Identities=17% Similarity=0.189 Sum_probs=201.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc------CCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL------RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~~l 127 (488)
.|.+++.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+.+++.+ .|+||+++++++......++
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 468889999999999999984 468999999997543 2245678899998888 56799999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC--CeeccCCCcccCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--PRLSCFGLMKNSRD 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~~~~ 205 (488)
||||+. ++|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++. +||+|||++.....
T Consensus 177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 999996 79999997655567999999999999999999999999 999999999999999887 99999999976544
Q ss_pred C-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------------cccccc
Q 011349 206 G-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------------FLMLMD 267 (488)
Q Consensus 206 ~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------------~~~~~~ 267 (488)
. ....+|+.|+|||++.+..++.++|||||||++|||+||.+||............ ....++
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~ 334 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBC
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccC
Confidence 3 3567899999999999999999999999999999999999888654221100000 000000
Q ss_pred c--------------------------------ccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 268 S--------------------------------CLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 268 ~--------------------------------~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
. ... ...+...++.+.+|+.+||+.||++|||+.++++|-
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hp 410 (429)
T 3kvw_A 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHP 410 (429)
T ss_dssp TTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred CCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCCh
Confidence 0 000 001112257799999999999999999999999973
No 203
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.6e-43 Score=343.59 Aligned_cols=244 Identities=16% Similarity=0.202 Sum_probs=199.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceec--CCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCE--GEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~ 129 (488)
..|.+++.||+|+||.||+|. ..+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 467889999999999999998 467899999999743 3578999999999997 9999999999987 56789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~-- 206 (488)
||+++++|.+++. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 9999999999884 3899999999999999999999999 99999999999999776 8999999999865433
Q ss_pred -CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh---------hc----------------
Q 011349 207 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI---------RG---------------- 259 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~---------~~---------------- 259 (488)
....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||........ ..
T Consensus 187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence 34567899999999987 6789999999999999999999988843211000 00
Q ss_pred -------cccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 -------KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 -------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......+........+...++++.+|+.+||+.||.+|||+.++++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000111111222233357889999999999999999999999987
No 204
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=9.9e-44 Score=340.15 Aligned_cols=246 Identities=19% Similarity=0.218 Sum_probs=198.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~l 127 (488)
.+.+.+.||+|+||.||+|.. .++..||+|++...... ..+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 356777899999999999995 56888999998754322 24578999999999999999999998865 356899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeec-CCCCCeeccCCCcccCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~ 205 (488)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ +++||||||+|||++ .++.+||+|||++.....
T Consensus 107 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999963 356999999999999999999999985 599999999999997 889999999999976544
Q ss_pred CC--ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 GK--SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 ~~--~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.. ...||+.|+|||.+. +.++.++|||||||++|+|++|+.||........... ...........+...++++.
T Consensus 185 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~ 260 (290)
T 1t4h_A 185 SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPEVK 260 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHHHH
T ss_pred cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHH---HHhccCCccccCCCCCHHHH
Confidence 32 356899999999887 4689999999999999999999998865322111110 01111111112233457899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||+.||.+|||+.++++|
T Consensus 261 ~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 261 EIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhhCCCHHHHhhC
Confidence 99999999999999999999986
No 205
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.1e-44 Score=344.14 Aligned_cols=253 Identities=18% Similarity=0.261 Sum_probs=186.9
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+.+++.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 4567889999999999999999 45788999999875432 234678899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 131 FMPNETLSKHLFHW------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 131 ~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
|++|++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 172 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLA 172 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence 99999999998631 3456999999999999999999999999 9999999999999999999999999987543
Q ss_pred CC---------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc----ccccccccccc
Q 011349 205 DG---------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG----KNFLMLMDSCL 270 (488)
Q Consensus 205 ~~---------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~ 270 (488)
.. ....+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||.......... ...........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (303)
T 2vwi_A 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ 252 (303)
T ss_dssp ---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC---
T ss_pred cCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccc
Confidence 22 23468999999999876 568999999999999999999999886532211110 00000001111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........+..+.+++.+||+.||.+|||+.+++++
T Consensus 253 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 253 DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp --CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 112233456789999999999999999999999986
No 206
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=9.4e-44 Score=345.00 Aligned_cols=255 Identities=20% Similarity=0.246 Sum_probs=200.9
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.++.+.+++.||+|+||.||+|.... .||||+++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35677899999999999999998743 399999975432 23456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||++|++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++ ++.+||+|||+++....
T Consensus 109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999964 3446999999999999999999999999 99999999999998 68999999999875421
Q ss_pred -----CCccccccCCCCcccccc---------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC
Q 011349 206 -----GKSYSTNLAFTPPEYLRT---------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 206 -----~~~~~~t~~y~aPE~~~~---------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
.....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||............ ......
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~~ 261 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM----GTGMKP 261 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHH----HTTCCC
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh----ccCCCC
Confidence 123357899999999874 34788999999999999999999988654332211111 011111
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
...+...+.++.+++.+||..||.+|||+.++++.|+.+.....
T Consensus 262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11122345679999999999999999999999999999887653
No 207
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.3e-43 Score=338.26 Aligned_cols=245 Identities=16% Similarity=0.128 Sum_probs=205.9
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.+.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 45778899999999999999954 5888999998754322 2456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||+++++|.+++.. ...+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 171 (294)
T 2rku_A 95 ELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 171 (294)
T ss_dssp ECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCccc
Confidence 99999999998863 456999999999999999999999999 999999999999999999999999999865422
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....+|+.|+|||.+.+..++.++||||||+++|+|+||..||.......... ..... ....+...+..+.++
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~l 245 (294)
T 2rku_A 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----RIKKN--EYSIPKHINPVAASL 245 (294)
T ss_dssp BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHTT--CCCCCTTSCHHHHHH
T ss_pred cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHhhc--cCCCccccCHHHHHH
Confidence 24568999999999998889999999999999999999999886543221111 01011 112344556789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+||+.||++|||+.+++++-
T Consensus 246 i~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 246 IQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp HHHHTCSSGGGSCCGGGGGGSH
T ss_pred HHHHcccChhhCcCHHHHhhCh
Confidence 9999999999999999999874
No 208
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9.3e-44 Score=366.50 Aligned_cols=246 Identities=17% Similarity=0.141 Sum_probs=200.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-------------CChHHHHHHHHHHhhcCCCCCcccccce
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-------------PDSRQFLEEARAVGLLRSERLVNLIGCC 119 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~~~ 119 (488)
..|.++++||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+|++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 3578899999999999999995 4688999999975432 2246789999999999999999999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeecc
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSC 196 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~D 196 (488)
.+....++||||++||+|.+.+.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999998863 456999999999999999999999999 99999999999998776 689999
Q ss_pred CCCcccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC
Q 011349 197 FGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 197 fgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
||+++..... ....||+.|+|||++. +.++.++|||||||++|+|++|.+||............ ........
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i----~~~~~~~~ 267 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV----EKGKYYFD 267 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHCCCCCC
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HcCCCCCC
Confidence 9999876543 3457899999999987 56899999999999999999999998765332211110 00000000
Q ss_pred --CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 274 --FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 274 --~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.....++++.+|+.+||..||.+|||+.++++|-
T Consensus 268 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 268 FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 0023467899999999999999999999999873
No 209
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.1e-43 Score=348.91 Aligned_cols=251 Identities=18% Similarity=0.207 Sum_probs=203.8
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC-----------------hHHHHHHHHHHhhcCCCCCcccc
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD-----------------SRQFLEEARAVGLLRSERLVNLI 116 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~~~ 116 (488)
+.|.+++.||+|+||.||+|.. +++.||||++....... .+.+.+|+.++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5678899999999999999999 99999999987432111 17899999999999999999999
Q ss_pred cceecCCeeeEEEecCCCCChhhh------hccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCC
Q 011349 117 GCCCEGEERLLVAEFMPNETLSKH------LFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~ 189 (488)
+++.+.+..++||||+++++|.++ +.......+++..++.++.||+.||.|||+ .+ ++||||||+||+++.+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKN 188 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTT
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCC
Confidence 999999999999999999999998 654336789999999999999999999999 88 9999999999999999
Q ss_pred CCCeeccCCCcccCCCC--CccccccCCCCccccccC-Cccc-CCceEeehHHHHHHhhCCCCCCcchh-hh----hhcc
Q 011349 190 GNPRLSCFGLMKNSRDG--KSYSTNLAFTPPEYLRTG-RVIP-ESVVYSFGTLLLDLLSGKHIPPSHAL-DL----IRGK 260 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~sDv~slG~il~el~tg~~p~~~~~~-~~----~~~~ 260 (488)
+.+||+|||++...... ....+|+.|+|||.+.+. .++. ++|||||||++|||++|..||..... .. ....
T Consensus 189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~ 268 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268 (348)
T ss_dssp SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC
T ss_pred CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc
Confidence 99999999999865432 345789999999999886 6666 99999999999999999998865422 11 1011
Q ss_pred ccccccc------c---ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 NFLMLMD------S---CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 ~~~~~~~------~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....... . ..........+..+.+|+.+||+.||.+|||+.++++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 269 NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000000 0 00000113456889999999999999999999999986
No 210
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.5e-43 Score=349.96 Aligned_cols=245 Identities=20% Similarity=0.202 Sum_probs=200.9
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC--------hHHHHHHHHHHhhc-CCCCCcccccceecCCe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD--------SRQFLEEARAVGLL-RSERLVNLIGCCCEGEE 124 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 124 (488)
.|.+.+.||+|+||.||+|... +|+.||||++....... .+.+.+|+.+++++ +||||+++++++...+.
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence 4677888999999999999964 79999999987654211 34678999999999 79999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||++|++|.+++.. ...+++..+..++.||+.||.|||+.| ++||||||+|||++.++.+||+|||++....
T Consensus 175 ~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 9999999999999999973 456999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC---CccccccCCCCcccccc------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC-
Q 011349 205 DG---KSYSTNLAFTPPEYLRT------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF- 274 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 274 (488)
.. ....||+.|+|||++.+ ..++.++|||||||++|+|+||..||........... +.........
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~----i~~~~~~~~~~ 327 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM----IMEGQYQFSSP 327 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHTCCCCCHH
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhCCCCCCCc
Confidence 43 34578999999999864 3588899999999999999999998865422111100 0000000000
Q ss_pred -ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 -SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 -~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+..+.+++.+||+.||++|||+.++++|
T Consensus 328 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 328 EWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01235679999999999999999999999986
No 211
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.1e-43 Score=338.10 Aligned_cols=252 Identities=20% Similarity=0.250 Sum_probs=201.6
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
++.+.+++.||+|+||.||+|... +|+.||||+++.... .....+.+|+.++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 456788999999999999999954 689999999975432 22467899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||+. ++|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 9997 69999997655567999999999999999999999999 99999999999999999999999999875432
Q ss_pred CCccccccCCCCccccccCC-cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc-------ccccc-----ccCC
Q 011349 206 GKSYSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------MLMDS-----CLEG 272 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------~~~~~-----~~~~ 272 (488)
.....+|+.|+|||.+.+.. ++.++|||||||++|+|+||+.||.............. ..... ....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccch
Confidence 23446799999999998755 78999999999999999999998876432111000000 00000 0000
Q ss_pred CC-----------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 273 HF-----------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 273 ~~-----------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+ ....+.++.+++.+||+.||++|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 12346789999999999999999999999986
No 212
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.6e-44 Score=355.53 Aligned_cols=247 Identities=18% Similarity=0.222 Sum_probs=196.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC----------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG---------- 122 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---------- 122 (488)
..|.+++.||+|+||.||+|.. .+|+.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 3568889999999999999994 679999999987543 2334799999999999999999998543
Q ss_pred ----------------------------CeeeEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 011349 123 ----------------------------EERLLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKG 172 (488)
Q Consensus 123 ----------------------------~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 172 (488)
...++||||++ |+|.+.+.. ..+..+++..+..++.||+.||.|||+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 161 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG 161 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 34889999998 588777753 24567999999999999999999999999
Q ss_pred CcccccccCCceeec-CCCCCeeccCCCcccCCCC---CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCC
Q 011349 173 RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKH 247 (488)
Q Consensus 173 ~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~ 247 (488)
|+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||.+.+. .++.++|||||||++|||++|+.
T Consensus 162 -i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 162 -ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp -EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred -CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 99999999999997 6889999999999865433 345779999999998874 48999999999999999999999
Q ss_pred CCCcchhhhhhccc-----------------------cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHH
Q 011349 248 IPPSHALDLIRGKN-----------------------FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304 (488)
Q Consensus 248 p~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il 304 (488)
||.+.......... +.......+...++...++++.+|+.+||+.||.+|||+.+++
T Consensus 241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (383)
T 3eb0_A 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320 (383)
T ss_dssp SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 88764321110000 0000000111113344677899999999999999999999999
Q ss_pred HH
Q 011349 305 AS 306 (488)
Q Consensus 305 ~~ 306 (488)
+|
T Consensus 321 ~h 322 (383)
T 3eb0_A 321 AH 322 (383)
T ss_dssp TS
T ss_pred cC
Confidence 87
No 213
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.8e-43 Score=348.87 Aligned_cols=248 Identities=15% Similarity=0.182 Sum_probs=191.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCC------e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGE------E 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 124 (488)
..|.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 4578899999999999999994 46889999999764322 2356889999999999999999999987654 6
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||++ ++|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 899999997 57888874 34899999999999999999999999 9999999999999999999999999998665
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc------------------
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL------------------ 263 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~------------------ 263 (488)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+............
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 43 345789999999999998999999999999999999999998875432111000000
Q ss_pred ---------------cccccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 264 ---------------MLMDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 264 ---------------~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
........+. .+...+.++.+|+.+||..||.+|||+.++++|-
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 0000000000 0112367899999999999999999999999973
No 214
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1e-43 Score=339.87 Aligned_cols=248 Identities=18% Similarity=0.219 Sum_probs=188.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-h-HHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-S-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+.+.+++.||+|+||.||+|.. .+|+.||||+++...... . +.+..+...++.++||||+++++++.+++..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 4568899999999999999995 578999999997653222 2 234455556888899999999999999999999999
Q ss_pred cCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 131 FMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
|++ |+|.+++.. .....+++..++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 997 588777753 1456799999999999999999999998 8 9999999999999999999999999997654432
Q ss_pred ---ccccccCCCCcccc----ccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ---SYSTNLAFTPPEYL----RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~----~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...||+.|+|||.+ .+..++.++|||||||++|+|+||+.||......... .............+...++
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 241 (290)
T 3fme_A 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ---LKQVVEEPSPQLPADKFSA 241 (290)
T ss_dssp -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH---HHHHHHSCCCCCCTTTSCH
T ss_pred cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHH---HHHHhccCCCCcccccCCH
Confidence 34689999999996 4567899999999999999999999988643221111 1111111111122234568
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+++.+||+.||.+|||+.++++|
T Consensus 242 ~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 242 EFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 89999999999999999999999986
No 215
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.3e-43 Score=348.51 Aligned_cols=259 Identities=15% Similarity=0.197 Sum_probs=198.1
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC-----------hHHHHHHHHHHhhcCCC
Q 011349 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD-----------SRQFLEEARAVGLLRSE 110 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~ 110 (488)
...++....+.| .+++.||+|+||.||+|...+|+.||||++....... .+.+.+|+.++++++||
T Consensus 13 ~~~~~~~~~~~y---~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 89 (362)
T 3pg1_A 13 LIAELHAMQSPY---TVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89 (362)
T ss_dssp HHHHHHHTTCSC---EEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHhccce---EEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCc
Confidence 345566666555 7888899999999999998789999999986543221 26789999999999999
Q ss_pred CCcccccceec-----CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcee
Q 011349 111 RLVNLIGCCCE-----GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRIL 185 (488)
Q Consensus 111 niv~~~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nil 185 (488)
||+++++++.. ....++||||+. |+|.+.+.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||
T Consensus 90 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl 166 (362)
T 3pg1_A 90 NILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNIL 166 (362)
T ss_dssp TBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEE
T ss_pred CccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEE
Confidence 99999999854 346899999997 688888864 4457999999999999999999999999 999999999999
Q ss_pred ecCCCCCeeccCCCcccCCCC---CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc
Q 011349 186 FDQDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261 (488)
Q Consensus 186 l~~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~ 261 (488)
++.++.+||+|||+++..... ....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||............
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 246 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246 (362)
T ss_dssp ECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred EcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999999999999754332 34567899999999877 67899999999999999999999988754221110000
Q ss_pred c-------------------ccccccccC-------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 F-------------------LMLMDSCLE-------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ~-------------------~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. ...+..... .......++.+.+|+.+||+.||.+|||+.++++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 000000000 01122345779999999999999999999999987
No 216
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.1e-43 Score=343.06 Aligned_cols=244 Identities=16% Similarity=0.176 Sum_probs=194.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--------CChHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--------PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
.|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++++++||||+++++++..+. .
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~ 89 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-Y 89 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-E
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-e
Confidence 467889999999999999995 4688999999975431 11235889999999999999999999986554 8
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC---CeeccCCCccc
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKN 202 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~ 202 (488)
++||||+++++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++.
T Consensus 90 ~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 99999999999999886 4567999999999999999999999999 999999999999986654 99999999987
Q ss_pred CCCCC---ccccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC---C
Q 011349 203 SRDGK---SYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG---H 273 (488)
Q Consensus 203 ~~~~~---~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~ 273 (488)
..... ...||+.|+|||++. +..++.++|||||||++|+|++|..||....... .....+...... .
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~ 242 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQITSGKYNFIPE 242 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS----CHHHHHHHTCCCCCHH
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH----HHHHHHHhCccccCch
Confidence 65442 346799999999974 4678899999999999999999999886432110 000000000000 0
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+..+.+++.+||..||.+|||+.++++|
T Consensus 243 ~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 112346789999999999999999999999976
No 217
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.8e-44 Score=358.35 Aligned_cols=247 Identities=23% Similarity=0.230 Sum_probs=193.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC------CeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~l 127 (488)
.|.+++.||+|+||.||+|.+ .+|+.||||++.... ..+.+|+++|+.++|||||++++++... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 467888999999999999996 469999999986543 2345799999999999999999988542 23679
Q ss_pred EEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCC
Q 011349 128 VAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSR 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 204 (488)
||||++ ++|.+.+.. .....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 999998 467666542 24567999999999999999999999999 9999999999999955 568999999998654
Q ss_pred CC---CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------cccc----
Q 011349 205 DG---KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FLML---- 265 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~~~---- 265 (488)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.......... +...
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 355789999999999764 7899999999999999999999998764321100000 0000
Q ss_pred ----ccc----ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 266 ----MDS----CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 266 ----~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+.. .+...++...++++.+|+.+||..||.+|||+.++++|-
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 000 000012334568899999999999999999999999873
No 218
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.2e-43 Score=337.92 Aligned_cols=251 Identities=18% Similarity=0.131 Sum_probs=204.6
Q ss_pred cCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---------ChHHHHHHHHHHhhcC-CCCCcccccce
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---------DSRQFLEEARAVGLLR-SERLVNLIGCC 119 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~-h~niv~~~~~~ 119 (488)
.-+..|.+++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3456778999999999999999995 46899999999765321 1346889999999996 99999999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
...+..++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999973 457999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC---CccccccCCCCccccc------cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc
Q 011349 200 MKNSRDG---KSYSTNLAFTPPEYLR------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 200 a~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
+...... ....+|+.|+|||.+. ...++.++||||||+++|+|++|..|+................. ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~ 248 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QF 248 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CC
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc--cc
Confidence 9865443 2456899999999985 35688899999999999999999998865432211110000000 01
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........+..+.+++.+||+.||.+|||+.++++|
T Consensus 249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 249 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 111123457889999999999999999999999986
No 219
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.4e-43 Score=357.77 Aligned_cols=255 Identities=15% Similarity=0.174 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC-CCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS-ERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||+|+||.||+|.. .+++.||||++.... ....+.+|+++++.++| ++|+.+..++...+..+|||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 3568899999999999999994 679999999987554 23468899999999976 5566666667778889999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCCC-
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~~- 207 (488)
+ +++|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||+ +.++.+||+|||+++......
T Consensus 85 ~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 8999999964 3457999999999999999999999999 9999999999999 688999999999998654322
Q ss_pred ----------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC---CCC
Q 011349 208 ----------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE---GHF 274 (488)
Q Consensus 208 ----------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~ 274 (488)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+..+...... ...
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~l 240 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVATSIEAL 240 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH-HHHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH-HHHHHHhhccccccHHHH
Confidence 457899999999999999999999999999999999999998653211000 000000000000 011
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...++.++.+|+.+||+.+|++||++.+|++.|+.+....
T Consensus 241 ~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 241 CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 1234678999999999999999999999999998875543
No 220
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.7e-43 Score=349.70 Aligned_cols=248 Identities=17% Similarity=0.220 Sum_probs=197.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecC-----CeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 127 (488)
.|.+++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++.+++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 568899999999999999994 468889999997543222 35789999999999999999999998654 36899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+. ++|.+++. ...+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 108 v~e~~~-~~L~~~l~---~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 108 VQDLME-TDLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EEECCS-EEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEcccC-cCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 999997 69999885 356999999999999999999999999 999999999999999999999999999865432
Q ss_pred ------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc-------c--------
Q 011349 207 ------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------M-------- 264 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------~-------- 264 (488)
....||+.|+|||++.+ ..++.++|||||||++|+|+||+.||.............. .
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 24478999999998765 4589999999999999999999998865422111000000 0
Q ss_pred ----cccccc-CCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 265 ----LMDSCL-EGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 265 ----~~~~~~-~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
...... ... .....++++.+|+.+||+.||.+|||+.++++|-
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 000000 000 1123467899999999999999999999999873
No 221
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.1e-43 Score=347.74 Aligned_cols=250 Identities=18% Similarity=0.221 Sum_probs=200.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHH-HhhcCCCCCcccccceecCCeeeEEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARA-VGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
...+.+++.||+|+||.||+|.. .+|+.||||+++..... ....+..|..+ ++.++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 34678889999999999999994 57999999999765422 23456666666 77789999999999999999999999
Q ss_pred ecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 130 EFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
||++| +|.+++... ....+++..++.++.||+.||.|||++ + |+||||||+|||++.++.+||+|||+++.....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 207 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeeCCCceecccc
Confidence 99974 998887632 456799999999999999999999997 8 999999999999999999999999998765432
Q ss_pred C---ccccccCCCCcccccc----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 207 K---SYSTNLAFTPPEYLRT----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 207 ~---~~~~t~~y~aPE~~~~----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
. ...||+.|+|||++.+ ..++.++|||||||++|||+||+.||......... +...+............+
T Consensus 208 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 284 (340)
T 3an0_A 208 VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ---LKQVVEEPSPQLPADKFS 284 (340)
T ss_dssp HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH---HHHHHHSCCCCCCGGGSC
T ss_pred cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHH---HHHHhcCCCCCCCcccCC
Confidence 2 2468999999999743 46889999999999999999999988643211110 111111111111223457
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.++.+++.+||..||++|||+.+++++-
T Consensus 285 ~~~~~li~~~l~~dp~~Rps~~ell~hp 312 (340)
T 3an0_A 285 AEFVDFTSQCLKKNSKERPTYPELMQHP 312 (340)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred HHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 8899999999999999999999999863
No 222
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.1e-43 Score=352.35 Aligned_cols=246 Identities=21% Similarity=0.241 Sum_probs=193.1
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC------eeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE------ERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv 128 (488)
.|.+++.||+|+||.||+|....+..||+|++.... ....+|+.+++.++||||+++++++...+ ..++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 578889999999999999998776679999886543 22347999999999999999999986543 37899
Q ss_pred EecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCcccCCC
Q 011349 129 AEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~ 205 (488)
|||++++ +...+.. .....+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++....
T Consensus 117 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 117 LEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp EECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 9999864 4443321 13567999999999999999999999999 99999999999999 799999999999986543
Q ss_pred C---CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc--------------------
Q 011349 206 G---KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------------------- 261 (488)
Q Consensus 206 ~---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-------------------- 261 (488)
. ....+|+.|+|||.+.+. .++.++|||||||++|||++|+.||.+..........
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~ 274 (394)
T 4e7w_A 195 GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274 (394)
T ss_dssp TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 2 356789999999999764 5899999999999999999999998765321110000
Q ss_pred ---cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 ---FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+...........++...++++.+|+.+||+.||.+|||+.++++|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000000000111233456789999999999999999999999997
No 223
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=9.7e-44 Score=355.53 Aligned_cols=250 Identities=16% Similarity=0.210 Sum_probs=200.9
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC--------CCCCccccccee----
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR--------SERLVNLIGCCC---- 120 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~---- 120 (488)
..|.+++.||+|+||.||+|. ..+++.||||+++... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 457899999999999999999 4568899999997542 23467899999999996 788999999987
Q ss_pred cCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCC---------
Q 011349 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDG--------- 190 (488)
Q Consensus 121 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~--------- 190 (488)
.....++||||+ +++|.+.+.......+++..++.++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhh
Confidence 556899999999 57777777654556799999999999999999999998 8 99999999999998775
Q ss_pred ----------------------------------------CCeeccCCCcccCCCC-CccccccCCCCccccccCCcccC
Q 011349 191 ----------------------------------------NPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPE 229 (488)
Q Consensus 191 ----------------------------------------~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~ 229 (488)
.+||+|||+++..... ....||+.|+|||++.+..++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcH
Confidence 8999999999865443 34578999999999999899999
Q ss_pred CceEeehHHHHHHhhCCCCCCcchhhhh-------------hcc---------ccc-cccc------cc-----------
Q 011349 230 SVVYSFGTLLLDLLSGKHIPPSHALDLI-------------RGK---------NFL-MLMD------SC----------- 269 (488)
Q Consensus 230 sDv~slG~il~el~tg~~p~~~~~~~~~-------------~~~---------~~~-~~~~------~~----------- 269 (488)
+|||||||++|||+||+.||........ ... ... .... ..
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence 9999999999999999998864321000 000 000 0000 00
Q ss_pred --cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 270 --LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 270 --~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+...+..+.+|+.+||+.||++|||+.++++|
T Consensus 354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0112355677889999999999999999999999986
No 224
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.9e-43 Score=342.04 Aligned_cols=250 Identities=16% Similarity=0.180 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCceEEEEEe--CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC------CcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV--DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER------LVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~ 125 (488)
+.|.+++.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+.+++.++|+| ++++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4678899999999999999985 368899999997532 23467889999999997765 89999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-----------------
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ----------------- 188 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~----------------- 188 (488)
++||||+ +++|.+++......++++..+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 799999997655567999999999999999999999999 999999999999987
Q ss_pred --CCCCeeccCCCcccCCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc----
Q 011349 189 --DGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN---- 261 (488)
Q Consensus 189 --~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~---- 261 (488)
++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||..||............
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 250 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 678999999999865443 3567899999999999989999999999999999999999998754221110000
Q ss_pred --c-ccc------------------------------ccc-ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 --F-LML------------------------------MDS-CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 --~-~~~------------------------------~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. ... ... ......+...++.+.+|+.+||+.||.+|||+.++++|
T Consensus 251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 0 000 000 00011233457889999999999999999999999987
No 225
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.6e-43 Score=337.25 Aligned_cols=245 Identities=20% Similarity=0.253 Sum_probs=193.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec------------
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE------------ 121 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------ 121 (488)
.|.+++.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 357888999999999999995 578999999996432 234678999999999999999999998754
Q ss_pred -CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 122 -GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 122 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
....++||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcch
Confidence 3568999999999999999974 3456889999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC------------------CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc
Q 011349 201 KNSRDG------------------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261 (488)
Q Consensus 201 ~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~ 261 (488)
...... ....||+.|+|||.+.+. .++.++|||||||++|||++ |+............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~ 240 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHh
Confidence 865421 234578999999999864 68999999999999999998 33322111000000
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+. .........++...+..+.+++.+||+.||.+|||+.+++++
T Consensus 241 ~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 241 LR-SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HH-STTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cc-ccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 00 011122334455667889999999999999999999999987
No 226
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3e-43 Score=343.86 Aligned_cols=249 Identities=14% Similarity=0.123 Sum_probs=174.7
Q ss_pred cccccc-cCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeEE
Q 011349 55 ADNIVS-EHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLLV 128 (488)
Q Consensus 55 ~~~~~~-~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 128 (488)
.|.+++ .||+|+||.||+|... +|+.||||++... ..........++.+.||||+++++++.. ....++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 346655 4899999999999954 6999999999643 2222233334566689999999999876 4458999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCCC
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~ 205 (488)
|||++||+|.+++.......+++.+++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 99999999999998655567999999999999999999999999 999999999999975 45699999999986543
Q ss_pred C--CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc--ccCCCCChhhHHH
Q 011349 206 G--KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS--CLEGHFSNDDGTE 281 (488)
Q Consensus 206 ~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 281 (488)
. ....+|+.|+|||++.+..++.++|||||||++|+|++|..||................... ..........+.+
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 263 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence 3 34567999999999988889999999999999999999999886543322211111111111 1111122345788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+.+|+.+||+.||.+|||+.++++|-.
