Citrus Sinensis ID: 011353
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 488 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.993 | 0.995 | 0.769 | 0.0 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.913 | 0.871 | 0.637 | 1e-172 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.944 | 0.991 | 0.446 | 1e-116 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.633 | 0.753 | 0.319 | 1e-38 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.567 | 0.712 | 0.320 | 4e-37 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.567 | 0.672 | 0.327 | 2e-36 | |
| Q9SFT7 | 414 | Serine/threonine-protein | no | no | 0.569 | 0.671 | 0.347 | 3e-36 | |
| O48814 | 395 | Serine/threonine-protein | no | no | 0.600 | 0.741 | 0.314 | 4e-35 | |
| P43298 | 942 | Probable receptor protein | no | no | 0.565 | 0.292 | 0.319 | 8e-35 | |
| Q8GXZ3 | 410 | Serine/threonine-protein | no | no | 0.549 | 0.653 | 0.333 | 2e-34 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/485 (76%), Positives = 428/485 (88%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGCE SKLSA C SE G + P+ ++ E + +++P F E+SIET+R ATSGFA EN
Sbjct: 1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct: 61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC E +ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ L DS LEGQFSSD+GTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV+A++ LQKD E+ SH L+G+P+ A LSPLG+ACLR DLTAIHEI+EKLGY
Sbjct: 301 PNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTTALSPLGEACLRSDLTAIHEIIEKLGY 360
Query: 361 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 420
KDDEGA TELSFQMWT QMQ+TL KKKGD AFRHKDF +IECY+QFI+VGTM SPT
Sbjct: 361 KDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVH 420
Query: 421 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 480
AR+SL YLM+DMP+EALN+A QAQVISP WH+A+YLQA AL ALG+ENEA AL++ ++L
Sbjct: 421 ARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAML 480
Query: 481 ENKKS 485
E+K++
Sbjct: 481 ESKRN 485
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 606 bits (1563), Expect = e-172, Method: Compositional matrix adjust.
Identities = 288/452 (63%), Positives = 355/452 (78%), Gaps = 6/452 (1%)
Query: 38 VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA 97
+P F E+S L+ AT+ F+ +NIVSE GEKAPN+VYKG+L+N+ IAVK+F + AWP+
Sbjct: 55 IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114
Query: 98 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
+QF EEA VG+LR+ RLANL+G CC+GDERLLVAE+MPNDTLAKHLFHWE Q ++WAMR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174
Query: 158 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217
LRV +IAEAL+YC+++ R LYHDLNAYR++FD+D +PRLSCFGLMKNSRDG+SYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234
Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277
+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +NI L DS LEG+F
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKF 294
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA---- 333
S++E T +V LAS+CLQYEPRERPN + LV L LQ ++VPS+V++GI A
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTP 354
Query: 334 -LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVA 392
PLSPLG+AC RMDLTAIH+IL Y+DDEG ELSFQ WT QM++ L+++K+GD +
Sbjct: 355 QRPLSPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDARKRGDQS 413
Query: 393 FRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM 452
FR KDF+ +I+CY+QFIDVGTMVSPT F RRSL YL+ D P AL DA QAQ + P W
Sbjct: 414 FREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPT 473
Query: 453 AAYLQAAALFALGKENEAQAALREASILENKK 484
A Y+Q+ AL L +A L EA+ LE K+
Sbjct: 474 AFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 315/488 (64%), Gaps = 27/488 (5%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGC C LS S D +E + G P ++S L+TAT+ F+ EN
Sbjct: 1 MGC-CYSLS-----STVDPVQDHTTDASSEPRNGGGEDPPLTKFSFSALKTATNHFSPEN 54
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVS+ + +VV+KG+L+N +A+KRFN AW D + FLEEA+ VG+LR++RL NL+G
Sbjct: 55 IVSD---QTSDVVFKGRLQNGGFVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIG 111
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC+GD+R LVA++M NDTLAK LF + Q M W++RLRVA +AEAL+YC + A Y+
Sbjct: 112 YCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYN 171
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
+L+AY+++FD+D + LSCFGLMK + + + TG V PE+V+Y FGT
Sbjct: 172 NLSAYKVLFDEDGDACLSCFGLMKEINNDQ-------------ITTGSVNPENVIYRFGT 218
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+L++LLSGK IPPSHA ++I +N+ L D L+G+FS DE + +LAS+CL+YE +E
Sbjct: 219 VLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFSIDEANVVYKLASQCLKYEGQES 278
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPH----GAAALPLSPLGDACLRMDLTAIHEILE 356
PN + +V L TLQ TE PS+ ++ + + +++ LSPLG+ACLRMDL +IH IL
Sbjct: 279 PNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSSNLSPLGEACLRMDLASIHSILV 338
Query: 357 KLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS 416
GY DD+ ELSF+ W +++E + ++ GD AF +DF+ +I CY+QF++ ++V
Sbjct: 339 LAGYDDDKD-IIELSFEEWIQEVKELQDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVY 397
Query: 417 PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALRE 476
P+ +ARRSLSYL D P++AL D AQ + P W A YLQ+ AL L ++ L+E
Sbjct: 398 PSVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKE 457
Query: 477 ASILENKK 484
A++LE KK
Sbjct: 458 AALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 168/347 (48%), Gaps = 38/347 (10%)
Query: 3 CECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN----VPVFCEYSIETLRTATSGFAM 58
E S S + G +A V P + P +S L++AT F
Sbjct: 11 AESSGASTKYDAKDIGSLGSKASSVSVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRP 70
Query: 59 ENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKRFNRSAWPDARQFLEEARAVG 108
++++ GE V+KG ++ + IAVK+ N+ W +++L E +G
Sbjct: 71 DSVL---GEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLG 127
Query: 109 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAE 166
Q +R L L+G C E + RLLV E+MP +L HLF QP+ W +RL+VAL A+
Sbjct: 128 QFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAK 187
Query: 167 ALEYCTSKE-RALYHDLNAYRIVFDDDVNPRLSCFGLMKNS--RDGRSYSTNL----AFT 219
L + S E R +Y D I+ D + N +LS FGL K+ D ST + +
Sbjct: 188 GLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYA 247
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHALD--------LIRDRNIQT 267
PEYL TG +T +S +YSFG +LL+LLSG+ PS + L+ R I
Sbjct: 248 APEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFR 307
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314
+ D+ L+ Q+S +E ++ L+ RCL E + RPN +V+ L +Q
Sbjct: 308 VIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQ 354
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 35/312 (11%)
Query: 44 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLE----------NQFRIAVKRFNRSA 93
+S L+ AT F +++V GE V++G L+ + IAVKR N
Sbjct: 49 FSFNELKLATRNFRSDSVV---GEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDG 105
Query: 94 WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF---HWETQ 150
+ R++L E +GQL + L L+G C E ++RLLV E+M +L HLF + + +
Sbjct: 106 FQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFK 165
Query: 151 PMKWAMRLRVALHIAEALEYCTSKE-RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209
P+ W +R++VAL A+ L + S + +Y D+ A I+ D D N +LS FGL ++ G
Sbjct: 166 PLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMG 225
Query: 210 -RSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDL 259
