Your job contains 1 sequence.
>011352
MTQDVEMKDKENPSNSLSSPFTPSTLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRR
KLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIY
CYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAE
IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC
RYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRLLLGEIPERTV
FMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGL
RNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETG
DIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQEQELAKHI
AEEDDDEF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011352
(488 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198561 - symbol:EMB2719 "EMBRYO DEFECTIVE 271... 1886 1.0e-194 1
TAIR|locus:2204385 - symbol:AT1G75990 species:3702 "Arabi... 1861 4.6e-192 1
ZFIN|ZDB-GENE-040426-1444 - symbol:psmd3 "proteasome (pro... 925 7.0e-93 1
UNIPROTKB|Q2KJ46 - symbol:PSMD3 "26S proteasome non-ATPas... 910 2.7e-91 1
UNIPROTKB|E2QUY7 - symbol:PSMD3 "Uncharacterized protein"... 910 2.7e-91 1
UNIPROTKB|O43242 - symbol:PSMD3 "26S proteasome non-ATPas... 910 2.7e-91 1
MGI|MGI:98858 - symbol:Psmd3 "proteasome (prosome, macrop... 909 3.5e-91 1
RGD|1311470 - symbol:Psmd3 "proteasome (prosome, macropai... 909 3.5e-91 1
UNIPROTKB|F1RXA7 - symbol:LOC100512253 "Uncharacterized p... 904 1.2e-90 1
FB|FBgn0261396 - symbol:Rpn3 "Regulatory particle non-ATP... 873 2.3e-87 1
DICTYBASE|DDB_G0288621 - symbol:psmD3 "26S proteasome non... 843 3.4e-84 1
UNIPROTKB|B4DT72 - symbol:PSMD3 "26S proteasome non-ATPas... 800 1.2e-79 1
ASPGD|ASPL0000036390 - symbol:AN10337 species:162425 "Eme... 788 2.3e-78 1
POMBASE|SPBC119.01 - symbol:rpn3 "19S proteasome regulato... 783 7.9e-78 1
UNIPROTKB|I3LL55 - symbol:I3LL55 "Uncharacterized protein... 742 1.7e-73 1
UNIPROTKB|G4NDR0 - symbol:MGG_00884 "26S proteasome non-A... 725 1.1e-71 1
GENEDB_PFALCIPARUM|MAL13P1.190 - symbol:MAL13P1.190 "prot... 702 3.0e-69 1
UNIPROTKB|Q8IDV2 - symbol:MAL13P1.190 "Proteasome regulat... 702 3.0e-69 1
CGD|CAL0001433 - symbol:RPN3 species:5476 "Candida albica... 700 4.9e-69 1
WB|WBGene00004460 - symbol:rpn-3 species:6239 "Caenorhabd... 700 4.9e-69 1
UNIPROTKB|Q04908 - symbol:rpn-3 "26S proteasome non-ATPas... 700 4.9e-69 1
UNIPROTKB|H9L061 - symbol:H9L061 "Uncharacterized protein... 478 4.7e-68 2
UNIPROTKB|H9L164 - symbol:H9L164 "Uncharacterized protein... 641 8.8e-63 1
SGD|S000000823 - symbol:RPN3 "non-ATPase regulatory subun... 533 2.4e-51 1
FB|FBgn0027055 - symbol:CSN3 "COP9 complex homolog subuni... 151 1.3e-07 1
DICTYBASE|DDB_G0291848 - symbol:csn3 "proteasome componen... 143 9.1e-07 1
UNIPROTKB|E2RD70 - symbol:COPS3 "Uncharacterized protein"... 143 9.3e-07 1
UNIPROTKB|Q9UNS2 - symbol:COPS3 "COP9 signalosome complex... 143 9.3e-07 1
MGI|MGI:1349409 - symbol:Cops3 "COP9 (constitutive photom... 143 9.3e-07 1
RGD|1303002 - symbol:Cops3 "COP9 signalosome subunit 3" s... 143 9.3e-07 1
UNIPROTKB|Q5ZJF1 - symbol:COPS3 "COP9 signalosome complex... 142 1.2e-06 1
UNIPROTKB|A6H7B5 - symbol:COPS3 "COP9 signalosome complex... 138 3.3e-06 1
ZFIN|ZDB-GENE-030131-7660 - symbol:cops3 "COP9 constituti... 137 4.3e-06 1
UNIPROTKB|F1SB16 - symbol:COPS3 "Uncharacterized protein"... 135 7.1e-06 1
TAIR|locus:2145638 - symbol:COP13 "AT5G14250" species:370... 119 0.00042 1
DICTYBASE|DDB_G0284241 - symbol:DDB_G0284241 "proteasome ... 116 0.00091 1
>TAIR|locus:2198561 [details] [associations]
symbol:EMB2719 "EMBRYO DEFECTIVE 2719" species:3702
"Arabidopsis thaliana" [GO:0000502 "proteasome complex"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
EMBL:AC022472 InterPro:IPR013143 SMART:SM00753 EMBL:AY120740
IPI:IPI00528285 PIR:G86335 RefSeq:NP_173447.1 UniGene:At.15440
ProteinModelPortal:Q9LNU4 SMR:Q9LNU4 IntAct:Q9LNU4 STRING:Q9LNU4
PaxDb:Q9LNU4 PRIDE:Q9LNU4 ProMEX:Q9LNU4 EnsemblPlants:AT1G20200.1
GeneID:838609 KEGG:ath:AT1G20200 TAIR:At1g20200 eggNOG:NOG251646
HOGENOM:HOG000193909 InParanoid:Q9LNU4 KO:K03033 OMA:NYLSTSH
PhylomeDB:Q9LNU4 ProtClustDB:CLSN2682716 Genevestigator:Q9LNU4
GermOnline:AT1G20200 Uniprot:Q9LNU4
Length = 488
Score = 1886 (669.0 bits), Expect = 1.0e-194, P = 1.0e-194
Identities = 375/489 (76%), Positives = 415/489 (84%)
Query: 1 MTQDVEMKDKENPSNSLSSPFTPSTLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRR 60
MTQDVEMKD PS S+ S T ST+ +LKEIA+L++TG++ +EVRRI RAVRLT+ LR+
Sbjct: 1 MTQDVEMKDNNTPSQSIISSST-STMQNLKEIAALIDTGSYTKEVRRIARAVRLTIGLRQ 59
Query: 61 KLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEHEMEVDTASSGAPA-PAKHPLPELEI 119
KL VLS+FL+FAL PGSEAHSRL S++PK DEH+MEVDTASS A P+KH ELEI
Sbjct: 60 KLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEHDMEVDTASSATQAAPSKHLPAELEI 119
Query: 120 YCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLA 179
YCY +VL+FLID+K+YNEAKACSSASIARLKN+NRRT+DV+A+RLYFYYSL YE TGDLA
Sbjct: 120 YCYFIVLLFLIDQKKYNEAKACSSASIARLKNVNRRTIDVIASRLYFYYSLSYEQTGDLA 179
Query: 180 EIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQF 239
EIRG LLALH ATLRHDELGQET DQAEKLRSKAPRFEAHSNQQF
Sbjct: 180 EIRGTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 239
Query: 240 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRLLLGEIPERT 299
CRYLFYLGKIRTIQLEYTDAKESLLQAARKAP+AALGFR+QCNKWAI+VRLLLGEIPER+
Sbjct: 240 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRIQCNKWAILVRLLLGEIPERS 299
Query: 300 VFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTG 359
+F QKGMEKALRPYFELTNAVRIGDLELF++V EKF TF+ DRT+NLIVRLRHNVIRTG
Sbjct: 300 IFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIVRLRHNVIRTG 359
Query: 360 LRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKET 419
LRNISISYSRISL DVAKKLRL+S NPVADAESIV+KAIRDGAIDAT+DH NG MVSKET
Sbjct: 360 LRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKAIRDGAIDATIDHKNGCMVSKET 419
Query: 420 GDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKH 479
GDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+H LAKH
Sbjct: 420 GDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHKEKESDEKRRERKQQEEELAKH 479
Query: 480 IAEEDDDEF 488
+AEEDDD+F
Sbjct: 480 MAEEDDDDF 488
>TAIR|locus:2204385 [details] [associations]
symbol:AT1G75990 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0030234 EMBL:AC007396 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0030163 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646
HOGENOM:HOG000193909 KO:K03033 ProtClustDB:CLSN2682716
EMBL:AY057508 IPI:IPI00526971 PIR:E96788 RefSeq:NP_177726.1
UniGene:At.15402 ProteinModelPortal:Q9LQR8 SMR:Q9LQR8 IntAct:Q9LQR8
STRING:Q9LQR8 PaxDb:Q9LQR8 PRIDE:Q9LQR8 EnsemblPlants:AT1G75990.1
GeneID:843931 KEGG:ath:AT1G75990 TAIR:At1g75990 InParanoid:Q9LQR8
OMA:LKHDNET PhylomeDB:Q9LQR8 Genevestigator:Q9LQR8
GermOnline:AT1G75990 Uniprot:Q9LQR8
Length = 487
Score = 1861 (660.2 bits), Expect = 4.6e-192, P = 4.6e-192
Identities = 368/488 (75%), Positives = 413/488 (84%)
Query: 1 MTQDVEMKDKENPSNSLSSPFTPSTLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRR 60
MTQDVEMKD + P+ S+ S T STL +LKEIA+L++TG++ +EVRRI RAVRLT+ LRR
Sbjct: 1 MTQDVEMKDNQTPTQSVVSAPT-STLQNLKEIAALIDTGSYTKEVRRIARAVRLTVGLRR 59
Query: 61 KLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIY 120
KL V+S+FL+FAL PGSEAH+RL S++PK DEH+MEVDTASS + AP KH ELEIY
Sbjct: 60 KLTGSVISSFLDFALVPGSEAHTRLSSFVPKSDEHDMEVDTASSNSQAPPKHLPAELEIY 119
Query: 121 CYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAE 180
CY +VL+FLID+K+YNEAK CS+ASIARLK++NRRTVDV+A++LYFYYSL YELT DLAE
Sbjct: 120 CYFIVLLFLIDQKKYNEAKVCSTASIARLKSVNRRTVDVIASKLYFYYSLSYELTNDLAE 179
Query: 181 IRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFC 240
IR LLALH ATLRHDELGQET DQAEKLRSKAPRFEAHSNQQFC
Sbjct: 180 IRSTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFC 239
Query: 241 RYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRLLLGEIPERTV 300
RYLFYLGKIRTIQLEYTDAKESLLQAARKAPVA+LGFR+QCNKWAIIVRLLLGEIPER++
Sbjct: 240 RYLFYLGKIRTIQLEYTDAKESLLQAARKAPVASLGFRIQCNKWAIIVRLLLGEIPERSI 299
Query: 301 FMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGL 360
F QKGMEK LRPYFELTNAVRIGDLELF + EKF+ TF+ DRT+NLIVRLRHNVIRTGL
Sbjct: 300 FTQKGMEKTLRPYFELTNAVRIGDLELFGKIQEKFAKTFAEDRTHNLIVRLRHNVIRTGL 359
Query: 361 RNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETG 420
RNISISYSRISL DVA+KLRL+SANPVADAESIV+KAIRDGAIDAT+DH NG MVSKETG
Sbjct: 360 RNISISYSRISLQDVAQKLRLNSANPVADAESIVAKAIRDGAIDATIDHKNGCMVSKETG 419
Query: 421 DIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHI 480
DIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+H LAK++
Sbjct: 420 DIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHREKESEEKRREMKQQEEELAKYM 479
Query: 481 AEEDDDEF 488
AEEDDD+F
Sbjct: 480 AEEDDDDF 487
>ZFIN|ZDB-GENE-040426-1444 [details] [associations]
symbol:psmd3 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 3" species:7955 "Danio rerio" [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
ZFIN:ZDB-GENE-040426-1444 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 Gene3D:1.25.40.10 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 HOGENOM:HOG000193909
KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703
EMBL:FP017234 EMBL:BC056598 EMBL:BC066451 IPI:IPI00507046
RefSeq:NP_956866.1 UniGene:Dr.13797 Ensembl:ENSDART00000027158
GeneID:393544 KEGG:dre:393544 InParanoid:Q6NYV1 NextBio:20814565
Uniprot:Q6NYV1
Length = 503
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 206/488 (42%), Positives = 291/488 (59%)