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 264 AKQLIRLLLKTDPTERLTITQFMNHPW 290 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 999999999999999999999999743
No 227
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=7.8e-43 Score=339.84 Aligned_cols=253 Identities=18% Similarity=0.206 Sum_probs=182.0
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHH-HHhhcCCCCCcccccceecCCeeeEEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEAR-AVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
...+.+++.||+|+||.||+|.. .+|+.||||+++..... ....+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 35667889999999999999995 46899999999765422 2345666666 677789999999999999999999999
Q ss_pred ecCCCCChhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 130 EFMPNETLSKHLFH---WENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
||++ ++|.+++.. .....+++..+..++.|++.||.|||+. + ++||||||+||+++.++.+||+|||+++....
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9998 588777752 2356799999999999999999999998 8 99999999999999999999999999986644
Q ss_pred CC---ccccccCCCCcccc----ccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 206 GK---SYSTNLAFTPPEYL----RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 206 ~~---~~~~t~~y~aPE~~----~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
.. ...||+.|+|||.+ .+..++.++|||||||++|+|++|+.||.............................
T Consensus 179 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3aln_A 179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREF 258 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCC
T ss_pred ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccC
Confidence 32 33689999999998 456789999999999999999999998865321111011111101111111222345
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+.+|+.+||..||.+|||+.+++++-
T Consensus 259 ~~~l~~li~~~l~~dp~~Rps~~ell~hp 287 (327)
T 3aln_A 259 SPSFINFVNLCLTKDESKRPKYKELLKHP 287 (327)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHHhCh
Confidence 78899999999999999999999999863
No 228
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-43 Score=340.94 Aligned_cols=248 Identities=16% Similarity=0.195 Sum_probs=192.5
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccccccee------------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC------------ 120 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~------------ 120 (488)
+.|.+++.||+|+||.||+|... +++.||||++........+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 45788999999999999999954 58999999998665444567999999999999999999998763
Q ss_pred --cCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccC
Q 011349 121 --EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCF 197 (488)
Q Consensus 121 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Df 197 (488)
.....++||||++ |+|.+++. ..++++..+..++.||+.||.|||+.+ |+||||||+||+++ +++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccC
Confidence 3467899999997 69999984 467999999999999999999999999 99999999999997 5679999999
Q ss_pred CCcccCCCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc------
Q 011349 198 GLMKNSRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL------ 263 (488)
Q Consensus 198 gla~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~------ 263 (488)
|+++..... ....+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||..............
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 999865422 23456889999998865 6789999999999999999999998865432111000000
Q ss_pred -----c---c----cccccC-C-----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 -----M---L----MDSCLE-G-----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 -----~---~----~~~~~~-~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. . +..... . ......+.++.+++.+||+.||.+|||+.++++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0 0 000000 0 0112356789999999999999999999999987
No 229
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.2e-42 Score=338.23 Aligned_cols=251 Identities=21% Similarity=0.235 Sum_probs=201.6
Q ss_pred CcccccccCCCCCCceEEEEEe--CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhc---CCCCCccccccee-----c
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV--DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLL---RSERLVNLIGCCC-----E 121 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~-----~ 121 (488)
..|.+++.||+|+||.||+|.. .+|+.||||+++.... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 3468889999999999999996 4688999999875332 2234677888888877 8999999999987 4
Q ss_pred CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 122 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
....++||||+. |+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 567899999997 69999997655566999999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------ccc---
Q 011349 202 NSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FLM--- 264 (488)
Q Consensus 202 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~~--- 264 (488)
..... ....+|+.|+|||.+.+..++.++|||||||++|+|+||+.||............ +..
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence 65432 3456799999999999889999999999999999999999988654321110000 000
Q ss_pred ----ccc---cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 ----LMD---SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 ----~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... ......+....+..+.+|+.+||..||.+|||+.++++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 000011223457889999999999999999999999986
No 230
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.5e-43 Score=369.34 Aligned_cols=252 Identities=21% Similarity=0.261 Sum_probs=205.7
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
..+.+.+.||+|+||.||+|.+.. +..||||+++...... .+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 346778889999999999998532 4579999987643222 357999999999999999999999984 5678999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999999964 3456999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
...+|+.|+|||.+.+..++.++|||||||++|||++ |..||.+....... ..+........+..+++.+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l 621 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-----GRIENGERLPMPPNCPPTL 621 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-----HHHHHTCCCCCCTTCCHHH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHH-----HHHHcCCCCCCCccccHHH
Confidence 2345678999999998899999999999999999997 88777654222111 1111112233455677899
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987643
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1e-42 Score=336.93 Aligned_cols=246 Identities=20% Similarity=0.269 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcC--CCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLR--SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.+++.||+|+||.||+|...+++.||||++...... ..+.+.+|+.++.+++ ||||+++++++...+..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 356888999999999999999888999999999765432 2457899999999997 599999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
|+ .+++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||+++ +.+||+|||+++.....
T Consensus 108 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp CC-CSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred ec-CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 94 57999999973 457999999999999999999999999 999999999999974 89999999999865432
Q ss_pred ---CccccccCCCCcccccc-----------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC
Q 011349 207 ---KSYSTNLAFTPPEYLRT-----------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~-----------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........ ............
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~ 259 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI 259 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCC
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---HHHHHHhccccc
Confidence 23467999999999875 4688899999999999999999998864321111 111222222233
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.++...+..+.+++.+||+.||.+|||+.+++++-
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 34445567899999999999999999999999874
No 232
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.4e-42 Score=343.96 Aligned_cols=246 Identities=15% Similarity=0.202 Sum_probs=195.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCee------
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEER------ 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------ 125 (488)
.|.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 567888999999999999994 568999999997654222 35788999999999999999999999876654
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||+. ++|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred EEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 99999997 68888773 34999999999999999999999999 99999999999999999999999999986654
Q ss_pred C-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc--------------------
Q 011349 206 G-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------------------- 263 (488)
Q Consensus 206 ~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------------------- 263 (488)
. ....+|+.|+|||.+.+ ..++.++|||||||++|+|+||+.||..............
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 276 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHH
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhh
Confidence 3 34578999999999987 6789999999999999999999999875422111000000
Q ss_pred --cccccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 --MLMDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 --~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+....... .....++.+.+|+.+||+.||.+|||+.++++|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000000 112346789999999999999999999999988
No 233
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=347.42 Aligned_cols=245 Identities=14% Similarity=0.203 Sum_probs=180.4
Q ss_pred ccCCCCCCceEEEEEeC---CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccccccee--cCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC--EGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~~ 134 (488)
++||+|+||.||+|.+. +++.||||++.... ....+.+|+.+|++++||||+++++++. .....++||||+.
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 46999999999999964 57889999997543 3457899999999999999999999995 4678999999997
Q ss_pred CChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee----cCCCCCeeccCCCcccC
Q 011349 135 ETLSKHLFHW-------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 135 gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 203 (488)
++|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 182 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence 6888877521 2235999999999999999999999999 9999999999999 67889999999999865
Q ss_pred CCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc---------------
Q 011349 204 RDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------------- 260 (488)
Q Consensus 204 ~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------------- 260 (488)
... ....||+.|+|||++.+ ..++.++|||||||++|||+||++||...........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g 262 (405)
T 3rgf_A 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262 (405)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHC
T ss_pred CCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhC
Confidence 432 24578999999999987 4589999999999999999999998864322100000
Q ss_pred -----ccccc------------c-ccccCC--------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 261 -----NFLML------------M-DSCLEG--------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 261 -----~~~~~------------~-~~~~~~--------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+..+ + ...... ......+..+.+|+.+||..||.+|||+.++++|-.
T Consensus 263 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~ 336 (405)
T 3rgf_A 263 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 336 (405)
T ss_dssp CCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred CCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 00000 0 000000 000011467889999999999999999999999843
No 234
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=9.9e-43 Score=345.37 Aligned_cols=251 Identities=16% Similarity=0.206 Sum_probs=201.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-----------CCCCcccccceec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-----------SERLVNLIGCCCE 121 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~~ 121 (488)
..|.+++.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 4578899999999999999994 578999999997533 23467889999999886 8999999999876
Q ss_pred CC----eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeec------CCC
Q 011349 122 GE----ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFD------QDG 190 (488)
Q Consensus 122 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~------~~~ 190 (488)
.+ ..++||||+ +++|.+++.......+++..+..++.||+.||.|||++ + |+||||||+|||++ ..+
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcc
Confidence 54 789999999 89999999765566799999999999999999999998 8 99999999999994 445
Q ss_pred CCeeccCCCcccCCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----cc---
Q 011349 191 NPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----KN--- 261 (488)
Q Consensus 191 ~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-----~~--- 261 (488)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||..||.......... ..
T Consensus 176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255 (373)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence 7999999999866543 35578999999999999899999999999999999999999886432110000 00
Q ss_pred ------------------------ccccccc----------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 262 ------------------------FLMLMDS----------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 262 ------------------------~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
....+.. .....++...+.++.+|+.+||+.||.+|||+.++++|-
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 335 (373)
T 1q8y_A 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP 335 (373)
T ss_dssp HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhCh
Confidence 0000000 001234567788999999999999999999999999973
No 235
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.7e-42 Score=342.02 Aligned_cols=250 Identities=18% Similarity=0.191 Sum_probs=186.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCe-------e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE-------R 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-------~ 125 (488)
+.|.+++.||+|+||.||+|.. .+|+.||||++.... .....+.++++.+..++||||+++++++...+. .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence 3458888999999999999995 568999999986543 334567788999999999999999999865433 7
Q ss_pred eEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcccccccCCceeecC-CCCCeeccCCCc
Q 011349 126 LLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCS--SKGRALYHDLNTYRILFDQ-DGNPRLSCFGLM 200 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla 200 (488)
++||||+++ +|...+.. .....+++..+..++.||+.||.||| +.+ |+||||||+|||++. ++.+||+|||++
T Consensus 102 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a 179 (360)
T 3e3p_A 102 NVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSA 179 (360)
T ss_dssp EEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence 899999985 55544432 24567999999999999999999999 888 999999999999996 899999999999
Q ss_pred ccCCCC---CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc-------cc---c
Q 011349 201 KNSRDG---KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------ML---M 266 (488)
Q Consensus 201 ~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------~~---~ 266 (488)
+..... ....||+.|+|||++.+. .++.++|||||||++|||+||+.||.............. .. +
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 180 KKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp BCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred eecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhc
Confidence 876543 245679999999998764 489999999999999999999998875432211100000 00 0
Q ss_pred -------c---------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 -------D---------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 -------~---------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+ .......+...++++.+|+.+||+.||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 000111223357889999999999999999999999987
No 236
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.9e-42 Score=340.75 Aligned_cols=248 Identities=17% Similarity=0.208 Sum_probs=197.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecC-----Ceee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 126 (488)
+.+.+++.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.++++++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 3568889999999999999995 46899999999754322 234688999999999999999999987654 6789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+. ++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9999997 699998853 56999999999999999999999999 999999999999999999999999999865421
Q ss_pred --------------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------
Q 011349 207 --------------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK----------- 260 (488)
Q Consensus 207 --------------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~----------- 260 (488)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 12467899999998765 6789999999999999999999998876432110000
Q ss_pred -cc--------cccccccc---CC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 -NF--------LMLMDSCL---EG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 -~~--------~~~~~~~~---~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ...+.... .. ......++++.+|+.+||+.||++|||+.++++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 00000000 00 0112456789999999999999999999999987
No 237
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.5e-42 Score=337.47 Aligned_cols=247 Identities=15% Similarity=0.207 Sum_probs=196.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCe------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEE------ 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 124 (488)
..|.+.+.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 3567888899999999999995 568999999997654222 3578899999999999999999999977654
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+. ++|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 68988873 34999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc---------------------
Q 011349 205 DG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------------------- 261 (488)
Q Consensus 205 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------------------- 261 (488)
.. ....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||............
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 43 34578999999999887 67899999999999999999999988654221100000
Q ss_pred -cccccccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 -FLMLMDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 -~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+..... .......++.+.+|+.+||..||.+|||+.++++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000001 11223557889999999999999999999999987
No 238
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.3e-42 Score=331.93 Aligned_cols=244 Identities=18% Similarity=0.183 Sum_probs=200.9
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 23 ~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 102 (287)
T 2wei_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (287)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEc
Confidence 4688899999999999999954 68999999986543 23467899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeeccCCCcccCCCCC-
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~~- 207 (488)
+++++|.+.+.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.+ +.+||+|||++.......
T Consensus 103 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 999999998863 356999999999999999999999999 9999999999999754 479999999988655432
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC--ChhhHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF--SNDDGTELV 283 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 283 (488)
...+|+.|+|||.+.+ .++.++||||||+++|+|++|..||........... +......... ....+.++.
T Consensus 180 ~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 254 (287)
T 2wei_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR----VETGKYAFDLPQWRTISDDAK 254 (287)
T ss_dssp CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCCCCCSGGGTTSCHHHH
T ss_pred cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcCCCCCCchhhhhcCHHHH
Confidence 3457899999999875 589999999999999999999998865432221110 0000000011 123467899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||..||.+|||+.+++++
T Consensus 255 ~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 255 DLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHcccChhhCcCHHHHhcC
Confidence 99999999999999999999986
No 239
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.1e-42 Score=342.84 Aligned_cols=196 Identities=19% Similarity=0.180 Sum_probs=169.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CC-----CCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SE-----RLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~~~ 126 (488)
+.|.+++.||+|+||.||+|.. .+++.||||+++... .....+.+|+.+++.++ |+ +|+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 4568889999999999999995 468899999997432 22456788999999885 55 3999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCcccccccCCceeec--CCCCCeeccCCCccc
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS--KGRALYHDLNTYRILFD--QDGNPRLSCFGLMKN 202 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~ 202 (488)
+||||+. ++|.+++.......+++..+..++.||+.||.|||+ .+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 133 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 9999996 699999976555679999999999999999999995 56 99999999999994 578899999999987
Q ss_pred CCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcc
Q 011349 203 SRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH 252 (488)
Q Consensus 203 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~ 252 (488)
.... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6543 4567899999999999999999999999999999999999998754
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=9e-43 Score=338.27 Aligned_cols=240 Identities=20% Similarity=0.295 Sum_probs=202.1
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcC--CCCCcccccceecC
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLR--SERLVNLIGCCCEG 122 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~ 122 (488)
-.+.|.+++.||+|+||.||+|. ..+++.||||++...... ....+.+|+.++++++ |+||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 34567899999999999999999 457899999999765322 2346788999999996 59999999999999
Q ss_pred CeeeEEEecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCc
Q 011349 123 EERLLVAEFMPN-ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLM 200 (488)
Q Consensus 123 ~~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla 200 (488)
+..++|||++.+ ++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ +++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999976 899999873 467999999999999999999999999 99999999999999 7899999999999
Q ss_pred ccCCCC--CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 201 KNSRDG--KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 201 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
+..... ....||+.|+|||++.+..+ +.++|||||||++|||+||+.||....... .. ...++..
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~-----------~~~~~~~ 265 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-RG-----------QVFFRQR 265 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH-HC-----------CCCCSSC
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh-cc-----------ccccccc
Confidence 876543 34568999999999987665 788999999999999999998886542111 11 0112334
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.++++.+++.+||+.||.+|||+.+++++
T Consensus 266 ~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 266 VSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 56789999999999999999999999986
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=335.53 Aligned_cols=239 Identities=21% Similarity=0.288 Sum_probs=195.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhc----CCCCCcccccceecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLL----RSERLVNLIGCCCEG 122 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~~~~~~~~~ 122 (488)
+.|.+++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++.++ +||||+++++++...
T Consensus 31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 3468889999999999999984 57889999999765432 233567899999999 899999999999999
Q ss_pred CeeeEEEec-CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCc
Q 011349 123 EERLLVAEF-MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLM 200 (488)
Q Consensus 123 ~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla 200 (488)
+..++|||+ +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||++
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred CeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999999999 789999999974 456999999999999999999999999 99999999999999 8899999999999
Q ss_pred ccCCCC--CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 201 KNSRDG--KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 201 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
+..... ....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....++..
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------~~~~~~~~ 255 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE------------AELHFPAH 255 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH------------TCCCCCTT
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhh------------hccCCccc
Confidence 866543 34568999999999987665 4589999999999999999988765321110 01123345
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.+..+.+++.+||+.||++|||+.+++++-
T Consensus 256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~~ 285 (312)
T 2iwi_A 256 VSPDCCALIRRCLAPKPSSRPSLEEILLDP 285 (312)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHST
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 567899999999999999999999999874
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.4e-42 Score=338.11 Aligned_cols=250 Identities=16% Similarity=0.139 Sum_probs=200.0
Q ss_pred CcccccccCCCCCCceEEEEEeC-CC-cEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC------CcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-ED-RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER------LVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~ 125 (488)
..|.+++.||+|+||.||+|... ++ +.||||+++... ...+.+.+|+.+++.++|++ ++.+++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 35688999999999999999953 44 689999997532 23457889999999998766 88999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee-------------------
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF------------------- 186 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill------------------- 186 (488)
++||||+ +++|.+.+.......+++.++..++.||+.||.|||+.+ |+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 577777776545567999999999999999999999999 9999999999999
Q ss_pred cCCCCCeeccCCCcccCCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc--cc-
Q 011349 187 DQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--NF- 262 (488)
Q Consensus 187 ~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--~~- 262 (488)
+.++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||..||........... ..
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 56789999999999865443 356789999999999999999999999999999999999999865422110000 00
Q ss_pred cc----c------------------------------ccc-ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LM----L------------------------------MDS-CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~----~------------------------------~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. . ... ..........+.++.+|+.+||+.||++|||+.++++|
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 0 000 00001122346789999999999999999999999987
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.6e-42 Score=350.22 Aligned_cols=244 Identities=18% Similarity=0.112 Sum_probs=186.4
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.+.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +|||||++++++.+++..++||||+. |
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 344678999999998776678999999998653 245688999999987 89999999999999999999999996 6
Q ss_pred ChhhhhccCCCCC-----CCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-------------CCCeeccC
Q 011349 136 TLSKHLFHWENQP-----MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-------------GNPRLSCF 197 (488)
Q Consensus 136 sL~~~l~~~~~~~-----l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-------------~~~kl~Df 197 (488)
+|.+++....... .++..++.++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+||
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9999997432111 123346789999999999999999 9999999999999754 47999999
Q ss_pred CCcccCCCCC--------ccccccCCCCcccccc-------CCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccc
Q 011349 198 GLMKNSRDGK--------SYSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKN 261 (488)
Q Consensus 198 gla~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~ 261 (488)
|+++...... ...||+.|+|||++.+ ..++.++|||||||++|||+| |..||......... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~--i 250 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN--I 250 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH--H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH--H
Confidence 9998765432 3468999999999975 568999999999999999999 88777543221110 0
Q ss_pred cccccc-cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 262 FLMLMD-SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 262 ~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
...... ...........+.++.+++.+||+.||.+|||+.++++|-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 251 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp HHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred hcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 000000 0111122345678999999999999999999999999863
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=6e-42 Score=356.12 Aligned_cols=251 Identities=17% Similarity=0.171 Sum_probs=197.4
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceec------CCe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCE------GEE 124 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~ 124 (488)
++.|.+++.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|+.++++++||||+++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 45678999999999999999995 5689999999976432 224578999999999999999999998765 667
Q ss_pred eeEEEecCCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC---CeeccCCCc
Q 011349 125 RLLVAEFMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLM 200 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla 200 (488)
.++||||++||+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 899999999999999997532 236999999999999999999999999 999999999999997665 899999999
Q ss_pred ccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh--------------ccccc
Q 011349 201 KNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR--------------GKNFL 263 (488)
Q Consensus 201 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~--------------~~~~~ 263 (488)
...... ....||+.|+|||.+.+..++.++|||||||++|+|+||..||........- .....
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 251 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLT 251 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCS
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhc
Confidence 876543 3457899999999999999999999999999999999999988653111100 00000
Q ss_pred cc--ccc--ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHH
Q 011349 264 ML--MDS--CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304 (488)
Q Consensus 264 ~~--~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il 304 (488)
.. ... ......+...++.+.+++.+||..||++|||+.+++
T Consensus 252 g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 252 GAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp SSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred cccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 00 000 112234556789999999999999999999998743
No 245
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=329.43 Aligned_cols=250 Identities=19% Similarity=0.232 Sum_probs=181.9
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-h-HHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-S-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.++.+.+++.||+|+||.||+|.. .+|+.||||++....... . +.+..+..+++.++||||+++++++..++..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 345678889999999999999995 468999999997654222 2 2344555567888999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
|||+ ++.+..+... ....+++..+..++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++......
T Consensus 103 ~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 103 MELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp ECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred Eecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 9999 5566555432 356799999999999999999999995 8 999999999999999999999999999765432
Q ss_pred --CccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 207 --KSYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
....+|+.|+|||.+. +..++.++|||||||++|||++|+.||.................... .......+
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 257 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL--LPGHMGFS 257 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC--CCSSSCCC
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC--CCccCCCC
Confidence 2446899999999994 45688899999999999999999988865321110000000000000 01112356
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.++.+++.+||+.||.+|||+.+++++
T Consensus 258 ~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 258 GDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 789999999999999999999999986
No 246
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=342.04 Aligned_cols=243 Identities=16% Similarity=0.107 Sum_probs=186.2
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.+.||+|+||+||.....+++.||||++.... ...+.+|+.+|+.+ +|||||++++++.+....++||||+.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 356677889999999765556688999999997543 34467899999999 79999999999999999999999996
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---C--CCCeeccCCCcccCCCC--
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---D--GNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~--~~~kl~Dfgla~~~~~~-- 206 (488)
|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. + ..+||+|||+++.....
T Consensus 102 -g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 102 -ATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp -EEHHHHHHS-SSCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred -CCHHHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 699999975 3334566677899999999999999999 999999999999943 2 35779999999865432
Q ss_pred -----CccccccCCCCccccc---cCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 207 -----KSYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
....||+.|+|||++. +..++.++|||||||++|||+| |..||........... ... .. .........
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~-~~~-~~-~~~~~~~~~ 255 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL-LGA-CS-LDCLHPEKH 255 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH-TTC-CC-CTTSCTTCH
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH-hcc-CC-ccccCcccc
Confidence 2356899999999997 3567889999999999999999 7766643322111100 000 00 000111234
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+..+.+|+.+||+.||.+|||+.++++|
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 56778999999999999999999999976
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.9e-41 Score=320.36 Aligned_cols=231 Identities=16% Similarity=0.131 Sum_probs=185.4
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.+++.||+|+||.||+|... +++.||||++....... .+.+.+|+.++.+++||||+++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 34788899999999999999954 58999999998765433 257899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY 209 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~ 209 (488)
||++|++|.+++. .+ ....++..|+.||+.||.|||++| |+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~---~~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVAD---TS-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHT---TC-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHh---cC-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 9999999999994 23 456678999999999999999999 9999999999999999999998554
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC--CCCChhhHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE--GHFSNDDGTELVRLAS 287 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~ 287 (488)
|++ .++.++|||||||++|||+||+.||.......... ........... ......+++++.+++.
T Consensus 175 -----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 241 (286)
T 3uqc_A 175 -----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-PAERDTAGQPIEPADIDRDIPFQISAVAA 241 (286)
T ss_dssp -----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-ECCBCTTSCBCCHHHHCTTSCHHHHHHHH
T ss_pred -----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-HHHHHhccCCCChhhcccCCCHHHHHHHH
Confidence 333 36889999999999999999999887542211000 00000000000 0122345688999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+||+.||.+| |+.++++.|+.+....
T Consensus 242 ~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 242 RSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HHcccCCccC-CHHHHHHHHHHHhccC
Confidence 9999999999 9999999999887654
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.3e-40 Score=319.98 Aligned_cols=228 Identities=15% Similarity=0.131 Sum_probs=182.3
Q ss_pred ccccc-ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHH-hhcCCCCCcccccceec----CCeeeE
Q 011349 55 ADNIV-SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAV-GLLRSERLVNLIGCCCE----GEERLL 127 (488)
Q Consensus 55 ~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~~~~l 127 (488)
.|.++ +.||+|+||.||+|.. .+++.||||+++. ...+.+|+.++ +.++||||+++++++.. ....++
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 34566 5699999999999995 5789999999863 35688999998 44589999999999876 677899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSR 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~ 204 (488)
||||++||+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 999999999999998655567999999999999999999999999 999999999999997 7899999999986432
Q ss_pred CCCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC----hhhHH
Q 011349 205 DGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS----NDDGT 280 (488)
Q Consensus 205 ~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 280 (488)
+..++.++|||||||++|||+||..||.................... ...+ ...++
T Consensus 172 ------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (299)
T 3m2w_A 172 ------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEWSEVSE 231 (299)
T ss_dssp ------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTC--CSSCHHHHTTSCH
T ss_pred ------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcc--ccCCchhcccCCH
Confidence 24578899999999999999999998865432221111111111110 1112 23568
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
++.+++.+||+.||.+|||+.++++|-.
T Consensus 232 ~~~~li~~~l~~dP~~Rps~~e~l~hp~ 259 (299)
T 3m2w_A 232 EVKMLIRNLLKTEPTQRMTITEFMNHPW 259 (299)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHHHHHHcccChhhCCCHHHHhcChh
Confidence 8999999999999999999999998743
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.3e-41 Score=328.12 Aligned_cols=241 Identities=12% Similarity=0.036 Sum_probs=186.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--------CChHHHHHHHHHHhhcC-----------------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--------PDSRQFLEEARAVGLLR----------------- 108 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~----------------- 108 (488)
..|.+++.||+|+||.||+|+. +|+.||||++..... ...+.+.+|+.+++.++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 3467889999999999999997 789999999986532 22377899999999986
Q ss_pred ---------CCCCcccccceec-------------CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 011349 109 ---------SERLVNLIGCCCE-------------GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALD 166 (488)
Q Consensus 109 ---------h~niv~~~~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ 166 (488)
||||+++++++.+ .+..++||||+++|++.+.+. ...+++..+..|+.||+.||.
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHHH
Confidence 5555555555554 678999999999998777773 356899999999999999999
Q ss_pred HHH-hCCCcccccccCCceeecCCC--------------------CCeeccCCCcccCCCCCccccccCCCCccccccCC
Q 011349 167 YCS-SKGRALYHDLNTYRILFDQDG--------------------NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGR 225 (488)
Q Consensus 167 ~LH-~~~~iiH~Dlkp~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~~~ 225 (488)
||| +.+ |+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+..
T Consensus 176 ~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~~ 253 (336)
T 2vuw_A 176 VAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGDG 253 (336)
T ss_dssp HHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCCS
T ss_pred HHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCCC
Confidence 999 899 99999999999999887 8999999999876543 458899999999998766
Q ss_pred cccCCceEeehHH-HHHHhhCCCCCCcchhhhhhccccc-c-ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHH
Q 011349 226 VIPESVVYSFGTL-LLDLLSGKHIPPSHALDLIRGKNFL-M-LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKS 302 (488)
Q Consensus 226 ~~~~sDv~slG~i-l~el~tg~~p~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ 302 (488)
+.++||||||++ .+++++|..|+....+......... . ..............++++.+|+.+||+.| |+.+
T Consensus 254 -~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e 327 (336)
T 2vuw_A 254 -DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATD 327 (336)
T ss_dssp -SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHH
T ss_pred -ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHH
Confidence 889999998777 7778889887654211000000000 0 00111111123357889999999999976 9999
Q ss_pred HH-HH
Q 011349 303 LV-AS 306 (488)
Q Consensus 303 il-~~ 306 (488)
++ +|
T Consensus 328 ~l~~H 332 (336)
T 2vuw_A 328 LLCQH 332 (336)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 98 65
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-40 Score=331.30 Aligned_cols=238 Identities=15% Similarity=0.103 Sum_probs=182.6
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCC-CCCcccccc------------
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRS-ERLVNLIGC------------ 118 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h-~niv~~~~~------------ 118 (488)
+.+.+.||+|+||.||+|. ..+|+.||||+++..... ..+.+.+|+.+++.++| +|...+..+
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 4456779999999999999 557999999999844322 25689999999999987 332222111
Q ss_pred ---------eec-----CCeeeEEEecCCCCChhhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc
Q 011349 119 ---------CCE-----GEERLLVAEFMPNETLSKHLF-----HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179 (488)
Q Consensus 119 ---------~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dl 179 (488)
+.. ....+++|+++ +++|.+++. ......+++..++.++.||+.||.|||+++ |+||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDi 237 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYL 237 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCC
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCc
Confidence 111 12357778877 589999884 223456889999999999999999999999 999999
Q ss_pred cCCceeecCCCCCeeccCCCcccCCCC-CccccccCCCCcccc----------ccCCcccCCceEeehHHHHHHhhCCCC
Q 011349 180 NTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYL----------RTGRVIPESVVYSFGTLLLDLLSGKHI 248 (488)
Q Consensus 180 kp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~sDv~slG~il~el~tg~~p 248 (488)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998865443 34466 999999999 555688899999999999999999998
Q ss_pred CCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 249 PPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
|....... .....+.. ....++.+.+|+.+||+.||++|||+.+++++
T Consensus 317 f~~~~~~~----~~~~~~~~------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 317 NTDDAALG----GSEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp CCTTGGGS----CSGGGGSS------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCcchhh----hHHHHHhh------cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 86542211 11111111 11345789999999999999999998888665
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=100.00 E-value=2.4e-34 Score=298.50 Aligned_cols=180 Identities=13% Similarity=0.048 Sum_probs=130.7
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC----------ChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEE
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP----------DSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 128 (488)
..+.|++|.+..++ +..|+.||||++...... +.++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45677777777766 557889999999765321 134699999999999 699999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||++|++|.++|. .+++++.. .|+.||+.||.|+|++| ||||||||+|||++.+|++||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 99999999999997 45667765 47899999999999999 9999999999999999999999999998765432
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCC
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH 247 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~ 247 (488)
+..||+.|||||++.+ .+..++|+||+|++++++.++..