+SY + + PEY+ TG + S +YSFG +LL+LL G+ H P+ +L
Sbjct: 226 EQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNL 285
Query: 260 I--------RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311
+ R + + D+ L Q+ + L +A +CL +EP+ RP +V ALV
Sbjct: 286 VDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALV 345
Query: 312 TLQKDTEVPSHV 323
LQ P++V
Sbjct: 346 QLQDSVVKPANV 357
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 34/311 (10%)
Query: 39 PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKR 88
P ++ L+ AT F ++++ E G + V+KG ++ Q IAVK+
Sbjct: 52 PNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVKK 108
Query: 89 FNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 148
N+ W +++L E +GQ + L L+G C E + RLLV E+MP +L HLF
Sbjct: 109 LNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 168
Query: 149 T--QPMKWAMRLRVALHIAEALEYCTSKERA-LYHDLNAYRIVFDDDVNPRLSCFGLMKN 205
+ QP+ W +RL+VAL A+ L + + E + +Y D I+ D + N +LS FGL K+
Sbjct: 169 SYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKD 228
Query: 206 --SRDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPS 254
+ D ST + + PEYL TG +T +S +YS+G +LL++LSG K+ PP
Sbjct: 229 GPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPG 288
Query: 255 H------ALDLIRD-RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307
A L+ + R + + D+ L+ Q+S +E ++ LA RCL +E + RPN +V
Sbjct: 289 EQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348
Query: 308 TALVTLQKDTE 318
+ L +Q E
Sbjct: 349 SHLEHIQTLNE 359
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 156/314 (49%), Gaps = 36/314 (11%)
Query: 25 QDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRI 84
Q+ N+E V N +S L TAT F E ++ GE VYKGKLE I
Sbjct: 48 QNKNNDEDKEVTNNIAAQTFSFRELATATKNFRQECLI---GEGGFGRVYKGKLEKTGMI 104
Query: 85 -AVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
AVK+ +R+ ++F+ E + L ++ L NL+G C +GD+RLLV EYM +L H
Sbjct: 105 VAVKQLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGDQRLLVYEYMSRGSLEDH 164
Query: 144 LFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSC 199
L + P+ W R+R+AL A LEY K +Y DL A I+ D + N +LS
Sbjct: 165 LLDLTPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYRDLKAANILLDGEFNAKLSD 224
Query: 200 FGLMKNS--RDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
FGL K D + S+ + + PEY RTG++T +S +YSFG +LL+L++G+ +
Sbjct: 225 FGLAKLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRV-- 282
Query: 254 SHALDLIRDRNIQTLT-----------------DSCLEGQFSSDEGTELVRLASRCLQYE 296
+D R ++ Q L D LEG F + V +A+ CLQ E
Sbjct: 283 ---IDTTRPKDEQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKALNQAVAVAAMCLQEE 339
Query: 297 PRERPNPRSLVTAL 310
RP +VTAL
Sbjct: 340 ATVRPLMSDVVTAL 353
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 163/331 (49%), Gaps = 38/331 (11%)
Query: 24 AQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ-- 81
AQ E E + + PV ++ L+ AT F ++++ GE V+KG L+
Sbjct: 39 AQKTEGEI---LSSTPV-KSFTFNELKLATRNFRPDSVI---GEGGFGCVFKGWLDESTL 91
Query: 82 --------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133
IAVK+ N+ + R++L E +GQL + L L+G C E + RLLV E
Sbjct: 92 TPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYE 151
Query: 134 YMPNDTLAKHLFHWET--QPMKWAMRLRVALHIAEALEYCTSKE-RALYHDLNAYRIVFD 190
+M +L HLF +P+ W +R+ VAL A+ L + S + +Y D+ A I+ D
Sbjct: 152 FMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLD 211
Query: 191 DDVNPRLSCFGLMKNSRDGR-SYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
D N +LS FGL ++ G SY + + PEY+ +G + S +YSFG LLL+
Sbjct: 212 ADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLE 271
Query: 245 LLSGK----HIPPSHALDLI--------RDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292
+LSGK H P+ +L+ R + + D+ L+ Q+ +E + +A +C
Sbjct: 272 ILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQC 331
Query: 293 LQYEPRERPNPRSLVTALVTLQKDTEVPSHV 323
L +EP+ RP +V AL LQ + PS
Sbjct: 332 LSFEPKSRPTMDQVVRALQQLQDNLGKPSQT 362
|
Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P43298|TMK1_ARATH Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 169/316 (53%), Gaps = 40/316 (12%)
Query: 45 SIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS--AWPDARQFLE 102
SI+ LR+ T+ F+ +NI+ G VVYKG+L + +IAVKR A +F
Sbjct: 577 SIQVLRSVTNNFSSDNIL---GSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKS 633
Query: 103 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLR 159
E + ++R+R L LLG C +G+E+LLV EYMP TL++HLF W +P+ W RL
Sbjct: 634 EIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLT 693
Query: 160 VALHIAEALEYC--TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYSTNL 216
+AL +A +EY + + ++ DL I+ DD+ +++ FGL++ + +G+ S T +
Sbjct: 694 LALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRI 753
Query: 217 AFT----PPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLI-------- 260
A T PEY TGRVT + +YSFG +L++L++G+ P ++ L+
Sbjct: 754 AGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSWFKRMYI 813
Query: 261 -RDRNIQTLTDSCLEGQFSSDEGT-----ELVRLASRCLQYEPRERPN---PRSLVTALV 311
++ + + D+ ++ DE T + LA C EP +RP+ +++++LV
Sbjct: 814 NKEASFKKAIDTTID----LDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNILSSLV 869
Query: 312 TLQKDTEVPSHVLMGI 327
L K ++ + GI
Sbjct: 870 ELWKPSDQNPEDIYGI 885
|
Probable receptor. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 29/297 (9%)
Query: 44 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRI-------AVKRFNRSAWPD 96
+++ L T T F + I+ E G VYKG +++ R+ AVK N+
Sbjct: 57 FTLFELETITKSFRPDYILGEGGF---GTVYKGYIDDNLRVGLKSLPVAVKVLNKEGLQG 113
Query: 97 ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAM 156
R++L E +GQLR+ L L+G CCE D RLLV E+M +L HLF T P+ W+
Sbjct: 114 HREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMLRGSLENHLFRKTTAPLSWSR 173
Query: 157 RLRVALHIAEALEYCTSKER-ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
R+ +AL A+ L + + ER +Y D I+ D D +LS FGL K G S
Sbjct: 174 RMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 233
Query: 214 TNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLI----- 260
T + + PEY+ TG +T S +YSFG +LL++L+G+ PS +L+
Sbjct: 234 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEMLTGRKSVDKTRPSKEQNLVDWARP 293
Query: 261 ---RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314
R + + D LE Q+S + LA CL P+ RP +V L LQ
Sbjct: 294 KLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ 350
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 488 | ||||||
| 225426412 | 488 | PREDICTED: probable serine/threonine-pro | 1.0 | 1.0 | 0.840 | 0.0 | |
| 224058519 | 488 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.827 | 0.0 | |
| 224071868 | 487 | predicted protein [Populus trichocarpa] | 0.997 | 1.0 | 0.831 | 0.0 | |
| 225454188 | 491 | PREDICTED: probable serine/threonine-pro | 0.993 | 0.987 | 0.820 | 0.0 | |
| 449452322 | 486 | PREDICTED: probable serine/threonine-pro | 0.991 | 0.995 | 0.825 | 0.0 | |
| 357520451 | 495 | Protein kinase-like protein [Medicago tr | 0.997 | 0.983 | 0.797 | 0.0 | |
| 356513393 | 489 | PREDICTED: probable serine/threonine-pro | 0.995 | 0.993 | 0.793 | 0.0 | |
| 356528280 | 489 | PREDICTED: probable serine/threonine-pro | 0.995 | 0.993 | 0.787 | 0.0 | |
| 224127648 | 491 | predicted protein [Populus trichocarpa] | 1.0 | 0.993 | 0.776 | 0.0 | |
| 449457578 | 486 | PREDICTED: probable serine/threonine-pro | 0.993 | 0.997 | 0.806 | 0.0 |
| >gi|225426412|ref|XP_002270065.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297742525|emb|CBI34674.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/488 (84%), Positives = 440/488 (90%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGC+CSK CC SE E VENEE D++P F EY+I+ LR ATSGFA EN