Query: 3 QDVEMKDKENPSNSLSSPFTPSTLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKL 62
QDVEMK++E + +TL ++E +E +E R ++RA+R + R+L
Sbjct: 21 QDVEMKEEEQRG---ARELDQTTLDDIREHVKQIEKAVSGKEPRFVLRALRALPSTSRRL 77
Query: 63 KAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIYCY 122
VL ++ + LL +L + E E +V A A +PE+E Y
Sbjct: 78 NTNVLHKAVSGFFTANAAGKEFLLGFLEQPVEIEGDVPFRPRTGKAAAVPLIPEVEAYLQ 137
Query: 123 LLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIR 182
LL +++L + K Y EA+ S + ++ + NRR +D++AA+ Y+Y+S YE L +R
Sbjct: 138 LLTVVYLTNNKHYTEAQKVSDDLLQKIGSQNRRALDLVAAKCYYYHSRVYEFLNQLDVVR 197
Query: 183 GNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRY 242
L R ATLRHD GQ T DQAEKL SK+ E +N ++ RY
Sbjct: 198 SFLHTRLRTATLRHDADGQATLLNLLLRNYLQYNLYDQAEKLVSKSVFPELANNNEWARY 257
Query: 243 LFYLGKIRTIQLEYTDAKESLLQAARKAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVF 301
L+Y G+I+ IQLEY++A+ +L A RKAP A+GF+ +K I+V LLLGEIP+R F
Sbjct: 258 LYYTGRIKAIQLEYSEARRTLTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQF 317
Query: 302 MQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLR 361
Q ++++L PYF LT AVR G+L F V ++F F +D T LI+RLRHNVI+TG+R
Sbjct: 318 RQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVR 377
Query: 362 NISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGD 421
IS+SYSRISLAD+A+KL+LDS DAE IV+KAIRDG I+A+++H G++ SKET D
Sbjct: 378 MISLSYSRISLADIAQKLQLDSPE---DAEFIVAKAIRDGVIEASINHEKGFVQSKETMD 434
Query: 422 IYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXX-LAKHI 480
IYST EPQLAF+ RIAFCL++HN +V+A+RFPP ++ AK +
Sbjct: 435 IYSTREPQLAFHQRIAFCLDIHNMSVKAMRFPPKAYNKDLESAEERREREQQDLEFAKEM 494
Query: 481 AEEDDDEF 488
AE+DDD F
Sbjct: 495 AEDDDDSF 502
>UNIPROTKB|Q2KJ46 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
Gene3D:1.25.40.10 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033
EMBL:BC105526 IPI:IPI00707518 RefSeq:NP_001039365.1
UniGene:Bt.51586 ProteinModelPortal:Q2KJ46 STRING:Q2KJ46
PRIDE:Q2KJ46 Ensembl:ENSBTAT00000028608 GeneID:504937
KEGG:bta:504937 CTD:5709 GeneTree:ENSGT00490000043406
HOVERGEN:HBG000703 InParanoid:Q2KJ46 OMA:NQSVKAM OrthoDB:EOG4VHK6D
NextBio:20866898 Uniprot:Q2KJ46
Length = 534
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 199/466 (42%), Positives = 283/466 (60%)
Query: 25 TLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSR 84
TL +KE +E +E R ++RA+R+ + R+L VL ++ +
Sbjct: 71 TLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDF 130
Query: 85 LLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSA 144
LL +L + + E ++ A + LPE+E Y LL++IFL++ KRY EA+ S
Sbjct: 131 LLPFLEEPMDTEADLQFRPRTGKAASAPLLPEVEAYLQLLMVIFLMNSKRYKEAQKISDD 190
Query: 145 SIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETX 204
+ ++ NRR +D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 191 LMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDTDGQATL 250
Query: 205 XXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLL 264
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++
Sbjct: 251 LNLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMT 310
Query: 265 QAARKAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIG 323
A RKAP A+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G
Sbjct: 311 NALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTG 370
Query: 324 DLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDS 383
+L F V ++F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS
Sbjct: 371 NLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDS 430
Query: 384 ANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMH 443
DAE IV+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++H
Sbjct: 431 PE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIH 487
Query: 444 NEAVRALRFPPNSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 488
N +V+A+RFPP S+ AK +AE+DDD F
Sbjct: 488 NMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 533
>UNIPROTKB|E2QUY7 [details] [associations]
symbol:PSMD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
Gene3D:1.25.40.10 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406
OMA:NQSVKAM EMBL:AAEX03006469 RefSeq:XP_548138.2
Ensembl:ENSCAFT00000025807 GeneID:491018 KEGG:cfa:491018
Uniprot:E2QUY7
Length = 534
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 199/466 (42%), Positives = 283/466 (60%)
Query: 25 TLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSR 84
TL +KE +E +E R ++RA+R+ + R+L VL ++ +
Sbjct: 71 TLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDF 130
Query: 85 LLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSA 144
LL +L + + E ++ A + LPE+E Y LL++IFL++ KRY EA+ S
Sbjct: 131 LLPFLEEPMDTEADLQFRPRTGKAASAPLLPEVEAYLQLLMVIFLMNSKRYKEAQKISDD 190
Query: 145 SIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETX 204
+ ++ NRR +D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 191 LMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATL 250
Query: 205 XXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLL 264
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++
Sbjct: 251 LNLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMT 310
Query: 265 QAARKAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIG 323
A RKAP A+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G
Sbjct: 311 NALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTG 370
Query: 324 DLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDS 383
+L F V ++F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS
Sbjct: 371 NLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDS 430
Query: 384 ANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMH 443
DAE IV+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++H
Sbjct: 431 PE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIH 487
Query: 444 NEAVRALRFPPNSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 488
N +V+A+RFPP S+ AK +AE+DDD F
Sbjct: 488 NMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 533
>UNIPROTKB|O43242 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0030234 GO:GO:0005654 GO:GO:0002479
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 EMBL:CH471152 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909
KO:K03033 CTD:5709 HOVERGEN:HBG000703 OMA:NQSVKAM OrthoDB:EOG4VHK6D
EMBL:D67025 EMBL:BT007217 EMBL:AK022896 EMBL:BC000074 EMBL:BC004859
EMBL:BC012302 EMBL:BC020518 EMBL:BC025686 IPI:IPI00011603
RefSeq:NP_002800.2 UniGene:Hs.12970 ProteinModelPortal:O43242
DIP:DIP-27571N IntAct:O43242 MINT:MINT-5003834 STRING:O43242
PhosphoSite:O43242 PaxDb:O43242 PeptideAtlas:O43242 PRIDE:O43242
DNASU:5709 Ensembl:ENST00000264639 GeneID:5709 KEGG:hsa:5709
UCSC:uc002htn.1 GeneCards:GC17P038137 HGNC:HGNC:9560 HPA:CAB017038
neXtProt:NX_O43242 PharmGKB:PA38123 InParanoid:O43242
PhylomeDB:O43242 ChiTaRS:PSMD3 GenomeRNAi:5709 NextBio:22182
ArrayExpress:O43242 Bgee:O43242 CleanEx:HS_PSMD3
Genevestigator:O43242 GermOnline:ENSG00000108344 Uniprot:O43242
Length = 534
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 199/466 (42%), Positives = 282/466 (60%)
Query: 25 TLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSR 84
TL +KE +E +E R ++RA+R+ + R+L VL + +
Sbjct: 71 TLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDF 130
Query: 85 LLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSA 144
LL +L + + E ++ A + LPE+E Y LLV+IF+++ KRY EA+ S
Sbjct: 131 LLPFLEEPMDTEADLQFRPRTGKAASTPLLPEVEAYLQLLVVIFMMNSKRYKEAQKISDD 190
Query: 145 SIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETX 204
+ ++ NRR +D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 191 LMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATL 250
Query: 205 XXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLL 264
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++
Sbjct: 251 LNLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMT 310
Query: 265 QAARKAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIG 323
A RKAP A+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G
Sbjct: 311 NALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTG 370
Query: 324 DLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDS 383
+L F V ++F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS
Sbjct: 371 NLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDS 430
Query: 384 ANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMH 443
DAE IV+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++H
Sbjct: 431 PE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIH 487
Query: 444 NEAVRALRFPPNSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 488
N +V+A+RFPP S+ AK +AE+DDD F
Sbjct: 488 NMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 533
>MGI|MGI:98858 [details] [associations]
symbol:Psmd3 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 MGI:MGI:98858 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 EMBL:CH466556
Gene3D:1.25.40.10 GO:GO:0042176 EMBL:AL590963 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909
KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703
OMA:NQSVKAM OrthoDB:EOG4VHK6D ChiTaRS:PSMD3 EMBL:M25149
EMBL:AK145488 EMBL:AK164593 EMBL:AK165520 EMBL:AK166683
EMBL:AK166714 EMBL:AK167285 EMBL:AK169690 EMBL:BC003197
IPI:IPI00314439 PIR:I49504 RefSeq:NP_033465.1 UniGene:Mm.12194
ProteinModelPortal:P14685 IntAct:P14685 STRING:P14685
PhosphoSite:P14685 PaxDb:P14685 PRIDE:P14685
Ensembl:ENSMUST00000017365 GeneID:22123 KEGG:mmu:22123
InParanoid:Q3TP95 NextBio:301989 Bgee:P14685 Genevestigator:P14685