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 4578999999999975 56778999999999888776643
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.95 E-value=9.2e-29 Score=255.20 Aligned_cols=175 Identities=13% Similarity=0.097 Sum_probs=143.4
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--------hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--------SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.||+|+||.||+|.. .+..+++|+........ .+.+.+|++++++++||||+++..++...+..++||||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~ 420 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY 420 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence 4679999999999954 57779999875533221 23489999999999999999776666677888999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
++|++|.+++.. +..++.||+.||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 999999999952 5689999999999999999 999999999999998 9999999999987653
Q ss_pred ------CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCC
Q 011349 207 ------KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHI 248 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p 248 (488)
....||+.|||||++.+ ..|+..+|+|+..+-..+.+.++.+
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 24578999999999987 5688889999999888887776644
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.92 E-value=2.8e-26 Score=217.35 Aligned_cols=155 Identities=16% Similarity=0.087 Sum_probs=123.8
Q ss_pred HHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC------------------ChHHHHHHHHHHhh
Q 011349 45 QLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP------------------DSRQFLEEARAVGL 106 (488)
Q Consensus 45 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~ 106 (488)
.+....+.-..+.+.+.||+|+||.||+|...+|+.||||+++..... ....+.+|+.+|++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 344444555556677899999999999999977999999999754321 23468999999999
Q ss_pred cCCCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee
Q 011349 107 LRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186 (488)
Q Consensus 107 l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill 186 (488)
++ | +++.+++. .+..++||||++|++|.+ +. . .....++.||+.||.|||+.+ |+||||||+|||+
T Consensus 161 l~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl 226 (282)
T 1zar_A 161 LQ--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLV 226 (282)
T ss_dssp TT--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEE
T ss_pred cc--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEE
Confidence 99 5 77777553 466799999999999998 52 1 234579999999999999999 9999999999999
Q ss_pred cCCCCCeeccCCCcccCCCCCccccccCCCCcccccc
Q 011349 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRT 223 (488)
Q Consensus 187 ~~~~~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~ 223 (488)
+ ++.+||+|||+++. +..++|||++..
T Consensus 227 ~-~~~vkl~DFG~a~~---------~~~~~a~e~l~r 253 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE---------VGEEGWREILER 253 (282)
T ss_dssp E-TTEEEECCCTTCEE---------TTSTTHHHHHHH
T ss_pred E-CCcEEEEECCCCeE---------CCCCCHHHHHHH
Confidence 9 99999999999863 345788998753
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.86 E-value=5.4e-22 Score=185.55 Aligned_cols=149 Identities=13% Similarity=0.022 Sum_probs=113.9
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcE--EEEEEccCCCCCC------------------------hH
Q 011349 43 LDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRW--IAVKRFNRSAWPD------------------------SR 95 (488)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~~ 95 (488)
...+....+.-..+.+.+.||+|+||.||+|.. .+|+. ||||+++...... ..
T Consensus 36 ~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 1zth_A 36 LKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFI 115 (258)
T ss_dssp HHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHH
T ss_pred HHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHH
Confidence 334444444444567888999999999999996 78999 9999976542110 12
Q ss_pred HHHHHHHHHhhcCCCCC--cccccceecCCeeeEEEecCCC-C----ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 011349 96 QFLEEARAVGLLRSERL--VNLIGCCCEGEERLLVAEFMPN-E----TLSKHLFHWENQPMKWAMRVRVALYLAQALDYC 168 (488)
Q Consensus 96 ~~~~E~~~l~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~L 168 (488)
.+.+|+.+|.++.|+++ +.++++ ...+|||||+.+ | +|.+.... .++..+..++.||+.||.||
T Consensus 116 ~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 116 WTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHH
Confidence 58899999999998864 344432 357899999942 3 66665431 33557789999999999999
Q ss_pred H-hCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 169 S-SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 169 H-~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
| +.+ |+||||||+|||++. .++|+|||++...
T Consensus 187 H~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9 888 999999999999998 9999999999765
No 255
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.85 E-value=5.3e-21 Score=158.25 Aligned_cols=105 Identities=19% Similarity=0.335 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+.+.+++++|+.+++.|+|++|++.|++||+++|+ ++.+|.++|.+|.++|++++|+.+|++||+++|+++.+|+++|.
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 56889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|+++|++|++++|++.
T Consensus 90 ~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 90 CLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 99999999999999999999999864
No 256
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.83 E-value=1.8e-20 Score=158.21 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC------c-----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV------S-----PTVFARRCLCYLLSDMPQEALGDAMQAQVI- 447 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l- 447 (488)
+..+..++++|+.+++.|+|++|+..|++||+++|++ + +.+|+|+|.++.++|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 5678899999999999999999999999999999982 1 239999999999999999999999999999
Q ss_pred ------CCCCHHHH----HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 448 ------SPDWPTAF----YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 448 ------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|+++++| |++|.+|..+|++++|+++|++|++++|++.
T Consensus 88 n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 88 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 99999999 9999999999999999999999999999865
No 257
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.79 E-value=5.7e-19 Score=150.47 Aligned_cols=105 Identities=9% Similarity=-0.059 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+++.+++.+|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|+|++|+.+|++|++++|+++.+|+++|
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg 111 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTG 111 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHH
Confidence 467889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+|..+|++++|+++|++|++++|+.
T Consensus 112 ~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 112 QCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999974
No 258
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.78 E-value=9.8e-19 Score=144.74 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC-------H
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW-------P 452 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~-------~ 452 (488)
.+.+.+++++|+.++++|+|++|++.|++||+++|+ ++.+|+++|.+|..+|+|++|+++|++||+++|++ +
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 366889999999999999999999999999999999 99999999999999999999999999999999877 4
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 453 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 453 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+|+++|.++..+|++++|+++|+++++++|+
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 68999999999999999999999999998876
No 259
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.77 E-value=2.5e-19 Score=173.95 Aligned_cols=148 Identities=11% Similarity=0.081 Sum_probs=104.4
Q ss_pred HHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--------------ChHHH--------HHHHH
Q 011349 45 QLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--------------DSRQF--------LEEAR 102 (488)
Q Consensus 45 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~~--------~~E~~ 102 (488)
-|....+.=.-|.+.++||.|+||.||+|...+|+.||||+++..... ..... .+|..
T Consensus 86 AL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~ 165 (397)
T 4gyi_A 86 ALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA 165 (397)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 344555555568899999999999999999889999999997643110 01112 34555
Q ss_pred HHhhcCCCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCC
Q 011349 103 AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182 (488)
Q Consensus 103 ~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~ 182 (488)
.|.++.+.++....-+. ....+|||||++|++|..+.. . +....++.||+.+|.+||+.| ||||||||.
T Consensus 166 nL~rL~~~gv~vp~p~~--~~~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~g-IVHrDLKp~ 234 (397)
T 4gyi_A 166 FMKALYEEGFPVPEPIA--QSRHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKHG-LIHGDFNEF 234 (397)
T ss_dssp HHHHHHHTTCSCCCEEE--EETTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHTT-EECSCCSTT
T ss_pred HHHHHHhcCCCCCeeee--ccCceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHCC-CcCCCCCHH
Confidence 55555433332111111 123479999999999876542 1 134568899999999999999 999999999
Q ss_pred ceeecCCCC----------CeeccCCCcccC
Q 011349 183 RILFDQDGN----------PRLSCFGLMKNS 203 (488)
Q Consensus 183 Nill~~~~~----------~kl~Dfgla~~~ 203 (488)
|||+++++. +.|+||+-+...
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999987763 789999976543
No 260
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.76 E-value=2.4e-18 Score=148.72 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=101.7
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc------------------CCCCchHHHhcHHHHHHhhCCHHHHHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG------------------GTMVSPTVFARRCLCYLLSDMPQEALG 439 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------------------~p~~~~~~~~~~a~~~~~~~~~~~A~~ 439 (488)
+..+.+..+.++|+.+++.|+|++|+..|++||++ +|. ...+|+++|.||.++|+|++|+.
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~ 84 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEE 84 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHH
Confidence 34577899999999999999999999999999998 676 77899999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 440 DAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 440 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++++||+++|+++.+|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 85 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 85 TSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 99999999999999999999999999999999999999999999864
No 261
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=9e-18 Score=138.39 Aligned_cols=101 Identities=21% Similarity=0.294 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..++.+|..++..|+|++|+..|+++++++|+ ++.+|.++|.+|..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45789999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~ 482 (488)
++..+|++++|++.|+++++++
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999
No 262
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.73 E-value=3.1e-17 Score=139.56 Aligned_cols=106 Identities=12% Similarity=0.045 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+++..++.+|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 366789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|++.|+++++++|+++
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 123 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQELIANXP 123 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 999999999999999999999998754
No 263
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.72 E-value=3.9e-17 Score=141.30 Aligned_cols=107 Identities=25% Similarity=0.364 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++..++.+|..++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|+|++|+.+|+++++++|+++.+|+++|
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 367889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccccC
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKHR 487 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~~ 487 (488)
.++..+|++++|+++|+++++++|++..
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGGS 114 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCchH
Confidence 9999999999999999999999998753
No 264
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.72 E-value=1.7e-17 Score=141.57 Aligned_cols=106 Identities=13% Similarity=0.118 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+.+..++..|..+++.|+|++|++.|+++|+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|
T Consensus 28 p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 106 (150)
T 4ga2_A 28 RQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIA 106 (150)
T ss_dssp HHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 366778899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHH-HHHhhccccccc
Q 011349 460 AALFGLGMNNDAQET-LKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~-~~~al~l~p~~~ 486 (488)
.++..+|++++|.+. +++|++++|+++
T Consensus 107 ~~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 107 ELLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp HHHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred HHHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 999999999988876 599999999864
No 265
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.71 E-value=7.5e-17 Score=136.03 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+++..++..|..+++.|+|++|+..|+++++.+|+ ++.+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 93 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAA 93 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHH
Confidence 356788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|++.|+++++++|++.
T Consensus 94 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 120 (142)
T 2xcb_A 94 ECHLQLGDLDGAESGFYSARALAAAQP 120 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999754
No 266
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.70 E-value=6.7e-17 Score=132.40 Aligned_cols=101 Identities=11% Similarity=0.028 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 011349 385 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 464 (488)
Q Consensus 385 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 464 (488)
.++.+|..+++.|++++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..|++|++++|+++.+++.+|.++..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhccccccc
Q 011349 465 LGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 465 ~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|++++|++.|+++++++|+..
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHHC------
T ss_pred cCCHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999999865
No 267
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.65 E-value=7.4e-16 Score=128.43 Aligned_cols=102 Identities=22% Similarity=0.432 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..++..|..++..|+|++|+..|+++++++|+ ++.+++++|.++..+|++++|+.+++++++++|+++.+|+++|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+..+|++++|++.|+++++++|+
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHChh
Confidence 99999999999999999999997
No 268
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.62 E-value=1e-15 Score=137.95 Aligned_cols=103 Identities=16% Similarity=0.040 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhc----------------HHHHHHhhCCHHHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFAR----------------RCLCYLLSDMPQEALGDAMQAQV 446 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~al~ 446 (488)
+..+..+|..+++.|+|++|+..|+++++++|+ ++.+|+. +|.+|..+|++++|+..|+++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 456777888888888888888888888888887 7777777 88888888888888888888888
Q ss_pred hCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 447 ISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 447 l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++|+++.+|+++|.++..+|++++|++.|+++++++|++.
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~ 122 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNL 122 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 8888888888888888888888888888888888888753
No 269
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.62 E-value=1.6e-15 Score=160.99 Aligned_cols=105 Identities=13% Similarity=0.027 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+.+.+++++|.++.+.|++++|++.|++||+++|+ ++.+|+++|.+|..+|++++|++.|++|++++|+++.+|+++|.
T Consensus 41 ~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~ 119 (723)
T 4gyw_A 41 EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLAS 119 (723)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|..+|++++|+++|++|++++|+..
T Consensus 120 ~~~~~g~~~eAi~~~~~Al~l~P~~~ 145 (723)
T 4gyw_A 120 IHKDSGNIPEAIASYRTALKLKPDFP 145 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999999853
No 270
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.62 E-value=3.6e-15 Score=133.09 Aligned_cols=109 Identities=19% Similarity=0.265 Sum_probs=103.1
Q ss_pred hhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch----------------HHHhcHHHHHHhhCCHHHHHHH
Q 011349 377 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----------------TVFARRCLCYLLSDMPQEALGD 440 (488)
Q Consensus 377 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------~~~~~~a~~~~~~~~~~~A~~~ 440 (488)
.+..+.+..+..+|..++..|+|++|+..|++++++.|. ++ .++.++|.+|..+|++++|+.+
T Consensus 32 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 110 (198)
T 2fbn_A 32 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 110 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 455677889999999999999999999999999999998 65 8999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 441 AMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 441 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++++++++|+++.+++++|.++..+|++++|++.|+++++++|+..
T Consensus 111 ~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 156 (198)
T 2fbn_A 111 ASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 156 (198)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9999999999999999999999999999999999999999999753
No 271
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.62 E-value=2.9e-16 Score=132.17 Aligned_cols=91 Identities=14% Similarity=0.061 Sum_probs=85.6
Q ss_pred HhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 011349 394 FRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMP----------QEALGDAMQAQVISPDWPTAFYLQAAALF 463 (488)
Q Consensus 394 ~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 463 (488)
-+.++|++|++.|++|++++|+ ++.+|+++|.++..++++ ++|+..|++||+++|++++||+++|.+|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 3557899999999999999999 999999999999999875 59999999999999999999999999999
Q ss_pred hCC-----------ChHHHHHHHHHhhcccccc
Q 011349 464 GLG-----------MNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 464 ~~~-----------~~~~A~~~~~~al~l~p~~ 485 (488)
.+| ++++|+++|++|++++|++
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 885 8999999999999999985
No 272
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.61 E-value=6.1e-15 Score=118.67 Aligned_cols=104 Identities=24% Similarity=0.384 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..++..|..++..|+|++|+..|+++++.+|. ++.++.++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+..+|++++|++.|+++++++|+..
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~ 106 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNP 106 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999999753
No 273
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.61 E-value=3.5e-15 Score=144.96 Aligned_cols=107 Identities=12% Similarity=0.154 Sum_probs=102.4
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---------------hHHHhcHHHHHHhhCCHHHHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---------------PTVFARRCLCYLLSDMPQEALGDAMQ 443 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 443 (488)
....+..++.+|+.+++.|+|++|+..|++|++++|+ + ..+|+++|.||.++|+|++|+.+|++
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4567889999999999999999999999999999999 6 68999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 444 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|++++|+++.+|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 222 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 264 (336)
T 1p5q_A 222 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 264 (336)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999999999999999999999999863
No 274
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.61 E-value=6e-15 Score=121.67 Aligned_cols=105 Identities=23% Similarity=0.364 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+.+++.+|..++..|+|++|+..|+++++.+|. +..++.++|.+|...|++++|+..++++++++|+++.+++++|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 34678999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|++.
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 118 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCK 118 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGT
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999999999753
No 275
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.61 E-value=3.3e-15 Score=151.40 Aligned_cols=107 Identities=14% Similarity=0.217 Sum_probs=99.6
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---------------hHHHhcHHHHHHhhCCHHHHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---------------PTVFARRCLCYLLSDMPQEALGDAMQ 443 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 443 (488)
..+.+..++.+|+.+++.|+|++|+..|++|++++|. + ..+|+|+|.||.++|+|++|+.+|++
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4567889999999999999999999999999999998 6 68999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 444 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|++++|+++++|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999864
No 276
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.60 E-value=6e-16 Score=131.83 Aligned_cols=97 Identities=10% Similarity=-0.082 Sum_probs=90.6
Q ss_pred HHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCh
Q 011349 389 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMN 468 (488)
Q Consensus 389 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~ 468 (488)
.|..+..+|++++|+..|.+++..+|+ .+..++++|.+|.++|+|++|+++|+++++++|+++.+|+++|.++..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 578888999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccc
Q 011349 469 NDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 469 ~~A~~~~~~al~l~p~~~ 486 (488)
++|+.+|+++++++|+..
T Consensus 82 ~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQK 99 (150)
T ss_dssp HHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 999999999999999864
No 277
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.59 E-value=4.4e-15 Score=140.46 Aligned_cols=104 Identities=21% Similarity=0.431 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..++.+|..++..|+|++|+..|++|++++|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+++++|.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|..+|++++|++.|+++++++|+..
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCccch
Confidence 9999999999999999999999763
No 278
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=9.7e-15 Score=122.95 Aligned_cols=104 Identities=23% Similarity=0.269 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
.+..++..|..++..|+|++|+..|+++++.+|+ + ..++.++|.+|..+|++++|+..++++++++|+++.+|+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 4578899999999999999999999999999998 7 88999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|.++..+|++++|+..|+++++++|++.
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~ 133 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNK 133 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcH
Confidence 9999999999999999999999999753
No 279
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.58 E-value=1.1e-14 Score=128.03 Aligned_cols=105 Identities=20% Similarity=0.198 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..+...|..+...++++.|+..+.++++++|+ +..++..+|.+|..+|++++|++.|+++++++|+++.+|+++|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~ 149 (184)
T 3vtx_A 71 TSAEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGL 149 (184)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHH
Confidence 34678889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|..+|++++|+++|++|++++|++.
T Consensus 150 ~~~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 150 AYEGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhCCccCH
Confidence 99999999999999999999999753
No 280
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.58 E-value=2e-14 Score=123.52 Aligned_cols=107 Identities=23% Similarity=0.380 Sum_probs=101.5
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
..+.+..++..|..++..|+|++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+|+++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 3467889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|.++..+|++++|++.|+++++++|+..
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~~ 115 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHDK 115 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999753
No 281
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.58 E-value=5e-15 Score=134.36 Aligned_cols=105 Identities=14% Similarity=0.215 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..++.+|..+++.|++++|+..|+++++++|+ ++.+++++|.++..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhC-----------CChHHHHHHHHHhhccccccc
Q 011349 461 ALFGL-----------GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~-----------~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+ |++++|++.|+++++++|+..
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 99999 999999999999999999853
No 282
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.58 E-value=7.1e-15 Score=156.10 Aligned_cols=103 Identities=20% Similarity=0.163 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+.+.+|+++|.++.+.|++++|++.|++||+++|+ ++.+|+++|.+|..+|++++|++.|++|++++|+++.+|+++|.
T Consensus 75 ~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~-~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~ 153 (723)
T 4gyw_A 75 TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA-FADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAH 153 (723)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhh
Confidence 56778888888888888888888888888888888 88888888888888888888888888888888888888888888
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+|..+|++++|++.|++++++.|+
T Consensus 154 ~l~~~g~~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 154 CLQIVCDWTDYDERMKKLVSIVAD 177 (723)
T ss_dssp HHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHhcccHHHHHHHHHHHHHhChh
Confidence 888888888888888888888776
No 283
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.58 E-value=9.6e-15 Score=120.20 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch---HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---HHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP---TVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---PTAFYL 457 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~~ 457 (488)
..++.+|..++..|+|++|+..|+++++.+|+ +. .+++++|.+|...|++++|+..|+++++.+|++ +.+++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 35788999999999999999999999999998 66 789999999999999999999999999999999 999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|.++..+|++++|++.|+++++.+|+.
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999975
No 284
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.58 E-value=8.6e-15 Score=116.69 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC--CHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD--WPTAFYLQAA 460 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~--~~~a~~~~g~ 460 (488)
+..++.+|..++..|+|++|+..|+++++++|. +..++.++|.++..+|++++|+..++++++++|+ +..+++.+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 456778999999999999999999999999999 9999999999999999999999999999999999 9999999999
Q ss_pred HHHhC-CChHHHHHHHHHhhccccccc
Q 011349 461 ALFGL-GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~-~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+ |++++|+++++++++.+|..+
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999 999999999999999999754
No 285
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.58 E-value=4.6e-15 Score=144.17 Aligned_cols=109 Identities=16% Similarity=0.216 Sum_probs=98.1
Q ss_pred hhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch-----------------HHHhcHHHHHHhhCCHHHHHH
Q 011349 377 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP-----------------TVFARRCLCYLLSDMPQEALG 439 (488)
Q Consensus 377 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~ 439 (488)
.+..+.+..++.+|+.+++.|+|++|+..|++|+++.|+ +. .+|+++|.||.++|+|++|+.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 355677889999999999999999999999999999998 65 389999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 440 DAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 440 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|++|++++|+++.+|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~ 298 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDK 298 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Confidence 99999999999999999999999999999999999999999999864
No 286
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.57 E-value=3.2e-15 Score=147.31 Aligned_cols=104 Identities=8% Similarity=-0.026 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHhcCC-hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKD-FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+++.+|+.+|.++...|+ |++|+..|++||+++|+ ++.+|+++|.++..+|++++|+.+|++||+++|+++.+|+++|
T Consensus 129 ~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg 207 (382)
T 2h6f_A 129 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQ 207 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHH
Confidence 556788888888888886 88888888888888888 8888888888888888888888888888888888888888888
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.++..+|++++|+++|+++++++|++
T Consensus 208 ~~~~~~g~~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 208 WVIQEFKLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 88888888888888888888888865
No 287
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.57 E-value=6.4e-15 Score=144.83 Aligned_cols=109 Identities=20% Similarity=0.270 Sum_probs=102.6
Q ss_pred hhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhc----------------cCCCCchHHHhcHHHHHHhhCCHHHHHHH
Q 011349 377 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFID----------------GGTMVSPTVFARRCLCYLLSDMPQEALGD 440 (488)
Q Consensus 377 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~ 440 (488)
.+..+.+..++.+|+.+++.|+|++|+..|++|++ ++|. ...+|+++|.+|.++|+|++|+.+
T Consensus 217 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 217 DKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHHH
Confidence 34456778899999999999999999999999998 7887 889999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 441 AMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 441 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|++|++++|+++++|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 296 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~ 341 (370)
T 1ihg_A 296 CLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 341 (370)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999999753
No 288
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.57 E-value=1.4e-14 Score=130.56 Aligned_cols=96 Identities=9% Similarity=0.005 Sum_probs=90.1
Q ss_pred HHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh----
Q 011349 389 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG---- 464 (488)
Q Consensus 389 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~---- 464 (488)
+|.+++..|+|++|+..|+++++++|+ ++.+++++|.+|..+|++++|+.+|+++++++|+++.+|+++|.+|+.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999 999999999999999999999999999999999999999988887643
Q ss_pred -------------------------------CCChHHHHHHHHHhhcccccc
Q 011349 465 -------------------------------LGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 465 -------------------------------~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|+|++|+++|++|++++|+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 346899999999999999973
No 289
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.56 E-value=1.3e-14 Score=132.26 Aligned_cols=104 Identities=18% Similarity=0.165 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCC-CCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGT-MVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
++..++.+|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+.+|+++++++|+++.+|+.+|.
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 457899999999999999999999999999998 7 88888899999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|++.
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999999854
No 290
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.56 E-value=4e-14 Score=116.02 Aligned_cols=106 Identities=21% Similarity=0.282 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++..++..|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 466789999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|++.|+++++++|+..
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 114 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDNE 114 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccch
Confidence 999999999999999999999999753
No 291
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.56 E-value=9.3e-15 Score=144.03 Aligned_cols=105 Identities=13% Similarity=-0.054 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCC-HHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM-PQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+.+.+|..+|.++...|++++|+..|+++|+++|+ +..+|+++|.++..+|+ +++|+.+|++||+++|+++.+|+++|
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g 173 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 173 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 56789999999999999999999999999999999 99999999999999997 99999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|+++|++|++++|++.
T Consensus 174 ~~~~~~g~~~eAl~~~~kal~ldP~~~ 200 (382)
T 2h6f_A 174 VLVEWLRDPSQELEFIADILNQDAKNY 200 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCccCH
Confidence 999999999999999999999999863
No 292
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.54 E-value=3.7e-14 Score=116.34 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC-------HH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW-------PT 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~-------~~ 453 (488)
+.+..++..|..++..|+|++|+..|+++++.+|. ++.++.++|.+|..+|++++|+..+++++++.|++ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 45678999999999999999999999999999999 99999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 454 AFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 454 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+++++|.++..+|++++|++.|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999885
No 293
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.54 E-value=4.5e-15 Score=120.52 Aligned_cols=91 Identities=13% Similarity=0.036 Sum_probs=82.5
Q ss_pred hcCChHHHHHHHHHhhcc---CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHH
Q 011349 395 RAKDFPTAIECYTHFIDG---GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDA 471 (488)
Q Consensus 395 ~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 471 (488)
..|+|++|+..|++++++ +|+ +..++.++|.+|..+|+|++|+..|+++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 588 8899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccc
Q 011349 472 QETLKDGTNLEAKKH 486 (488)
Q Consensus 472 ~~~~~~al~l~p~~~ 486 (488)
++.|+++++++|+.+
T Consensus 81 ~~~~~~al~~~p~~~ 95 (117)
T 3k9i_A 81 VELLLKIIAETSDDE 95 (117)
T ss_dssp HHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHhCCCcH
Confidence 999999999988753
No 294
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.53 E-value=3.4e-14 Score=128.89 Aligned_cols=103 Identities=15% Similarity=0.060 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhc-----------CChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCC
Q 011349 381 QETLNSKKRGDAAFRA-----------KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISP 449 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~-----------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p 449 (488)
+++..++.+|.++... |++++|+..|+++++++|+ ++.++.++|.+|..+|++++|+..|++|++++
T Consensus 71 ~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~- 148 (217)
T 2pl2_A 71 RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE- 148 (217)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-
Confidence 4566777888888888 8888888888888888887 77788888888888888888888888888888
Q ss_pred CCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 450 DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 450 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+++.+++++|.++..+|++++|++.|+++++++|+.
T Consensus 149 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 184 (217)
T 2pl2_A 149 DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKD 184 (217)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 778888888888888888888888888888888765
No 295
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.52 E-value=8.1e-14 Score=122.41 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++.++..+|.++++.|++++|+..+.+++..+|+ .+.++.++|.++...++++.|+..+.++++++|++..+++.+|.
T Consensus 37 ~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~ 115 (184)
T 3vtx_A 37 NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGL 115 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 44566666666666666666666666666666666 66666666666666777777777777777788888888888888
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+|++++|++.|+++++++|+.
T Consensus 116 ~~~~~g~~~~A~~~~~~~l~~~p~~ 140 (184)
T 3vtx_A 116 VYDSMGEHDKAIEAYEKTISIKPGF 140 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHhCCchhHHHHHHHHHHhcchh
Confidence 8888888888888888888888865
No 296
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.51 E-value=1.1e-13 Score=126.08 Aligned_cols=103 Identities=16% Similarity=0.177 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH-------H
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP-------T 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-------~ 453 (488)
.+...++.+|.+++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++ .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 45578888999999999999999999999999999 999999999999999999999999999999999999 7
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 454 AFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 454 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+|+++|.++..+|++++|++.|++|++++|+
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999999999997
No 297
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.50 E-value=1.5e-13 Score=123.53 Aligned_cols=103 Identities=16% Similarity=0.096 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH---------
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP--------- 452 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~--------- 452 (488)
++..++..|.+++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+.+|++++++.|++.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 114 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 114 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcc
Confidence 4678999999999999999999999999999999 999999999999999999999999999999988877
Q ss_pred -------HHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 453 -------TAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 453 -------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+++++|.++..+|++++|++.|+++++++|+.
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 115 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred ccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 999999999999999999999999999999964
No 298
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.50 E-value=2.5e-13 Score=110.16 Aligned_cols=104 Identities=18% Similarity=0.234 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..++..|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 86 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 3678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+..+|++++|+..|+++++++|+..