Sbjct: 1 MGCQCSKFWVCCWDSEQKGLVVEPPSVENEENSEADDLPAFHEYTIDQLRMATSGFAAEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ RIAVKRFN+SAWPDARQFLEEAR+VGQLRN RLANLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNKSAWPDARQFLEEARSVGQLRNHRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC EGDERLLVAE+MPNDTLAKHLFHWETQPMKWAMRLRVAL++A+ALEYCTSK RALYH
Sbjct: 121 CCSEGDERLLVAEFMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRIVFDDD +PRLSCFG+MKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYSFGT
Sbjct: 181 DLNAYRIVFDDDGDPRLSCFGMMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ LTDSCLEGQFSSD+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSSDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV AL+ LQK+TEVPSHVLMG+P A LPLSPLG+ACLRMDLTAIHEILEKLGY
Sbjct: 301 PNPKSLVAALIPLQKETEVPSHVLMGMPQSGATLPLSPLGEACLRMDLTAIHEILEKLGY 360
Query: 361 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 420
KDDEGA TELSFQMWT QMQETLNSKKKGDVAFRHKDFRA+IECYTQFIDVGTMVSPT F
Sbjct: 361 KDDEGATTELSFQMWTNQMQETLNSKKKGDVAFRHKDFRAAIECYTQFIDVGTMVSPTVF 420
Query: 421 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 480
ARRSL YLMSDMPQEALNDA QAQVISP+WH+A+YLQA AL ALG+ENE++ L+E S+L
Sbjct: 421 ARRSLCYLMSDMPQEALNDAVQAQVISPIWHIASYLQAVALSALGRENESEVTLKEGSVL 480
Query: 481 ENKKSANA 488
E KK+ A
Sbjct: 481 EEKKNKTA 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224058519|ref|XP_002299534.1| predicted protein [Populus trichocarpa] gi|222846792|gb|EEE84339.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/488 (82%), Positives = 445/488 (91%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGCECSKL+ CC S+Y + PE + + EE+ +D++P F EY+IETLR ATSGF++EN
Sbjct: 1 MGCECSKLTKCCWSSDYNGSVPEDHNEDKEERSELDDLPAFREYNIETLRMATSGFSVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ RI VKRFNRS+WPDARQFLEEAR VGQLRN RLANLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIVVKRFNRSSWPDARQFLEEARTVGQLRNHRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCCEGDERLLV+E+MPNDTLAKHLFHWETQPMKWAMRLRVALH+A+ALEYC SK RALYH
Sbjct: 121 CCCEGDERLLVSEFMPNDTLAKHLFHWETQPMKWAMRLRVALHLAQALEYCASKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR+VFDD+ NPRLSCFGLMKNS DG+SYSTNLAFTPPEYLRTGRVT ESV+YSFGT
Sbjct: 181 DLNAYRVVFDDEGNPRLSCFGLMKNSIDGKSYSTNLAFTPPEYLRTGRVTAESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ L+DSCLEGQF++D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLSDSCLEGQFANDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV AL+ LQKDTEVPSH LMGI GAAALPLSPLG+ACLRMDLTAIHEILEKLGY
Sbjct: 301 PNPKSLVAALIPLQKDTEVPSHELMGIQDGAAALPLSPLGEACLRMDLTAIHEILEKLGY 360
Query: 361 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 420
KDDEGAATELSFQMWT QMQE LNSKKKGDVAFRHKDFRA+ E Y+QFI++GTMVSPT
Sbjct: 361 KDDEGAATELSFQMWTNQMQEILNSKKKGDVAFRHKDFRAATEFYSQFINIGTMVSPTVH 420
Query: 421 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 480
ARRSLSYL+SDMPQEALNDA QAQ I P+WH+A+YLQAAAL +GKENEA+AAL+EAS L
Sbjct: 421 ARRSLSYLLSDMPQEALNDALQAQAIFPIWHIASYLQAAALLTMGKENEAKAALKEASTL 480
Query: 481 ENKKSANA 488
ENK++ NA
Sbjct: 481 ENKRNTNA 488
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224071868|ref|XP_002303586.1| predicted protein [Populus trichocarpa] gi|222841018|gb|EEE78565.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/488 (83%), Positives = 443/488 (90%), Gaps = 1/488 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGCECSKLS CC S+Y + PE ++ NEEK +D++P F EY+IETLR ATSGF++EN
Sbjct: 1 MGCECSKLSKCCWSSDYNGSVPEDRNEVNEEKSELDDLPAFREYNIETLRMATSGFSVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ R+AVKRFNRSAWPDARQFLEEARAVGQLRN RLANLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRVAVKRFNRSAWPDARQFLEEARAVGQLRNHRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC EGDERLLVAE+MPNDTLAKHLFHWET+PMKWAMRLRVALH+A+ALEYCTSK RALYH
Sbjct: 121 CCGEGDERLLVAEFMPNDTLAKHLFHWETKPMKWAMRLRVALHLAQALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRIVFDD+ NPRLSCFGLMKN RDG+SYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct: 181 DLNAYRIVFDDEGNPRLSCFGLMKNRRDGKSYSTNLAFTPPEYLRTGRVIPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ LTDSCLEGQF++D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFTNDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PN +SLV AL+ LQKDTEVPSH LMGI GAAALPLSPLG+ACLRMDLTAIHEILEKLGY
Sbjct: 301 PNSKSLVAALIPLQKDTEVPSHELMGIQDGAAALPLSPLGEACLRMDLTAIHEILEKLGY 360
Query: 361 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 420
KDDEG ATELSFQMWT Q QETLN+ KKGDVAF+HKDF A+ E Y+QFIDVG MVSPT
Sbjct: 361 KDDEGTATELSFQMWTNQKQETLNT-KKGDVAFQHKDFIAATELYSQFIDVGNMVSPTVH 419
Query: 421 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 480
ARRSLSYLM+++PQEALNDA QAQ ISP+WH+A+YLQA ALF LG+ENEAQAAL+E S L
Sbjct: 420 ARRSLSYLMTNLPQEALNDALQAQAISPIWHIASYLQAVALFVLGRENEAQAALKEGSTL 479
Query: 481 ENKKSANA 488
ENK+S NA
Sbjct: 480 ENKRSTNA 487
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454188|ref|XP_002272416.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297745267|emb|CBI40347.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/485 (82%), Positives = 436/485 (89%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGC+CSKL+ CC S++ + EA DV+N EK VD +PVFCEY+ E L+ ATSGFA+EN
Sbjct: 1 MGCQCSKLAPCCWDSQFKGSVLEAPDVDNGEKSEVDYLPVFCEYTFEQLKNATSGFAVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPDARQF EEARAVGQLRN RLANLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRVAWPDARQFSEEARAVGQLRNHRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCCE +ERLLVAEYMPN+TLAKHLFHWETQPMKWAMRLRV LH+A+ALEYCT + RALYH
Sbjct: 121 CCCEDNERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTGRGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRI+FD+D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRILFDEDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRN+Q LTDSCLEGQF++D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTNDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV AL LQK+TEVPSHVLMGIPH A+ PLSPLG+AC RMDLTAIHEILE +GY
Sbjct: 301 PNPKSLVAALTPLQKETEVPSHVLMGIPHSASFSPLSPLGEACSRMDLTAIHEILESVGY 360
Query: 361 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 420
KDDEG ELSFQMWT QMQETLNSKKKGD AFR KDFRA+I+CYTQFIDVGTMVSPT
Sbjct: 361 KDDEGMTNELSFQMWTDQMQETLNSKKKGDAAFRQKDFRAAIDCYTQFIDVGTMVSPTVC 420
Query: 421 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 480
ARRSL YLMSDMPQEALNDA QAQVISPVWH+A+YLQAAAL LG ENEAQAAL++ + L
Sbjct: 421 ARRSLCYLMSDMPQEALNDAMQAQVISPVWHIASYLQAAALTGLGMENEAQAALKDGTTL 480
Query: 481 ENKKS 485
E +++
Sbjct: 481 EAQRN 485
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452322|ref|XP_004143908.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] gi|449495800|ref|XP_004159948.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/486 (82%), Positives = 439/486 (90%), Gaps = 2/486 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGCECSK S C GSE + D E+ K D +P F E++I+ LRTATSGFA+EN
Sbjct: 1 MGCECSKFSDCF-GSEETKPVARVPDNESIGKSEFD-LPAFREFTIDQLRTATSGFAVEN 58
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKL+NQ RIAVKRFNRSAWPDARQFL+EARAVGQLRN+RLANLLG
Sbjct: 59 IVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRSAWPDARQFLDEARAVGQLRNQRLANLLG 118
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC EG+ERLLVAE+MPN+TLAKHLFHWE QPMKW+MRLRVALH+A+ALEYCTSK RALYH
Sbjct: 119 CCFEGEERLLVAEFMPNETLAKHLFHWENQPMKWSMRLRVALHLAQALEYCTSKGRALYH 178