GermOnline:ENSMUSG00000017221 Uniprot:P14685
Length = 530
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 199/466 (42%), Positives = 283/466 (60%)
Query: 25 TLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSR 84
TL +KE +E +E R ++RA+R+ + R+L VL ++ +
Sbjct: 67 TLEDIKEHVRQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDF 126
Query: 85 LLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSA 144
LL +L + + E ++ A + LPE+E Y LL++IFL++ KRY EA+ S
Sbjct: 127 LLPFLEEPMDTEADLQFRPRTGKAASAPLLPEVEAYLQLLMVIFLMNSKRYKEAQKISDD 186
Query: 145 SIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETX 204
+ ++ NRR +D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 187 LMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATL 246
Query: 205 XXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLL 264
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++
Sbjct: 247 LNLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMT 306
Query: 265 QAARKAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIG 323
A RKAP A+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G
Sbjct: 307 NALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTG 366
Query: 324 DLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDS 383
+L F V ++F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS
Sbjct: 367 NLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDS 426
Query: 384 ANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMH 443
DAE IV+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++H
Sbjct: 427 PE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIH 483
Query: 444 NEAVRALRFPPNSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 488
N +V+A+RFPP S+ AK +AE+DDD F
Sbjct: 484 NMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 529
>RGD|1311470 [details] [associations]
symbol:Psmd3 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=IEA;ISO] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 RGD:1311470 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 Gene3D:1.25.40.10 GO:GO:0000502
GO:GO:0042176 EMBL:CH473948 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 CTD:5709
GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703 OMA:NQSVKAM
OrthoDB:EOG4VHK6D EMBL:BC085881 IPI:IPI00370009
RefSeq:NP_001008282.1 UniGene:Rn.101332 IntAct:Q5U2S7 STRING:Q5U2S7
Ensembl:ENSRNOT00000039836 GeneID:287670 KEGG:rno:287670
UCSC:RGD:1311470 InParanoid:Q5U2S7 NextBio:626775
Genevestigator:Q5U2S7 Uniprot:Q5U2S7
Length = 530
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 199/466 (42%), Positives = 283/466 (60%)
Query: 25 TLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSR 84
TL +KE +E +E R ++RA+R+ + R+L VL ++ +
Sbjct: 67 TLEDIKEHVRQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDF 126
Query: 85 LLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSA 144
LL +L + + E ++ A + LPE+E Y LL++IFL++ KRY EA+ S
Sbjct: 127 LLPFLEEPMDTEADLQFRPRTGKAASAPLLPEVEAYLQLLMVIFLMNSKRYKEAQKISDD 186
Query: 145 SIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETX 204
+ ++ NRR +D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 187 LMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATL 246
Query: 205 XXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLL 264
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++
Sbjct: 247 LNLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMT 306
Query: 265 QAARKAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIG 323
A RKAP A+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G
Sbjct: 307 NALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTG 366
Query: 324 DLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDS 383
+L F V ++F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS
Sbjct: 367 NLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDS 426
Query: 384 ANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMH 443
DAE IV+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++H
Sbjct: 427 PE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIH 483
Query: 444 NEAVRALRFPPNSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 488
N +V+A+RFPP S+ AK +AE+DDD F
Sbjct: 484 NMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 529
>UNIPROTKB|F1RXA7 [details] [associations]
symbol:LOC100512253 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:CU928026
Ensembl:ENSSSCT00000019042 Uniprot:F1RXA7
Length = 536
Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
Identities = 201/468 (42%), Positives = 283/468 (60%)
Query: 25 TLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSR 84
TL +KE +E +E R ++RA+R+ + R+L VL ++ S
Sbjct: 71 TLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNSATRDF 130
Query: 85 LLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSA 144
LL +L + + E ++ A + LPE+E Y LLV+IFL++ KRY EA+ S
Sbjct: 131 LLPFLEEPMDTEADLQFRPRTGKAASAPLLPEVEAYLQLLVVIFLMNSKRYKEAQKISDD 190
Query: 145 SIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETX 204
+ ++ NRR +D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 191 LMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATL 250
Query: 205 XXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYL--GKIRTIQLEYTDAKES 262
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ +
Sbjct: 251 LNLLLRNYLHYNLYDQAEKLVSKSVFPEQANNNEWARYLYYTDPGRIKAIQLEYSEARRT 310
Query: 263 LLQAARKAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVR 321
+ A RKAP A+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR
Sbjct: 311 MTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVR 370
Query: 322 IGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRL 381
G+L F V ++F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+L
Sbjct: 371 TGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQL 430
Query: 382 DSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLN 441
DS DAE IV+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL+
Sbjct: 431 DSPE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLD 487
Query: 442 MHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 488
+HN +V+A+RFPP S+ AK +AE+DDD F
Sbjct: 488 IHNMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 535
>FB|FBgn0261396 [details] [associations]
symbol:Rpn3 "Regulatory particle non-ATPase 3" species:7227
"Drosophila melanogaster" [GO:0004175 "endopeptidase activity"
evidence=ISS;IDA] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS;IDA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0030234 EMBL:AE014134 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0004175
Gene3D:1.25.40.10 GO:GO:0008541 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 BRENDA:3.4.25.1 eggNOG:NOG251646 KO:K03033
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:M63010 EMBL:AY089337
EMBL:BT044249 PIR:JH0665 RefSeq:NP_477300.1 UniGene:Dm.4848
ProteinModelPortal:P25161 DIP:DIP-18295N IntAct:P25161
MINT:MINT-982894 STRING:P25161 PaxDb:P25161 PRIDE:P25161
EnsemblMetazoa:FBtr0302289 GeneID:35176 KEGG:dme:Dmel_CG42641
CTD:35176 FlyBase:FBgn0261396 InParanoid:Q8T460 OrthoDB:EOG4Z08MX
PhylomeDB:P25161 ChiTaRS:Rpn3 GenomeRNAi:35176 NextBio:792228
Bgee:P25161 GermOnline:CG10484 Uniprot:P25161
Length = 494
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 200/469 (42%), Positives = 279/469 (59%)
Query: 24 STLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFA--LAPGSEA 81
+ + ++E +E G ++E R I+R +R RRKL V F N A + P
Sbjct: 33 AAVQEIREQIRQIEKGVASKESRFILRVLRNLPNTRRKLNGVV---FRNLAQSIYPAGAD 89
Query: 82 HSRLLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKAC 141
++ +P ++ E+ A K P+ E++ Y YLL+L+ LID A
Sbjct: 90 REAAVALMPAVEKDATELPDVPKKQVA-TKAPIAEVDAYFYLLLLVKLIDASDLKRAGIS 148
Query: 142 SSASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQ 201
+ A +A++ NRRT+D++ A+ YFY+S EL L IR L A R ATLR+D GQ
Sbjct: 149 ADALMAKISIQNRRTLDLIGAKSYFYFSRVAELKNSLEGIRSFLHARLRTATLRNDFEGQ 208
Query: 202 ETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKE 261
DQA+KL K+ E+ SN ++ R+L+YLG+I+ +LEY+DA +
Sbjct: 209 AVLINCLLRNYLHYALYDQADKLVKKSVYPESASNNEWARFLYYLGRIKAAKLEYSDAHK 268
Query: 262 SLLQAARKAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAV 320
L+QA RK+P AA+GFR K I+V LLLG IPER VF Q G+ ++L YF+LT AV
Sbjct: 269 HLVQALRKSPQHAAIGFRQTVQKLIIVVELLLGNIPERVVFRQAGLRQSLGAYFQLTQAV 328
Query: 321 RIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLR 380
R+G+L+ F V ++ F D T LI+RLRHNVI+T +R+I +SYSRIS D+AK+L
Sbjct: 329 RLGNLKRFGDVVSQYGPKFQLDHTFTLIIRLRHNVIKTAIRSIGLSYSRISPQDIAKRLM 388
Query: 381 LDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCL 440
LDSA DAE IVSKAIRDG I+AT+D A +M SKE+ DIYST EPQLAF+ RI+FCL
Sbjct: 389 LDSAE---DAEFIVSKAIRDGVIEATLDPAQNFMRSKESTDIYSTREPQLAFHERISFCL 445
Query: 441 NMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 488
N+HN++V+A+R+PP S+ LAK +AE+D+D F
Sbjct: 446 NLHNQSVKAMRYPPKSYGKDLESAEERREREQQDLELAKEMAEDDEDGF 494
>DICTYBASE|DDB_G0288621 [details] [associations]
symbol:psmD3 "26S proteasome non-ATPase regulatory
subunit 3" species:44689 "Dictyostelium discoideum" [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 dictyBase:DDB_G0288621 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GenomeReviews:CM000154_GR EMBL:AAFI02000119 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 InterPro:IPR000082 GO:GO:0042176
InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646 KO:K03033
OMA:NQSVKAM RefSeq:XP_001134521.1 STRING:Q1ZXD3 PRIDE:Q1ZXD3