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~~~~~ 111 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALELDPNNA 111 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCcH
Confidence 9999999999999999999999753
No 299
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.50 E-value=1.2e-13 Score=120.64 Aligned_cols=105 Identities=14% Similarity=0.133 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHH-HHhhCCH--HHHHHHHHHHHHhCCCCHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLC-YLLSDMP--QEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~--~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
.++..|+..|..++..|+|++|+..|+++++++|+ ++.++.++|.+ +...|++ ++|+..++++++++|+++.+++.
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 120 (177)
T 2e2e_A 42 QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALML 120 (177)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHH
Confidence 45678999999999999999999999999999999 99999999999 8899999 99999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|.++..+|++++|+..|+++++++|+..
T Consensus 121 la~~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 121 LASDAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 99999999999999999999999999764
No 300
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.5e-14 Score=115.62 Aligned_cols=96 Identities=14% Similarity=0.203 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC------HHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW------PTAF 455 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~ 455 (488)
++..++.+|..++..|+|++|+..|+++++++|+ ++.+++++|.+|..+|++++|+.+++++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 4678999999999999999999999999999999 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHh
Q 011349 456 YLQAAALFGLGMNNDAQETLKDG 478 (488)
Q Consensus 456 ~~~g~~~~~~~~~~~A~~~~~~a 478 (488)
+++|.++..+|++++|++.|++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999998877653
No 301
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.47 E-value=2.9e-14 Score=145.09 Aligned_cols=105 Identities=24% Similarity=0.379 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+.+.+++.+|..+++.|+|++|++.|++|++++|+ ++.+|+++|.+|.++|++++|+++|++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 55678889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|..+|++++|++.|++|++++|+..
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999764
No 302
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.47 E-value=1.2e-13 Score=129.06 Aligned_cols=137 Identities=12% Similarity=-0.005 Sum_probs=109.3
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+.+...+|.|+.+.||++... ++.+++|+...........+.+|+.+++.+. +.+++++++++...+..|+|||+++|
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 456666788888999999754 6779999987532233456899999999995 67888999999888899999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh--------------------------------------------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-------------------------------------------- 170 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-------------------------------------------- 170 (488)
.+|.+.+. +......++.+++++|..||+
T Consensus 95 ~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 95 VLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp EEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred eehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 99987642 122345788899999999998
Q ss_pred ---------------CCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 171 ---------------KGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 171 ---------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
.. ++|+|++|.|||++++..+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEE-EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCce-EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 23 7999999999999876566799999764
No 303
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.45 E-value=4.8e-14 Score=119.85 Aligned_cols=84 Identities=7% Similarity=-0.263 Sum_probs=80.2
Q ss_pred HHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 402 AIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 402 A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
+-..|+++++++|+ +..+++++|.++...|+|++|+..|+++++++|+++.+|+++|.++..+|+|++|+++|++|+++
T Consensus 21 ~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 21 SGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp TSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 44668999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 011349 482 EAKKH 486 (488)
Q Consensus 482 ~p~~~ 486 (488)
+|++.
T Consensus 100 ~P~~~ 104 (151)
T 3gyz_A 100 GKNDY 104 (151)
T ss_dssp SSSCC
T ss_pred CCCCc
Confidence 99864
No 304
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.44 E-value=6.9e-13 Score=123.83 Aligned_cols=106 Identities=14% Similarity=-0.001 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
...+..++.+|..++..|++++|+..|+++++++|+ +..++.++|.+|...|++++|+..|+++++++|+++.+++.+|
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 456889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|++.|+++++++|+..
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999999753
No 305
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.44 E-value=8.8e-13 Score=118.50 Aligned_cols=102 Identities=13% Similarity=0.101 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..++.+|..++..|+|++|+..|++++ +| ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 456788999999999999999999999997 34 56799999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|++++++.|++.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999988754
No 306
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.2e-12 Score=120.82 Aligned_cols=102 Identities=21% Similarity=0.291 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
...+..+...|..++..|+|++|+..|+++++.+|. ++.++.++|.+|..+|++++|+..++++++++|+++.+|+.+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 214 (258)
T 3uq3_A 136 PEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKA 214 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 356788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~ 482 (488)
.++..+|++++|++.|+++++++
T Consensus 215 ~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 215 TAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhC
Confidence 99999999999999999999999
No 307
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.41 E-value=4.2e-13 Score=108.25 Aligned_cols=85 Identities=16% Similarity=0.148 Sum_probs=81.9
Q ss_pred HHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhh
Q 011349 400 PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGT 479 (488)
Q Consensus 400 ~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 479 (488)
++|+..|+++++.+|+ ++.+++++|.+|...|++++|+..|+++++++|+++.+|+.+|.++..+|++++|++.|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 011349 480 NLEAKK 485 (488)
Q Consensus 480 ~l~p~~ 485 (488)
+++|+.
T Consensus 81 ~~~~~~ 86 (115)
T 2kat_A 81 AAAQSR 86 (115)
T ss_dssp HHHHHH
T ss_pred Hhcccc
Confidence 999864
No 308
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.41 E-value=8.1e-13 Score=123.10 Aligned_cols=105 Identities=13% Similarity=0.045 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---HHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---PTA 454 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---~~a 454 (488)
.++..++.+|..+++.|+|++|+..|+++++.+|+ + +.+++++|.+|..+|+|++|+..|+++++++|++ +.+
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 45678999999999999999999999999999998 7 8899999999999999999999999999998854 679
Q ss_pred HHHHHHHHHh--------CCChHHHHHHHHHhhccccccc
Q 011349 455 FYLQAAALFG--------LGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 455 ~~~~g~~~~~--------~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++.+|.+++. +|++++|++.|+++++++|+..
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 9999999999 9999999999999999999864
No 309
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.40 E-value=2.8e-13 Score=144.10 Aligned_cols=105 Identities=10% Similarity=-0.081 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+++..++.+|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+++|++|++++|+++.+|+++|
T Consensus 430 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg 508 (681)
T 2pzi_A 430 SESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALA 508 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHH
T ss_pred ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 356789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++ ++.|++|++++|+..
T Consensus 509 ~~~~~~g~~~~-~~~~~~al~~~P~~~ 534 (681)
T 2pzi_A 509 ATAELAGNTDE-HKFYQTVWSTNDGVI 534 (681)
T ss_dssp HHHHHHTCCCT-TCHHHHHHHHCTTCH
T ss_pred HHHHHcCChHH-HHHHHHHHHhCCchH
Confidence 99999999999 999999999999853
No 310
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.40 E-value=5e-13 Score=104.51 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=86.9
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHhhccCCCCchH-HHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 011349 386 SKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT-VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 464 (488)
Q Consensus 386 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 464 (488)
.+++|..++..|+|++|+..|+++++.+|+ ++. +++++|.+|..+|++++|+..|+++++++|+++.++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 357899999999999999999999999999 888 99999999999999999999999999999999999866
Q ss_pred CCChHHHHHHHHHhhcccccccC
Q 011349 465 LGMNNDAQETLKDGTNLEAKKHR 487 (488)
Q Consensus 465 ~~~~~~A~~~~~~al~l~p~~~~ 487 (488)
+.+.+|+..|+++++++|+...
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCSS
T ss_pred -HHHHHHHHHHHHHhccCccccc
Confidence 7889999999999999998653
No 311
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.39 E-value=1.6e-12 Score=118.48 Aligned_cols=105 Identities=9% Similarity=0.020 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc--hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH---HHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS--PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT---AFY 456 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~---a~~ 456 (488)
.+..++.+|..+++.|+|++|+..|+++++..|++. ..+++++|.+|.++|+|++|+..|+++++++|+++. +++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 356899999999999999999999999999998722 368999999999999999999999999999999975 899
Q ss_pred HHHHHHHh------------------CCChHHHHHHHHHhhccccccc
Q 011349 457 LQAAALFG------------------LGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 457 ~~g~~~~~------------------~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|.+++. +|++++|+..|+++++.+|+..
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 99999986 6899999999999999999864
No 312
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.39 E-value=4.1e-12 Score=104.17 Aligned_cols=102 Identities=20% Similarity=0.244 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
+...+...|..+...|++++|+..|+++++.+|. ...++.++|.++...|++++|+..++++++..|++..+++.+|.+
T Consensus 34 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 112 (136)
T 2fo7_A 34 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 (136)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4567888999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+..+|++++|+..|+++++++|+
T Consensus 113 ~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 113 YYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHccHHHHHHHHHHHHccCCC
Confidence 99999999999999999999986
No 313
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.38 E-value=3.8e-12 Score=104.37 Aligned_cols=101 Identities=20% Similarity=0.244 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 463 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 463 (488)
.+++..|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..+++++++.|+++.+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 46888999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 011349 464 GLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 464 ~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+|++++|++.|+++++++|+.
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999998864
No 314
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.38 E-value=1.6e-12 Score=106.91 Aligned_cols=82 Identities=13% Similarity=0.075 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++..|..+|.+++..|++++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|+++++++|++.+++..++
T Consensus 44 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~ 122 (126)
T 4gco_A 44 PENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK-FIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVR 122 (126)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHH
Confidence 356889999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred HHH
Q 011349 460 AAL 462 (488)
Q Consensus 460 ~~~ 462 (488)
.++
T Consensus 123 ~~l 125 (126)
T 4gco_A 123 NCL 125 (126)
T ss_dssp HHC
T ss_pred Hhc
Confidence 874
No 315
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.37 E-value=2e-12 Score=126.47 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..+...|++++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 5678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+..+|++++|++.|+++++++|+.
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999874
No 316
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.37 E-value=1.6e-12 Score=127.18 Aligned_cols=104 Identities=15% Similarity=0.097 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..++.+|..+++.|+|++|+..|+++++.+|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+|+.+|.+
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVS 142 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3457899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+..+|++++|++.|+++++++|+..
T Consensus 143 ~~~~g~~~~A~~~~~~al~~~p~~~ 167 (365)
T 4eqf_A 143 YTNTSHQQDACEALKNWIKQNPKYK 167 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHHH
T ss_pred HHccccHHHHHHHHHHHHHhCccch
Confidence 9999999999999999999999743
No 317
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.36 E-value=4.3e-12 Score=110.41 Aligned_cols=105 Identities=12% Similarity=0.068 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|.
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 152 (186)
T 3as5_A 74 DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAF 152 (186)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 34678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|+..
T Consensus 153 ~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 153 SYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 99999999999999999999999754
No 318
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.36 E-value=3.2e-12 Score=133.16 Aligned_cols=104 Identities=9% Similarity=-0.023 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++..+...|..+...|++++|++.|+++++++|+ +..+++++|.+|..+|++++|++.|+++++++|+++.+++++|.
T Consensus 55 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 133 (568)
T 2vsy_A 55 GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLN 133 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44667777777777777777777777777777777 77777777777777777777777777777777777777777777
Q ss_pred HHHhC---CChHHHHHHHHHhhcccccc
Q 011349 461 ALFGL---GMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~---~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+ |++++|++.|+++++.+|+.
T Consensus 134 ~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 134 WRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 77777 77777777777777777764
No 319
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.35 E-value=4.2e-12 Score=122.95 Aligned_cols=101 Identities=17% Similarity=0.245 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..++..|..++..|+|++|+..|+++++.+|+ ++.++.++|.++..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 5678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p 483 (488)
+..+|++++|++.|+++++++|
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCC
T ss_pred HHHcCChHHHHHHHHHHHhcCC
Confidence 9999999999999999999999
No 320
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.35 E-value=6e-12 Score=96.26 Aligned_cols=85 Identities=18% Similarity=0.137 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..++..|..++..|+|++|+..|+++++.+|+ +..++.++|.+|...|++++|+..++++++++|+++.+++++|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCC
Q 011349 461 ALFGLG 466 (488)
Q Consensus 461 ~~~~~~ 466 (488)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998764
No 321
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.34 E-value=6.1e-12 Score=128.47 Aligned_cols=105 Identities=22% Similarity=0.295 Sum_probs=99.9
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
+.+.+..++.+|..+++.|+|++|+..|+++++.+| ++.+|.++|.+|..+|++++|+.+++++++++|+++.+|+.+
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 79 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE--DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRR 79 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc--cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHH
Confidence 346789999999999999999999999999999998 578899999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
|.++..+|++++|+..|+++++++|..
T Consensus 80 ~~~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 80 ASANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999853
No 322
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.34 E-value=1.9e-12 Score=131.81 Aligned_cols=103 Identities=12% Similarity=0.039 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHhc---------CChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh--------CCHHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRA---------KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS--------DMPQEALGDAMQAQ 445 (488)
Q Consensus 383 ~~~~~~~g~~~~~~---------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~--------~~~~~A~~~~~~al 445 (488)
+..+...|.++... |+|++|+..|++|++++|+ ++.+|+++|.+|..+ |++++|+..|++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 57899999999999 9999999999999999999 999999999999999 99999999999999
Q ss_pred HhCC---CCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 446 VISP---DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 446 ~l~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+++| +++.+|+++|.+|..+|++++|++.|++|++++|++.
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999 9999999999999999999999999999999999864
No 323
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.33 E-value=5.2e-12 Score=110.22 Aligned_cols=105 Identities=13% Similarity=-0.020 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHH-HHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLC-YLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
..+++.+++..|..+...|++++|+..|+++++.+| ++.++..++.+ +...++..+|+..++++++++|+++.+++.
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~ 113 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACE 113 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHH
Confidence 446788999999999999999999999999999998 34455555543 333344556899999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|.++..+|++++|+..|+++++++|+.
T Consensus 114 la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 114 LAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999874
No 324
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.33 E-value=1.1e-11 Score=107.74 Aligned_cols=103 Identities=15% Similarity=0.062 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 119 (186)
T 3as5_A 41 DVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVA 119 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHH
Confidence 4678899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+..+|++++|++.|+++++++|+.
T Consensus 120 ~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 120 LDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHcCcHHHHHHHHHHHHhcCccc
Confidence 999999999999999999998864
No 325
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.33 E-value=5.8e-12 Score=119.27 Aligned_cols=104 Identities=12% Similarity=-0.058 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++.+++.+|.++.+.|++++|+..|++++..+|+ ......+.+..+...++.++|+..++++++++|+++.+++++|.
T Consensus 149 ~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~ 227 (287)
T 3qou_A 149 QNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD-TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLAL 227 (287)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS-HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc-hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHH
Confidence 34455566666666666666666666666666664 55555555555555566666677788889999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|..+|++++|++.|+++++++|+.
T Consensus 228 ~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 228 QLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHcccHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999986
No 326
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.33 E-value=2.3e-12 Score=131.09 Aligned_cols=104 Identities=13% Similarity=-0.005 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHhcCCh-HHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDF-PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~-~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.++..++.+|..++..|+| ++|+..|++|++++|+ ++.+|+++|.+|..+|++++|++.|++|++++|+ +.+++++|
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg 177 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLS 177 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHH
Confidence 4678999999999999999 9999999999999999 9999999999999999999999999999999999 79999999
Q ss_pred HHHHhC---------CChHHHHHHHHHhhccccccc
Q 011349 460 AALFGL---------GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~---------~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+ |++++|++.|++|++++|+..
T Consensus 178 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 213 (474)
T 4abn_A 178 MVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG 213 (474)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH
Confidence 999999 999999999999999999853
No 327
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.32 E-value=8.6e-12 Score=113.99 Aligned_cols=105 Identities=13% Similarity=0.095 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.+...+...|..++..|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++.+|+++.+++.+|.
T Consensus 123 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 201 (243)
T 2q7f_A 123 ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGV 201 (243)
T ss_dssp CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 34668899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|+..
T Consensus 202 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 227 (243)
T 2q7f_A 202 TYAYKENREKALEMLDKAIDIQPDHM 227 (243)
T ss_dssp HHHHTTCTTHHHHHHHHHHHHCTTCH
T ss_pred HHHHccCHHHHHHHHHHHHccCcchH
Confidence 99999999999999999999999854
No 328
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.31 E-value=3.9e-12 Score=99.87 Aligned_cols=73 Identities=18% Similarity=0.155 Sum_probs=58.6
Q ss_pred cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 412 GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 412 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+|+ ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|++.|+++++++|+.
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 3677 778888888888888888888888888888888888888888888888888888888888888887754
No 329
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.31 E-value=1.1e-11 Score=113.31 Aligned_cols=102 Identities=14% Similarity=0.109 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 90 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 168 (243)
T 2q7f_A 90 AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGME-NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMC 168 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 3455566666666666666666666666666666 566666666666666666666666666666666666666666666
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+..+|++++|++.|+++++++|+
T Consensus 169 ~~~~~~~~~A~~~~~~~~~~~~~ 191 (243)
T 2q7f_A 169 LANEGMLDEALSQFAAVTEQDPG 191 (243)
T ss_dssp HHHHTCCHHHHHHHHHHHHHCTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCcc
Confidence 66666666666666666666554
No 330
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.31 E-value=6.3e-12 Score=117.01 Aligned_cols=103 Identities=16% Similarity=0.089 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC--chHHHhcHHHHHHh--------hCCHHHHHHHHHHHHHhCCCCH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV--SPTVFARRCLCYLL--------SDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~a~~~~~--------~~~~~~A~~~~~~al~l~p~~~ 452 (488)
+.+++.+|.+++..|+|++|+..|++++++.|++ .+.+++++|.++.. +|++++|+..|+++++++|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 6789999999999999999999999999998851 45789999999999 9999999999999999999997
Q ss_pred HHH-----------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 453 TAF-----------------YLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 453 ~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.++ +.+|.+|+.+|++++|+..|+++++.+|+.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 766 899999999999999999999999999974
No 331
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.31 E-value=5.5e-12 Score=129.72 Aligned_cols=107 Identities=25% Similarity=0.322 Sum_probs=96.0
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
+..+.+..++.+|..+++.|+|++|+..|+++++.+|+ ++.++.++|.+|..+|++++|+..|+++++++|+++.+++.
T Consensus 20 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 98 (537)
T 3fp2_A 20 QRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLR 98 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHH
Confidence 34467899999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|.++..+|++++|++.|+ ++.++|+..
T Consensus 99 la~~~~~~g~~~~A~~~~~-~~~~~~~~~ 126 (537)
T 3fp2_A 99 RASANESLGNFTDAMFDLS-VLSLNGDFD 126 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHC------
T ss_pred HHHHHHHcCCHHHHHHHHH-HHhcCCCCC
Confidence 9999999999999999996 888888743
No 332
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.31 E-value=7.1e-12 Score=122.29 Aligned_cols=103 Identities=15% Similarity=0.199 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..+...|++++|+..|+++++++|+ ++.+++++|.++..+|++++|+..|+++++++|+++.+++++|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+..+|++++|++.|+++++++|+.
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999975
No 333
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.31 E-value=1.7e-12 Score=110.03 Aligned_cols=84 Identities=10% Similarity=-0.066 Sum_probs=79.9
Q ss_pred HHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 402 AIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 402 A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
+-..|+++++++|+ +..+++++|.++...|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+++|++|+++
T Consensus 6 ~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 6 GGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34568999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 011349 482 EAKKH 486 (488)
Q Consensus 482 ~p~~~ 486 (488)
+|++.
T Consensus 85 ~p~~~ 89 (148)
T 2vgx_A 85 DIXEP 89 (148)
T ss_dssp STTCT
T ss_pred CCCCc
Confidence 99864
No 334
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.30 E-value=1.4e-11 Score=123.71 Aligned_cols=106 Identities=16% Similarity=0.244 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++..+..+|..+++.|+|++|+..|+++++.+|+ ++.+++++|.+|..+|++++|+..|+++++++|+++.+++.+|
T Consensus 23 p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 101 (450)
T 2y4t_A 23 MADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRG 101 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 467889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|..+|++++|++.|+++++++|+..
T Consensus 102 ~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 102 HLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999999999753
No 335
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.30 E-value=7.5e-12 Score=116.57 Aligned_cols=126 Identities=12% Similarity=0.065 Sum_probs=97.6
Q ss_pred CCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC--CcccccceecCCeeeEEEecCCCCChhhh
Q 011349 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER--LVNLIGCCCEGEERLLVAEFMPNETLSKH 140 (488)
Q Consensus 63 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 140 (488)
+.|+.+.||++...+|..++||+.... ....+.+|+.+++.+.+.+ ++++++++..++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 456679999998777888999997654 2356889999999996544 566888887777899999999998884
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------------
Q 011349 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKG------------------------------------------------ 172 (488)
Q Consensus 141 l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------------ 172 (488)
.. . .+ ...++.+++..|..||+..
T Consensus 104 ~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 31 1 12 2356778888888888642
Q ss_pred ---------CcccccccCCceeecCCCCCeeccCCCcc
Q 011349 173 ---------RALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 173 ---------~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
.++|+|++|.||++++++.+.|+|||.+.
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 18999999999999877667799999864
No 336
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.30 E-value=1.4e-11 Score=120.08 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..++.+|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..|+++++++|+++.+++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 142 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 142 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+|++++|++.|+++++++|+..
T Consensus 143 ~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 143 TNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred HHcCCHHHHHHHHHHHHHhCcCcH
Confidence 999999999999999999999754
No 337
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.3e-11 Score=113.75 Aligned_cols=103 Identities=15% Similarity=0.064 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhc--------------------------cCCCCchHHHhcHHHHHHhhCCHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFID--------------------------GGTMVSPTVFARRCLCYLLSDMPQE 436 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--------------------------~~p~~~~~~~~~~a~~~~~~~~~~~ 436 (488)
+..+...|..+...|++++|+..|+++++ .+|. ...++.++|.++...|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHH
Confidence 67888888888888888888888888888 7777 78899999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 437 ALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 437 A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|+..++++++++|+++.+|+.+|.++..+|++++|++.|+++++++|+..
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 207 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV 207 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHH
Confidence 99999999999999999999999999999999999999999999999753
No 338
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.30 E-value=2.5e-11 Score=109.29 Aligned_cols=104 Identities=14% Similarity=-0.023 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh-CCHHHHHHHHHHHHH--hCCCCHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS-DMPQEALGDAMQAQV--ISPDWPTAFYL 457 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~--l~p~~~~a~~~ 457 (488)
.++..+...|..+...|++++|+..|+++++.+|. +..++.++|.++... |++++|+..++++++ .+|++..+++.
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 118 (225)
T 2vq2_A 40 KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLN 118 (225)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHH
Confidence 44678888888888889999999999999888888 888888888888888 899999999999888 66777888888
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|.++..+|++++|++.|+++++++|+.
T Consensus 119 l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999988888864
No 339
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.30 E-value=7.3e-12 Score=118.86 Aligned_cols=106 Identities=15% Similarity=0.042 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHhc-CChHHHHHHHHHhhccCCCCc-----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH-
Q 011349 381 QETLNSKKRGDAAFRA-KDFPTAIECYTHFIDGGTMVS-----PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT- 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~- 453 (488)
..+..+...|.++... |+|++|+..|++|+++.|.+. ..++.++|.+|..+|+|++|+..|++++++.|++..
T Consensus 115 ~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 3467899999999996 999999999999999887521 467999999999999999999999999999998754
Q ss_pred ------HHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 454 ------AFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 454 ------a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|+++|.++..+|++++|+.+|+++++++|+..
T Consensus 195 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 195 QWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Confidence 689999999999999999999999999999743
No 340
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.29 E-value=6.7e-12 Score=117.03 Aligned_cols=104 Identities=7% Similarity=-0.011 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
.++..+..+|..++..|+|++|+..|+++++ .|. + ..+|.++|.+|..+|++++|+..|+++++++|+++.+|+
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~-~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 112 (272)
T 3u4t_A 35 NSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVN-ATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYG 112 (272)
T ss_dssp CCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSC-TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHH
T ss_pred CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccC-chhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHH
Confidence 4566899999999999999999999999999 443 3 334899999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|.++..+|++++|++.|+++++++|+..
T Consensus 113 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 142 (272)
T 3u4t_A 113 QIGSYFYNKGNFPLAIQYMEKQIRPTTTDP 142 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHGGGCCSSCCCH
T ss_pred HHHHHHHHccCHHHHHHHHHHHhhcCCCcH
Confidence 999999999999999999999999998753
No 341
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.29 E-value=8.8e-12 Score=116.19 Aligned_cols=98 Identities=16% Similarity=0.106 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHH-HHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRC-LCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a-~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
+..+...|..++..|+|++|+..|+++++++|. ++.++.++| .+|.. +++++|+..++++++++|+++.+++.+|.+
T Consensus 108 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 185 (272)
T 3u4t_A 108 LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTT-DPKVFYELGQAYYYN-KEYVKADSSFVKVLELKPNIYIGYLWRARA 185 (272)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCC-CHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCC-cHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 345555555555555555555555555555555 555555555 33332 355555555555555555555555555555
Q ss_pred HHhCCC---hHHHHHHHHHhhccc
Q 011349 462 LFGLGM---NNDAQETLKDGTNLE 482 (488)
Q Consensus 462 ~~~~~~---~~~A~~~~~~al~l~ 482 (488)
+..+|+ +++|+..|++++++.
T Consensus 186 ~~~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 186 NAAQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHcCcchhhHHHHHHHHHHHHHH
Confidence 555555 555555555555443
No 342
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.29 E-value=2e-11 Score=112.47 Aligned_cols=101 Identities=13% Similarity=0.013 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhc--cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFID--GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+..+...|..++..|++++|++.|+++++ .+|. ...++.++|.+|...|++++|+..++++++++|+++.+++.+|.
T Consensus 105 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~ 183 (252)
T 2ho1_A 105 ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPE-RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMAD 183 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 34445555555555555555555555555 4454 45555555555555555555555555555555555555555555
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
++..+|++++|++.|+++++++|+
T Consensus 184 ~~~~~g~~~~A~~~~~~~~~~~~~ 207 (252)
T 2ho1_A 184 LLYKEREYVPARQYYDLFAQGGGQ 207 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTSCC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCcC
Confidence 555555555555555555555553
No 343
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.29 E-value=1.8e-11 Score=112.82 Aligned_cols=104 Identities=12% Similarity=0.048 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHH--hCCCCHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQV--ISPDWPTAFYLQ 458 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--l~p~~~~a~~~~ 458 (488)
..+..+...|..++..|++++|++.|+++++.+|. +..++.++|.+|...|++++|+..++++++ ..|.++.+++.+
T Consensus 69 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l 147 (252)
T 2ho1_A 69 SSADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENL 147 (252)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHH
Confidence 45788999999999999999999999999999999 899999999999999999999999999999 889999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
|.++..+|++++|++.|+++++++|+.
T Consensus 148 a~~~~~~g~~~~A~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 148 GLVSLQMKKPAQAKEYFEKSLRLNRNQ 174 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCccc
Confidence 999999999999999999999998864
No 344
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.28 E-value=1.8e-11 Score=120.66 Aligned_cols=103 Identities=14% Similarity=0.034 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..+...|..+.+.|++++|+..|+++++++|+ +..++.++|.++...|++++|+..++++++++|+++.+++++|.+
T Consensus 270 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 348 (388)
T 1w3b_A 270 FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 348 (388)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 4567778888888888888888888888888887 777888888888888888888888888888888888888888888
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+..+|++++|++.|+++++++|+.
T Consensus 349 ~~~~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 349 LQQQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp HHTTTCCHHHHHHHHHHHTTCTTC
T ss_pred HHHcCCHHHHHHHHHHHHhhCCCC
Confidence 888888888888888888888764
No 345
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.28 E-value=1.5e-11 Score=121.19 Aligned_cols=104 Identities=12% Similarity=0.021 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++..+...|..+...|++++|+..|+++++++|+ .+.+|.++|.++.+.|++++|+..|+++++++|+++.+++.+|.
T Consensus 235 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 313 (388)
T 1w3b_A 235 NHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 313 (388)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS-CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+|++++|++.|+++++++|+.
T Consensus 314 ~~~~~g~~~~A~~~~~~al~~~p~~ 338 (388)
T 1w3b_A 314 IKREQGNIEEAVRLYRKALEVFPEF 338 (388)
T ss_dssp HHHTTTCHHHHHHHHHHHTTSCTTC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999975
No 346
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.28 E-value=2.2e-11 Score=119.23 Aligned_cols=159 Identities=14% Similarity=0.173 Sum_probs=114.8
Q ss_pred cccCHHHHHHHh----cCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEcc--CCC-CCChHHHHHHHHHHhhcC--C
Q 011349 39 REFNLDQLRAAT----SGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFN--RSA-WPDSRQFLEEARAVGLLR--S 109 (488)
Q Consensus 39 ~~~~~~~~~~~~----~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h 109 (488)
..++...+.... .++....-++.++.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.+. +
T Consensus 19 ~~ld~~~l~~~l~~~~~~~~~~~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~ 97 (359)
T 3dxp_A 19 QRFDTEALEAWMRQHVEGFAGPLSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTD 97 (359)
T ss_dssp -CCCHHHHHHHHHHHSTTCCCCCEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSS
T ss_pred cCCCHHHHHHHHHHhCCCCCCCceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCC
Confidence 345555544432 234444456788999999999998754 568888876 332 122457889999999996 4
Q ss_pred CCCcccccceecC---CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------------
Q 011349 110 ERLVNLIGCCCEG---EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------------- 171 (488)
Q Consensus 110 ~niv~~~~~~~~~---~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------------- 171 (488)
..+++++.++.+. +..++||||++|.++.+.. -..++..++..++.++++.|..||+.