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRIVFDD+ NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG +TPESV+YSFGT
Sbjct: 179 DLNAYRIVFDDEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGGITPESVIYSFGT 238
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ LTDSCLEGQFS+DEGTELVRLASRCLQYEPRER
Sbjct: 239 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSNDEGTELVRLASRCLQYEPRER 298
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PN +SLVTAL+ LQKD EVPSHVLMGIP AAAL LSPLG+A LRMDLTAIHE+LE +GY
Sbjct: 299 PNTKSLVTALIPLQKDLEVPSHVLMGIPQDAAALNLSPLGEASLRMDLTAIHEVLEMIGY 358
Query: 361 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 420
KDDEGAATELSFQMWT QMQ+TL SKKKGDVAFR K+FR +IECYTQFIDVGTMVSPT F
Sbjct: 359 KDDEGAATELSFQMWTNQMQDTLTSKKKGDVAFRQKEFRTAIECYTQFIDVGTMVSPTVF 418
Query: 421 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 480
ARRSLSYL+S+MP+EALNDA QAQVISP+WH+A+YLQA+ALF LGKENEA ALRE S+L
Sbjct: 419 ARRSLSYLISNMPEEALNDAVQAQVISPLWHVASYLQASALFTLGKENEAHIALREGSVL 478
Query: 481 ENKKSA 486
E+KK+A
Sbjct: 479 ESKKNA 484
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357520451|ref|XP_003630514.1| Protein kinase-like protein [Medicago truncatula] gi|355524536|gb|AET04990.1| Protein kinase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/489 (79%), Positives = 434/489 (88%), Gaps = 2/489 (0%)
Query: 1 MGCECSKLSACCSGSEYGEA-APEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAM 58
MGC SK S CC +E G PEA ENE+ N + F EY+I+ LR ATSGFA+
Sbjct: 7 MGCNFSKYSTCCCSTEQGGVQVPEANIEENEDNNVEGNGLASFREYTIDQLRKATSGFAI 66
Query: 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL 118
ENIVSEHGEKAPNVVYKGKLENQ RIAVKRFN+S WPDA QFLEEARAVGQLR++RLANL
Sbjct: 67 ENIVSEHGEKAPNVVYKGKLENQVRIAVKRFNKSNWPDAHQFLEEARAVGQLRSQRLANL 126
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
LGCCCEGDERLLV+EYM NDTLAKHLFHWETQPMKWAMRLRVAL++A+ALEYCTSK RAL
Sbjct: 127 LGCCCEGDERLLVSEYMSNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRAL 186
Query: 179 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSF 238
YHDLNAYR++FDDD NP+LSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV YSF
Sbjct: 187 YHDLNAYRVLFDDDFNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSF 246
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
GTLLLDLLSGKHIPPSHALDLIRDRN+Q+LTDSCLEGQFS DEGTELVRLASRCLQ EPR
Sbjct: 247 GTLLLDLLSGKHIPPSHALDLIRDRNLQSLTDSCLEGQFSDDEGTELVRLASRCLQSEPR 306
Query: 299 ERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKL 358
ERPNP+SLVTAL+ LQKD+EVPSHVLMGIP G+AA PL+PLG+ACLRMDLT+IHE+LEK+
Sbjct: 307 ERPNPKSLVTALIPLQKDSEVPSHVLMGIPDGSAAFPLTPLGEACLRMDLTSIHEVLEKI 366
Query: 359 GYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT 418
GYKDDEGAATELSFQMWT QMQ+T++SKKKGD AFR KDF+ +IE YTQFI+VG+MVSPT
Sbjct: 367 GYKDDEGAATELSFQMWTNQMQQTIDSKKKGDSAFRVKDFKTAIEGYTQFIEVGSMVSPT 426
Query: 419 AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREAS 478
+ARRSLSYL+++MP EAL DA QAQ+ISPVW++A YLQA AL ALGKEN+AQ AL+E S
Sbjct: 427 IYARRSLSYLINNMPNEALGDAMQAQMISPVWYIAFYLQAVALLALGKENDAQVALKEGS 486
Query: 479 ILENKKSAN 487
LE K S N
Sbjct: 487 SLEAKNSTN 495
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513393|ref|XP_003525398.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/490 (79%), Positives = 436/490 (88%), Gaps = 4/490 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQ-DVENEEK--PGVDNVPVFCEYSIETLRTATSGFA 57
MGC SK +ACC+GSE A EAQ D NE+ GVD +P F E++I+ LR ATSGFA
Sbjct: 1 MGCGFSKYTACCTGSEQDGLAAEAQVDGGNEDNVVEGVD-LPWFHEFTIDQLRKATSGFA 59
Query: 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN 117
+ENIVSEHGEKAPNVVYKG+L+NQ RIAVKRFNR+AWP+A+ FLEEARAVGQLRN+RL N
Sbjct: 60 IENIVSEHGEKAPNVVYKGRLDNQMRIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLIN 119
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
LLGCCCEG+ERLLVAEYMPNDTL KHLFHWETQPM+WAMR+RVAL +A+ALEYCTSK RA
Sbjct: 120 LLGCCCEGEERLLVAEYMPNDTLTKHLFHWETQPMRWAMRMRVALCLAQALEYCTSKGRA 179
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYS 237
LYHDLNAYR+++DDD NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESV YS
Sbjct: 180 LYHDLNAYRVLYDDDYNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVTYS 239
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
FGTLLLDLLSGKHIPPSHALDLIRD+N+Q L+DSCLEG+ ++D+GTELVRLASRCLQ EP
Sbjct: 240 FGTLLLDLLSGKHIPPSHALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASRCLQSEP 299
Query: 298 RERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEK 357
RERPNP+SLV AL+ LQKD+EVPSHVLMGIP G AA PLSPLG+ACLRMDLTA+HE++EK
Sbjct: 300 RERPNPKSLVAALIPLQKDSEVPSHVLMGIPDGTAAFPLSPLGEACLRMDLTALHEVMEK 359
Query: 358 LGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP 417
+GYKDDEGAATELSFQMWT QMQETLNSKKKGD AFRHKDF+ +I+ YT FIDVGTMVSP
Sbjct: 360 IGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYTMFIDVGTMVSP 419
Query: 418 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 477
T + RRSL YLMS+MP EALNDA QAQVISPVW++A YLQA AL ALGKEN+AQ AL+E
Sbjct: 420 TVYVRRSLCYLMSNMPDEALNDAMQAQVISPVWYIAFYLQAVALLALGKENDAQVALKEG 479
Query: 478 SILENKKSAN 487
S LE KK+ N
Sbjct: 480 SSLETKKNTN 489
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528280|ref|XP_003532732.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/490 (78%), Positives = 436/490 (88%), Gaps = 4/490 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQ-DVENEEK--PGVDNVPVFCEYSIETLRTATSGFA 57
MGC+ SK + CC+G+E A EAQ D NE+ GVD +P F E++IE LR ATSGFA
Sbjct: 1 MGCDFSKYTVCCTGTEQDGPAAEAQVDGGNEDNVVEGVD-LPRFHEFTIEQLRRATSGFA 59
Query: 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN 117
+ENIVSEHGEKAPNVVYKGKL+NQ RIAVKRFNR+AWP+A+ FLEEARAVGQLRN+RL N
Sbjct: 60 IENIVSEHGEKAPNVVYKGKLDNQMRIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLIN 119
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
LLGCCCEG+ERLLVAEYMPNDTLAKHLFHWETQPM+WAMR+RVAL +A+ALEYCTSK RA
Sbjct: 120 LLGCCCEGEERLLVAEYMPNDTLAKHLFHWETQPMRWAMRMRVALCLAQALEYCTSKGRA 179
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYS 237
LYHDLNAYR+++DD+ NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV YS
Sbjct: 180 LYHDLNAYRVLYDDEYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYS 239
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
FGTLLLDLLSGKHIPPS ALDLIRD+N+Q L+DSCLEG+ ++D+GTELVRLASRCLQ EP
Sbjct: 240 FGTLLLDLLSGKHIPPSRALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASRCLQSEP 299
Query: 298 RERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEK 357
RERPNP+SLV AL+ LQKD+EVPS+VLMGIP G A PLSPLG+ACLRMDLTA+HE++EK
Sbjct: 300 RERPNPKSLVAALIPLQKDSEVPSNVLMGIPDGTAGFPLSPLGEACLRMDLTALHEVMEK 359
Query: 358 LGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP 417
+GYKDDEGAATELSFQMWT QMQETLNSKKKGD AFRHKDF+ +I+ YT FIDVGTMVSP
Sbjct: 360 IGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYTMFIDVGTMVSP 419
Query: 418 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 477
T +ARRSL YLMS+MP EALNDA QAQVISPVW++A YLQA AL ALGKEN+AQ L+E
Sbjct: 420 TIYARRSLCYLMSNMPDEALNDAMQAQVISPVWYIAFYLQAVALLALGKENDAQVPLKEG 479
Query: 478 SILENKKSAN 487
S LENKK+ N
Sbjct: 480 SSLENKKNTN 489
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127648|ref|XP_002320126.1| predicted protein [Populus trichocarpa] gi|222860899|gb|EEE98441.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/488 (77%), Positives = 429/488 (87%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MG +C+KL+ CC S++ A E V NEEK V+++P F E++ E L+ ATSGFA+EN