EnsemblProtists:DDB0232980 GeneID:8626718 KEGG:ddi:DDB_G0288621
Uniprot:Q1ZXD3
Length = 504
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 185/439 (42%), Positives = 273/439 (62%)
Query: 25 TLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSR 84
T LK+ L++ G +E+R I+ +R T ++R+KL VL+ +NFA + + A +
Sbjct: 33 TFADLKKNIGLIDKGVDTKEMRFIISVLRQTQSIRKKLNYKVLNQIVNFAFSHQNHATKK 92
Query: 85 --LLSYLPKEDEHEMEVDTASSG----APAPAKHPLP-ELEIYCYLLVLIFLIDKKRYNE 137
LLS+L K D M++D+ + P+ + L E+E Y +LLVLI+LID+K+Y +
Sbjct: 93 NFLLSFL-KSDGSSMDIDSTTQAEKETTPSSSSSHLNIEVESYIHLLVLIYLIDQKKYED 151
Query: 138 AKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHD 197
A CSSA + +++ R T+ L+++++FYYSL YE+T +L E+R LL+ R ATLRH+
Sbjct: 152 ATKCSSALMETVQSNTRITLYPLSSKIFFYYSLSYEMTNNLHEVRSTLLSALRTATLRHN 211
Query: 198 ELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYT 257
+ GQ T +QA+KL + E+ S+ QF RY +Y G+IR IQLEY
Sbjct: 212 DEGQATIINLLLRNYLEYNLFEQADKLLANTQFPESASSNQFARYFYYQGRIRAIQLEYA 271
Query: 258 DAKESLLQAARKAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFEL 316
++ + L QA RKAP A GFR K IV+LL+GEIPER F QK ++ AL+PYF L
Sbjct: 272 ESFKFLTQAIRKAPQNTAGGFRRTVYKLLSIVQLLMGEIPERNTFSQKQLKIALKPYFHL 331
Query: 317 TNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVA 376
T AVR+GDL F E+ S F SD+T L+ RLR NVI+ GL+ ++ +YSRIS D+
Sbjct: 332 TEAVRVGDLGSFNQALEQNSDIFKSDQTFTLVQRLRSNVIKAGLKKLNTAYSRISFNDIC 391
Query: 377 KKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRI 436
KL+ D D I++K I+DG IDAT+++ G++ S+E D YST EP AF++RI
Sbjct: 392 TKLKFDGTTQ--DIMFIIAKTIKDGVIDATINYEGGYLQSRENIDAYSTQEPLHAFSNRI 449
Query: 437 AFCLNMHNEAVRALRFPPN 455
CL +HN++++A+RF P+
Sbjct: 450 DICLKIHNDSLKAMRFHPD 468
>UNIPROTKB|B4DT72 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
EMBL:AC090844 InterPro:IPR013143 SMART:SM00753 HOVERGEN:HBG000703
UniGene:Hs.12970 HGNC:HGNC:9560 ChiTaRS:PSMD3 EMBL:AK300081
IPI:IPI01014869 STRING:B4DT72 Ensembl:ENST00000541736
Uniprot:B4DT72
Length = 356
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 166/336 (49%), Positives = 228/336 (67%)
Query: 114 LPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYE 173
LPE+E Y LLV+IF+++ KRY EA+ S + ++ NRR +D++AA+ Y+Y++ YE
Sbjct: 22 LPEVEAYLQLLVVIFMMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYE 81
Query: 174 LTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEA 233
L +R L A R ATLRHD GQ T DQAEKL SK+ E
Sbjct: 82 FLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYSLYDQAEKLVSKSVFPEQ 141
Query: 234 HSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AALGFRVQCNKWAIIVRLLL 292
+N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A+GF+ +K I+V LLL
Sbjct: 142 ANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL 201
Query: 293 GEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLR 352
GEIP+R F Q ++++L PYF LT AVR G+L F V ++F F +D T LI+RLR
Sbjct: 202 GEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLR 261
Query: 353 HNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANG 412
HNVI+TG+R IS+SYSRISLAD+A+KL+LDS DAE IV+KAIRDG I+A+++H G
Sbjct: 262 HNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIVAKAIRDGVIEASINHEKG 318
Query: 413 WMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVR 448
++ SKE DIYST EPQLAF+ RI+FCL++HN +V+
Sbjct: 319 YVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVK 354
>ASPGD|ASPL0000036390 [details] [associations]
symbol:AN10337 species:162425 "Emericella nidulans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 EMBL:BN001306 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 OMA:NYLSTSH EnsemblFungi:CADANIAT00010340
Uniprot:C8VJN4
Length = 641
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 199/504 (39%), Positives = 277/504 (54%)
Query: 4 DVEMK--DKENPSNSLSSPFTPSTLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRK 61
DV M+ + E P + + + +K +E + R +R +R A+R++
Sbjct: 138 DVSMEGAEDEKPGSEIDPKV--KAIQDIKTNFIFLERAVTHFDPRFTLRVLRSISAMRKQ 195
Query: 62 LKAPVLSAFLNFALAPGSEAHSRLLSYL--PKEDEH-----EMEVDTASSGAPAPAKHPL 114
+ + VL+ + A S S LL + P E+ MEV+ + P+ +K L
Sbjct: 196 ITSDVLAEAIVAAYPTSSATASFLLDAIDQPGASENVGSSSNMEVENDKT-KPS-SKEVL 253
Query: 115 PELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYEL 174
PE++IY +LV I+L D+K + S+ I RL+ +NRRT+D LAAR+YFYYSL +E
Sbjct: 254 PEIDIYLSILVQIYLYDRKEIQKGAKFSTRLIERLRALNRRTLDSLAARVYFYYSLFFEQ 313
Query: 175 TGDL--------AEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRS 226
L IR LLA R A LR D Q T QA+ L S
Sbjct: 314 IAPLPPSPAAAITSIRQPLLAALRTAVLRKDVDTQATVMTLLLRNYLSTSHISQADLLIS 373
Query: 227 KAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVA--ALGFRVQCNKW 284
+ SN Q RYL+YLG+IR IQL+YT+A L+ A RK+P + A GF +K
Sbjct: 374 HNQFPPSASNNQIARYLYYLGRIRAIQLQYTEAHGHLIGATRKSPASHSARGFYQASHKL 433
Query: 285 AIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRT 344
++V LL+G+IP+R +F Q +E+AL PYF L AV +GDL+ F ++ SSTF D T
Sbjct: 434 LVVVELLMGDIPDRAIFRQAALERALHPYFLLVQAVSVGDLDGFLNIVNTHSSTFRKDGT 493
Query: 345 NNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAID 404
LI+RLR NVI+TG+R +S+SYSRISL D+ +L LDS AE IV+KAIRDG I+
Sbjct: 494 YTLILRLRQNVIKTGIRMMSLSYSRISLRDICLRLGLDSEE---SAEYIVAKAIRDGVIE 550
Query: 405 ATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXX 464
A++DH G+M SK+ GD+Y+T EP F+ RI CL +H+E+V+A+RFP N H
Sbjct: 551 ASLDHERGFMKSKDVGDVYATREPGEVFHERIRACLGLHDESVKAMRFPMNQHRLELKSA 610
Query: 465 XXXXXXXXXXXLAKHIAEED-DDE 487
LAK I E D DDE
Sbjct: 611 QEARERERE--LAKEIQEGDIDDE 632
>POMBASE|SPBC119.01 [details] [associations]
symbol:rpn3 "19S proteasome regulatory subunit Rpn3"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=TAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008541 "proteasome regulatory particle,
lid subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 PomBase:SPBC119.01 GO:GO:0005634 GO:GO:0007346
GO:GO:0030234 GO:GO:0043161 EMBL:CU329671 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GenomeReviews:CU329671_GR
GO:GO:0008541 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 OMA:NQSVKAM
PIR:T39299 RefSeq:NP_595282.2 ProteinModelPortal:O42897
IntAct:O42897 STRING:O42897 EnsemblFungi:SPBC119.01.1
GeneID:2540109 KEGG:spo:SPBC119.01 OrthoDB:EOG4350FR
NextBio:20801245 Uniprot:O42897
Length = 497
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 185/461 (40%), Positives = 262/461 (56%)
Query: 1 MTQDVEMKDKENPSNSLSSPFTPST-LHHLK-EIASLMETGAHAREVRRIMRAVRLTMAL 58
+ Q+ + E N+++ P T L ++ IA+LM+ R+ R + R++R T +
Sbjct: 13 VNQEENVDSGETKQNTVTE--VPRTVLQDVEANIAALMQA-TKQRDPRLVYRSLRTTSNI 69
Query: 59 RRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELE 118
+L A VL + + + + LL + + D+++S PE++
Sbjct: 70 CHRLNADVLGQLIKKYYSFDNSLKNELLELIDMPQNGD---DSSTSITNGNGNTIFPEVD 126
Query: 119 IYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDL 178
+Y LL+ + L ++Y IARL++ +RRT+D +AA+LYFYY L +E
Sbjct: 127 MYLQLLLSMTLYYNEKYEVGAEYIKKVIARLQSYDRRTLDQIAAKLYFYYILFFEKCNRS 186
Query: 179 AEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQ 238
E R LL++HR A+LRHD Q DQA++L SK SN
Sbjct: 187 VECRNTLLSVHRTASLRHDSETQAMVLTLLLRNYIQFNLYDQADRLVSKTSFLTNASNNL 246
Query: 239 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAP--VAALGFRVQCNKWAIIVRLLLGEIP 296
RY +YLG+IR IQL+YT A E L+ A RKAP V A+ F K I+V+LL+GEIP
Sbjct: 247 AIRYQYYLGRIRAIQLDYTTAHEHLVSAIRKAPNTVYAVQFLEAVYKLHIVVQLLMGEIP 306
Query: 297 ERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVI 356
ER +F QK +EK L PY ++ AVRIGDL F K+ + F D LI RLRH VI
Sbjct: 307 ERRIFRQKSLEKTLVPYLRISQAVRIGDLCAFTDALSKYEAEFRFDGLYTLICRLRHTVI 366
Query: 357 RTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVS 416
+TGLR IS+SYSRISL DV KL LDS AE IV+K IRDG IDA++DH+N +M S
Sbjct: 367 KTGLRMISLSYSRISLRDVCIKLGLDSEE---SAEYIVAKGIRDGVIDASIDHSNAFMAS 423
Query: 417 KETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSH 457
E DIYST +PQ AF+ RI FCL +HN++++++R+P ++H
Sbjct: 424 NEAMDIYSTEQPQQAFHERIQFCLALHNDSIKSMRYPMDAH 464
>UNIPROTKB|I3LL55 [details] [associations]
symbol:I3LL55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR013586
Pfam:PF08375 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 Ensembl:ENSSSCT00000026850 OMA:XAMRFPP
Uniprot:I3LL55
Length = 505
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 184/474 (38%), Positives = 265/474 (55%)
Query: 3 QDVEMKDKENPS--------NSLSSP---FT-----PSTLHHLKEIASLMETGAHAREVR 46
QDVEMK++ + S N +P FT P +KE +E +E R
Sbjct: 34 QDVEMKEEADTSFNMKVYIINVTQAPYAEFTKVTNPPVASADIKEHVKQLEKAVSGKEPR 93
Query: 47 RIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEHEMEVDTASSGA 106
++RA+R+ + R+L VL ++ S LL +L + + E ++
Sbjct: 94 FVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNSATRDFLLPFLEEPMDTEADLQFRPRTG 153
Query: 107 PAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYF 166
A + LPE+E Y LLV+IFL++ KRY EA+ S + ++ NRR +D++AA+ Y+
Sbjct: 154 KAASAPLLPEVEAYLQLLVVIFLMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYY 213
Query: 167 YYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRS 226
Y++ YE L +R L A R ATLRHD GQ T DQAEKL S
Sbjct: 214 YHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYNLYDQAEKLVS 273
Query: 227 KAPRFEAHSNQQFCRYLFYL--GKIRTIQLEYTDAKESLLQAARKAPV-AALGFRVQCNK 283
K+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A+GF+ +K
Sbjct: 274 KSVFPEQANNNEWARYLYYTDPGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHK 333
Query: 284 WAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDR 343
I+V LLLGEIP ++++L PYF LT AVR G+L F V ++F F +D