T Consensus 98 vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~ 173 (359)
T 3dxp_A 98 VPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGN 173 (359)
T ss_dssp SCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSC
T ss_pred CCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCC
Confidence 5688889888765 4589999999998885432 13478889999999999999999972
Q ss_pred ------------------------------------------CCcccccccCCceeecCCCC--CeeccCCCccc
Q 011349 172 ------------------------------------------GRALYHDLNTYRILFDQDGN--PRLSCFGLMKN 202 (488)
Q Consensus 172 ------------------------------------------~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~ 202 (488)
..++|+|++|.|||++.++. +.|+||+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 174 YFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 12899999999999987653 58999998753
No 347
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.27 E-value=1.8e-11 Score=116.08 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=87.0
Q ss_pred HHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHH-H
Q 011349 393 AFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNND-A 471 (488)
Q Consensus 393 ~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~-A 471 (488)
+...|++++|+..|+++++.+|+ ++.+++++|.++.++|++++|+..++++++++|+++++++++|.++..+|++++ |
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 34569999999999999999999 999999999999999999999999999999999999999999999999999987 5
Q ss_pred HHHHHHhhccccccc
Q 011349 472 QETLKDGTNLEAKKH 486 (488)
Q Consensus 472 ~~~~~~al~l~p~~~ 486 (488)
.++++++++++|+.+
T Consensus 255 ~~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 255 NRYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhCCCCh
Confidence 688899999999864
No 348
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.27 E-value=1.4e-11 Score=119.38 Aligned_cols=99 Identities=12% Similarity=0.022 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..|.++|.++++.|+|++|+..|++|++++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..+++.+|.+
T Consensus 195 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 273 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 3678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHH-HHHHHHhhcc
Q 011349 462 LFGLGMNNDA-QETLKDGTNL 481 (488)
Q Consensus 462 ~~~~~~~~~A-~~~~~~al~l 481 (488)
+..+|++++| .+.|++.++.
T Consensus 274 ~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 274 QQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 5577776643
No 349
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.26 E-value=1.1e-11 Score=117.53 Aligned_cols=106 Identities=8% Similarity=-0.173 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHhh-CCHHHHHHHHHHHHHhCCCC---
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLS-DMPQEALGDAMQAQVISPDW--- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~l~p~~--- 451 (488)
..+.++.+.|.++...|+|++|+.+|++|+++.|.. ...++.++|.+|... |++++|+.+|++|+++.|+.
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 457899999999999999999999999999887641 146899999999996 99999999999999999865
Q ss_pred ---HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 452 ---PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 452 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..++.++|.++..+|+|++|++.|+++++++|+..
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 57899999999999999999999999999998753
No 350
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.26 E-value=5e-11 Score=115.30 Aligned_cols=105 Identities=15% Similarity=0.208 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch----HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
.........|..++..|++++|+..|+++++.+|+ +. .++.++|.++...|++++|+..++++++++|+++.+|+
T Consensus 232 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 310 (359)
T 3ieg_A 232 KKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALK 310 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34445667799999999999999999999999998 66 34677999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|.++..+|++++|++.|+++++++|++.
T Consensus 311 ~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~ 340 (359)
T 3ieg_A 311 DRAEAYLIEEMYDEAIQDYEAAQEHNENDQ 340 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999999999999864
No 351
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.25 E-value=2.5e-11 Score=126.43 Aligned_cols=104 Identities=17% Similarity=0.051 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..++.+|..++..|+|++|++.|++|++++|+ +..++.++|.+|..+|++++|++.|+++++++|+++.+|+++|.
T Consensus 21 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~ 99 (568)
T 2vsy_A 21 QDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGH 99 (568)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+|++++|++.|+++++++|+.
T Consensus 100 ~~~~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 100 ALEDAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999975
No 352
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.25 E-value=3.4e-11 Score=115.05 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..+...|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 5678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+..+|++++|++.|+++++++|+
T Consensus 250 ~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 250 YSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHhccHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999997
No 353
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.25 E-value=1.7e-11 Score=117.39 Aligned_cols=105 Identities=14% Similarity=0.102 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccC---------CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGG---------TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~---------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~ 451 (488)
.++..+...|..++..|++++|+..|+++++.. |. ...++.++|.+|..+|++++|+..++++++++|++
T Consensus 191 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 269 (330)
T 3hym_B 191 EDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQN 269 (330)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred CChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccc
Confidence 456789999999999999999999999999876 55 67899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+|+.+|.++..+|++++|++.|+++++++|++.
T Consensus 270 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 304 (330)
T 3hym_B 270 ASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDT 304 (330)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCch
Confidence 99999999999999999999999999999999754
No 354
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.24 E-value=4.3e-11 Score=107.69 Aligned_cols=100 Identities=12% Similarity=0.019 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHhc-CChHHHHHHHHHhhc--cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRA-KDFPTAIECYTHFID--GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 383 ~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~--~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+..+...|..++.. |++++|+..|+++++ .+|. ...++.++|.++...|++++|+..++++++.+|+++.+++.+|
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 154 (225)
T 2vq2_A 76 AEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELA 154 (225)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHH
Confidence 44555666666666 666666666666666 4444 4555666666666666666666666666666666666666666
Q ss_pred HHHHhCCChHHHHHHHHHhhcccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
.++..+|++++|++.|+++++++|
T Consensus 155 ~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 155 RTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC
Confidence 666666666666666666666655
No 355
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.24 E-value=1.9e-11 Score=111.24 Aligned_cols=102 Identities=16% Similarity=0.069 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchH---HHhcHHHHHHh------------------hCCHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLL------------------SDMPQEALGDA 441 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~---~~~~~a~~~~~------------------~~~~~~A~~~~ 441 (488)
..+++.+|.++++.|+|++|+..|+++++.+|+ ++. +++.+|.++.. .|++++|+..|
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 468899999999999999999999999999998 553 78889999886 57899999999
Q ss_pred HHHHHhCCCCHHHH-----------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 442 MQAQVISPDWPTAF-----------------YLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 442 ~~al~l~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+++++.+|+++.++ +.+|.+|+.+|++++|+..|+++++..|+.
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC
Confidence 99999999998665 678999999999999999999999999875
No 356
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.24 E-value=1.5e-11 Score=101.21 Aligned_cols=70 Identities=10% Similarity=-0.046 Sum_probs=66.8
Q ss_pred chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 417 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+.++.++|.++++.|+|++|+.+|++||+++|+++.+|+++|.+|..+|++++|+++|++|++++|+..
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 5678899999999999999999999999999999999999999999999999999999999999999754
No 357
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.24 E-value=3.6e-11 Score=102.88 Aligned_cols=101 Identities=14% Similarity=0.013 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH-
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA- 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g- 459 (488)
.++..+...|.+++..|+|++|+..|+++++++|. ++.++.++|.++..+|++++|+..++++++++|++..++..++
T Consensus 45 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~ 123 (166)
T 1a17_A 45 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 123 (166)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45788999999999999999999999999999999 9999999999999999999999999999999999999985554
Q ss_pred -HHHHhCCChHHHHHHHHHhhccc
Q 011349 460 -AALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 460 -~~~~~~~~~~~A~~~~~~al~l~ 482 (488)
..+..+|++++|++.+.++..+-
T Consensus 124 ~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 124 CNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccchHHHh
Confidence 45889999999999999887653
No 358
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.23 E-value=6.1e-11 Score=110.43 Aligned_cols=103 Identities=14% Similarity=0.084 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH---------
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP--------- 452 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~--------- 452 (488)
++..+...|..+...|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|++.
T Consensus 76 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 76 MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4567888888888888888888888888888888 888888888888888888888888888888888764
Q ss_pred -------------------------------------------------------------HHHHHHHHHHHhCCChHHH
Q 011349 453 -------------------------------------------------------------TAFYLQAAALFGLGMNNDA 471 (488)
Q Consensus 453 -------------------------------------------------------------~a~~~~g~~~~~~~~~~~A 471 (488)
.+|+.+|.++..+|++++|
T Consensus 155 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 234 (275)
T 1xnf_A 155 EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSA 234 (275)
T ss_dssp HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHH
Confidence 6677888888888888888
Q ss_pred HHHHHHhhcccccc
Q 011349 472 QETLKDGTNLEAKK 485 (488)
Q Consensus 472 ~~~~~~al~l~p~~ 485 (488)
+..|+++++++|+.
T Consensus 235 ~~~~~~al~~~p~~ 248 (275)
T 1xnf_A 235 TALFKLAVANNVHN 248 (275)
T ss_dssp HHHHHHHHTTCCTT
T ss_pred HHHHHHHHhCCchh
Confidence 88888888888854
No 359
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.23 E-value=6e-11 Score=113.34 Aligned_cols=104 Identities=11% Similarity=0.018 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..++.+|..++..|+|++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 98 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 98 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHH
Confidence 4557889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+..+|++++|++.|+++++++|+..
T Consensus 99 ~~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 99 HTNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCccH
Confidence 9999999999999999999999754
No 360
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.23 E-value=4.3e-12 Score=110.58 Aligned_cols=97 Identities=9% Similarity=0.060 Sum_probs=86.5
Q ss_pred HHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHhCCC
Q 011349 389 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA-LFGLGM 467 (488)
Q Consensus 389 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~~~~ 467 (488)
.+..+...|+|++|+..|+++++.+|+ ++.++..+|.+|...|++++|+..|+++++++|+++.+++.+|.+ +...|+
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~ 94 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQ 94 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTT
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCC
Confidence 345567889999999999999999999 999999999999999999999999999999999999999999999 789999
Q ss_pred h--HHHHHHHHHhhccccccc
Q 011349 468 N--NDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 468 ~--~~A~~~~~~al~l~p~~~ 486 (488)
+ ++|+..|+++++++|+..
T Consensus 95 ~~~~~A~~~~~~al~~~p~~~ 115 (177)
T 2e2e_A 95 HMTAQTRAMIDKALALDSNEI 115 (177)
T ss_dssp CCCHHHHHHHHHHHHHCTTCH
T ss_pred cchHHHHHHHHHHHHhCCCcH
Confidence 9 999999999999999753
No 361
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.23 E-value=5.8e-11 Score=113.60 Aligned_cols=103 Identities=16% Similarity=-0.015 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..|...|..+...|++++|+..|+++++.+|+ ...++.++|.+|...|++++|+..++++++++|+++.+++.+|.
T Consensus 123 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 201 (330)
T 3hym_B 123 TYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGV 201 (330)
T ss_dssp TCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 34566777777777777777777777777777777 66777777777777777777777777777777777777777777
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
++..+|++++|++.|++++++.|.
T Consensus 202 ~~~~~~~~~~A~~~~~~a~~~~~~ 225 (330)
T 3hym_B 202 VAFQNGEWKTAEKWFLDALEKIKA 225 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHcccHHHHHHHHHHHHHHhhh
Confidence 777777777777777777777654
No 362
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.23 E-value=1.4e-11 Score=103.36 Aligned_cols=82 Identities=9% Similarity=-0.055 Sum_probs=75.9
Q ss_pred HHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 404 ECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 404 ~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
..|.++++++|+ +...++++|.++...|+|++|+..|+++++++|+++.+|+.+|.++..+|++++|++.|++|++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 578999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 011349 484 KKH 486 (488)
Q Consensus 484 ~~~ 486 (488)
++.
T Consensus 84 ~~~ 86 (142)
T 2xcb_A 84 NEP 86 (142)
T ss_dssp TCT
T ss_pred CCc
Confidence 864
No 363
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.22 E-value=9.3e-12 Score=126.57 Aligned_cols=104 Identities=14% Similarity=0.043 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+..+|.++++.|+|++|++.|++|++++|+ ++.+++++|.+|..+|++++|++.|++|++++|+++.+++.+|.
T Consensus 38 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~ 116 (477)
T 1wao_1 38 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 116 (477)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45789999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred H--HHhCCChHHHHHHHH-----------Hhhcccccc
Q 011349 461 A--LFGLGMNNDAQETLK-----------DGTNLEAKK 485 (488)
Q Consensus 461 ~--~~~~~~~~~A~~~~~-----------~al~l~p~~ 485 (488)
+ +..+|++++|++.++ ++++++|+.
T Consensus 117 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 117 CNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9 889999999999999 888888864
No 364
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.20 E-value=6.9e-11 Score=112.05 Aligned_cols=105 Identities=10% Similarity=-0.074 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHH--HHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRC--LCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
.+...+..+|..+.+.|++++|+..|+++++.+|+ +.......+ ..+...|++++|+..|+++++.+|+++.+|+++
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 45678999999999999999999999999999998 653332222 223345899999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|.++..+|++++|++.|+++++++|++.
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~ 234 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHP 234 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999864
No 365
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.20 E-value=1.3e-10 Score=116.73 Aligned_cols=104 Identities=15% Similarity=0.207 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch----HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
....+...|..++..|++++|+..|+++++++|+ ++ .++.++|.++.++|++++|+..++++++++|+++.+|+.
T Consensus 256 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~ 334 (450)
T 2y4t_A 256 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKD 334 (450)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 3445566799999999999999999999999998 64 478999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|.++..+|++++|++.|+++++++|+..
T Consensus 335 l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 363 (450)
T 2y4t_A 335 RAEAYLIEEMYDEAIQDYETAQEHNENDQ 363 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTSSSCH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCcchH
Confidence 99999999999999999999999999853
No 366
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.16 E-value=1.9e-10 Score=94.26 Aligned_cols=86 Identities=9% Similarity=-0.027 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..++..|++++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|++..+++.+|.
T Consensus 48 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 126 (133)
T 2lni_A 48 KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 126 (133)
T ss_dssp TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 45788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCC
Q 011349 461 ALFGLGM 467 (488)
Q Consensus 461 ~~~~~~~ 467 (488)
++..+|+
T Consensus 127 ~~~~~~~ 133 (133)
T 2lni_A 127 CMMAQYN 133 (133)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9988764
No 367
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.16 E-value=5.4e-11 Score=115.34 Aligned_cols=102 Identities=15% Similarity=0.010 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-H
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA-L 462 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~ 462 (488)
..|+++|.++++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 48899999999999999999999999999999 999999999999999999999999999999999999999999998 4
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
...++.++|.+.|++++..+|+..
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCC
Confidence 556788999999999999999754
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.15 E-value=2.4e-10 Score=118.27 Aligned_cols=105 Identities=5% Similarity=-0.128 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHhcCC----------hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC--CHHHHHHHHHHHHHh
Q 011349 380 IQETLNSKKRGDAAFRAKD----------FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD--MPQEALGDAMQAQVI 447 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~l 447 (488)
.+...+|+.+|.+....|+ |++|+++|+++++.+|+ ++.+|++|+.++.+++ ++++|++++++++++
T Consensus 60 P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~ 138 (567)
T 1dce_A 60 PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEA 138 (567)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh
Confidence 3667899999999999988 99999999999999999 9999999999999999 679999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCC-ChHHHHHHHHHhhcccccc
Q 011349 448 SPDWPTAFYLQAAALFGLG-MNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 448 ~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~p~~ 485 (488)
+|.+..||+.+|.++..+| .+++|+++++++++++|.+
T Consensus 139 d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n 177 (567)
T 1dce_A 139 DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 177 (567)
T ss_dssp CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC
T ss_pred ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999 9999999999999999976
No 369
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.15 E-value=1.4e-10 Score=93.54 Aligned_cols=84 Identities=8% Similarity=-0.088 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
...+.++..+|.+++..|+|++|+..|+++++++|+ ++.+++++|.+|..+|++++|+..+++++++.|+++.......
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 467889999999999999999999999999999999 9999999999999999999999999999999999988765443
Q ss_pred HHHHh
Q 011349 460 AALFG 464 (488)
Q Consensus 460 ~~~~~ 464 (488)
.+...
T Consensus 103 ai~~~ 107 (117)
T 3k9i_A 103 AILFY 107 (117)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 33333
No 370
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.14 E-value=1.2e-10 Score=117.82 Aligned_cols=102 Identities=12% Similarity=-0.007 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccC--------CCCchHHHhcHHHHHHhhC--CHHHHHHHHHHHHHhCCCCH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGG--------TMVSPTVFARRCLCYLLSD--MPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~l~p~~~ 452 (488)
+..|.+.|.+++..|+|++|+..|++++++. +. .+.++.++|.++...| +|++|+.+|++|++++|+++
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~ 172 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE-SPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP 172 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh-hHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH
Confidence 3455666666666666666666666666432 22 3455666665555443 46666666666666666666
Q ss_pred HHHHHHHHHHH---hCCChHHHHHHHHHhhcccccc
Q 011349 453 TAFYLQAAALF---GLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 453 ~a~~~~g~~~~---~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++++.+|.+++ ..+++++|++.|++|++++|+.
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~ 208 (472)
T 4g1t_A 173 EFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDN 208 (472)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcc
Confidence 66666666543 3455566666666666666654
No 371
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.13 E-value=1.9e-10 Score=118.08 Aligned_cols=105 Identities=14% Similarity=0.058 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..+...|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 386 (537)
T 3fp2_A 308 EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAE 386 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 45778999999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|+..
T Consensus 387 ~~~~~g~~~~A~~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 387 ILTDRGDFDTAIKQYDIAKRLEEVQE 412 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHhCCHHHHHHHHHHHHHcCCcch
Confidence 99999999999999999999998754
No 372
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.13 E-value=1.5e-09 Score=102.93 Aligned_cols=104 Identities=8% Similarity=-0.029 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHhcC--ChHHHHHHHHHhhccCCCCchHHHhcHHHHH----Hhh---CCHHHHHHHHHHHHHhCCCC
Q 011349 381 QETLNSKKRGDAAFRAK--DFPTAIECYTHFIDGGTMVSPTVFARRCLCY----LLS---DMPQEALGDAMQAQVISPDW 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~----~~~---~~~~~A~~~~~~al~l~p~~ 451 (488)
+...+|+.+|.+....| ++++|+.+++++|..+|+ +..+|+.|+.++ ..+ ++++++++.++++++.+|.+
T Consensus 65 ~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkn 143 (306)
T 3dra_A 65 SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKN 143 (306)
T ss_dssp TCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCC
Confidence 56789999999999999 999999999999999999 999999999999 777 78999999999999999999
Q ss_pred HHHHHHHHHHHHhCCChH--HHHHHHHHhhcccccc
Q 011349 452 PTAFYLQAAALFGLGMNN--DAQETLKDGTNLEAKK 485 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~--~A~~~~~~al~l~p~~ 485 (488)
..+|+.++.++..+|+++ ++++.++++++.||.+
T Consensus 144 y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N 179 (306)
T 3dra_A 144 HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN 179 (306)
T ss_dssp HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCC
Confidence 999999999999999999 9999999999999975
No 373
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.12 E-value=1.1e-11 Score=118.43 Aligned_cols=183 Identities=15% Similarity=0.091 Sum_probs=123.1
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCC--CcccccceecCC---eeeEEEecC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SER--LVNLIGCCCEGE---ERLLVAEFM 132 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~ 132 (488)
++.++.|..+.||+.. ..+++|+.... .....+.+|+.+|+.+. +.. +++++..+...+ ..|+||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4567899999999763 45889986432 23467899999999984 333 445555443332 358999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG---------------------------------------- 172 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------- 172 (488)
+|.+|.+... ..++..++..++.+++..|..||+..
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988875432 24778888889999999999998610
Q ss_pred -----------------CcccccccCCceeecC--CCCCeeccCCCcccCCCCCccccccCC---CCcccccc-----C-
Q 011349 173 -----------------RALYHDLNTYRILFDQ--DGNPRLSCFGLMKNSRDGKSYSTNLAF---TPPEYLRT-----G- 224 (488)
Q Consensus 173 -----------------~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~t~~y---~aPE~~~~-----~- 224 (488)
.++|+|++|.||++++ +..+.|+||+.+..............+ ..|+.... +
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1699999999999997 456789999988654332111111111 22222111 0
Q ss_pred --------CcccCCceEeehHHHHHHhhCCCCCCc
Q 011349 225 --------RVIPESVVYSFGTLLLDLLSGKHIPPS 251 (488)
Q Consensus 225 --------~~~~~sDv~slG~il~el~tg~~p~~~ 251 (488)
......+.|++|.++|.+.+|..++..
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 011225789999999999999866543
No 374
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.12 E-value=1.2e-10 Score=110.48 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDG------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--- 451 (488)
..+..+...|.++...|+|++|+..|++|++. ++.....+++|+|.+|.++|+|++|+..+++|+++.++.
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 34668999999999999999999999999942 222245689999999999999999999999999987554
Q ss_pred ---HHHHHHHHHHHHhCCC-hHHHHHHHHHhhcccc
Q 011349 452 ---PTAFYLQAAALFGLGM-NNDAQETLKDGTNLEA 483 (488)
Q Consensus 452 ---~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~p 483 (488)
+.+|+++|.++..+|+ +++|+++|++|+++..
T Consensus 233 ~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 8899999999999995 6999999999998743
No 375
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.12 E-value=5.5e-10 Score=90.86 Aligned_cols=88 Identities=16% Similarity=0.035 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..++..|++++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|++..+++.+|.
T Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 122 (131)
T 2vyi_A 44 ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKI 122 (131)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 45778999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhCCChH
Q 011349 461 ALFGLGMNN 469 (488)
Q Consensus 461 ~~~~~~~~~ 469 (488)
++..+|+++
T Consensus 123 ~~~~~~~~~ 131 (131)
T 2vyi_A 123 AELKLREAP 131 (131)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHhcCC
Confidence 999998863
No 376
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.11 E-value=1.5e-10 Score=102.84 Aligned_cols=97 Identities=11% Similarity=0.060 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
...+..+|.+++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 568899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHH-HHHHHhhc
Q 011349 463 FGLGMNNDAQ-ETLKDGTN 480 (488)
Q Consensus 463 ~~~~~~~~A~-~~~~~al~ 480 (488)
..+++++++. ..|.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999888 55555544
No 377
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.11 E-value=1.3e-10 Score=117.41 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..|+++|.++++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|+|++|+.+|++|++++|++..+++.+|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 678999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHH
Q 011349 463 FGLGMNNDAQET 474 (488)
Q Consensus 463 ~~~~~~~~A~~~ 474 (488)
..++++++|...
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998754
No 378
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.10 E-value=9.1e-11 Score=98.85 Aligned_cols=77 Identities=9% Similarity=0.005 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhcc-------CCCCchHHH----hcHHHHHHhhCCHHHHHHHHHHHHHhCCC
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDG-------GTMVSPTVF----ARRCLCYLLSDMPQEALGDAMQAQVISPD 450 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-------~p~~~~~~~----~~~a~~~~~~~~~~~A~~~~~~al~l~p~ 450 (488)
++..|.++|.++.+.|+|++|+.+|++||++ +|+ +..+| +++|.++..+|++++|+.+|++|++++|+
T Consensus 56 ~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 56 DAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 4569999999999999999999999999999 999 99999 99999999999999999999999999999
Q ss_pred CHHHHHHHH
Q 011349 451 WPTAFYLQA 459 (488)
Q Consensus 451 ~~~a~~~~g 459 (488)
+...+-.+.
T Consensus 135 d~~~~~~~~ 143 (159)
T 2hr2_A 135 RKGETPGKE 143 (159)
T ss_dssp CCSCCTTHH
T ss_pred cHHHHHHHH
Confidence 865544433
No 379
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.10 E-value=1.9e-10 Score=98.77 Aligned_cols=83 Identities=8% Similarity=-0.124 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..|+.+|.+++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+.+|+++++++|++..+|+++|.
T Consensus 43 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l 121 (164)
T 3sz7_A 43 ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGL 121 (164)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 46789999999999999999999999999999999 99999999999999999999999999999999999999999988
Q ss_pred HHHh
Q 011349 461 ALFG 464 (488)
Q Consensus 461 ~~~~ 464 (488)
+...
T Consensus 122 ~~~~ 125 (164)
T 3sz7_A 122 ETTK 125 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 380
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.10 E-value=3.1e-10 Score=108.37 Aligned_cols=104 Identities=10% Similarity=-0.023 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchH-HHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT-VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+.+..|...|..+.+.|++++|+..|+++++++|. ++. +|.++|.++...|++++|+..|++|++++|....+|...|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a 175 (308)
T 2ond_A 97 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAA 175 (308)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 34456666666666666666666666666666666 544 6666666666666666666666666666666666665554
Q ss_pred HHHH-hCCChHHHHHHHHHhhcccccc
Q 011349 460 AALF-GLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 460 ~~~~-~~~~~~~A~~~~~~al~l~p~~ 485 (488)
...+ .+|++++|++.|++|++++|+.
T Consensus 176 ~~~~~~~~~~~~A~~~~~~al~~~p~~ 202 (308)
T 2ond_A 176 LMEYYCSKDKSVAFKIFELGLKKYGDI 202 (308)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 4433 2566666666666666666653
No 381
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.10 E-value=3.4e-10 Score=118.06 Aligned_cols=105 Identities=16% Similarity=0.116 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhcc------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDG------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
++..|...|..+.+.|++++|++.|+++++. +|+....+|.++|.+|.+.|++++|++.++++++++|+++.+|
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 553 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVH 553 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 4677889999999999999999999999987 6652277899999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 456 YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 456 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+|.+|..+|++++|++.|+++++++|++.
T Consensus 554 ~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~ 584 (597)
T 2xpi_A 554 TAIALVYLHKKIPGLAITHLHESLAISPNEI 584 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999999999999763
No 382
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.10 E-value=2.8e-10 Score=90.27 Aligned_cols=69 Identities=17% Similarity=0.133 Sum_probs=66.5
Q ss_pred chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 417 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+.++|.++...|+|++|+..|+++++++|+++.+|+++|.++..+|++++|++.|+++++++|+.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 567889999999999999999999999999999999999999999999999999999999999999986
No 383
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.10 E-value=1.3e-10 Score=108.38 Aligned_cols=104 Identities=11% Similarity=-0.048 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc--------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh----
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 447 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 447 (488)
...+..+...|..+...|++++|+..|.+++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 456789999999999999999999999999987 466 7889999999999999999999999999999
Q ss_pred ----CCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 448 ----SPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 448 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.|....+++++|.++..+|++++|++.|++++++.|+
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999988654
No 384
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.10 E-value=1.8e-10 Score=109.98 Aligned_cols=104 Identities=9% Similarity=0.008 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 451 (488)
..+..+.+.|.++.. |+|++|+..|++|+++.|.. ...++.++|.+|..+|+|++|+..|++++++.|++
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 456788999999999 99999999999999887641 15689999999999999999999999999997755
Q ss_pred --HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 452 --PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 452 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+++++|.++..+|++++|+.+|++++ ++|+..
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 3588999999999999999999999999 999753
No 385
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.09 E-value=1.7e-10 Score=97.03 Aligned_cols=75 Identities=15% Similarity=-0.042 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHHHHhcCCh----------HHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC-----------CHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDF----------PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-----------MPQEA 437 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----------~~~~A 437 (488)
..+++.+|.+.|.++.+.+++ ++|+..|++||+++|+ ...+|+++|.+|..+| ++++|
T Consensus 32 ~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA 110 (158)
T 1zu2_A 32 NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLA 110 (158)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHHH
Confidence 346788999999999999876 5999999999999999 9999999999999885 89999
Q ss_pred HHHHHHHHHhCCCCHHH
Q 011349 438 LGDAMQAQVISPDWPTA 454 (488)
Q Consensus 438 ~~~~~~al~l~p~~~~a 454 (488)
+++|++|++++|++...
T Consensus 111 ~~~~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 111 TQFFQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhCCCCHHH
Confidence 99999999999998644
No 386
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.09 E-value=1.3e-10 Score=99.64 Aligned_cols=88 Identities=10% Similarity=-0.051 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH-HHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP-TAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-~a~~~~g 459 (488)
..+..|.++|.+++..|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++ .+...++
T Consensus 61 ~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~ 139 (162)
T 3rkv_A 61 KNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMK 139 (162)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 999999999999999999999999999999999998 5677777
Q ss_pred HHHHhCCChH
Q 011349 460 AALFGLGMNN 469 (488)
Q Consensus 460 ~~~~~~~~~~ 469 (488)
.+...++++.