Sbjct: 1 MGSQCTKLTPCCLDSQFKAAVVEVPSVGNEEKSEVNDLPTFREFTFEQLKNATSGFAVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPDARQFLEEAR+VGQLRN RL NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDARQFLEEARSVGQLRNNRLVNLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCCEGDERLLVAE+MPN+TLAKHLFHWETQP+KWAMRLRV LH+AEALEYCTSK RALYH
Sbjct: 121 CCCEGDERLLVAEFMPNETLAKHLFHWETQPIKWAMRLRVVLHLAEALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRI+FD+D NP+LS FGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRILFDEDGNPKLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLD LSGKHIPPSHALDLIRDRN+Q LTDSCLEGQFS+D+GTELVRLASRCLQYE RER
Sbjct: 241 LLLDHLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDDGTELVRLASRCLQYELRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
P+ + LV AL LQK+T+V SH+LMGIPH A++ PLSP G+ACLR DLTAIHEIL+ +GY
Sbjct: 301 PSLKFLVAALTPLQKETDVASHILMGIPHSASSSPLSPFGEACLRKDLTAIHEILDNIGY 360
Query: 361 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 420
KDD+G A ELSFQMWT +MQETLN+KKKGD +F+ KDFR +IECYTQFIDVGTMVSPT F
Sbjct: 361 KDDQGVANELSFQMWTDEMQETLNTKKKGDASFKQKDFRVAIECYTQFIDVGTMVSPTVF 420
Query: 421 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 480
ARRSLSYLMSDMPQE L+DA QAQVISPVWH+A+YLQA AL LG ENEA AAL+E + +
Sbjct: 421 ARRSLSYLMSDMPQEGLSDAMQAQVISPVWHVASYLQAVALATLGMENEAHAALKEGTNI 480
Query: 481 ENKKSANA 488
E KK+ ++
Sbjct: 481 EAKKNQDS 488
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457578|ref|XP_004146525.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/486 (80%), Positives = 434/486 (89%), Gaps = 1/486 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGC CSKLS CC ++ + P+ QDVENE +D +P F EY+IE LR ATSGFA+EN
Sbjct: 1 MGCGCSKLSGCCWTLDHNKPVPDLQDVENEGSSDLD-IPAFREYTIEQLRIATSGFAVEN 59
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ RIAVKRF+RSAWPDARQFLEEA+ VG LRN RLANLLG
Sbjct: 60 IVSEHGEKAPNVVYKGKLENQKRIAVKRFDRSAWPDARQFLEEAKNVGLLRNLRLANLLG 119
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCCEGDERLL+AEYMPN+TLAKHLFHW++QP+KW MRLRVAL+IA+ALEYCTSK RALYH
Sbjct: 120 CCCEGDERLLIAEYMPNETLAKHLFHWDSQPLKWIMRLRVALYIAQALEYCTSKGRALYH 179
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR+VFDDD NPRLSCFG+MKNSRDG+SYSTNLAF PPEYL+TGRVTPESVMYSFGT
Sbjct: 180 DLNAYRVVFDDDGNPRLSCFGMMKNSRDGKSYSTNLAFCPPEYLKTGRVTPESVMYSFGT 239
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRN+Q LTDSCLEGQFS+DEGTELVRLASRCLQYEPRER
Sbjct: 240 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQYEPRER 299
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV++L LQ DTEVPSHVL+GIP A+ LPL+PLG+ACLRMDLT IHEILEK+ Y
Sbjct: 300 PNPKSLVSSLTPLQTDTEVPSHVLLGIPRDASDLPLTPLGEACLRMDLTVIHEILEKINY 359
Query: 361 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 420
KDDEG+ATELSFQMWT QMQETL+SKK GD+AFRHKDFRA+I+ YTQFID G ++SPT F
Sbjct: 360 KDDEGSATELSFQMWTNQMQETLSSKKNGDLAFRHKDFRAAIDSYTQFIDAGAVLSPTMF 419
Query: 421 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 480
ARRSLSYL +MPQEALNDA QAQVISPVWH+A+YLQAAALFALG NEAQ ALRE L
Sbjct: 420 ARRSLSYLACEMPQEALNDAMQAQVISPVWHIASYLQAAALFALGSNNEAQTALREGFAL 479
Query: 481 ENKKSA 486
E K +A
Sbjct: 480 ETKTTA 485
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 488 | ||||||
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.991 | 0.993 | 0.773 | 2.3e-204 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.993 | 0.995 | 0.750 | 4.5e-201 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.985 | 0.983 | 0.751 | 1.6e-196 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.989 | 0.987 | 0.696 | 2.2e-183 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.985 | 0.981 | 0.678 | 7.5e-176 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.973 | 0.983 | 0.686 | 3.2e-175 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.922 | 0.878 | 0.620 | 4.1e-152 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.983 | 0.981 | 0.566 | 1.9e-145 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.930 | 0.951 | 0.585 | 2.1e-139 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.983 | 0.961 | 0.546 | 6e-135 |
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1977 (701.0 bits), Expect = 2.3e-204, P = 2.3e-204
Identities = 376/486 (77%), Positives = 421/486 (86%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAME 59
MGCE SKL A C S+ E + +E++ G N +P F E+SIETLR ATSGFA E
Sbjct: 1 MGCEVSKLCAFCCVSD-PEGSNHGVTGLDEDRRGEGNDLPQFREFSIETLRNATSGFATE 59
Query: 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
NIVSEHGEKAPNVVYKGKL+NQ RIAVKRFNR AWPD+RQFLEEA+AVGQLRN R+ANLL
Sbjct: 60 NIVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRKAWPDSRQFLEEAKAVGQLRNYRMANLL 119
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
GCC EG+ERLLVAE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCT K RALY
Sbjct: 120 GCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALY 179
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
HDLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYS+G
Sbjct: 180 HDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYG 239
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
TLLLDLLSGKHIPPSHALDLIRDRNIQ L DSCLEGQFSSD+GTEL+RLASRCLQYEPRE
Sbjct: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRE 299
Query: 300 RPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLG 359
RPNP+SLVTA++ LQKD E PSH LMGIP A+ PLSPLG+ACLR DLTAIHEILEKL
Sbjct: 300 RPNPKSLVTAMIPLQKDLETPSHQLMGIPSSASTTPLSPLGEACLRTDLTAIHEILEKLS 359
Query: 360 YKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTA 419
YKDDEGAATELSFQMWT QMQ++LN KKKGDVAFRHK+F +I+CY+QFI+ GTMVSPT
Sbjct: 360 YKDDEGAATELSFQMWTNQMQDSLNFKKKGDVAFRHKEFANAIDCYSQFIEGGTMVSPTV 419
Query: 420 FARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASI 479
+ARRSL YLM++MPQEALNDA QAQVISP WH+ G+ENEA AAL++ S+
Sbjct: 420 YARRSLCYLMNEMPQEALNDAMQAQVISPAWHIASYLQAVALSALGQENEAHAALKDGSM 479
Query: 480 LENKKS 485
LE+K++
Sbjct: 480 LESKRN 485
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1946 (690.1 bits), Expect = 4.5e-201, P = 4.5e-201
Identities = 364/485 (75%), Positives = 418/485 (86%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGCE SKLSA C SE G + P+ ++ E + +++P F E+SIET+R ATSGFA EN
Sbjct: 1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct: 61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC E +ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ L DS LEGQFSSD+GTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV+A++ LQKD E+ SH L+G+P+ A LSPLG+ACLR DLTAIHEI+EKLGY
Sbjct: 301 PNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTTALSPLGEACLRSDLTAIHEIIEKLGY 360
Query: 361 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 420
KDDEGA TELSFQMWT QMQ+TL KKKGD AFRHKDF +IECY+QFI+VGTM SPT
Sbjct: 361 KDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVH 420
Query: 421 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASIL 480
AR+SL YLM+DMP+EALN+A QAQVISP WH+ G+ENEA AL++ ++L
Sbjct: 421 ARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAML 480
Query: 481 ENKKS 485
E+K++
Sbjct: 481 ESKRN 485
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1903 (674.9 bits), Expect = 1.6e-196, P = 1.6e-196
Identities = 363/483 (75%), Positives = 407/483 (84%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MG +CS LS CC + + A EA DV+N E + +VP F EY++E L+ ATSGFA+E
Sbjct: 1 MGGQCSSLS-CCRNTSHKTAVLEAPDVDNGESSEITDVPNFREYTLEQLKAATSGFAVEY 59
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ +IAVKRF R AWPD+RQFLEEAR+VGQLR+ R+ANLLG
Sbjct: 60 IVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMANLLG 119