Sbjct: 334 LLIVVELLLGEIPX-------SLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADG 386
Query: 344 TNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAI 403
T LI+RLRHNVI+TG+R I + R S + K L V D + AIRDG I
Sbjct: 387 TYTLIIRLRHNVIKTGVRMIRLCRERQSCSGARK---LPEGESVRDPQ-----AIRDGVI 438
Query: 404 DATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSH 457
+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP S+
Sbjct: 439 EASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPPKSY 492
>UNIPROTKB|G4NDR0 [details] [associations]
symbol:MGG_00884 "26S proteasome non-ATPase regulatory
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 GO:GO:0030234 EMBL:CM001235
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 KO:K03033
RefSeq:XP_003718082.1 EnsemblFungi:MGG_00884T0 GeneID:2674538
KEGG:mgr:MGG_00884 Uniprot:G4NDR0
Length = 557
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 171/415 (41%), Positives = 236/415 (56%)
Query: 89 LPKEDEHEMEVD------TASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACS 142
L ++ EME+D + +S + +K +PE++I+ +L +FL D K+ S
Sbjct: 138 LGRQSGSEMEIDGEVKGQSKTSSSKKESKEIIPEIDIFMGILTQVFLYDSKQLERGAEFS 197
Query: 143 SASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDL--------AEIRGNLLALHRIATL 194
R+ ++NRRT+D L+A++YFYYSL +E L IR LLA R A L
Sbjct: 198 QHLCERIHSLNRRTLDSLSAKVYFYYSLFFEKLAPLPPSPQSPSVSIRPTLLAALRTAVL 257
Query: 195 RHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQL 254
R D Q + +QA+ L S E +N Q RYL+YLG+IR IQL
Sbjct: 258 RKDIDTQASVIVLLLRNYLATSHINQADLLVSHTQFPENAANNQVARYLYYLGRIRAIQL 317
Query: 255 EYTDAKESLLQAARKAPVA--ALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRP 312
YT+A E L A RKAP + A+GF K ++V LL+G+IP+R F Q +E+AL P
Sbjct: 318 RYTEAHEHLTAATRKAPSSNCAVGFSQTATKLLLVVELLMGDIPDRATFRQPTLEEALHP 377
Query: 313 YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISL 372
YF L AVR+G+L+ F++ + TF D T LI+RLR NVIRTG+R +S+SYSRISL
Sbjct: 378 YFLLVQAVRVGNLDNFETTIADHADTFRKDGTYTLILRLRQNVIRTGIRMMSLSYSRISL 437
Query: 373 ADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAF 432
D+ +L L S AE IV+KAIRDG I+AT+D +G+M SKE GD+Y+T EP AF
Sbjct: 438 RDICIRLHLGSEE---SAEYIVAKAIRDGVIEATLDREHGYMRSKEVGDVYATREPGEAF 494
Query: 433 NSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDE 487
+ RI CL +H+E+V+A+RFP N H +AK I + D DE
Sbjct: 495 HDRIRACLALHDESVKAMRFPMNQHRLELKNAQEARERERE--MAKEIQDGDLDE 547
Score = 179 (68.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 51/189 (26%), Positives = 96/189 (50%)
Query: 3 QDVEMKDKENPSNSLSSPFTPST--LHHLKEIASLMETGAHAREVRRIMRAVRLTMALRR 60
+DV+M D+ + P+ + +K +L++ + R +RA+R ++R+
Sbjct: 41 EDVDM-DESGKVDDAEVKVDPAVQAVADIKSNFALLDKAVALFDARFTLRALRSISSIRK 99
Query: 61 KLKAPVLSAFLNFALAP---GSEAHSRLLSYLPKEDEH-------EMEVD------TASS 104
+L A +L+ + P +A +LL+ + K+D EME+D + +S
Sbjct: 100 RLTADILAQAIAETFPPTAASGDAVKQLLASIGKQDVQLGRQSGSEMEIDGEVKGQSKTS 159
Query: 105 GAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARL 164
+ +K +PE++I+ +L +FL D K+ S R+ ++NRRT+D L+A++
Sbjct: 160 SSKKESKEIIPEIDIFMGILTQVFLYDSKQLERGAEFSQHLCERIHSLNRRTLDSLSAKV 219
Query: 165 YFYYSLCYE 173
YFYYSL +E
Sbjct: 220 YFYYSLFFE 228
>GENEDB_PFALCIPARUM|MAL13P1.190 [details] [associations]
symbol:MAL13P1.190 "proteasome regulatory
component, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0004175 GO:GO:0006511 GO:GO:0042176
EMBL:AL844509 InterPro:IPR013143 SMART:SM00753 GO:GO:0005838
HOGENOM:HOG000193909 KO:K03033 OMA:NQSVKAM RefSeq:XP_001350108.1
ProteinModelPortal:Q8IDV2 EnsemblProtists:MAL13P1.190:mRNA
GeneID:813745 KEGG:pfa:MAL13P1.190 EuPathDB:PlasmoDB:PF3D7_1338100
ProtClustDB:CLSZ2733770 Uniprot:Q8IDV2
Length = 503
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 158/458 (34%), Positives = 258/458 (56%)
Query: 3 QDVEMKDKENPSNSLSSPFTPSTLHHLKEI--ASLMETGAHAREVRRIMRAVRLTMALRR 60
+DVE+K+ E + F + L + I A + + H + + ++ +RL++ +
Sbjct: 13 KDVEIKEIEKDDGD-NKVFVNNLLTSVNYINNAIVHKDNRHMLRMLKYIKNIRLSIKNDK 71
Query: 61 KLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH-EMEVDTASSGAPAPAKHPLPELEI 119
+ P++ + ++ L Y+ +E E+ + + LPELE+
Sbjct: 72 NMSMPIIIYLIKRIFKENYPIYNILNKYMNIYEEGLYKEISDFYNINEKTYMNCLPELEV 131
Query: 120 YCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLA 179
+ YLL+L++L+D+K Y+E S+ I R+ +NRR++D + A++YFYYS +EL G L+
Sbjct: 132 FFYLLILLYLLDEKCYDEGMELSTIIINRINKINRRSLDYINAKVYFYYSWIHELGGKLS 191
Query: 180 EIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFE-AHSNQQ 238
++R LL ++R A L D + Q D A + SK E SN Q
Sbjct: 192 QVRQKLLFIYRNACLHRDIMTQTVVVNLILRDYIKHNLYDLAVRFISKTSFPENLSSNAQ 251
Query: 239 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV---AALGFRVQCNKWAIIVRLLLGEI 295
+ RYL+Y+GKI +QL+Y++A + QA RKAP +A GF++ K I+V LL+G+I
Sbjct: 252 YARYLYYIGKILAVQLDYSEAHRKITQALRKAPQHTQSAKGFKLAATKMEIVVELLMGDI 311
Query: 296 PERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNV 355
P+R++F K M K L PY + +AVR GD+ F V ++ F D LI R+ HNV
Sbjct: 312 PDRSIFSNKIMYKKLIPYKHVVSAVRNGDINKFAQVMNNYTDLFIHDGVYLLIKRIHHNV 371
Query: 356 IRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMV 415
I+T LR I++SYSRIS+ D+ KK+ ++S+ D I +KAI DG I+ T+D+ N ++
Sbjct: 372 IKTALRIINLSYSRISINDIGKKIGIESS---LDVVGITAKAIHDGVIEGTIDYENQYVE 428
Query: 416 SKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFP 453
SK DIY T +P F+ RIAFCL ++++A++A+++P
Sbjct: 429 SKSNSDIYITGDPMKTFHKRIAFCLQLYSDAIKAMQYP 466
>UNIPROTKB|Q8IDV2 [details] [associations]
symbol:MAL13P1.190 "Proteasome regulatory component,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0004175 GO:GO:0006511 GO:GO:0042176 EMBL:AL844509
InterPro:IPR013143 SMART:SM00753 GO:GO:0005838 HOGENOM:HOG000193909
KO:K03033 OMA:NQSVKAM RefSeq:XP_001350108.1
ProteinModelPortal:Q8IDV2 EnsemblProtists:MAL13P1.190:mRNA
GeneID:813745 KEGG:pfa:MAL13P1.190 EuPathDB:PlasmoDB:PF3D7_1338100
ProtClustDB:CLSZ2733770 Uniprot:Q8IDV2
Length = 503
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 158/458 (34%), Positives = 258/458 (56%)
Query: 3 QDVEMKDKENPSNSLSSPFTPSTLHHLKEI--ASLMETGAHAREVRRIMRAVRLTMALRR 60
+DVE+K+ E + F + L + I A + + H + + ++ +RL++ +
Sbjct: 13 KDVEIKEIEKDDGD-NKVFVNNLLTSVNYINNAIVHKDNRHMLRMLKYIKNIRLSIKNDK 71
Query: 61 KLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH-EMEVDTASSGAPAPAKHPLPELEI 119
+ P++ + ++ L Y+ +E E+ + + LPELE+
Sbjct: 72 NMSMPIIIYLIKRIFKENYPIYNILNKYMNIYEEGLYKEISDFYNINEKTYMNCLPELEV 131
Query: 120 YCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLA 179
+ YLL+L++L+D+K Y+E S+ I R+ +NRR++D + A++YFYYS +EL G L+
Sbjct: 132 FFYLLILLYLLDEKCYDEGMELSTIIINRINKINRRSLDYINAKVYFYYSWIHELGGKLS 191
Query: 180 EIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFE-AHSNQQ 238
++R LL ++R A L D + Q D A + SK E SN Q
Sbjct: 192 QVRQKLLFIYRNACLHRDIMTQTVVVNLILRDYIKHNLYDLAVRFISKTSFPENLSSNAQ 251
Query: 239 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV---AALGFRVQCNKWAIIVRLLLGEI 295
+ RYL+Y+GKI +QL+Y++A + QA RKAP +A GF++ K I+V LL+G+I
Sbjct: 252 YARYLYYIGKILAVQLDYSEAHRKITQALRKAPQHTQSAKGFKLAATKMEIVVELLMGDI 311
Query: 296 PERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNV 355
P+R++F K M K L PY + +AVR GD+ F V ++ F D LI R+ HNV
Sbjct: 312 PDRSIFSNKIMYKKLIPYKHVVSAVRNGDINKFAQVMNNYTDLFIHDGVYLLIKRIHHNV 371
Query: 356 IRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMV 415
I+T LR I++SYSRIS+ D+ KK+ ++S+ D I +KAI DG I+ T+D+ N ++
Sbjct: 372 IKTALRIINLSYSRISINDIGKKIGIESS---LDVVGITAKAIHDGVIEGTIDYENQYVE 428
Query: 416 SKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFP 453
SK DIY T +P F+ RIAFCL ++++A++A+++P
Sbjct: 429 SKSNSDIYITGDPMKTFHKRIAFCLQLYSDAIKAMQYP 466
>CGD|CAL0001433 [details] [associations]
symbol:RPN3 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 CGD:CAL0001433 GO:GO:0030234 EMBL:AACQ01000017
EMBL:AACQ01000015 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 eggNOG:NOG251646 KO:K03033 RefSeq:XP_721281.1
RefSeq:XP_721552.1 ProteinModelPortal:Q5AHZ8 STRING:Q5AHZ8
GeneID:3636917 GeneID:3637147 KEGG:cal:CaO19.10572
KEGG:cal:CaO19.3054 Uniprot:Q5AHZ8
Length = 481
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 176/492 (35%), Positives = 257/492 (52%)
Query: 2 TQDVEMKDKENPSNSLSSPFTPSTLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRK 61
++D++MKD + + +SS + + +++ L+ A + R + + R LRRK
Sbjct: 4 SKDIKMKDVQQ--DDVSSEID-TLVKEIEQSFILLSKVATTFDNRYVSKVFRDLGPLRRK 60
Query: 62 LKA---PVLSAFLNFALAPGSEAHSRLLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELE 118
L VL+ +N + + LL YL +E + +PE+E
Sbjct: 61 LVRNGNSVLATVINNTYPQTHNSKTYLLKYL-----NESPTSVGNDAMDVDNTTLIPEIE 115
Query: 119 IYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDL 178
+Y +LLV ++L+D + E + + +K+ NRR++D + A+++FY EL GDL
Sbjct: 116 LYIHLLVQVYLLDTGKLEELNSLGEHVVQLMKSFNRRSLDFIQAKVWFYVCRAKELIGDL 175
Query: 179 AEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQ 238
IR L R ATLRHD + QA L K E N
Sbjct: 176 YSIRPELSYSLRTATLRHDIETTASVITLLLRNYLLTHDISQASDLVEKVEFPENAGNAL 235
Query: 239 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAAL--GFRVQCNKWAIIVRLLLGEIP 296
RY +YL +I IQL+Y+ A E ++ A RKAP +L GF K +I++ LL+G+IP
Sbjct: 236 VARYYYYLARINAIQLDYSTANECVITAIRKAPQTSLANGFVQAATKLSIVIELLMGDIP 295
Query: 297 ERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVI 356
E VF K L PYF +T AVR+GD++LF V KF + F D L+ RLR NVI
Sbjct: 296 ELKVFKNKSGN--LEPYFNVTKAVRLGDIKLFGEVLHKFEADFKKDDNFTLVSRLRQNVI 353
Query: 357 RTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVS 416
+TG+R IS+SYS+ISL D+ KL LDS E IVSKAIRDG I+A+++H G+M S