T Consensus 140 ~~~~~~~~~~ 149 (162)
T 3rkv_A 140 IVTERRAEKK 149 (162)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 7766554443
No 387
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.09 E-value=4.2e-10 Score=97.92 Aligned_cols=85 Identities=9% Similarity=-0.030 Sum_probs=78.8
Q ss_pred hcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHhCCChHHHH
Q 011349 395 RAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQAAALFGLGMNNDAQ 472 (488)
Q Consensus 395 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~~~~~~A~ 472 (488)
..++..+|+..|+++++.+|+ ++.+++++|.++...|++++|+..|+++++++|++ +.+++++|.++..+|++++|+
T Consensus 86 ~~~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 86 QQAAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp HHHTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHH
T ss_pred hhcccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHH
Confidence 334556789999999999999 99999999999999999999999999999999987 669999999999999999999
Q ss_pred HHHHHhhc
Q 011349 473 ETLKDGTN 480 (488)
Q Consensus 473 ~~~~~al~ 480 (488)
..|+++|.
T Consensus 165 ~~y~~al~ 172 (176)
T 2r5s_A 165 SKYRRQLY 172 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999974
No 388
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.09 E-value=3.2e-10 Score=92.58 Aligned_cols=84 Identities=15% Similarity=0.059 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC------CCCHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS------PDWPTA 454 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~------p~~~~a 454 (488)
.++..|..+|.+++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+.+|+++++++ |++..+
T Consensus 36 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 36 EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred CChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 45789999999999999999999999999999999 99999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhC
Q 011349 455 FYLQAAALFGL 465 (488)
Q Consensus 455 ~~~~g~~~~~~ 465 (488)
+..++.+...+
T Consensus 115 ~~~l~~~~~~l 125 (126)
T 3upv_A 115 DQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99998887654
No 389
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.09 E-value=2.1e-10 Score=106.80 Aligned_cols=101 Identities=10% Similarity=-0.028 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc--------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh----
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 447 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 447 (488)
...+..+...|..++..|+|++|+..|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999977 355 6788999999999999999999999999998
Q ss_pred ----CCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 448 ----SPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 448 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
+|....+++++|.++..+|++++|++.|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999988
No 390
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.08 E-value=1.5e-10 Score=119.77 Aligned_cols=107 Identities=10% Similarity=0.044 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC-CHHHHHHHHHHHHHhCCCCHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAK--DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-MPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
..++..+|+.+|.+..+.+ +|++|+++++++++++|+ +..+|++|+.++..+| .+++|+++++++|+++|++..||
T Consensus 103 ~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW 181 (567)
T 1dce_A 103 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSW 181 (567)
T ss_dssp CTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHH
Confidence 3477889999999999999 779999999999999999 9999999999999999 89999999999999999999999
Q ss_pred HHHHHHHHhC--------------CChHHHHHHHHHhhccccccc
Q 011349 456 YLQAAALFGL--------------GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 456 ~~~g~~~~~~--------------~~~~~A~~~~~~al~l~p~~~ 486 (488)
+++|.++..+ +++++|++++++|++++|++.
T Consensus 182 ~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~ 226 (567)
T 1dce_A 182 HYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 226 (567)
T ss_dssp HHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred HHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCc
Confidence 9999999886 568999999999999999864
No 391
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.08 E-value=3.2e-10 Score=107.48 Aligned_cols=101 Identities=12% Similarity=0.090 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhh---ccCCCCch----HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC----
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFI---DGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVISPD---- 450 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai---~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~---- 450 (488)
.+.++...|..++..|+|++|+..|++|+ +..|+ .. .+++|+|.+|..+|+|++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 46789999999999999999999999999 44554 32 68999999999999999999999999988644
Q ss_pred --CHHHHHHHHHHHHhCCChHHH-HHHHHHhhcccc
Q 011349 451 --WPTAFYLQAAALFGLGMNNDA-QETLKDGTNLEA 483 (488)
Q Consensus 451 --~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l~p 483 (488)
.+.+|+++|.++..+|++++| ..+|++|+.+..
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 278999999999999999999 788999987643
No 392
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.07 E-value=2.5e-10 Score=96.56 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC------H
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW------P 452 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~------~ 452 (488)
..+...|..++..|+|++|+..|++++++.+.. ...++.++|.++..+|++++|+..+++++++.+.. +
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 477888888888888888888888888764431 14567888888888888888888888888775443 4
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 453 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 453 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+++.+|.++..+|++++|++.+++++++..+
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 57888888888888888888888888877654
No 393
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.07 E-value=4.5e-10 Score=110.15 Aligned_cols=94 Identities=14% Similarity=0.095 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
...+..|.++|.++++.|+|++|+..|++|++++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++
T Consensus 270 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~ 348 (370)
T 1ihg_A 270 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELL 348 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHH
Q 011349 460 AALFGLGMNNDAQET 474 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~ 474 (488)
.++..++++++|...
T Consensus 349 ~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 349 KVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988754
No 394
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.07 E-value=3.9e-10 Score=85.91 Aligned_cols=74 Identities=18% Similarity=0.174 Sum_probs=67.9
Q ss_pred CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 413 GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 413 ~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|.....+++++|.++...|++++|+..|+++++++|+++.+++++|.++..+|++++|++.|+++++++|+..
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 77 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH
Confidence 44436788999999999999999999999999999999999999999999999999999999999999999753
No 395
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.07 E-value=1.2e-09 Score=103.51 Aligned_cols=103 Identities=9% Similarity=-0.027 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHhhCCHHHHHHHHHHHH---HhCCCCH-
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQ---VISPDWP- 452 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al---~l~p~~~- 452 (488)
....++..|..+...|+|++|+..|++|++..+.. ...+++++|.+|..+|+|++|+..|++|+ +..|++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~ 193 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcccc
Confidence 34556778999999999999999999999865541 15689999999999999999999999999 5567643
Q ss_pred ---HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 453 ---TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 453 ---~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+++++|.+|..+|+|++|++.|++|+++.++
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999999998754
No 396
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.06 E-value=5.5e-10 Score=105.74 Aligned_cols=104 Identities=11% Similarity=-0.018 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc--------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh----
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 447 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 447 (488)
...+..+...|..++..|++++|+..|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 456788999999999999999999999999987 666 7788999999999999999999999999984
Q ss_pred ---------------------------------------------CCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccc
Q 011349 448 ---------------------------------------------SPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 448 ---------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 482 (488)
+|..+.+++.+|.+|..+|++++|++.|++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57778999999999999999999999999999998
Q ss_pred cc
Q 011349 483 AK 484 (488)
Q Consensus 483 p~ 484 (488)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 85
No 397
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.05 E-value=4.2e-10 Score=88.06 Aligned_cols=83 Identities=7% Similarity=0.075 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC--HHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQ 458 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~ 458 (488)
+++..++.+|.+++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|++.|++++++.|+. ..+...+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l 83 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSEL 83 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999998754 3333444
Q ss_pred HHHHHh
Q 011349 459 AAALFG 464 (488)
Q Consensus 459 g~~~~~ 464 (488)
...+..
T Consensus 84 ~~~l~~ 89 (100)
T 3ma5_A 84 QDAKLK 89 (100)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 398
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.05 E-value=2.9e-10 Score=115.90 Aligned_cols=105 Identities=12% Similarity=0.013 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchH------HHhcHHHHHHh---hCCHHHHHHHHHHHHHhCCCC
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT------VFARRCLCYLL---SDMPQEALGDAMQAQVISPDW 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~a~~~~~---~~~~~~A~~~~~~al~l~p~~ 451 (488)
.++..+...|..++..|++++|+..|+++++.+|+ +.. ++.++|.++.. .|++++|+..++++++++|++
T Consensus 370 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 448 (514)
T 2gw1_A 370 EAPEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRS 448 (514)
T ss_dssp TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCccc
Confidence 34678889999999999999999999999999888 644 89999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+++.+|.++..+|++++|++.|+++++++|+..
T Consensus 449 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 483 (514)
T 2gw1_A 449 EQAKIGLAQMKLQQEDIDEAITLFEESADLARTME 483 (514)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccH
Confidence 99999999999999999999999999999999753
No 399
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.05 E-value=7.5e-10 Score=105.70 Aligned_cols=101 Identities=12% Similarity=-0.023 Sum_probs=91.7
Q ss_pred HH-HHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHH-hhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 383 TL-NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYL-LSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 383 ~~-~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+. .|...|..+.+.|++++|+..|++|++.+|. ...+|...+.... ..|++++|+..|+++++++|+++.+|..+|.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 211 (308)
T 2ond_A 133 PTLVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYID 211 (308)
T ss_dssp THHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 44 8999999999999999999999999999998 7888876665543 3799999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcc---ccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNL---EAK 484 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l---~p~ 484 (488)
.+..+|++++|+..|++|++. +|+
T Consensus 212 ~~~~~g~~~~A~~~~~~al~~~~l~p~ 238 (308)
T 2ond_A 212 YLSHLNEDNNTRVLFERVLTSGSLPPE 238 (308)
T ss_dssp HHHTTCCHHHHHHHHHHHHHSSSSCGG
T ss_pred HHHHCCCHHHHHHHHHHHHhccCCCHH
Confidence 999999999999999999995 664
No 400
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.04 E-value=2e-10 Score=109.71 Aligned_cols=104 Identities=10% Similarity=-0.044 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC-----CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM-----VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 451 (488)
..+..+.+.|.++...|+|++|+.+|++|+++.+. ....++.++|.+|.. |++++|+.+|++|+++.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 45778999999999999999999999999987432 124688999999999 99999999999999998764
Q ss_pred --HHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 452 --PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 452 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
..+++++|.+|..+|+|++|++.|++++++.|+.
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999987754
No 401
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.03 E-value=8.7e-10 Score=102.32 Aligned_cols=103 Identities=10% Similarity=-0.105 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC-CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC--CC-CHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM-VSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS--PD-WPTAFY 456 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~--p~-~~~a~~ 456 (488)
.+. ..+.+|..+++.++|++|+..|++++...+. ....+++++|.++..+|++++|+..|++++.-. |. .+++++
T Consensus 134 ~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~ 212 (282)
T 4f3v_A 134 EHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAW 212 (282)
T ss_dssp HHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHH
T ss_pred chH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 445 8899999999999999999999999886432 114589999999999999999999999999655 66 678999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
++|.++..+|+.++|.+.|++++..+|+
T Consensus 213 ~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 213 YLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999997
No 402
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.03 E-value=7.8e-10 Score=104.82 Aligned_cols=106 Identities=10% Similarity=-0.058 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHH----Hhc---CChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHH--HHHHHHHHHHHhCCC
Q 011349 380 IQETLNSKKRGDAA----FRA---KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQ--EALGDAMQAQVISPD 450 (488)
Q Consensus 380 ~~~~~~~~~~g~~~----~~~---~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~--~A~~~~~~al~l~p~ 450 (488)
.+...+|+.++.+. ... +++++++++++++++.+|+ +..+|++|+.++..+|.++ ++++.++++|+.+|.
T Consensus 100 Pk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~ 178 (306)
T 3dra_A 100 EKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK 178 (306)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT
T ss_pred cccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC
Confidence 35667888888888 666 7899999999999999999 9999999999999999998 999999999999999
Q ss_pred CHHHHHHHHHHHHhCCC------hHHHHHHHHHhhccccccc
Q 011349 451 WPTAFYLQAAALFGLGM------NNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 451 ~~~a~~~~g~~~~~~~~------~~~A~~~~~~al~l~p~~~ 486 (488)
|..||+.++.++..+++ ++++++++++++.++|++.
T Consensus 179 N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~ 220 (306)
T 3dra_A 179 NNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNP 220 (306)
T ss_dssp CHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCH
T ss_pred CHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999998 9999999999999999863
No 403
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.02 E-value=5.6e-10 Score=109.91 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=94.4
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHhhCCHHHHHHHHHHHHH-----hC
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQV-----IS 448 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----l~ 448 (488)
....+..+...|.++...|+|++|+..|++|+++.+.. ...++.++|.+|..+|++++|+.++++|++ .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 34557789999999999999999999999999875531 225899999999999999999999999999 46
Q ss_pred -CCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 449 -PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 449 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
|..+.+++++|.++..+|++++|++.|++|+++.++
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999998553
No 404
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.02 E-value=4.9e-10 Score=106.13 Aligned_cols=103 Identities=8% Similarity=-0.062 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc-----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-------CCC
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS-----PTVFARRCLCYLLSDMPQEALGDAMQAQVI-------SPD 450 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-------~p~ 450 (488)
+..++..|..+...++|++|+..|++|+++.+... ..+++++|.+|..+|+|++|+..|++|+++ .+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 33455689999999999999999999998654412 237999999999999999999999999953 234
Q ss_pred CHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 451 WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 451 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+.+++++|.+|..+|+|++|++.+++|+++.++.
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 46689999999999999999999999999987654
No 405
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.01 E-value=5.7e-10 Score=90.73 Aligned_cols=68 Identities=15% Similarity=-0.056 Sum_probs=64.6
Q ss_pred HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 419 TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 419 ~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..++.+|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|++|++++|+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 85 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI 85 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 35778999999999999999999999999999999999999999999999999999999999999853
No 406
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.01 E-value=2.1e-09 Score=100.33 Aligned_cols=99 Identities=14% Similarity=0.067 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHh----cCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCC
Q 011349 380 IQETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDW 451 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~ 451 (488)
..++.+++..|..+.. .+++++|+..|++|++.+ ++.+++++|.+|.. .+++++|+..|++|+++ ++
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~ 109 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KY 109 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TC
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CC
Confidence 3567889999999999 999999999999999874 67788999999999 99999999999999998 48
Q ss_pred HHHHHHHHHHHHh----CCChHHHHHHHHHhhcccc
Q 011349 452 PTAFYLQAAALFG----LGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 452 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~p 483 (488)
+.+++++|.+|.. .+++++|++.|++|+++++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 9999999999999 9999999999999998764
No 407
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.01 E-value=8.9e-10 Score=105.12 Aligned_cols=107 Identities=10% Similarity=0.051 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCC-HHHHHHHHHHHHHhCCCCHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAK--DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM-PQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~ 455 (488)
..++..+|..++.+....+ ++++++.+++++++.+|. +..+|++|+.+...+|. +++++++++++|+.+|.|..||
T Consensus 104 ~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW 182 (331)
T 3dss_A 104 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSW 182 (331)
T ss_dssp CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHH
Confidence 4477889999999999998 499999999999999999 99999999999999999 6999999999999999999999
Q ss_pred HHHHHHHHhC--------------CChHHHHHHHHHhhccccccc
Q 011349 456 YLQAAALFGL--------------GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 456 ~~~g~~~~~~--------------~~~~~A~~~~~~al~l~p~~~ 486 (488)
++++.++..+ +.++++++++++|+.++|++.
T Consensus 183 ~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 183 HYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 9999999887 568999999999999999864
No 408
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.01 E-value=1.1e-09 Score=86.41 Aligned_cols=72 Identities=13% Similarity=0.094 Sum_probs=69.4
Q ss_pred cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 412 GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 412 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
++|+ ++.++.++|.++...|++++|+..++++++++|+++.+++++|.++..+|++++|++.|+++++++|+
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4677 88899999999999999999999999999999999999999999999999999999999999999997
No 409
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.00 E-value=1.7e-09 Score=112.74 Aligned_cols=102 Identities=10% Similarity=-0.142 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.+...|...|..+.+.|++++|++.|+++++.+|+ +..+|+.+|.+|.+.|++++|++.|+++++++|+++.+|+.+|.
T Consensus 405 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 483 (597)
T 2xpi_A 405 QFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGV 483 (597)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 35678999999999999999999999999999998 88999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p 483 (488)
++...|++++|++.|++++++.|
T Consensus 484 ~~~~~g~~~~A~~~~~~~~~~~~ 506 (597)
T 2xpi_A 484 VAFNKSDMQTAINHFQNALLLVK 506 (597)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhhh
Confidence 99999999999999999998844
No 410
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.99 E-value=3.4e-10 Score=106.67 Aligned_cols=102 Identities=9% Similarity=-0.014 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH-----HHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP-----TAF 455 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-----~a~ 455 (488)
.++..++.+|.+++..|+|++|+..|++|++++|+ +..+++++|.+|..+|++++|+..|+++++++|+++ .++
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~ 114 (281)
T 2c2l_A 36 LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIP 114 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHH
Confidence 46789999999999999999999999999999999 999999999999999999999999999999998762 111
Q ss_pred --------------------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 456 --------------------------YLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 456 --------------------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
..++. +..|++++|++.|++|++++|++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~ 168 (281)
T 2c2l_A 115 SALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDD 168 (281)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccch
Confidence 11122 23689999999999999999974
No 411
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.99 E-value=1.1e-09 Score=107.76 Aligned_cols=104 Identities=12% Similarity=0.029 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCC-----CCchHHHhcHHHHHHhhCCHHHHHHHHHHHHH-----hCCC
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGT-----MVSPTVFARRCLCYLLSDMPQEALGDAMQAQV-----ISPD 450 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----l~p~ 450 (488)
..+..+...|.++...|+|++|++.|++|+++.+ .....+++++|.+|..+|++++|+..+++|++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 4578899999999999999999999999998632 11346899999999999999999999999999 8898
Q ss_pred CHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 451 WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 451 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+.+++++|.++..+|++++|++.|++|+++.++
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998654
No 412
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.99 E-value=7.7e-10 Score=97.97 Aligned_cols=106 Identities=12% Similarity=-0.049 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc---CCC---CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC--
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG---GTM---VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD-- 450 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~-- 450 (488)
....+..+...|..+...|++++|+..|++++++ .++ ....++.++|.++..+|++++|+..+++++++.+.
T Consensus 62 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 141 (203)
T 3gw4_A 62 HTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD 141 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc
Confidence 3456778889999999999999999999999877 332 13567888999999999999999999999876432
Q ss_pred C----HHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 451 W----PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 451 ~----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+ ..++.++|.++..+|++++|++.|++|+++-.+
T Consensus 142 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 142 DQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 2 235688899999999999999999999887554
No 413
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.99 E-value=1.1e-09 Score=108.49 Aligned_cols=102 Identities=13% Similarity=0.088 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch----HHHhcHHHHHHhhCCHHHHHHHHHHHHHh------CCC
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVI------SPD 450 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~ 450 (488)
..+..+..+|..++..|+|++|+..|+++++++|+ +. .++.++|.+|..+|++++|+..+++++++ .|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 55678889999999999999999999999999998 65 58999999999999999999999999999 688
Q ss_pred CHHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 451 WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 451 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
.+.+++.+|.++..+|++++|++.|++++++.+
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 157 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLAR 157 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999998843
No 414
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.98 E-value=1.4e-09 Score=103.74 Aligned_cols=103 Identities=13% Similarity=0.099 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHh------CCCC
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVI------SPDW 451 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~~ 451 (488)
....+...|..++..|+|++|+..|+++++.+|+ + ..++.++|.+|...|++++|+..+++++++ .|..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 3567888999999999999999999999999998 6 468889999999999999999999999988 5667
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+.+++.+|.++..+|++++|++.|++++++.|+.
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999987753
No 415
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.98 E-value=2.4e-09 Score=101.20 Aligned_cols=102 Identities=10% Similarity=-0.030 Sum_probs=93.4
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc--------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC--
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS-- 448 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~-- 448 (488)
....+..+...|..++..|++++|+..|++++++ .|. ...++.++|.+|..+|++++|+..+++++++.
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999999987 354 67889999999999999999999999999984
Q ss_pred ------CCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 449 ------PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 449 ------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
|....+++++|.++..+|++++|++.|++++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 677889999999999999999999999999987
No 416
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.98 E-value=1.1e-09 Score=92.60 Aligned_cols=105 Identities=8% Similarity=0.011 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc-----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS-----PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--- 451 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--- 451 (488)
...+..+...|..++..|+|++|+..|++++++.+... ..++.++|.+|..+|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 45677899999999999999999999999998744311 2578999999999999999999999999987654
Q ss_pred ---HHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 452 ---PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 452 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
..+++++|.++..+|++++|++.+++++++.+.
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999987543
No 417
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.97 E-value=1.3e-09 Score=110.13 Aligned_cols=103 Identities=12% Similarity=0.014 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh-------------------CCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS-------------------DMPQEALGDA 441 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-------------------~~~~~A~~~~ 441 (488)
..+..+...|..+...|++++|+..|++|++.+|+ ++.++.++|.+|... +.+++|+..+
T Consensus 245 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 323 (472)
T 4g1t_A 245 GVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHL 323 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHH
Confidence 45667888999999999999999999999999998 888888888887543 3467788888
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 442 MQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 442 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+++++++|+++.+++.+|.++..+|++++|++.|++|++++|+
T Consensus 324 ~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~ 366 (472)
T 4g1t_A 324 KKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELT 366 (472)
T ss_dssp HHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC
T ss_pred HHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 8888888888888888888888888888888888888887765
No 418
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.97 E-value=8.2e-10 Score=108.73 Aligned_cols=103 Identities=10% Similarity=-0.022 Sum_probs=91.7
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC------chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV------SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 452 (488)
....+..++..|..++..|++++|+..|++|+++.+.. ...+++++|.+|..+|++++|+..+++|+++.|...
T Consensus 139 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 218 (383)
T 3ulq_A 139 RIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK 218 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 44578899999999999999999999999999874431 346899999999999999999999999999866543
Q ss_pred ------HHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 453 ------TAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 453 ------~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
.+++++|.++..+|++++|+++|++|+++
T Consensus 219 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 253 (383)
T 3ulq_A 219 QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAV 253 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 58999999999999999999999999995
No 419
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.97 E-value=1.4e-09 Score=107.21 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHh------CCCCH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVI------SPDWP 452 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~~~ 452 (488)
+..+..+|..++..|+|++|+..|+++++++|. + ..++.++|.+|...|++++|+..+++++++ .|..+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 567889999999999999999999999999998 5 368999999999999999999999999988 56668
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 453 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 453 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+++.+|.++..+|++++|++.|++++++.|+.
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999987754
No 420
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.96 E-value=1.8e-09 Score=102.03 Aligned_cols=97 Identities=8% Similarity=-0.066 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC--HHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQAA 460 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~ 460 (488)
.......+..+.+.+++++|+..|+++++.+|+ +..+++++|.+|...|++++|+..|.++++++|++ ..++.++|.
T Consensus 185 ~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~ 263 (287)
T 3qou_A 185 RYQGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQE 263 (287)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHH
Confidence 345566777788999999999999999999999 99999999999999999999999999999999999 999999999
Q ss_pred HHHhCCChHHHHHHHHHhhc
Q 011349 461 ALFGLGMNNDAQETLKDGTN 480 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~ 480 (488)
++..+|+.++|...|++++.
T Consensus 264 ~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 264 ILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHcCCCCcHHHHHHHHHH
Confidence 99999999999999999985
No 421
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.96 E-value=4.2e-09 Score=100.96 Aligned_cols=106 Identities=8% Similarity=-0.045 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh-C-CHHHHHHHHHHHHHhCCCCHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAK-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS-D-MPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-~-~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
..+...+|..++.+....| ++++|+.+++++|+.+|+ +..+|+.|+.++..+ + +++++++.++++++++|.|..||
T Consensus 84 nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW 162 (349)
T 3q7a_A 84 NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTW 162 (349)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHH
T ss_pred CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHH
Confidence 3366789999999999999 599999999999999999 999999999999998 8 89999999999999999999999
Q ss_pred HHHHHHHHhCCChH--------HHHHHHHHhhcccccc
Q 011349 456 YLQAAALFGLGMNN--------DAQETLKDGTNLEAKK 485 (488)
Q Consensus 456 ~~~g~~~~~~~~~~--------~A~~~~~~al~l~p~~ 485 (488)
+.++.++..+|+++ ++++.++++++.||.+
T Consensus 163 ~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 163 AYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 99999999999998 9999999999999975
No 422
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.95 E-value=5.7e-09 Score=99.54 Aligned_cols=105 Identities=5% Similarity=-0.119 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHhcCC----------hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCC--HHHHHHHHHHHHHhC
Q 011349 381 QETLNSKKRGDAAFRAKD----------FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM--PQEALGDAMQAQVIS 448 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al~l~ 448 (488)
+...+|..++.+....++ +++++.++++++..+|+ ++.+|+.|+.++..+++ ++++++.++++++++
T Consensus 62 ~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~d 140 (331)
T 3dss_A 62 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEAD 140 (331)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhC
Confidence 667889999998887766 79999999999999999 99999999999999994 899999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCC-hHHHHHHHHHhhccccccc
Q 011349 449 PDWPTAFYLQAAALFGLGM-NNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 449 p~~~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~p~~~ 486 (488)
|.|..||+.++.++..+|. +++++++++++++.+|.+.
T Consensus 141 prNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 141 ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCH
T ss_pred CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999 5999999999999999763
No 423
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.95 E-value=3.7e-09 Score=85.04 Aligned_cols=85 Identities=18% Similarity=0.140 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..++..|++++|+..|+++++.+|. +..++.++|.+|...|++++|+..++++++++|+++.++..+|.
T Consensus 41 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 119 (125)
T 1na0_A 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 119 (125)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34678899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhCC
Q 011349 461 ALFGLG 466 (488)
Q Consensus 461 ~~~~~~ 466 (488)
++..+|
T Consensus 120 ~~~~~g 125 (125)
T 1na0_A 120 AKQKQG 125 (125)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 987654
No 424
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.95 E-value=1.6e-09 Score=84.25 Aligned_cols=66 Identities=17% Similarity=0.098 Sum_probs=62.9
Q ss_pred HhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 421 FARRCLCYLLSDMPQEALGDAMQAQVISPDWPT-AFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 421 ~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+++|.++...|++++|+..|+++++++|+++. +|+++|.++..+|++++|++.|+++++++|+..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 357899999999999999999999999999999 999999999999999999999999999999864
No 425
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.94 E-value=1.9e-09 Score=103.33 Aligned_cols=107 Identities=10% Similarity=-0.116 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHHHHHhc-C-ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHH--------HHHHHHHHHHHhC
Q 011349 379 QIQETLNSKKRGDAAFRA-K-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQ--------EALGDAMQAQVIS 448 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~-~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~--------~A~~~~~~al~l~ 448 (488)
..++..+|..++.+.... + ++++++++++++++.+|+ +..+|+.|+.++..++.++ ++++.++++|+.+
T Consensus 119 nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpk-Ny~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~d 197 (349)
T 3q7a_A 119 NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPK-NYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVD 197 (349)
T ss_dssp TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTT-CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhC
Confidence 346778999999999988 8 999999999999999999 9999999999999999988 9999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCC-------hHHHHHHHHHhhccccccc
Q 011349 449 PDWPTAFYLQAAALFGLGM-------NNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 449 p~~~~a~~~~g~~~~~~~~-------~~~A~~~~~~al~l~p~~~ 486 (488)
|.|..||++++.++..+++ ++++++++++++.++|++.
T Consensus 198 p~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~ 242 (349)
T 3q7a_A 198 GRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNV 242 (349)
T ss_dssp TTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred CCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999997 7999999999999999863
No 426
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.94 E-value=4.4e-09 Score=83.71 Aligned_cols=82 Identities=12% Similarity=-0.030 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|+++.++..++.
T Consensus 36 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 114 (118)
T 1elw_A 36 HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQN 114 (118)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999999999999999988
Q ss_pred HHH
Q 011349 461 ALF 463 (488)
Q Consensus 461 ~~~ 463 (488)
+..
T Consensus 115 ~~~ 117 (118)
T 1elw_A 115 MEA 117 (118)
T ss_dssp HHH
T ss_pred hhc
Confidence 753
No 427
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.93 E-value=3.1e-09 Score=87.73 Aligned_cols=75 Identities=11% Similarity=0.010 Sum_probs=69.1
Q ss_pred ccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 411 DGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 411 ~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+|. .+..+.++|.++...|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+..|+++++++|+..
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV 77 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH
Confidence 34666 8889999999999999999999999999999999999999999999999999999999999999999753
No 428
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.93 E-value=4.9e-09 Score=80.55 Aligned_cols=72 Identities=17% Similarity=-0.008 Sum_probs=65.4
Q ss_pred CCCCchHHHhcHHHHHHhhCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 413 GTMVSPTVFARRCLCYLLSDM---PQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 413 ~p~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|+ ++.++..+|.+++..++ .++|...+++|++++|+++.+++.+|..++..|+|++|+..|+++++.+|+.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 577 88999999999876655 7999999999999999999999999999999999999999999999999973
No 429
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=2.1e-08 Score=83.53 Aligned_cols=81 Identities=11% Similarity=0.015 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..+...|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 788999999999999999999999999999999 8999999999999999999999999999999999999998888776
Q ss_pred Hh
Q 011349 463 FG 464 (488)
Q Consensus 463 ~~ 464 (488)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 44
No 430
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.92 E-value=6.8e-09 Score=81.79 Aligned_cols=78 Identities=10% Similarity=-0.038 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccC-------CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGG-------TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
+..++..|..+++.|+|+.|+..|++|++.. +. ...++.++|.||.++|++++|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 5678899999999999999999999999753 33 678899999999999999999999999999999999999
Q ss_pred HHHHHH
Q 011349 456 YLQAAA 461 (488)
Q Consensus 456 ~~~g~~ 461 (488)
.+++..