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCCEGDERLLVAE+MPN+TLAKHLFHWETQPMKW MRLRV L++A+ALEYCTSK R LYH
Sbjct: 120 CCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYH 179
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR++FD++ NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGR+TPESV+YSFGT
Sbjct: 180 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGT 239
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRN+QTLTDSCL+GQFS +GTELVRLASRCLQYE RER
Sbjct: 240 LLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARER 299
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PN +SLVTAL LQK+TEV SHVLMG+PH + PLSPLG+AC R DLTA+ EILEKLGY
Sbjct: 300 PNTKSLVTALTPLQKETEVLSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILEKLGY 359
Query: 361 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 420
KDDEG ELSF MWT QMQE+LNSKKKGDVAFR KDFR +IECYTQFID G M+SPT
Sbjct: 360 KDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFID-GGMISPTVC 418
Query: 421 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASIL 480
ARRSL YLMSDMP+EAL+DA QAQVISPVWH+ G E E+Q AL+E S L
Sbjct: 419 ARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALKEGSNL 478
Query: 481 ENK 483
E K
Sbjct: 479 EAK 481
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1779 (631.3 bits), Expect = 2.2e-183, P = 2.2e-183
Identities = 342/491 (69%), Positives = 397/491 (80%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MG CSKLS C + EA D++N G D++P F E+S + LR AT GF+ ++
Sbjct: 1 MGPRCSKLSLCWWPTHLKSTHNEASDLDN----GTDDLPSFTEFSFDQLRAATCGFSTDS 56
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHG KAPNVVYKG+LE+ IAVKRFNRSAWPD RQFLEEA+AVGQLRN RLANL+G
Sbjct: 57 IVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDTRQFLEEAKAVGQLRNERLANLIG 116
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCEGDERLLVAE+MP +TL+KHLFHW++QPMKW+MRLRVAL++A+ALEYC+SK RALYH
Sbjct: 117 FCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYH 176
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRI+FD D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct: 177 DLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 236
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIR +N L DSCL+G FS+D+GT+LVRLASRCLQYE RER
Sbjct: 237 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARER 296
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA----LPLSPLGDACLRMDLTAIHEILE 356
PN +SLV++L LQK+T++PSHVLMGIPHGAA+ L+PLGDAC R DLTAIHEILE
Sbjct: 297 PNVKSLVSSLAPLQKETDIPSHVLMGIPHGAASPKETTSLTPLGDACSRHDLTAIHEILE 356
Query: 357 KLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS 416
K+GYKDDEG A ELSFQ+WT Q+QETLNSKK+GD AF+ KDF ++ECYTQFI+ GTMVS
Sbjct: 357 KVGYKDDEGVANELSFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVS 416
Query: 417 PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALRE 476
PT FARR L YLMS+MPQEAL DA QAQV+SP W G + +A L++
Sbjct: 417 PTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKD 476
Query: 477 ASILENKKSAN 487
+ LE KK N
Sbjct: 477 GTSLEAKKHNN 487
|
|
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1708 (606.3 bits), Expect = 7.5e-176, P = 7.5e-176
Identities = 333/491 (67%), Positives = 392/491 (79%)
Query: 1 MGCECSKLSACCSGSEYGEAAP-EAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAME 59
MG CSK S C S + A+ E+ D+EN K P F E+ +E L++AT GF+ +
Sbjct: 1 MGARCSKFSFCLFPSHFKSASVLESPDIENGGKVW----PTFKEFKLEQLKSATGGFSSD 56
Query: 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
NIVSEHGEKAPNVVY+G+L++ IAVKRFNR AW D RQFL+EA+AVG LR+ RLANL+
Sbjct: 57 NIVSEHGEKAPNVVYRGRLDDGRLIAVKRFNRLAWADHRQFLDEAKAVGSLRSDRLANLI 116
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
GCC EG+ERLLVAE+MP++TLAKHLFHWE PMKWAMRLRVAL +A+ALEYC++K RALY
Sbjct: 117 GCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRLRVALCLAQALEYCSNKGRALY 176
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
HDLNAYR++FD D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV++SFG
Sbjct: 177 HDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVFSFG 236
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
T+LLDL+SGKHIPPSHALDLIR +N L DS LEG FS+++GTELVRLA+RCLQYE RE
Sbjct: 237 TVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFSNEDGTELVRLATRCLQYEARE 296
Query: 300 RPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA-----LPLSPLGDACLRMDLTAIHEI 354
RPN +SLVT+LVTLQK+++V S+VLMGIPH A L L+P GDACLR+DLTAI EI
Sbjct: 297 RPNVKSLVTSLVTLQKESDVASYVLMGIPHETEAEEESPLSLTPFGDACLRVDLTAIQEI 356
Query: 355 LEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM 414
L K+GYKDDEG A ELSFQMWT QMQE+LNSKK+GD+AFR KDF +++CYTQFID GTM
Sbjct: 357 LSKIGYKDDEGIANELSFQMWTNQMQESLNSKKQGDLAFRSKDFTTAVDCYTQFIDGGTM 416
Query: 415 VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAAL 474
VSPT ARR LSYLM+D QEAL DA QAQV+SP W G E +AQ AL
Sbjct: 417 VSPTVHARRCLSYLMNDNAQEALTDALQAQVVSPDWPTALYLQAACLFKLGMEADAQQAL 476
Query: 475 REASILENKKS 485
++ + LE KKS
Sbjct: 477 KDGTTLEAKKS 487
|
|
| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1702 (604.2 bits), Expect = 3.2e-175, P = 3.2e-175
Identities = 333/485 (68%), Positives = 391/485 (80%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MG + SK+ CCS + A EA DVEN+E V+ V F EYS+E L+ ATS FA+EN
Sbjct: 1 MGGQSSKIGTCCS---HKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALEN 57
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
+VSEHGE APNVVY+GKLEN +IA+KRF+ +AWPD RQFLEEAR VGQLR++R+ANLLG
Sbjct: 58 VVSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLG 117
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCEG ERLLVAE+MPN+TLAKHLFHW+T+PMKWAMRLRVAL+I+EALEYC++ LYH
Sbjct: 118 YCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYH 177
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR++FD++ NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGR+T ESV+YSFGT
Sbjct: 178 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGT 237
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLL+GKHIPPSHALDLIRDRN+QTLTDSCLEGQFS +GTELVRL S CLQYE RER
Sbjct: 238 LLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARER 297
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPH-GAAALPLSPLGDACLRMDLTAIHEILEKLG 359
PN +SLVTAL++LQKDTEV SHVLMG+P G A P SP +AC DLT++ EILEK+G
Sbjct: 298 PNIKSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMVEILEKIG 357
Query: 360 YKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTA 419
YKDDE +LSF MWT QMQE +NSKKKGD+AFR KDF +IE YTQF+D+G M+S T
Sbjct: 358 YKDDE----DLSF-MWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLG-MISATV 411
Query: 420 FARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASI 479
RRS SYLMS+M +EAL+DA +AQ ISPVW++ G E E+Q AL E SI
Sbjct: 412 LVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGSI 471
Query: 480 LENKK 484
LE +K
Sbjct: 472 LEARK 476
|
|
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1484 (527.5 bits), Expect = 4.1e-152, P = 4.1e-152
Identities = 283/456 (62%), Positives = 348/456 (76%)
Query: 34 GVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA 93
G +P F E+S L+ AT+ F+ +NIVSE GEKAPN+VYKG+L+N+ IAVK+F + A
Sbjct: 51 GGGGIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMA 110
Query: 94 WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMK 153
WP+ +QF EEA VG+LR+ RLANL+G CC+GDERLLVAE+MPNDTLAKHLFHWE Q ++
Sbjct: 111 WPEPKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIE 170
Query: 154 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213
WAMRLRV +IAEAL+YC+++ R LYHDLNAYR++FD+D +PRLSCFGLMKNSRDG+SYS
Sbjct: 171 WAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYS 230