Sbjct: 354 KTGIRIISLSYSKISLKDICIKLHLDSEE---STEYIVSKAIRDGVIEASINHQKGYMQS 410
Query: 417 KETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXL 476
KE D+YST PQ F+ RI FCL++HNE+V+++R+P ++ L
Sbjct: 411 KELLDVYSTKLPQAEFDQRIKFCLSLHNESVKSMRYPNDNEKENTNKEIEPSEEVE---L 467
Query: 477 AKHIAEEDDDEF 488
K I E D D+F
Sbjct: 468 LKAIEEGDLDDF 479
>WB|WBGene00004460 [details] [associations]
symbol:rpn-3 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0006915 GO:GO:0030234 GO:GO:0002119 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646
HOGENOM:HOG000193909 KO:K03033 GeneTree:ENSGT00490000043406
OMA:NQSVKAM EMBL:FO080722 PIR:S44783 RefSeq:NP_498869.1
ProteinModelPortal:Q04908 DIP:DIP-25350N IntAct:Q04908
MINT:MINT-211615 STRING:Q04908 PaxDb:Q04908
EnsemblMetazoa:C30C11.2.1 EnsemblMetazoa:C30C11.2.2 GeneID:176196
KEGG:cel:CELE_C30C11.2 UCSC:C30C11.2 CTD:176196 WormBase:C30C11.2
InParanoid:Q04908 NextBio:891536 Uniprot:Q04908
Length = 504
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 173/498 (34%), Positives = 263/498 (52%)
Query: 4 DVEMKDKENPSNSLSSPFTPSTLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLK 63
+V+ ++ P+ + + ++KE + ++ G E I R +++ R+++
Sbjct: 14 EVDEAKQDVPATEPAKDLNAIAVENIKEQLAALDKG----EEHLITRVLQVLPKTRKQIN 69
Query: 64 APVLSAFLNFALAPGSEAHSRLLSYL---PKEDEHEMEVDTASSGAPAPAK--HPL---P 115
VL ++ L+ ++ +L YL P D +DT++ +P K P+ P
Sbjct: 70 DNVLYKLVSSHLSSDAQFAEGMLKYLHYTPAADTEVQPMDTSNVKTKSPKKGVKPVFASP 129
Query: 116 ELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELT 175
E + Y LLVL+ L +K+ EA A + + N +RRT+D LAA+ ++ + YE
Sbjct: 130 ESDCYLRLLVLLHLYAQKKNTEALALGENQLTSIYNFDRRTLDGLAAKTLYFLCVIYERE 189
Query: 176 GDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHS 235
G L + +G L + R ATLR+ Q A L SK + S
Sbjct: 190 GRLFDHQGFLNSRLRTATLRNFSESQAVLICWLLRCYLINRQYQSAAHLVSKVAFPDNAS 249
Query: 236 NQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AALGFRVQCNKWAIIVRLLLGE 294
N RY++Y G+I+ +QL+Y A LQA RKAP A+GF+ KW +++ LL GE
Sbjct: 250 NNDLARYMYYQGRIKALQLDYNSAAGYFLQAQRKAPQEGAIGFKQAVQKWVVVIGLLQGE 309
Query: 295 IPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHN 354
IP+R+VF Q K L Y +L+ VR GD+ F E+F + F +D T LIVRLR N
Sbjct: 310 IPDRSVFRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQFKTQFEADDTLTLIVRLRQN 369
Query: 355 VIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV--DHANG 412
VI+T ++ IS++YSRI + D+AKKL + + + E IV+KAI DGAIDA + D +G
Sbjct: 370 VIKTAIKQISLAYSRIYIKDIAKKLYITNET---ETEYIVAKAIADGAIDAVITSDVRDG 426
Query: 413 --WMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXX 470
+M S ET DIY T+EPQ F++RI +CL +HN+AV+ALR+PP
Sbjct: 427 PRYMQSSETADIYRTSEPQAHFDTRIRYCLELHNQAVKALRYPPKKKIAVETIEQARERE 486
Query: 471 XXXXXLAKHIAEEDDDEF 488
AK +A+EDDD+F
Sbjct: 487 QQELEFAKELADEDDDDF 504
>UNIPROTKB|Q04908 [details] [associations]
symbol:rpn-3 "26S proteasome non-ATPase regulatory subunit
3" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000717 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0006915 GO:GO:0030234 GO:GO:0002119
GO:GO:0000003 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:FO080722 PIR:S44783
RefSeq:NP_498869.1 ProteinModelPortal:Q04908 DIP:DIP-25350N
IntAct:Q04908 MINT:MINT-211615 STRING:Q04908 PaxDb:Q04908
EnsemblMetazoa:C30C11.2.1 EnsemblMetazoa:C30C11.2.2 GeneID:176196
KEGG:cel:CELE_C30C11.2 UCSC:C30C11.2 CTD:176196 WormBase:C30C11.2
InParanoid:Q04908 NextBio:891536 Uniprot:Q04908
Length = 504
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 173/498 (34%), Positives = 263/498 (52%)
Query: 4 DVEMKDKENPSNSLSSPFTPSTLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLK 63
+V+ ++ P+ + + ++KE + ++ G E I R +++ R+++
Sbjct: 14 EVDEAKQDVPATEPAKDLNAIAVENIKEQLAALDKG----EEHLITRVLQVLPKTRKQIN 69
Query: 64 APVLSAFLNFALAPGSEAHSRLLSYL---PKEDEHEMEVDTASSGAPAPAK--HPL---P 115
VL ++ L+ ++ +L YL P D +DT++ +P K P+ P
Sbjct: 70 DNVLYKLVSSHLSSDAQFAEGMLKYLHYTPAADTEVQPMDTSNVKTKSPKKGVKPVFASP 129
Query: 116 ELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELT 175
E + Y LLVL+ L +K+ EA A + + N +RRT+D LAA+ ++ + YE
Sbjct: 130 ESDCYLRLLVLLHLYAQKKNTEALALGENQLTSIYNFDRRTLDGLAAKTLYFLCVIYERE 189
Query: 176 GDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHS 235
G L + +G L + R ATLR+ Q A L SK + S
Sbjct: 190 GRLFDHQGFLNSRLRTATLRNFSESQAVLICWLLRCYLINRQYQSAAHLVSKVAFPDNAS 249
Query: 236 NQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AALGFRVQCNKWAIIVRLLLGE 294
N RY++Y G+I+ +QL+Y A LQA RKAP A+GF+ KW +++ LL GE
Sbjct: 250 NNDLARYMYYQGRIKALQLDYNSAAGYFLQAQRKAPQEGAIGFKQAVQKWVVVIGLLQGE 309
Query: 295 IPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHN 354
IP+R+VF Q K L Y +L+ VR GD+ F E+F + F +D T LIVRLR N
Sbjct: 310 IPDRSVFRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQFKTQFEADDTLTLIVRLRQN 369
Query: 355 VIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV--DHANG 412
VI+T ++ IS++YSRI + D+AKKL + + + E IV+KAI DGAIDA + D +G
Sbjct: 370 VIKTAIKQISLAYSRIYIKDIAKKLYITNET---ETEYIVAKAIADGAIDAVITSDVRDG 426
Query: 413 --WMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXX 470
+M S ET DIY T+EPQ F++RI +CL +HN+AV+ALR+PP
Sbjct: 427 PRYMQSSETADIYRTSEPQAHFDTRIRYCLELHNQAVKALRYPPKKKIAVETIEQARERE 486
Query: 471 XXXXXLAKHIAEEDDDEF 488
AK +A+EDDD+F
Sbjct: 487 QQELEFAKELADEDDDDF 504
>UNIPROTKB|H9L061 [details] [associations]
symbol:H9L061 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR013586 Pfam:PF08375 GO:GO:0030234
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 GeneTree:ENSGT00490000043406 OMA:NQSVKAM
EMBL:AADN02050853 EMBL:AADN02050851 EMBL:AADN02050852
Ensembl:ENSGALT00000021992 Uniprot:H9L061
Length = 512
Score = 478 (173.3 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 116/322 (36%), Positives = 173/322 (53%)
Query: 4 DVEMKDKEN--PSNSLSSPFTPS-----TLHHLKEIASLMETGAHAREVRRIMRAVRLTM 56
DVEM+++ P+ P TL +KE +E +E R ++RA+R
Sbjct: 27 DVEMQEETAAVPAGEAGGERQPRELDAITLEDIKEHVKQLEKAVAGKEPRYVLRALRALP 86
Query: 57 ALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEHEMEVDTASSGAPAPAKHPLPE 116
+ R+L A VL +N LL +L + + E E+ A + LPE
Sbjct: 87 STSRRLNANVLHKAVNGFFTSNGAVRDFLLGFLEEPMDTEAELQFRPRMGKAASAPLLPE 146
Query: 117 LEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYELTG 176
+E Y LL++I+L++ KRY EA+ S + ++ + NRR +D++ A+ Y+Y+S YE
Sbjct: 147 VEAYLQLLLVIYLMNSKRYPEAQKVSDDLMQKISSQNRRALDLVVAKCYYYHSRIYEFLN 206
Query: 177 DLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSN 236
L +R L A R ATLRHD GQ T DQAEKL SK+ E +N
Sbjct: 207 KLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYNLYDQAEKLVSKSVFPEQANN 266
Query: 237 QQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AALGFRVQCNKWAIIVRLLLGEI 295
++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A+GF+ +K I+V LLLGEI
Sbjct: 267 NEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEI 326
Query: 296 PERTVFMQKGMEKALRPYFELT 317
P+R F Q ++++L PYF LT
Sbjct: 327 PDRLQFRQPSLKRSLMPYFLLT 348
Score = 231 (86.4 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 46/95 (48%), Positives = 63/95 (66%)
Query: 395 SKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPP 454
S+AIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP
Sbjct: 417 SQAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPP 476
Query: 455 NSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 488
S+ AK +AE+DDD F
Sbjct: 477 KSYNKDLESAEERREREQQDLEFAKEMAEDDDDGF 511
>UNIPROTKB|H9L164 [details] [associations]
symbol:H9L164 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA]
InterPro:IPR013586 Pfam:PF08375 GO:GO:0030234 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 EMBL:AADN02050853 EMBL:AADN02050851
EMBL:AADN02050852 Ensembl:ENSGALT00000029758 Uniprot:H9L164
Length = 457
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 166/466 (35%), Positives = 247/466 (53%)
Query: 25 TLHHLKEIASLMETGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSR 84
TL +KE +E +E R ++RA+R + R+L A VL +N
Sbjct: 7 TLEDIKEHVKQLEKAVAGKEPRYVLRALRALPSTSRRLNANVLHKAVNGFFTSNGAVRDF 66
Query: 85 LLSYLPKEDEHEMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSA 144
LL +L + + E E+ A + LPE+E Y LL++I+L++ KRY EA+ S
Sbjct: 67 LLGFLEEPMDTEAELQFRPRMGKAASAPLLPEVEAYLQLLLVIYLMNSKRYPEAQKVSDD 126
Query: 145 SIARLKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETX 204
+ ++ + NRR +D++ A+ Y+Y+S YE L +R L A R ATLRHD GQ T
Sbjct: 127 LMQKISSQNRRALDLVVAKCYYYHSRIYEFLNKLDVVRSFLHARLRTATLRHDADGQATL 186
Query: 205 XXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLL 264
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++
Sbjct: 187 LNLLLRNYLHYNLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMT 246
Query: 265 QAARKAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIG 323
A RKAP A+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT G
Sbjct: 247 NALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQ----G 302
Query: 324 DLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDS 383
+ L + + + + R I H+ + L + S++ + D
Sbjct: 303 TVLLRVLLPQSLGTECPTSRAPTPISV--HS-LSPPLP--APSFALNCCLHPGRWWCPDH 357
Query: 384 ANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMH 443
A P S+AIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++H
Sbjct: 358 A-PRG------SQAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIH 410
Query: 444 NEAVRALRFPPNSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 488
N +V+A+RFPP S+ AK +AE+DDD F
Sbjct: 411 NMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDGF 456
>SGD|S000000823 [details] [associations]