T Consensus 84 ~n~~~~ 89 (104)
T 2v5f_A 84 GNLKYF 89 (104)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 888743
No 431
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.91 E-value=1.5e-08 Score=94.40 Aligned_cols=98 Identities=10% Similarity=-0.018 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHh----cCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCH
Q 011349 381 QETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~ 452 (488)
.++.+++..|..+.. .+++++|+..|++|++. . ++.+++++|.+|.. .+++++|+..|++|++++ ++
T Consensus 72 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~-~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~ 146 (273)
T 1ouv_A 72 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--K-YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DG 146 (273)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CH
T ss_pred CCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--C-CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cH
Confidence 467889999999999 99999999999999987 3 77889999999999 999999999999999986 78
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHhhcccc
Q 011349 453 TAFYLQAAALFG----LGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 453 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~p 483 (488)
.+++++|.++.. .+++++|++.|++++++++
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 181 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 181 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999999999999 9999999999999998754
No 432
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.90 E-value=3.2e-09 Score=85.08 Aligned_cols=84 Identities=10% Similarity=-0.078 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC--HHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQ 458 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~ 458 (488)
.++..++..|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|+. ..+...+
T Consensus 17 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l 95 (115)
T 2kat_A 17 DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKEL 95 (115)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHH
Confidence 45678999999999999999999999999999999 99999999999999999999999999999999854 4444444
Q ss_pred HHHHHhC
Q 011349 459 AAALFGL 465 (488)
Q Consensus 459 g~~~~~~ 465 (488)
...+..+
T Consensus 96 ~~~l~~l 102 (115)
T 2kat_A 96 QVFLRRL 102 (115)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4444433
No 433
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.88 E-value=1.3e-08 Score=82.90 Aligned_cols=83 Identities=12% Similarity=-0.048 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..++..|.+++..|+|++|+..|+++++.+|+ + +.+++++|.+|..+|++++|+..++++++.+|+++.+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 68899999999999999999999999999999 7 7889999999999999999999999999999999988777666
Q ss_pred HHHhCCC
Q 011349 461 ALFGLGM 467 (488)
Q Consensus 461 ~~~~~~~ 467 (488)
+....++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 5554443
No 434
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.88 E-value=6.2e-09 Score=93.55 Aligned_cols=97 Identities=14% Similarity=-0.006 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHhcC----ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCC--C
Q 011349 381 QETLNSKKRGDAAFRAK----DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISP--D 450 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~----~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p--~ 450 (488)
.++.+++..|..+.. + ++++|+..|++|++ +. ++.+++++|.+|.. .+++++|+..|++|++..| +
T Consensus 48 g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~ 123 (212)
T 3rjv_A 48 GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA 123 (212)
T ss_dssp TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHH
T ss_pred CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcc
Confidence 356667777777766 5 77777777777754 34 56667777777776 6777777777777777776 3
Q ss_pred CHHHHHHHHHHHHh----CCChHHHHHHHHHhhcc
Q 011349 451 WPTAFYLQAAALFG----LGMNNDAQETLKDGTNL 481 (488)
Q Consensus 451 ~~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 481 (488)
++.+++++|.+|.. .+++++|+..|++|+++
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 57777777777777 67777777777777766
No 435
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.87 E-value=5.1e-09 Score=86.97 Aligned_cols=87 Identities=9% Similarity=0.035 Sum_probs=64.5
Q ss_pred hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHhCCChHHHHH
Q 011349 399 FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD---MPQEALGDAMQAQVIS-P-DWPTAFYLQAAALFGLGMNNDAQE 473 (488)
Q Consensus 399 ~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~~A~~ 473 (488)
...+.+.|.++++.++. +..+.++.|.|+.+.+ ++++|+..++.+++.+ | +..+++|++|.+++++|+|++|+.
T Consensus 14 l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 44566677777777776 7777777777777777 5667777787777777 6 557777888888888888888888
Q ss_pred HHHHhhccccccc
Q 011349 474 TLKDGTNLEAKKH 486 (488)
Q Consensus 474 ~~~~al~l~p~~~ 486 (488)
+++++|+++|++.
T Consensus 93 y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 93 YVRGLLQTEPQNN 105 (152)
T ss_dssp HHHHHHHHCTTCH
T ss_pred HHHHHHhcCCCCH
Confidence 8888888777653
No 436
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.86 E-value=3.5e-09 Score=104.25 Aligned_cols=100 Identities=8% Similarity=-0.007 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch------HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC-----
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP------TVFARRCLCYLLSDMPQEALGDAMQAQVISPDW----- 451 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~------~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~----- 451 (488)
+..+...|..++..|+|++|+..|++++++.+. .. .++.++|.+|..+|++++|+..+++++++.|+.
T Consensus 187 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 265 (406)
T 3sf4_A 187 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 265 (406)
T ss_dssp HHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchH
Confidence 344555555555555555555555555544332 11 145555555555555555555555555554443
Q ss_pred -HHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 452 -PTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 452 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
+.+++.+|.++..+|++++|++.|++++++.+
T Consensus 266 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 298 (406)
T 3sf4_A 266 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 298 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 44555555555555555555555555554433
No 437
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.85 E-value=5.6e-09 Score=92.31 Aligned_cols=102 Identities=10% Similarity=0.015 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhc------cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh---CC--
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFID------GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---SP-- 449 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---~p-- 449 (488)
..+..+...|..++..|+|++|+..|+++++ ..+. ...++.++|.+|..+|++++|+..+++++++ .+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc
Confidence 4567899999999999999999999999998 6666 8889999999999999999999999999998 44
Q ss_pred --CCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 450 --DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 450 --~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
....+++++|.++..+|++++|++.+++++++.+
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3367899999999999999999999999998754
No 438
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.84 E-value=5.9e-09 Score=100.07 Aligned_cols=133 Identities=12% Similarity=0.094 Sum_probs=100.1
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC----CCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS----ERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.-++.++.|..+.||+. |..+++|+..... ....+.+|..+|+.+.+ -.+++++++ +..++||||+
T Consensus 40 ~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i 109 (320)
T 3r70_A 40 NELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYI 109 (320)
T ss_dssp SCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECC
T ss_pred EEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeec
Confidence 34567799999999988 5668899864321 13568999999999965 224555554 5678999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC---------------------------------------
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGR--------------------------------------- 173 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~--------------------------------------- 173 (488)
+|.++..... ..++..+...++.+++..|..||+...
T Consensus 110 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
T 3r70_A 110 KGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEM 185 (320)
T ss_dssp CCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred CCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccc
Confidence 9998874332 236777888888889998888885321
Q ss_pred -----------------------cccccccCCceeecCCCCCeeccCCCcccC
Q 011349 174 -----------------------ALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 174 -----------------------iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
++|+|++|.|||++.+..+.|+||+.+...
T Consensus 186 ~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 389999999999998666799999987543
No 439
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.84 E-value=3.9e-09 Score=104.52 Aligned_cols=101 Identities=12% Similarity=0.020 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchH------HHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT------VFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 451 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 451 (488)
.+..+...|..++..|+|++|+..|++++++.+. ... ++.++|.+|..+|++++|+..+++++++.|+.
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 300 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGERE 300 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHH
Confidence 3445666666666666666666666666665543 222 56666666666666666666666666665543
Q ss_pred --HHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 452 --PTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 452 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
..+++.+|.++..+|++++|++.|++++++.+
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 301 VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 55666666666666666666666666665544
No 440
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.83 E-value=1.5e-08 Score=91.04 Aligned_cols=102 Identities=11% Similarity=-0.090 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHh----cCChHHHHHHHHHhhccCCC-CchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCC
Q 011349 381 QETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTM-VSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDW 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~ 451 (488)
.++.+++..|..+.. .+++++|+..|++|++.+|. ..+.+++++|.+|.. .+++++|+..|++|+++ |.+
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 467889999999998 89999999999999999983 148899999999999 89999999999999999 888
Q ss_pred HHHHHHHHHHHHhC-C-----ChHHHHHHHHHhhcccc
Q 011349 452 PTAFYLQAAALFGL-G-----MNNDAQETLKDGTNLEA 483 (488)
Q Consensus 452 ~~a~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~p 483 (488)
+.+++++|.+|... | ++++|+..|++|.+...
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 89999999999864 3 89999999999998743
No 441
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.83 E-value=1e-08 Score=103.67 Aligned_cols=103 Identities=9% Similarity=-0.042 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc-----CCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh----
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 447 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 447 (488)
..+.+....+++..+..+|+|++|+..|++++++ .|++ -...++|+|.+|..+|+|++|+..+++++++
T Consensus 305 ~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 305 MIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 3345556677788888999999999999999953 4441 3467999999999999999999999999976
Q ss_pred -CCCC---HHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 448 -SPDW---PTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 448 -~p~~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
.|++ +..++++|.+|..+|+|++|+..|++|+++
T Consensus 385 lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 385 YHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3555 568999999999999999999999999975
No 442
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.81 E-value=6.3e-09 Score=99.08 Aligned_cols=99 Identities=16% Similarity=0.120 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc------hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC------H
Q 011349 385 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS------PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW------P 452 (488)
Q Consensus 385 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~------~ 452 (488)
.+...|..+...|++++|+..|++++++.+. . ..++.++|.+|..+|++++|+..+++++++.|.. .
T Consensus 225 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 303 (338)
T 3ro2_A 225 AYSNLGNAYIFLGEFETASEYYKKTLLLARQ-LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 303 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 5555666666666666666666666654433 2 3455556666666666666666666666655443 3
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 453 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 453 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+++.+|.++..+|++++|++.|++++++.++
T Consensus 304 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 304 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 35556666666666666666666666655543
No 443
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.80 E-value=1e-08 Score=100.77 Aligned_cols=103 Identities=12% Similarity=-0.053 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC------CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCC-----
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM------VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISP----- 449 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p----- 449 (488)
..+..++..|..++..|++++|+..|++|+++.+. ....+++++|.+|..+|++++|++.|++|+++.+
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 218 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQND 218 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCH
Confidence 45666777777777777777777777777754332 0234566777777777777777777777776532
Q ss_pred -CCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 450 -DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 450 -~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
..+.+++++|.++..+|++++|++.|++|+++..
T Consensus 219 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 253 (378)
T 3q15_A 219 RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSR 253 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 1245677777777777777777777777776543
No 444
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.75 E-value=6.9e-08 Score=92.37 Aligned_cols=74 Identities=12% Similarity=0.097 Sum_probs=64.8
Q ss_pred hccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 410 IDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 410 i~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+..+|. ++.+|.-+|.++...|++++|+..+++|++++|+ ..+|..+|.++...|++++|++.|++|++++|..
T Consensus 270 ~~~~~~-~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 270 LPELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp CGGGTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred cccCCc-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 355666 6667777777777789999999999999999975 6789999999999999999999999999999964
No 445
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.74 E-value=2.8e-08 Score=98.89 Aligned_cols=95 Identities=11% Similarity=-0.061 Sum_probs=79.3
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhhc-----cCCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-----CCCC---
Q 011349 387 KKRGDAAFRAKDFPTAIECYTHFID-----GGTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI-----SPDW--- 451 (488)
Q Consensus 387 ~~~g~~~~~~~~~~~A~~~~~~ai~-----~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~p~~--- 451 (488)
.+.+......|+|++|+..|+++++ +.|++ -...++|+|.+|..+|+|++|+..+++++++ .|++
T Consensus 302 le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 302 IEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 3344444567999999999999996 35551 3457999999999999999999999999966 3454
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
+..++++|.+|..+|+|++|+..|++|+++
T Consensus 382 a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 382 ASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 567999999999999999999999999976
No 446
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.70 E-value=2.4e-08 Score=80.97 Aligned_cols=85 Identities=14% Similarity=0.071 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc-------hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS-------PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~ 453 (488)
.++..+...|..++..|+|++|+..|+++++.+|. . ..+++++|.+|..+|++++|+..|++++++.| ++.
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~ 113 (131)
T 1elr_A 36 TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPD 113 (131)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHH
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHH
Confidence 35678999999999999999999999999999886 5 88999999999999999999999999999999 588
Q ss_pred HHHHHHHHHHhCCC
Q 011349 454 AFYLQAAALFGLGM 467 (488)
Q Consensus 454 a~~~~g~~~~~~~~ 467 (488)
.+..++.++..+++
T Consensus 114 ~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 114 VLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888766543
No 447
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.68 E-value=5.7e-08 Score=92.53 Aligned_cols=134 Identities=15% Similarity=0.061 Sum_probs=95.3
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC---CCccccccee-cCCeeeEEEecCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE---RLVNLIGCCC-EGEERLLVAEFMPN 134 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 134 (488)
++.++.|....||+. |..++||+.... .....+.+|+.+|+.+.+. .+++.+.++. ..+..++|||+++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456788888899987 456888885321 2245789999999999753 3566666663 44567899999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG------------------------------------------ 172 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------ 172 (488)
.+|.+... ..++..+...++.++++.|..||+..
T Consensus 98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 88876321 12456666666666666666666431
Q ss_pred -----------------CcccccccCCceeecC---CCCC-eeccCCCccc
Q 011349 173 -----------------RALYHDLNTYRILFDQ---DGNP-RLSCFGLMKN 202 (488)
Q Consensus 173 -----------------~iiH~Dlkp~Nill~~---~~~~-kl~Dfgla~~ 202 (488)
.++|+|++|.||+++. ++.+ .|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1489999999999987 4554 7999998754
No 448
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.67 E-value=7.1e-08 Score=99.26 Aligned_cols=103 Identities=7% Similarity=-0.154 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHh-------cCChH-------HHHHHHHHhhc-cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFR-------AKDFP-------TAIECYTHFID-GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQ 445 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~-------~~~~~-------~A~~~~~~ai~-~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 445 (488)
..+..|+..|..+.+ .|+++ +|+..|++|++ .+|+ +..+|.++|.++...|++++|...|++++
T Consensus 270 ~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~al 348 (530)
T 2ooe_A 270 HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLL 348 (530)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 456677777777765 57766 77777777776 6777 77777777777777777777777777777
Q ss_pred HhCCCCH-HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 446 VISPDWP-TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 446 ~l~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
++.|+++ .+|...|.++..+|++++|++.|++|++..|.
T Consensus 349 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 349 AIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred CccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 7777774 57777777777777777777777777766553
No 449
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.66 E-value=1.3e-07 Score=78.56 Aligned_cols=89 Identities=8% Similarity=-0.087 Sum_probs=83.4
Q ss_pred HHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 011349 389 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 464 (488)
Q Consensus 389 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 464 (488)
.|..+...+.+++|++.|++|.+. . ++.+++++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 889999999999999999999997 4 77899999999999 89999999999999998 789999999999999
Q ss_pred ----CCChHHHHHHHHHhhccc
Q 011349 465 ----LGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 465 ----~~~~~~A~~~~~~al~l~ 482 (488)
.+++++|++.|++|.++.
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCCcCHHHHHHHHHHHHHCC
Confidence 999999999999999874
No 450
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.66 E-value=5.4e-08 Score=91.64 Aligned_cols=76 Identities=20% Similarity=0.212 Sum_probs=61.2
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC---CCcccccceecCCeeeEEEecCCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE---RLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
++.+|.|.++.||++...+|+.++||+...........|.+|+..|+.+.+. .+++++++. ..++||||++|+
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 4568999999999999888999999997654333456789999999999865 577777753 369999999998
Q ss_pred Chh
Q 011349 136 TLS 138 (488)
Q Consensus 136 sL~ 138 (488)
++.
T Consensus 96 ~~~ 98 (288)
T 3d1u_A 96 PPT 98 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 753
No 451
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.64 E-value=4.7e-08 Score=90.66 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQAAA 461 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~ 461 (488)
......|..+...|+|++|.+.|+.++..+|. .. +.+.+|.++++.++|++|+..++++++..+.. ..+++++|.+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~a 180 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVA 180 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHH
Confidence 34556788999999999999999999999998 77 88999999999999999999999988764222 4689999999
Q ss_pred HHhCCChHHHHHHHHHhhccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~ 482 (488)
+..+|++++|+..|++++.-.
T Consensus 181 l~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 181 AANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHTTCHHHHHHHHHHHHTST
T ss_pred HHHCCCHHHHHHHHHHHhcCC
Confidence 999999999999999998543
No 452
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.64 E-value=7.7e-08 Score=95.81 Aligned_cols=99 Identities=11% Similarity=0.013 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhcc-----CCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-----CCC
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI-----SPD 450 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~p~ 450 (488)
+.........+.++|+|++|+..|++++++ .|++ -...++|+|.+|..+|+|++|+..+++++++ .|+
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 334455566677889999999999999964 4441 2457999999999999999999999999966 345
Q ss_pred C---HHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 451 W---PTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 451 ~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
+ +..++++|.+|..+|++++|+..|++|+++
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 4 557999999999999999999999999975
No 453
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.60 E-value=1.2e-07 Score=88.54 Aligned_cols=128 Identities=14% Similarity=0.037 Sum_probs=91.8
Q ss_pred CCCc-eEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCCCCChhhhh
Q 011349 65 KAPN-VVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMPNETLSKHL 141 (488)
Q Consensus 65 G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 141 (488)
|..| .||+.... ++..+.||+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++.+..
T Consensus 35 G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~ 111 (272)
T 4gkh_A 35 GQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVL 111 (272)
T ss_dssp SSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHH
T ss_pred CCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccc
Confidence 4333 69988743 4667899986532 3457889999999884 434778899988889999999999998877654
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------------
Q 011349 142 FHWENQPMKWAMRVRVALYLAQALDYCSSKG------------------------------------------------- 172 (488)
Q Consensus 142 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------------- 172 (488)
.. .......+..+++..|.-||+..
T Consensus 112 ~~------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 185 (272)
T 4gkh_A 112 EE------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHK 185 (272)
T ss_dssp HH------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHT
T ss_pred cC------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHh
Confidence 31 11223345555555555555310
Q ss_pred --------CcccccccCCceeecCCCCCeeccCCCcc
Q 011349 173 --------RALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 173 --------~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
-++|+|+.|.|||+++++.+-|+||+.+.
T Consensus 186 ~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 186 LLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 06899999999999987777799999875
No 454
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.58 E-value=1.9e-07 Score=96.05 Aligned_cols=100 Identities=14% Similarity=0.020 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHH-HHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLC-YLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
..|...|..+.+.|++++|+..|++|++..|. ....|...+.. +...|++++|...|+++++..|+++.+|...|..+
T Consensus 357 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~ 435 (530)
T 2ooe_A 357 LVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 435 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 46666666666667777777777777776665 55555444433 34577888888888888888888888888888888
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~ 484 (488)
..+|++++|...|++|++..|.
T Consensus 436 ~~~g~~~~Ar~~~~~al~~~~~ 457 (530)
T 2ooe_A 436 SHLNEDNNTRVLFERVLTSGSL 457 (530)
T ss_dssp TTTTCHHHHHHHHHHHHHSCCS
T ss_pred HhCCCHhhHHHHHHHHHhccCC
Confidence 8888888888888888876543
No 455
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.58 E-value=8.9e-08 Score=93.50 Aligned_cols=100 Identities=14% Similarity=0.043 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccC--------CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGG--------TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 451 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 451 (488)
..+...|..++..|+|++|+..|++++++. |. ...++.++|.++...|++++|+..+++++++.|..
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 446789999999999999999999999764 33 45678889999999999999999999999999863
Q ss_pred -HHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 452 -PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 452 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
..+++.+|.++...|++++|.+.+++++++.+.
T Consensus 173 ~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~ 206 (373)
T 1hz4_A 173 QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGN 206 (373)
T ss_dssp GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 568999999999999999999999999988654
No 456
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.55 E-value=2.2e-07 Score=90.67 Aligned_cols=67 Identities=10% Similarity=-0.018 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC----chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV----SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD 450 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~ 450 (488)
..+...|..++..|++++|+..|++++++.+.. ...++.++|.++...|++++|+..+++++++.+.
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~ 206 (373)
T 1hz4_A 136 FLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGN 206 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 344445555555555555555555555544421 1234445555555555555555555555555433
No 457
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.52 E-value=1.3e-07 Score=92.04 Aligned_cols=81 Identities=4% Similarity=-0.058 Sum_probs=58.1
Q ss_pred cccC-CCCCCceEEEEEeC-------CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcC-C--CCCcccccceecC--
Q 011349 59 VSEH-GEKAPNVVYKGLVD-------EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLR-S--ERLVNLIGCCCEG-- 122 (488)
Q Consensus 59 ~~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~-- 122 (488)
++.| +.|..+.+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+++++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4566 88889999998754 26678899865432 112356889999999985 3 3577888877554
Q ss_pred -CeeeEEEecCCCCChhh
Q 011349 123 -EERLLVAEFMPNETLSK 139 (488)
Q Consensus 123 -~~~~lv~e~~~~gsL~~ 139 (488)
+..++|||+++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35789999999877654
No 458
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.50 E-value=3.4e-07 Score=84.07 Aligned_cols=104 Identities=13% Similarity=-0.004 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHh-----cCC------hHHHHHHHHHhhccCCC-CchHHHhcHHHHHHhh-----CCHHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFR-----AKD------FPTAIECYTHFIDGGTM-VSPTVFARRCLCYLLS-----DMPQEALGDAMQ 443 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~-----~~~------~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~~-----~~~~~A~~~~~~ 443 (488)
++++.++..|..... .|+ ...|...+++||+++|+ .+..+|..+|..|.+. |+.++|.++|++
T Consensus 150 ~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~fer 229 (301)
T 3u64_A 150 VDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEH 229 (301)
T ss_dssp GGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHH
Confidence 445555555555432 243 57899999999999998 2345899999999995 999999999999
Q ss_pred HHHhCCCC-HHHHHHHHHHHHh-CCChHHHHHHHHHhhccccc
Q 011349 444 AQVISPDW-PTAFYLQAAALFG-LGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 444 al~l~p~~-~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~p~ 484 (488)
|++++|+. ..+++..|..+.. +|++++|.+.+++|++.+|.
T Consensus 230 AL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 230 LTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 99999975 9999999999988 59999999999999999887
No 459
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.48 E-value=2.4e-07 Score=90.24 Aligned_cols=80 Identities=10% Similarity=0.017 Sum_probs=60.2
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC--CcccccceecC-CeeeEEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER--LVNLIGCCCEG-EERLLVA 129 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~ 129 (488)
|....-++.++.|..+.||+... ++..+++|+.... ..+.+|+.+++.+.... +++++.++... +..++||
T Consensus 40 ~~~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~ 113 (362)
T 3ovc_A 40 FDSVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCIS 113 (362)
T ss_dssp SSCCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEE
T ss_pred cCCCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEE
Confidence 44444566788999999999876 5777999987432 36899999999996533 56777766654 5689999
Q ss_pred ecCCCCChh
Q 011349 130 EFMPNETLS 138 (488)
Q Consensus 130 e~~~~gsL~ 138 (488)
|+++|.++.
T Consensus 114 e~l~G~~l~ 122 (362)
T 3ovc_A 114 RRAQGVTLQ 122 (362)
T ss_dssp ECCCSEETT
T ss_pred EecCCCCcc
Confidence 999987664
No 460
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.46 E-value=4.8e-07 Score=70.99 Aligned_cols=69 Identities=12% Similarity=-0.144 Sum_probs=62.3
Q ss_pred hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVIS-------PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 418 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.-.+.+|..++..++|..|+..|++|++.. +..+..+.++|.+++++|++++|+..+++|++++|+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 4456789999999999999999999999874 45688999999999999999999999999999999864
No 461
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.45 E-value=7.3e-07 Score=90.66 Aligned_cols=98 Identities=11% Similarity=-0.035 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHhcC---ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCHH
Q 011349 381 QETLNSKKRGDAAFRAK---DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPT 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~ 453 (488)
.++.+++..|..+...| ++++|++.|++|++. . ++.+++++|.+|.. .+++++|+..|++|++. +++.
T Consensus 326 ~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~ 400 (490)
T 2xm6_A 326 GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSA 400 (490)
T ss_dssp TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHH
Confidence 45678889999998866 899999999999987 4 67899999999999 89999999999999986 4799
Q ss_pred HHHHHHHHHHh----CCChHHHHHHHHHhhcccc
Q 011349 454 AFYLQAAALFG----LGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 454 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~p 483 (488)
+++++|.+|.. .+++++|++.|++|++.+|
T Consensus 401 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 401 AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 99999999998 8999999999999999984
No 462
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.43 E-value=6.3e-07 Score=68.60 Aligned_cols=71 Identities=6% Similarity=-0.127 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHhcCC---hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH
Q 011349 381 QETLNSKKRGDAAFRAKD---FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 452 (488)
+++..+..+|.+++..++ .++|...+++|++++|+ +..++..+|..+++.|+|++|+..++++++.+|..+
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 357788999999976555 79999999999999999 999999999999999999999999999999999843
No 463
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.41 E-value=4.6e-07 Score=91.25 Aligned_cols=95 Identities=11% Similarity=0.054 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHhcC---ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh----CCHHHHHHHHHHHHHhCCCCHHHH
Q 011349 383 TLNSKKRGDAAFRAK---DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS----DMPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~----~~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
+.+++..|..+...| ++++|+..|+++++.+|. .+..++++|.+|... +++++|+..|+++. |+++.++
T Consensus 176 ~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~ 251 (452)
T 3e4b_A 176 DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASW 251 (452)
T ss_dssp TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHH
T ss_pred HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 336666777777777 777777777777777666 666666666666554 56677777777766 6667777
Q ss_pred HHHHHH-H--HhCCChHHHHHHHHHhhcc
Q 011349 456 YLQAAA-L--FGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 456 ~~~g~~-~--~~~~~~~~A~~~~~~al~l 481 (488)
+++|.+ + ...+++++|++.|++|.+.
T Consensus 252 ~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 252 VSLAQLLYDFPELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp HHHHHHHHHSGGGCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHC
Confidence 777766 3 3566677777777766644
No 464
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.40 E-value=5.8e-07 Score=74.56 Aligned_cols=81 Identities=12% Similarity=-0.037 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHhcC---ChHHHHHHHHHhhccC-CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAK---DFPTAIECYTHFIDGG-TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
+.++.++.|.++.+.+ +.++|+..+++.++.+ |.+...+++++|..|+++|+|++|+++++++++++|+|..|..-
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 5678899999999988 7889999999999998 74378899999999999999999999999999999999998776
Q ss_pred HHHHH
Q 011349 458 QAAAL 462 (488)
Q Consensus 458 ~g~~~ 462 (488)
+-.+-
T Consensus 111 k~~ie 115 (152)
T 1pc2_A 111 ERLID 115 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
No 465
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.38 E-value=4.7e-07 Score=91.55 Aligned_cols=100 Identities=11% Similarity=-0.001 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc-----CCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-----C
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI-----S 448 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~ 448 (488)
.-+..+.+.|.+|..+|+|++|+..|++++++ .|++ -...++|+|.+|..+|+|++|+..|++|+++ .
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999953 4441 4467999999999999999999999999965 5
Q ss_pred CCC---HHHHHHHHHHHHhCCChHHHHHHHHHhhc
Q 011349 449 PDW---PTAFYLQAAALFGLGMNNDAQETLKDGTN 480 (488)
Q Consensus 449 p~~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 480 (488)
|++ .+....++.++..+++|++|...|.++.+
T Consensus 429 ~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 429 PSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666 45677899999999999999999998864
No 466
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.32 E-value=3.4e-06 Score=85.74 Aligned_cols=96 Identities=14% Similarity=-0.045 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHh----cCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCH
Q 011349 381 QETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~ 452 (488)
.++.+++..|..+.. .+++++|+..|++|++. . ++.+++++|.+|.. .+++++|+..|++|++. +++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 567899999999999 99999999999999985 3 66788899999998 88999999999999876 689
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHhhcc
Q 011349 453 TAFYLQAAALFG----LGMNNDAQETLKDGTNL 481 (488)
Q Consensus 453 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 481 (488)
.+++++|.+|.. .+++++|++.|+++++.