Query: 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273
TNLA+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +NI L DS L
Sbjct: 231 TNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHL 290
Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA 333
EG+FS++E T +V LAS+CLQYEPRERPN + LV L LQ ++VPS+V++GI A
Sbjct: 291 EGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEA 350
Query: 334 -----LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKK 388
PLSPLG+AC RMDLTAIH+IL Y+DDEG ELSFQ WT QM++ L+++K+
Sbjct: 351 PSTPQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDARKR 409
Query: 389 GDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISP 448
GD +FR KDF+ +I+CY+QFIDVGTMVSPT F RRSL YL+ D P AL DA QAQ + P
Sbjct: 410 GDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYP 469
Query: 449 VWHMXXXXXXXXXXXXGKENEAQAALREASILENKK 484
W +A L EA+ LE K+
Sbjct: 470 DWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
|
|
| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
Identities = 276/487 (56%), Positives = 355/487 (72%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAME 59
MGC SK + S + +AP + N ++ VD + F E+ + LR AT+GF+
Sbjct: 1 MGCLHSKTANLPSSDD--PSAPNKPESVNGDQ--VDQEIQNFKEFELNELRKATNGFSPS 56
Query: 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
IVSE GEKAPNVVY+GKLE +A+KRF+R +WPDA+QF+ EA VG+LRN+R+ +L+
Sbjct: 57 CIVSEGGEKAPNVVYRGKLEGNHLVAIKRFSRQSWPDAQQFVVEATGVGKLRNKRIVSLI 116
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
GCC EGDERLLVAEYMPNDTL+KHLFHWE QP+ W MR+R+A +IAEAL+YC + R +Y
Sbjct: 117 GCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDMRVRIADYIAEALDYCNIENRKIY 176
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
HDLNAYRI+FD++ +PRLS FGLMKNSRDG+SYSTNLA+TPPE+LRTGRV PESV++S+G
Sbjct: 177 HDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIFSYG 236
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
T+LLDLLSGKHIPPSHALD+IR +N L DS LEGQ+++D+ T+LV LAS+CLQ E ++
Sbjct: 237 TILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLEGQYANDDATKLVDLASKCLQSEAKD 296
Query: 300 RPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP--LSPLGDACLRMDLTAIHEILEK 357
RP+ + L++A+ LQK EV SHVLMG+P LP LSPLG AC +MDL H+IL K
Sbjct: 297 RPDTKFLLSAVAPLQKQEEVASHVLMGLPKNTVILPTMLSPLGKACAKMDLATFHDILLK 356
Query: 358 LGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP 417
GY+D+EGA ELSFQ WT Q+QE LN+KK GD+AFR KDF+ SIE Y++ + + + S
Sbjct: 357 TGYRDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDFKNSIEYYSKLVGMMPVPSA 416
Query: 418 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREA 477
T FARR+ SYLM+D + AL DA QAQV P W G E +AQ L +
Sbjct: 417 TVFARRAFSYLMTDQQELALRDAMQAQVCIPEWPTAFYLQALALSKLGMETDAQDMLNDG 476
Query: 478 SILENKK 484
+ + K+
Sbjct: 477 AAYDAKR 483
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1364 (485.2 bits), Expect = 2.1e-139, P = 2.1e-139
Identities = 271/463 (58%), Positives = 334/463 (72%)
Query: 28 ENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVK 87
+N+E+ P F E+S+E LR AT GF+ +NIVSEH E+ PN+VYKG+L + +IAVK
Sbjct: 13 DNKEEDEGSTCPNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDGRKIAVK 72
Query: 88 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 147
RF R +WPD+ +F+EEA+AVG+ R+ +ANL+GCC EG ERLLVAEYMPN+TLAKHLFHW
Sbjct: 73 RFQRLSWPDSLEFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHW 132
Query: 148 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207
E +PMKW MRLRVALH A ALEYC LYHDLN YRI+FD NPRLSCFGLMK SR
Sbjct: 133 EKRPMKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSR 192
Query: 208 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 267
+G+SYSTNLAF PPEYLR G V PESV +SFGTLLLDL+SG+HIPP+HALDL R +N
Sbjct: 193 EGKSYSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLV 252
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV-PSHVLMG 326
L DS L+GQFS ++ TEL+ LASRCL+ EP ERP+ + L++AL L+K E+ P+
Sbjct: 253 LMDSALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKEEN 312
Query: 327 IPHGAAA-------LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAAT-ELSFQMWTGQ 378
IP + LPL+P G+AC R+DL+ +HE+LEKLGY +D+ T E SFQMWTGQ
Sbjct: 313 IPTPSYTEPATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWTGQ 372
Query: 379 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALN 438
MQE ++ KK GD AFR KDF +IE YT+F+ +VSPT ARR L YLMSDM +EAL+
Sbjct: 373 MQENMDYKKHGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREALS 432
Query: 439 DASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASILE 481
DA Q QV SP + + G E EA+ ALR S LE
Sbjct: 433 DAMQTQVASPEFSIALYLQAACLLKLGMEAEAKEALRHGSSLE 475
|
|
| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
Identities = 272/498 (54%), Positives = 334/498 (67%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN----VP-VFCEYSIETLRTATSG 55
MGC C K S S S + D+EN + D+ P +F E+S+E LR AT G
Sbjct: 1 MGCICFK-SWRRSSSSPSITSTVIDDLENVREYDADDDGGHYPLIFREFSLEQLRIATDG 59
Query: 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL 115
F+ NIVSEH + PN+VYKGKL + RIAVKRF R +WPD +F+ EA+AVG+LR+ +
Sbjct: 60 FSAGNIVSEHNDSVPNIVYKGKLGDGRRIAVKRFQRLSWPDPFEFINEAQAVGRLRSEHM 119
Query: 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
ANL+GCCC+ +ERLLVAEYMPN TLAKHLFHWE +PMKW MRL+VALH A ALEYC K
Sbjct: 120 ANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKVALHTARALEYCNDKG 179
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVM 235
LYHDLN YRI+FD P+LSCFGLMKNS +G+ YSTNLAF PPEYLR G V ESV
Sbjct: 180 IDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFAPPEYLRLGTVIAESVT 239
Query: 236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
+SFGTLLLDL+SG+HIPP+HALDL R +N L DS L+GQFS ++ TEL+ +ASRC +
Sbjct: 240 FSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDEDRTELIHVASRCFKT 299
Query: 296 EPRERPNPRSLVTALVTLQKDTEV-PSHVLM-------GIPH----GAAALPLSPLGDAC 343
EP ERP+ + L L LQK ++ P +V +P +L L+P GDAC
Sbjct: 300 EPEERPSIKFLKATLSRLQKRAKLCPINVKRPMSPPSKNLPEKTKPATESLKLTPFGDAC 359
Query: 344 LRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIE 403
R DL++IHE+LEKLGY++D G E SFQMWTG+MQE ++ KK GD AF KDF +IE
Sbjct: 360 SRADLSSIHELLEKLGYEEDNGVGNEFSFQMWTGEMQENMDYKKHGDAAFLAKDFDTAIE 419
Query: 404 CYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXX 463
YT+F+ VSPT ARR L YLM++M EAL+DA QAQV SP W +
Sbjct: 420 FYTEFMTGAPTVSPTVLARRCLCYLMTEMFSEALSDAMQAQVASPEWPIPLYLQAACLFK 479
Query: 464 XGKENEAQAALREASILE 481
E EA+ ALR S LE
Sbjct: 480 LEMEAEAKEALRHGSALE 497