symbol:RPN3 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IDA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
SGD:S000000823 GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 EMBL:BK006939 GO:GO:0008541 GO:GO:0006511 EMBL:U18778
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 PDB:4B4T PDBsum:4B4T
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 OMA:LKHDNET
GeneTree:ENSGT00490000043406 OrthoDB:EOG4350FR EMBL:D78023
PIR:S50479 RefSeq:NP_010938.1 ProteinModelPortal:P40016
DIP:DIP-1322N IntAct:P40016 MINT:MINT-401279 STRING:P40016
PaxDb:P40016 PeptideAtlas:P40016 EnsemblFungi:YER021W GeneID:856742
KEGG:sce:YER021W NextBio:982876 Genevestigator:P40016
GermOnline:YER021W Uniprot:P40016
Length = 523
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 128/354 (36%), Positives = 196/354 (55%)
Query: 116 ELEIYCYLLVLIFLIDKKRYNEAKACSSASIAR--LKNMNRRTVDVLAARLYFYYSLCYE 173
E+ + +LLV +FL D K + + + L N R+++++ A+L+FY L +E
Sbjct: 133 EINCFMHLLVQLFLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHE 192
Query: 174 LTGDLAE----------IRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEK 223
+E +R ++ +IA+L+HD + D A
Sbjct: 193 TLARSSEEINSDNQNIILRSTMMKFLKIASLKHDNETKAMLINLILRDFLNNGEVDSASD 252
Query: 224 LRSKA--PRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAP--VAALGFRV 279
SK P + S+ + RY FYL KI IQL+Y+ A E ++ A RKAP +LGF
Sbjct: 253 FISKLEYPHTDVSSSLE-ARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQ 311
Query: 280 QCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTF 339
Q NK ++LL+G+IPE + F Q M+K+L PY+ LT AV++GDL+ F S K+
Sbjct: 312 QSNKLHCCIQLLMGDIPELSFFHQSNMQKSLLPYYHLTKAVKLGDLKKFTSTITKYKQLL 371
Query: 340 SSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIR 399
D T L VRLR NVI+TG+R IS++Y +ISL D+ KL LDS V E +VS+AIR
Sbjct: 372 LKDDTYQLCVRLRSNVIKTGIRIISLTYKKISLRDICLKLNLDSEQTV---EYMVSRAIR 428
Query: 400 DGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFP 453
DG I+A ++H +G++ + E +IY + +PQ F+ RI F +H+E + ++R+P
Sbjct: 429 DGVIEAKINHEDGFIETTELLNIYDSEDPQQVFDERIKFANQLHDEYLVSMRYP 482
>FB|FBgn0027055 [details] [associations]
symbol:CSN3 "COP9 complex homolog subunit 3" species:7227
"Drosophila melanogaster" [GO:0008180 "signalosome"
evidence=ISS;NAS] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0007275 GO:GO:0005737
GO:GO:0007095 GO:GO:0050821 EMBL:AE014296 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0046331 GO:GO:0008180
CTD:1448 GO:GO:0000338 GO:GO:0019781 eggNOG:NOG249849 KO:K12177
OMA:DRALYFF GeneTree:ENSGT00490000043408 EMBL:AF129081
EMBL:AY071575 RefSeq:NP_524190.2 UniGene:Dm.5855
ProteinModelPortal:Q8SYG2 IntAct:Q8SYG2 MINT:MINT-278777
STRING:Q8SYG2 PaxDb:Q8SYG2 EnsemblMetazoa:FBtr0078269 GeneID:40308
KEGG:dme:Dmel_CG18332 FlyBase:FBgn0027055 InParanoid:Q8SYG2
OrthoDB:EOG4JQ2CW PhylomeDB:Q8SYG2 GenomeRNAi:40308 NextBio:818125
Bgee:Q8SYG2 GermOnline:CG18332 Uniprot:Q8SYG2
Length = 445
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 47/200 (23%), Positives = 95/200 (47%)
Query: 239 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALG-FRVQCNKWAIIVRLLL-GEI- 295
F Y +Y G I T Y A + P A+ ++ K ++V L++ G+I
Sbjct: 198 FLLYFYYGGMIYTAVKNYERALY-FFEVCITTPAMAMSHIMLEAYKKFLMVSLIVEGKIA 256
Query: 296 --PERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRH 353
P+ T + + M+ Y +L N E + + K+S F+ D L ++
Sbjct: 257 YIPKNTQVIGRFMKPMANHYHDLVNVYANSSSEELRIIILKYSEAFTRDNNMGLAKQVAT 316
Query: 354 NVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGW 413
++ + ++ ++ ++ +SL+DVA +++L SA +AE + I+ G I A+++ +G
Sbjct: 317 SLYKRNIQRLTKTFLTLSLSDVASRVQLASA---VEAERYILNMIKSGEIYASINQKDGM 373
Query: 414 MVSKETGDIYSTNEPQLAFN 433
++ K+ + Y N P++ N
Sbjct: 374 VLFKDDPEKY--NSPEMFLN 391
>DICTYBASE|DDB_G0291848 [details] [associations]
symbol:csn3 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0291848 GO:GO:0005737 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008180 eggNOG:NOG249849
KO:K12177 OMA:DRALYFF EMBL:DQ309431 EMBL:AAFI02000185
RefSeq:XP_629934.1 ProteinModelPortal:Q54E53 STRING:Q54E53
EnsemblProtists:DDB0233101 GeneID:8628339 KEGG:ddi:DDB_G0291848
ProtClustDB:CLSZ2497092 Uniprot:Q54E53
Length = 418
Score = 143 (55.4 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 49/189 (25%), Positives = 89/189 (47%)
Query: 242 YLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALG-FRVQCNKWAIIVRLL-LGEI---P 296
Y +Y G I T +Y A E+ + AP +AL V+ K +IV L+ G + P
Sbjct: 176 YFYYSGIIFTAFKKYKKAIEAF-KFVITAPASALSAITVEAYKKYLIVYLIQFGSVQHFP 234
Query: 297 ERT-VFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNV 355
+ T +Q+ ++ +PY E + G++ + A + F D L+ +
Sbjct: 235 KCTPAVVQRNIKSHCKPYTEFVQSFSNGNINDIMNKASSGAEFFQKDSNWGLVKLSIKST 294
Query: 356 IRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMV 415
R ++ ++ ++ +S+ D+A+K+ L P A AE V K I +G I AT++ +G +
Sbjct: 295 YRRNIKKLTQTFMTLSINDIAEKVSL----PKAKAEQFVLKMIEEGEIFATINQKDGMVT 350
Query: 416 SKETGDIYS 424
E + +S
Sbjct: 351 FDECFEDFS 359
>UNIPROTKB|E2RD70 [details] [associations]
symbol:COPS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 EMBL:AAEX03003732 RefSeq:XP_864801.2
ProteinModelPortal:E2RD70 Ensembl:ENSCAFT00000029331 GeneID:479528
KEGG:cfa:479528 NextBio:20854700 Uniprot:E2RD70
Length = 423
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 50/225 (22%), Positives = 105/225 (46%)
Query: 233 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 291
A+ + F Y +Y G I T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 292 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 347
LG++ + + + + + ++P Y EL + +++ K S TF+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGL 294
Query: 348 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 407
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 408 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 450
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>UNIPROTKB|Q9UNS2 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9606 "Homo sapiens" [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008180 "signalosome" evidence=IDA] [GO:0010388
"cullin deneddylation" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0007165 GO:GO:0001701
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009416 EMBL:CH471196
GO:GO:0008180 CleanEx:HS_CSN3 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF CTD:8533
HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AF031647 EMBL:AF098109
EMBL:AK312476 EMBL:AK302304 EMBL:AK316400 EMBL:AC055811
EMBL:BC001891 IPI:IPI00025721 RefSeq:NP_001186054.1
RefSeq:NP_003644.2 UniGene:Hs.6076 ProteinModelPortal:Q9UNS2
DIP:DIP-32478N IntAct:Q9UNS2 MINT:MINT-129190 STRING:Q9UNS2
PhosphoSite:Q9UNS2 DMDM:55976621 PaxDb:Q9UNS2 PeptideAtlas:Q9UNS2
PRIDE:Q9UNS2 DNASU:8533 Ensembl:ENST00000268717
Ensembl:ENST00000539941 GeneID:8533 KEGG:hsa:8533 UCSC:uc002grd.3
GeneCards:GC17M017151 HGNC:HGNC:2239 HPA:HPA021997 MIM:604665
neXtProt:NX_Q9UNS2 PharmGKB:PA26755 InParanoid:Q9UNS2
PhylomeDB:Q9UNS2 ChiTaRS:COPS3 GenomeRNAi:8533 NextBio:31960
ArrayExpress:Q9UNS2 Bgee:Q9UNS2 CleanEx:HS_COPS3
Genevestigator:Q9UNS2 GermOnline:ENSG00000141030 Uniprot:Q9UNS2
Length = 423
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 50/225 (22%), Positives = 105/225 (46%)
Query: 233 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 291
A+ + F Y +Y G I T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 292 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 347
LG++ + + + + + ++P Y EL + +++ K S TF+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGL 294
Query: 348 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 407
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 408 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 450
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>MGI|MGI:1349409 [details] [associations]
symbol:Cops3 "COP9 (constitutive photomorphogenic) homolog,
subunit 3 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO;IDA] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1349409 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 CleanEx:MM_CSN3 GO:GO:0010388
eggNOG:NOG249849 HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF
CTD:8533 HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AF071313
EMBL:BC068179 IPI:IPI00131870 RefSeq:NP_036121.1 UniGene:Mm.40
ProteinModelPortal:O88543 IntAct:O88543 STRING:O88543
PhosphoSite:O88543 PaxDb:O88543 PRIDE:O88543
Ensembl:ENSMUST00000019517 GeneID:26572 KEGG:mmu:26572
InParanoid:O88543 NextBio:304659 Bgee:O88543 Genevestigator:O88543
GermOnline:ENSMUSG00000019373 Uniprot:O88543
Length = 423
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 50/225 (22%), Positives = 105/225 (46%)
Query: 233 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 291
A+ + F Y +Y G I T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 292 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 347
LG++ + + + + + ++P Y EL + +++ K S TF+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVSKHSETFTRDNNMGL 294
Query: 348 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 407
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 408 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 450
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>RGD|1303002 [details] [associations]
symbol:Cops3 "COP9 signalosome subunit 3" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008180 "signalosome"
evidence=IEA;ISO] [GO:0010388 "cullin deneddylation"