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~ 180 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ 180 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 999999999998 88999999999999876
No 467
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.32 E-value=5e-06 Score=80.13 Aligned_cols=137 Identities=12% Similarity=0.090 Sum_probs=81.4
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC--CCCcccccc------eecCCeeeEEEe
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS--ERLVNLIGC------CCEGEERLLVAE 130 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~------~~~~~~~~lv~e 130 (488)
+..|+.|..+.||+....+|. +++|+.... ...+..|+.+++.+.. -.+++++.. ....+..++||+
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSGA-VCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTEE-EEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCCC-EEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 345666788999999876655 899998752 3455567777776642 234444431 124567899999
Q ss_pred cCCCCChhh--------------hhccC-CCC-----------CCCHHHH------------------------------
Q 011349 131 FMPNETLSK--------------HLFHW-ENQ-----------PMKWAMR------------------------------ 154 (488)
Q Consensus 131 ~~~~gsL~~--------------~l~~~-~~~-----------~l~~~~~------------------------------ 154 (488)
|++|.++.. .++.. ... .-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 999865530 11110 000 0122211
Q ss_pred -HHHHHHHHHHHHHHHh-------------CCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 155 -VRVALYLAQALDYCSS-------------KGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 155 -~~i~~~i~~~l~~LH~-------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
..+...+..++.+|+. .. ++|+|+++.|||++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPN-LCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCC-EECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCc-eecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223445666652 34 8999999999999878889999999764
No 468
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.27 E-value=2.8e-06 Score=83.87 Aligned_cols=96 Identities=17% Similarity=0.059 Sum_probs=58.8
Q ss_pred ccccCHHHHHHHhc---CCCc--ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-------CChHHHHHHHHHH
Q 011349 38 FREFNLDQLRAATS---GFCA--DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-------PDSRQFLEEARAV 104 (488)
Q Consensus 38 ~~~~~~~~~~~~~~---~~~~--~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l 104 (488)
+..++.+++..... -|.. ..-++.+|.|.++.||++... +++.|+||....... .....+..|.++|
T Consensus 9 ~~~l~~~~v~~~l~~~~~~~~~~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L 88 (397)
T 2olc_A 9 YETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSAL 88 (397)
T ss_dssp CCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHH
T ss_pred cccCCHHHHHHHHHhcCcCCCCCceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHH
Confidence 44455555554433 2222 123567899999999999743 467899998653211 1235678899999
Q ss_pred hhcCC--C-CCcccccceecCCeeeEEEecCCCC
Q 011349 105 GLLRS--E-RLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 105 ~~l~h--~-niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
+.+.. + .+++++.+ +.+..++|||+++|.
T Consensus 89 ~~l~~~~~~~vP~~~~~--d~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 89 IRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSHL 120 (397)
T ss_dssp HHHHTTCGGGSCCEEEE--ETTTTEEEECCCTTS
T ss_pred HHhhhhCCCCcCeEEEE--cCCccEEEEEeCCCc
Confidence 98842 3 34566643 345568999999864
No 469
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.26 E-value=3.5e-06 Score=92.68 Aligned_cols=63 Identities=19% Similarity=0.221 Sum_probs=51.4
Q ss_pred chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 417 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+.+|+++|.++.+.|++++|+..|.+| +++.+|++.|.++.++|+|++|+++|..|.+.+++
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 5678888888888888888888888776 77888888888888888888888888888877654
No 470
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.24 E-value=4.1e-06 Score=92.13 Aligned_cols=95 Identities=12% Similarity=0.035 Sum_probs=77.1
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC-------
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD------- 450 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~------- 450 (488)
+++..+..|++.|.++.+.|++++|++.|.+| + ++..|.+.|.++.++|+|++|++.|..|.+..++
T Consensus 1100 ervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~L 1173 (1630)
T 1xi4_A 1100 ERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETEL 1173 (1630)
T ss_pred HhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHH
Confidence 45577889999999999999999999999887 4 7789999999999999999999999888766643
Q ss_pred --------------------CHHHHHHHHHHHHhCCChHHHHHHHHHh
Q 011349 451 --------------------WPTAFYLQAAALFGLGMNNDAQETLKDG 478 (488)
Q Consensus 451 --------------------~~~a~~~~g~~~~~~~~~~~A~~~~~~a 478 (488)
+...|++.|..++..|+|++|+..|.+|
T Consensus 1174 afaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1174 IFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 2234566777777777777777777665
No 471
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.24 E-value=3e-06 Score=70.17 Aligned_cols=79 Identities=14% Similarity=-0.006 Sum_probs=71.2
Q ss_pred cCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh----CCChHHH
Q 011349 396 AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG----LGMNNDA 471 (488)
Q Consensus 396 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A 471 (488)
.+++++|+..|++|.+.+.. .+. +|.+|...+.+++|++.|++|.+. +++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-THH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 35799999999999998754 333 999999999999999999999998 799999999999998 8999999
Q ss_pred HHHHHHhhcc
Q 011349 472 QETLKDGTNL 481 (488)
Q Consensus 472 ~~~~~~al~l 481 (488)
++.|++|.+.
T Consensus 81 ~~~~~~Aa~~ 90 (138)
T 1klx_A 81 AQYYSKACGL 90 (138)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999999876
No 472
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.21 E-value=1e-05 Score=81.36 Aligned_cols=94 Identities=10% Similarity=-0.102 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHH-H--HhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC-----CHHHHHHHHHHHHHhCCCCH
Q 011349 381 QETLNSKKRGDA-A--FRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-----MPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 381 ~~~~~~~~~g~~-~--~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----~~~~A~~~~~~al~l~p~~~ 452 (488)
.++.+++..|.. + ...+++++|+..|++|++.+ ++.+++++|.+|. .| ++++|+..|++|+ |+++
T Consensus 246 g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~ 318 (452)
T 3e4b_A 246 GYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREV 318 (452)
T ss_dssp GSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCH
T ss_pred CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCH
Confidence 445566666665 3 35566666666666666432 4555666666665 34 6666666666666 6666
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHhhcc
Q 011349 453 TAFYLQAAALFG----LGMNNDAQETLKDGTNL 481 (488)
Q Consensus 453 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 481 (488)
.+++++|.+|.. ..++++|+..|++|.+.
T Consensus 319 ~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 319 AADYYLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 666666666555 23666666666666553
No 473
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.20 E-value=2.9e-06 Score=67.71 Aligned_cols=84 Identities=8% Similarity=0.048 Sum_probs=46.1
Q ss_pred HHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHhCCChHHHHHHH
Q 011349 401 TAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQE---ALGDAMQAQVIS-P-DWPTAFYLQAAALFGLGMNNDAQETL 475 (488)
Q Consensus 401 ~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~---A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~~A~~~~ 475 (488)
.+.+.|.+++..++. ...+-++.|.++.+..+..+ +|..++..++-+ | ..-+.+|.+|.+++++|+|++|+.++
T Consensus 19 ~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~ 97 (126)
T 1nzn_A 19 KFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYV 97 (126)
T ss_dssp HHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 344444555444444 55555555555555555444 555555555554 3 34455566666666666666666666
Q ss_pred HHhhcccccc
Q 011349 476 KDGTNLEAKK 485 (488)
Q Consensus 476 ~~al~l~p~~ 485 (488)
+..|+++|++
T Consensus 98 ~~lL~~eP~n 107 (126)
T 1nzn_A 98 RGLLQTEPQN 107 (126)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHhCCCC
Confidence 6666666654
No 474
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.10 E-value=4.2e-06 Score=82.25 Aligned_cols=93 Identities=12% Similarity=0.073 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..|..+|.++++.|+|++|++.|.+| . ++..|.....++...|+|+.|..+... |..+|++ ...+...
T Consensus 147 ~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~ 216 (449)
T 1b89_A 147 NVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINY 216 (449)
T ss_dssp HTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHH
T ss_pred HhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHH
Confidence 3456666666666666666666666666 2 445666666666666666666555553 3344444 3356678
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
|...|++++|+..|++++.+|+.
T Consensus 217 Yek~G~~eEai~lLe~aL~le~a 239 (449)
T 1b89_A 217 YQDRGYFEELITMLEAALGLERA 239 (449)
T ss_dssp HHHTTCHHHHHHHHHHHTTSTTC
T ss_pred HHHCCCHHHHHHHHHHHhCCcHH
Confidence 89999999999999999999864
No 475
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.08 E-value=5.2e-06 Score=82.47 Aligned_cols=100 Identities=8% Similarity=-0.007 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch-----------------HHHhcHHHHHHhhCCHHHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP-----------------TVFARRCLCYLLSDMPQEALGDAMQAQV 446 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~~~~~al~ 446 (488)
.+..++|..+.+.|+|++|++.|.++++.+|. .. .++.++|.+|...|++++|++.+.++++
T Consensus 5 ~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~ 83 (434)
T 4b4t_Q 5 GSKLEEARRLVNEKQYNEAEQVYLSLLDKDSS-QSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTE 83 (434)
T ss_dssp THHHHHHHHHHHHTCHHHHHHHHHHHHHSCCC-SSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 35567888889999999999999999988876 32 2477889999999999999999999998
Q ss_pred hCCCCHHH------HHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 447 ISPDWPTA------FYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 447 l~p~~~~a------~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+.+...++ +..+|.++...|++++|++.+++++...++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 127 (434)
T 4b4t_Q 84 YMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKR 127 (434)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 87765443 345677777788888888888888776554
No 476
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.08 E-value=1.9e-05 Score=74.16 Aligned_cols=99 Identities=11% Similarity=-0.075 Sum_probs=59.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhccCC--CCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC----CHHHHHHH
Q 011349 385 NSKKRGDAAFRAKDFPTAIECYTHFIDGGT--MVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD----WPTAFYLQ 458 (488)
Q Consensus 385 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~----~~~a~~~~ 458 (488)
++.-.|.++...|++++|++.+.++|..+| . ...++...+.+++++|+.+.|.+.+++..+.+|+ +-....++
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~L 180 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNL 180 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHH
Confidence 345666666666777777777777666665 4 6666666666667777777777776666666662 11223333
Q ss_pred HH--HHHhCC--ChHHHHHHHHHhhccccc
Q 011349 459 AA--ALFGLG--MNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 459 g~--~~~~~~--~~~~A~~~~~~al~l~p~ 484 (488)
+. +....| ++++|...|+++.+..|+
T Consensus 181 aea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 181 AESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 32 244334 666666666666655553
No 477
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=98.05 E-value=2e-05 Score=74.65 Aligned_cols=75 Identities=20% Similarity=0.080 Sum_probs=60.4
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC---CCCCcccccceecCCeeeEEEecCCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR---SERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
++.++.|....+|+... ++..++||+.... ....+.+|+..|+.+. ...+++++.++...+..++|||+++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45689999999999876 4567889987542 3567899999999984 356888888887778899999999987
Q ss_pred Ch
Q 011349 136 TL 137 (488)
Q Consensus 136 sL 137 (488)
++
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 478
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.05 E-value=1.5e-05 Score=74.80 Aligned_cols=97 Identities=12% Similarity=-0.003 Sum_probs=79.3
Q ss_pred HHHHHHHHHHhcC--ChHHHHHHHHHhhccCCC-CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh----------CCCC
Q 011349 385 NSKKRGDAAFRAK--DFPTAIECYTHFIDGGTM-VSPTVFARRCLCYLLSDMPQEALGDAMQAQVI----------SPDW 451 (488)
Q Consensus 385 ~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l----------~p~~ 451 (488)
.....|.+.+..| ++++|...|+++.+..|+ .....+++ +++.+|++++|.+.+++++++ +|++
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~ 254 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYK 254 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSH
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCC
Confidence 3444454466556 999999999999988875 01233334 899999999999999988887 5999
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++++.++..+.+.+|+ +|.+.++++.+++|+.+
T Consensus 255 ~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 255 PTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp HHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 9999999999999998 99999999999999853
No 479
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.94 E-value=2.6e-05 Score=73.19 Aligned_cols=76 Identities=20% Similarity=0.202 Sum_probs=57.4
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC---CCcccccceecCCeeeEEEecCCC
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE---RLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
-+..+|.|..+.||+....+|+.|.||+...........|.+|+..|+.|.-. .+++++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 35678999999999999999999999987655544455788999999998422 345555542 34789999987
Q ss_pred CCh
Q 011349 135 ETL 137 (488)
Q Consensus 135 gsL 137 (488)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 480
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.93 E-value=5.4e-05 Score=72.23 Aligned_cols=160 Identities=13% Similarity=0.114 Sum_probs=93.8
Q ss_pred ccccCHHHHHHHhcCCCccc--ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC--Cc
Q 011349 38 FREFNLDQLRAATSGFCADN--IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER--LV 113 (488)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~--~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 113 (488)
+..++.+++......|.... -++.++.|....||+....+| .+++|+..... ....+..|+.+++.+...+ ++
T Consensus 4 ~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 4 YTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp -CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCC
Confidence 34567788887777665422 345678888899999987666 48899887531 2346677888888884322 34
Q ss_pred ccccce------ecCCeeeEEEecCCCCChhhh--------------hccC-CC--CC----C---CHHHHHH-------
Q 011349 114 NLIGCC------CEGEERLLVAEFMPNETLSKH--------------LFHW-EN--QP----M---KWAMRVR------- 156 (488)
Q Consensus 114 ~~~~~~------~~~~~~~lv~e~~~~gsL~~~--------------l~~~-~~--~~----l---~~~~~~~------- 156 (488)
+++... ...+..+++|++++|.++... ++.. .. .+ . .|...+.
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 444321 123567899999998654210 1110 00 00 1 1221100
Q ss_pred -----HHHHHHHHHHHHHh-------CCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 157 -----VALYLAQALDYCSS-------KGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 157 -----i~~~i~~~l~~LH~-------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
+...+...+..++. .+ ++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~-liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcc-cCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113444555553 23 8999999999999977666899999764
No 481
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.93 E-value=3.4e-05 Score=64.35 Aligned_cols=94 Identities=11% Similarity=-0.059 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCC--------CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCC------
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM--------VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISP------ 449 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p------ 449 (488)
.++++....++..|.|+.|+-..+.++.+..+ ..+.++...|.+++..++|..|...|++||++.-
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 35677788889999999999999998755332 1123778899999999999999999999985531
Q ss_pred -------------------CCHHHHHHHHHHHHhCCChHHHHHHHHH
Q 011349 450 -------------------DWPTAFYLQAAALFGLGMNNDAQETLKD 477 (488)
Q Consensus 450 -------------------~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 477 (488)
.+.+..|.+|.||.+++++++|+..++.
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1236889999999999999999998775
No 482
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.90 E-value=4.7e-05 Score=75.48 Aligned_cols=102 Identities=7% Similarity=-0.025 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC-----CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh------CCCC
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM-----VSPTVFARRCLCYLLSDMPQEALGDAMQAQVI------SPDW 451 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~~ 451 (488)
.......|..+...|++++|+..|+++++..+. ....++.++|.+|...|+|++|+..+++++.. .|..
T Consensus 95 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~ 174 (434)
T 4b4t_Q 95 KVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSL 174 (434)
T ss_dssp HHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhH
Confidence 345566788888899999999999999864322 14678899999999999999999999999876 4555
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+++...|.++..+|++++|...|++++.+.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 175 VDVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999987654
No 483
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.87 E-value=6.7e-05 Score=74.55 Aligned_cols=74 Identities=14% Similarity=0.158 Sum_probs=45.9
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCC----CC--C---ChHHHHHHHHHHhh-cCCCCCcccccceecCCeeeE
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRS----AW--P---DSRQFLEEARAVGL-LRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~----~~--~---~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~l 127 (488)
-++.+|.|..+.||++.. +++.++||..... .. . ....+..|+..+.. .....+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 456789999999999964 4667999943211 00 1 22233344333321 2234677777665 466799
Q ss_pred EEecC-CC
Q 011349 128 VAEFM-PN 134 (488)
Q Consensus 128 v~e~~-~~ 134 (488)
|||++ +|
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 484
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.81 E-value=0.00018 Score=68.80 Aligned_cols=98 Identities=15% Similarity=0.098 Sum_probs=63.9
Q ss_pred ccccCHHHHHHHhcCCCcc--cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC--Cc
Q 011349 38 FREFNLDQLRAATSGFCAD--NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER--LV 113 (488)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~--~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 113 (488)
+...+.+++..+...+.-. .-+..++ |....||+....+|+.+++|..+... .....+..|..+++.+.... ++
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeec
Confidence 5556777776665544322 1234566 88889999877677779999987442 24567888999998885322 44
Q ss_pred ccccc-----eecCCeeeEEEecCCCCCh
Q 011349 114 NLIGC-----CCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 114 ~~~~~-----~~~~~~~~lv~e~~~~gsL 137 (488)
+++.. ....+..++||++++|.++
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~ 114 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQF 114 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCC
Confidence 45443 1124456889999997554
No 485
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.72 E-value=6.6e-05 Score=65.82 Aligned_cols=139 Identities=12% Similarity=0.036 Sum_probs=91.5
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcccccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS-SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 213 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~ 213 (488)
-||.++|.. .+.+++++++|.++.|.+.+|.-+- ... -..+=+.|..|++..+|.|.+.+ +.+ .....
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~ 101 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEP 101 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-ccc--------ccccc
Confidence 478888865 5678999999999999999987762 222 12233457899999999988763 211 11233
Q ss_pred CCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC-
Q 011349 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY- 292 (488)
Q Consensus 214 ~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~- 292 (488)
.+.+||... ...+.+.-|||||++||.-+--..|... +...++.|.+||..|...
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e-----------------------E~eLS~~LE~LL~~Mt~~~ 157 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE-----------------------ERELSPPLEQLIDHMANTV 157 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE-----------------------EECCCHHHHHHHHHHTTCC
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc-----------------------chhhCHHHHHHHHHHHhcc
Confidence 567888764 3455677899999999999877654221 123357788899888755
Q ss_pred ------------------------CCCCCCCHHHHHHHhc
Q 011349 293 ------------------------EPRERPNAKSLVASLT 308 (488)
Q Consensus 293 ------------------------dp~~Rps~~~il~~l~ 308 (488)
.+..|++.++|++.-.
T Consensus 158 ~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~ 197 (229)
T 2yle_A 158 EADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCA 197 (229)
T ss_dssp C--------------------CCSCCCCCCSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCcCCHHHHHHHHH
Confidence 2457788888887654
No 486
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.69 E-value=0.00015 Score=57.74 Aligned_cols=81 Identities=10% Similarity=-0.088 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHhcCChHH---HHHHHHHhhccC-CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPT---AIECYTHFIDGG-TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~---A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
...+.++.|.++....+... +|..++..+..+ |...-...+.+|..++++|+|++|+.+++..|+.+|+|.+|.--
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~L 113 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 113 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 35678889999998887766 999999999887 63377889999999999999999999999999999999998766
Q ss_pred HHHHH
Q 011349 458 QAAAL 462 (488)
Q Consensus 458 ~g~~~ 462 (488)
+..+-
T Consensus 114 k~~i~ 118 (126)
T 1nzn_A 114 ERLID 118 (126)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 487
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.68 E-value=5.7e-05 Score=72.25 Aligned_cols=77 Identities=14% Similarity=0.102 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.++..+...|..++..|++++|+..+++|+.++| +..+|..+|.++...|++++|++.|++|+.++|.....++..+
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~--s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~ 351 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM--SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIEN 351 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhC
Confidence 4566777788888889999999999999999997 5677888999999999999999999999999999865443333
No 488
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.66 E-value=0.00013 Score=68.84 Aligned_cols=72 Identities=13% Similarity=0.109 Sum_probs=46.9
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCC-cccccceecCCeeeEEEecC-CCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERL-VNLIGCCCEGEERLLVAEFM-PNET 136 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~gs 136 (488)
++.|+.|..+.+|+. ..+++|+...... ......+|+.+++.+...++ +++++++ .+.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 567788999999998 4488898865321 11234578888888853333 4666543 33457899999 7655
Q ss_pred hh
Q 011349 137 LS 138 (488)
Q Consensus 137 L~ 138 (488)
|.
T Consensus 95 l~ 96 (301)
T 3dxq_A 95 MS 96 (301)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 489
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.65 E-value=6.3e-05 Score=73.91 Aligned_cols=98 Identities=16% Similarity=-0.006 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..|++.+.++...|+|+.|..+..+ |...|+ . ...+..+|.+.|++++|+..+++++.+++.+..++..+|.
T Consensus 175 ~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad-~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~i 249 (449)
T 1b89_A 175 NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHAD-E---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAI 249 (449)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHH-H---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHh-h---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 5678999999999999999999888876 446776 3 3357788999999999999999999999999999999999
Q ss_pred HHH--hCCChHHHHHHHHHhhcccc
Q 011349 461 ALF--GLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 461 ~~~--~~~~~~~A~~~~~~al~l~p 483 (488)
+|. +.++..|+++.|...+.+.|
T Consensus 250 l~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 250 LYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp HHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 884 57788999999988888776
No 490
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.64 E-value=5.6e-05 Score=75.11 Aligned_cols=85 Identities=12% Similarity=-0.063 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc-----CCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-----C
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI-----S 448 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~ 448 (488)
.-+..+.+.|.++..+|+|++|+..|++++++ .|++ -...++|+|.+|..+|++++|+..+++|+++ .
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG 406 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHG 406 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 45778899999999999999999999999953 3431 4467999999999999999999999999965 5
Q ss_pred CCCH---HHHHHHHHHHHhC
Q 011349 449 PDWP---TAFYLQAAALFGL 465 (488)
Q Consensus 449 p~~~---~a~~~~g~~~~~~ 465 (488)
|+++ +++.+++.++..+
T Consensus 407 ~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 407 REHSLIEDLILLLEECDANI 426 (429)
T ss_dssp TTSHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHH
Confidence 7765 4556677666543
No 491
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.58 E-value=9.4e-05 Score=73.41 Aligned_cols=74 Identities=11% Similarity=0.041 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc-----CCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-----C
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI-----S 448 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~ 448 (488)
.-+..+.+.|.+|..+|+|++|+..|++++++ .|++ -+..++|+|.+|..+|+|++|+..|++|+++ .
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG 417 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHG 417 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcC
Confidence 55788999999999999999999999999953 4441 4467999999999999999999999999975 5
Q ss_pred CCCHHH
Q 011349 449 PDWPTA 454 (488)
Q Consensus 449 p~~~~a 454 (488)
|+++..
T Consensus 418 ~~Hp~~ 423 (433)
T 3qww_A 418 KDHPYI 423 (433)
T ss_dssp TTCHHH
T ss_pred CCChHH
Confidence 777653
No 492
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.55 E-value=0.0003 Score=67.34 Aligned_cols=77 Identities=8% Similarity=-0.039 Sum_probs=42.0
Q ss_pred cccCCCCCCce-EEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC--CCcccccceecCCeeeEEEecCCCC
Q 011349 59 VSEHGEKAPNV-VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE--RLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 59 ~~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
++.|+.|.... +|+....+|..+++|...... ...+..|+.+++.+... .+++++.+....+ ++|||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 34565554444 667765446667777654332 13455677888777432 3566776543333 7899999776
Q ss_pred Chhhh
Q 011349 136 TLSKH 140 (488)
Q Consensus 136 sL~~~ 140 (488)
++.+.
T Consensus 98 ~l~~~ 102 (333)
T 3csv_A 98 LFTEV 102 (333)
T ss_dssp BHHHH
T ss_pred chHHH
Confidence 66543
No 493
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.50 E-value=0.00036 Score=67.86 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=84.0
Q ss_pred cccCCCCCCceEEEEEeC--------CCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEE
Q 011349 59 VSEHGEKAPNVVYKGLVD--------EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 129 (488)
++.+..|-...+|++... +++.|.+|+.... ......+.+|..+++.+. +.-.+++++.+.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 456777888999999864 2467999986432 234566779999999985 3334667766543 2899
Q ss_pred ecCCCCChhhh-h----------------ccCC---CCCC--CHHHHHHHHHHHHH-------------------HHHHH
Q 011349 130 EFMPNETLSKH-L----------------FHWE---NQPM--KWAMRVRVALYLAQ-------------------ALDYC 168 (488)
Q Consensus 130 e~~~~gsL~~~-l----------------~~~~---~~~l--~~~~~~~i~~~i~~-------------------~l~~L 168 (488)
||++|.+|... + +... .... -+.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998766421 1 0000 1112 24556666554422 23333
Q ss_pred H----hCC---CcccccccCCceeecCC----CCCeeccCCCcc
Q 011349 169 S----SKG---RALYHDLNTYRILFDQD----GNPRLSCFGLMK 201 (488)
Q Consensus 169 H----~~~---~iiH~Dlkp~Nill~~~----~~~kl~Dfgla~ 201 (488)
. ..+ .++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2 221 17999999999999876 788999999864
No 494
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.47 E-value=0.00036 Score=55.79 Aligned_cols=82 Identities=5% Similarity=-0.185 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHhcCC---hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKD---FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
.+.+-++.|.++.+..+ ..++|..++..++.+|...-..++.+|..+.++|+|++|.++.+..++..|+|..|.--+
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 35677778877776654 457888888888888854677888888889999999999999999999999988876655
Q ss_pred HHHHH
Q 011349 459 AAALF 463 (488)
Q Consensus 459 g~~~~ 463 (488)
..+-.
T Consensus 119 ~~Ie~ 123 (134)
T 3o48_A 119 SMVED 123 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 495
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.46 E-value=0.00076 Score=54.62 Aligned_cols=80 Identities=5% Similarity=-0.160 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHhcCC---hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKD---FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
.+.+.++.|.++.+..+ -.++|..++..+..+|...-...+.+|..+.++|+|++|.++++..|+..|+|.+|.--+
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 45666777777776554 346777777777777754666777777888888888888888888888888777665544
Q ss_pred HHH
Q 011349 459 AAA 461 (488)
Q Consensus 459 g~~ 461 (488)
..+
T Consensus 118 ~~I 120 (144)
T 1y8m_A 118 SMV 120 (144)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 496
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.44 E-value=0.00056 Score=67.95 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=52.2
Q ss_pred cccCCCCCCceEEEEEeCC--------CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCC-cccccceecCCeeeEEE
Q 011349 59 VSEHGEKAPNVVYKGLVDE--------DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERL-VNLIGCCCEGEERLLVA 129 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 129 (488)
++.|+.|....||++...+ +..+.+|+.... .....+.+|..+++.+...++ +++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4567888889999998653 467999988432 122567789999999854444 667765542 3899
Q ss_pred ecCCCCChh
Q 011349 130 EFMPNETLS 138 (488)
Q Consensus 130 e~~~~gsL~ 138 (488)
||++|.+|.
T Consensus 152 e~l~G~~l~ 160 (429)
T 1nw1_A 152 EYIPSRPLS 160 (429)
T ss_dssp CCCCEEECC
T ss_pred EEeCCcccC
Confidence 999975553
No 497
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.42 E-value=0.0012 Score=53.37 Aligned_cols=70 Identities=9% Similarity=-0.033 Sum_probs=62.8
Q ss_pred chHHHhcHHHHHHhhCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 417 SPTVFARRCLCYLLSDMP---QEALGDAMQAQVISPD-WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~l~p~-~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
....-++.|-++.+..+. .++|..++..++-.|. .-+.+|.+|.+++++|+|++|..+.+..|+.+|++.
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~ 111 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 111 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcH
Confidence 677888999999988764 4799999999999994 568999999999999999999999999999999875
No 498
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.38 E-value=0.0013 Score=63.00 Aligned_cols=68 Identities=10% Similarity=0.026 Sum_probs=45.4
Q ss_pred CCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC---CCCcccccc------eecCCeeeEEEecCC
Q 011349 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS---ERLVNLIGC------CCEGEERLLVAEFMP 133 (488)
Q Consensus 63 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~------~~~~~~~~lv~e~~~ 133 (488)
|.|....||+....+| .+++|+...... ..|+.+++.|.. |++++.+.. ....+..++||+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4555789999987677 799998765431 356666766632 224555432 123467899999999
Q ss_pred CCCh
Q 011349 134 NETL 137 (488)
Q Consensus 134 ~gsL 137 (488)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8766
No 499
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.37 E-value=0.0011 Score=52.97 Aligned_cols=70 Identities=9% Similarity=-0.033 Sum_probs=62.4
Q ss_pred chHHHhcHHHHHHhhCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 417 SPTVFARRCLCYLLSDMP---QEALGDAMQAQVISPD-WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~l~p~-~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+.+-++.|-++.+..+. .++|..++..++.+|. .-+.+|.+|.+++++|+|++|..+.+..|+++|++.
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~ 112 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 112 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCH
Confidence 667888898888888764 4799999999999995 478999999999999999999999999999999875
No 500
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.37 E-value=0.0012 Score=65.93 Aligned_cols=75 Identities=12% Similarity=0.063 Sum_probs=49.3
Q ss_pred cccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCC-cccccceecCCeeeEEEecCCCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERL-VNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
++.|+.|-...+|++...+ +..+++|+..... ...-.-.+|..+++.+...++ +++++.+. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCcc
Confidence 3467788889999998755 4678899875432 111123689999999965444 56777663 2 35999999866
Q ss_pred hh
Q 011349 137 LS 138 (488)
Q Consensus 137 L~ 138 (488)
|.
T Consensus 188 l~ 189 (458)
T 2qg7_A 188 LS 189 (458)
T ss_dssp CC
T ss_pred CC
Confidence 53
Done!