evidence=IEA;ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
RGD:1303002 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ
EMBL:BC079143 IPI:IPI00200828 RefSeq:NP_001004200.1 UniGene:Rn.3963
ProteinModelPortal:Q68FW9 STRING:Q68FW9 PhosphoSite:Q68FW9
PRIDE:Q68FW9 Ensembl:ENSRNOT00000004438 GeneID:287367
KEGG:rno:287367 UCSC:RGD:1303002 InParanoid:Q68FW9 NextBio:625967
Genevestigator:Q68FW9 Uniprot:Q68FW9
Length = 423
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 50/225 (22%), Positives = 105/225 (46%)
Query: 233 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 291
A+ + F Y +Y G I T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 292 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 347
LG++ + + + + + ++P Y EL + +++ K S TF+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGL 294
Query: 348 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 407
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 408 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 450
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>UNIPROTKB|Q5ZJF1 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9031 "Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849 HOGENOM:HOG000030451
KO:K12177 OMA:DRALYFF CTD:8533 GeneTree:ENSGT00490000043408
HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AJ720483 IPI:IPI00599251
RefSeq:NP_001006163.1 UniGene:Gga.31710 ProteinModelPortal:Q5ZJF1
STRING:Q5ZJF1 PRIDE:Q5ZJF1 Ensembl:ENSGALT00000007721 GeneID:416504
KEGG:gga:416504 InParanoid:Q5ZJF1 NextBio:20819948 Uniprot:Q5ZJF1
Length = 423
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/225 (22%), Positives = 104/225 (46%)
Query: 233 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 291
A+ + F Y +Y G I T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 292 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 347
LG++ + + + + + ++P Y EL +++ K S TF+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNKPSELRNLVNKHSETFTRDNNMGL 294
Query: 348 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 407
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 408 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 450
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVCFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>UNIPROTKB|A6H7B5 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF EMBL:BC146183
IPI:IPI00695994 RefSeq:NP_001092374.1 UniGene:Bt.3232
ProteinModelPortal:A6H7B5 STRING:A6H7B5 PRIDE:A6H7B5
Ensembl:ENSBTAT00000025255 GeneID:507932 KEGG:bta:507932 CTD:8533
GeneTree:ENSGT00490000043408 HOVERGEN:HBG051135 InParanoid:A6H7B5
OrthoDB:EOG49KFQJ NextBio:20868278 Uniprot:A6H7B5
Length = 423
Score = 138 (53.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 49/225 (21%), Positives = 104/225 (46%)
Query: 233 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 291
A+ + F Y +Y G + T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMVYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 292 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 347
LG++ + + + + + ++P Y EL + +S+ K S F+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRSLVTKHSEIFTRDNNMGL 294
Query: 348 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 407
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 408 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 450
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>ZFIN|ZDB-GENE-030131-7660 [details] [associations]
symbol:cops3 "COP9 constitutive photomorphogenic
homolog subunit 3" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 ZFIN:ZDB-GENE-030131-7660 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008180
HOGENOM:HOG000030451 KO:K12177 CTD:8533 HOVERGEN:HBG051135
EMBL:BC045415 EMBL:BC064288 IPI:IPI00484908 RefSeq:NP_955979.1
UniGene:Dr.120979 ProteinModelPortal:Q6P2U9 PRIDE:Q6P2U9
GeneID:335720 KEGG:dre:335720 InParanoid:Q6P2U9 NextBio:20810996
Bgee:Q6P2U9 Uniprot:Q6P2U9
Length = 423
Score = 137 (53.3 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 47/225 (20%), Positives = 105/225 (46%)
Query: 233 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRLLL 292
A+ + F Y +Y G I T + A QA +A ++ K I+V L+L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFFEQAITTPAMAVSHIMLEAYKKYILVSLIL 234
Query: 293 -GEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 347
G++ + + + + + ++P Y EL + +++ K S TF+ D L
Sbjct: 235 HGKVQQLPKYTSQIVGRFIKPLSNAYHELAQIYATNNPAELRALVNKHSETFTRDNNTGL 294
Query: 348 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 407
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIYASI 351
Query: 408 DHANGWMVSKETGDIYSTNEPQLA--FNSRIAFCLNMHNEAVRAL 450
+ +G + + + Y N P + + + C+ + +E ++++
Sbjct: 352 NQKDGMVCFHDNPEKY--NNPAMLHKIDQEMLKCIEL-DEKLKSM 393
>UNIPROTKB|F1SB16 [details] [associations]
symbol:COPS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 EMBL:CU927962 RefSeq:NP_001231078.1
UniGene:Ssc.11099 Ensembl:ENSSSCT00000019646 GeneID:100512312
KEGG:ssc:100512312 Uniprot:F1SB16
Length = 423
Score = 135 (52.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 46/223 (20%), Positives = 102/223 (45%)
Query: 233 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 291
A+ + F Y +Y G + T + A QA +A ++ K I+V L L
Sbjct: 175 AYDARHFLCYYYYGGMVYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 292 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 347
LG++ + + + + + ++P Y EL +++ K S TF D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNSPSELRTLVNKHSETFVRDSNMGL 294
Query: 348 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 407
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 408 DHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRAL 450
+ +G + + + Y+ + + + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKYNNPAMLQSIDQEMLKCIEL-DERLKAM 393
>TAIR|locus:2145638 [details] [associations]
symbol:COP13 "AT5G14250" species:3702 "Arabidopsis
thaliana" [GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010388 "cullin deneddylation"
evidence=RCA;IMP] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0016571 "histone methylation"
evidence=RCA] [GO:0016579 "protein deubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051604
"protein maturation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0007275 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000085 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009585 EMBL:AL163817 GO:GO:0008180
GO:GO:0010388 EMBL:AF361759 EMBL:AF361760 EMBL:AF395059
EMBL:AF419585 EMBL:AY113041 EMBL:AY084910 IPI:IPI00524958
PIR:T48598 RefSeq:NP_568296.1 UniGene:At.5163
ProteinModelPortal:Q8W575 SMR:Q8W575 IntAct:Q8W575 STRING:Q8W575
PaxDb:Q8W575 PRIDE:Q8W575 DNASU:831275 EnsemblPlants:AT5G14250.1
GeneID:831275 KEGG:ath:AT5G14250 TAIR:At5g14250 eggNOG:NOG249849
HOGENOM:HOG000030451 InParanoid:Q8W575 KO:K12177 OMA:DRALYFF
PhylomeDB:Q8W575 ProtClustDB:CLSN2689667 Genevestigator:Q8W575
Uniprot:Q8W575
Length = 429
Score = 119 (46.9 bits), Expect = 0.00042, P = 0.00042
Identities = 47/203 (23%), Positives = 92/203 (45%)
Query: 232 EAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALG-FRVQCNKWAIIVRL 290
E + F Y +Y G I I L+ LL AP+ + ++ K I+V L
Sbjct: 173 EIDQPRDFFLYSYYGGMI-CIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSL 231
Query: 291 LL-GE----IPE-RTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRT 344
+ G+ +P+ + Q+ + PY EL N G + +++ ++ F D+
Sbjct: 232 IHNGQFTNTLPKCASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKN 291
Query: 345 NNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAID 404
L+ + ++ + + ++ Y +SL D+A ++L +A +AE V + I+DG I
Sbjct: 292 LGLVKQAVSSLYKRNILRLTQKYLTLSLQDIANMVQLGNAK---EAEMHVLQMIQDGQIH 348
Query: 405 ATVDHANGWMVSKETGDIYSTNE 427
A ++ +G + E + Y ++E
Sbjct: 349 ALINQKDGMVRFLEDPEQYKSSE 371
>DICTYBASE|DDB_G0284241 [details] [associations]
symbol:DDB_G0284241 "proteasome component region PCI
(PINT) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000717 Pfam:PF01399 dictyBase:DDB_G0284241
GenomeReviews:CM000153_GR EMBL:AAFI02000064 eggNOG:COG5600
InterPro:IPR013143 SMART:SM00753 OMA:YAFRNCP RefSeq:XP_638668.1
PRIDE:Q54PX7 EnsemblProtists:DDB0305019 GeneID:8624497
KEGG:ddi:DDB_G0284241 ProtClustDB:CLSZ2497181 Uniprot:Q54PX7
Length = 430
Score = 116 (45.9 bits), Expect = 0.00091, P = 0.00091
Identities = 43/194 (22%), Positives = 89/194 (45%)
Query: 229 PRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIV 288
P E++ Q Y F+ G++ +Y A+E LL A K P ++ NK I++
Sbjct: 232 PTLESYPLNQVITYRFFNGRLSVFNGQYKKAQEELLYAFNKCPNDSIK-----NKRLILL 286
Query: 289 RLLLGEIPERTVFMQKGM-EK-ALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNN 346
L+ ++ E+ F +K + EK L + ++ +++ G+++ F + F S
Sbjct: 287 FLVPMQL-EQCKFPKKSLLEKFKLTQFIDIVQSIKSGNIKQFNECLSTHQNFFISKGIYL 345
Query: 347 LIVRLRHNVIRTGLRNISI--SYSRISLADVAKKLRL--DSANPVADAESIVSKAIRDGA 402
++ +L+ V R + + + + RI + + L+ + A + + E I+S I +G
Sbjct: 346 ILEKLKIIVYRNLFKKVHLITTGQRIPIGNFVSALKWMENDAIDIDETECILSNLIYNGY 405
Query: 403 IDATVDHANGWMVS 416
+ + H +VS
Sbjct: 406 LKGYISHKVALVVS 419
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 488 455 0.00094 118 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 605 (64 KB)
Total size of DFA: 248 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.97u 0.14s 34.11t Elapsed: 00:00:02
Total cpu time: 33.98u 0.14s 34.12t Elapsed: 00:00:02
Start: Fri May 10 04:45:58 2013 End: Fri May 10 04:46:00 2013