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FHD7 | Y5126_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7690 | 0.9938 | 0.9958 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 488 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-26 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-23 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 5e-22 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 5e-21 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-20 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-18 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-18 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-17 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 9e-16 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-15 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 3e-14 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-13 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 6e-13 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-12 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-12 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 4e-12 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 5e-12 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 5e-12 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 5e-12 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 7e-12 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-11 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-11 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-11 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 7e-11 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 8e-11 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 1e-10 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 2e-10 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 3e-10 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 3e-10 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 4e-10 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 5e-10 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 5e-10 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-09 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-09 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-09 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 6e-09 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 8e-09 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 1e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-08 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 3e-08 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 4e-08 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-08 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 4e-08 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 8e-08 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 1e-07 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-07 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-07 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 3e-07 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 4e-07 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 4e-07 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 4e-07 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 5e-07 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 7e-07 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 1e-06 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 1e-06 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-06 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 2e-06 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 3e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 3e-06 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 4e-06 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 5e-06 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 6e-06 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 6e-06 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 9e-06 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-05 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 5e-05 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 5e-05 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 7e-05 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-04 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 1e-04 | |
| PLN03088 | 356 | PLN03088, PLN03088, SGT1, suppressor of G2 allele | 1e-04 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 1e-04 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 1e-04 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 1e-04 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 1e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 1e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-04 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-04 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 4e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 4e-04 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 4e-04 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 4e-04 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 5e-04 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 6e-04 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 6e-04 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 0.001 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 0.001 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 0.001 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 0.001 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 0.001 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 0.001 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 0.002 | |
| COG0457 | 291 | COG0457, NrfG, FOG: TPR repeat [General function p | 0.002 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 0.002 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 0.002 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 0.003 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 0.004 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 0.004 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 3e-26
Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 49/245 (20%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
VY + + ++A+K + + L E + +L + + L G + +
Sbjct: 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI- 187
LV EY +L L E + LR+ L I E LEY S + H DL I
Sbjct: 68 LVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST----NLAFTPPEYLR-TGRVTPESVMYSFGTLL 242
+ D+ +L+ FGL K +S A+ PE L G + +S ++S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
+L DLIR + LQ +P +RP+
Sbjct: 185 YEL--------PELKDLIR-----------------------------KMLQKDPEKRPS 207
Query: 303 PRSLV 307
+ ++
Sbjct: 208 AKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 98.0 bits (245), Expect = 4e-23
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 72 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG L + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 126 DERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
+ ++V EYMP D L K+ + + + L AL IA +EY SK H
Sbjct: 74 EPLMIVMEYMPGGDLLDYLRKN----RPKELSLSDLLSFALQIARGMEYLESKN--FIHR 127
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVM 235
DL A + +++ ++S FGL ++ D Y + PE L+ G+ T +S +
Sbjct: 128 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDV 187
Query: 236 YSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
+SFG LL ++ + G+ + + L+ ++ +C EL +L
Sbjct: 188 WSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPP---------ELYKLML 238
Query: 291 RCLQYEPRERPNPRSLVTAL 310
+C +P +RP LV L
Sbjct: 239 QCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 94.9 bits (237), Expect = 5e-22
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 37/260 (14%)
Query: 72 VVYKGKLE-----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKGKL+ + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEE 73
Query: 126 DERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
+ +V EYM L K+ + + L AL IA +EY SK H
Sbjct: 74 EPLYIVMEYMEGGDLLSYLRKN-----RPKLSLSDLLSFALQIARGMEYLESKN--FIHR 126
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVM 235
DL A + +++ ++S FGL ++ D Y + PE L+ G+ T +S +
Sbjct: 127 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDV 186
Query: 236 YSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
+SFG LL ++ + G+ + L+ +++ +C EL L
Sbjct: 187 WSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPP---------ELYDLML 237
Query: 291 RCLQYEPRERPNPRSLVTAL 310
+C +P +RP LV L
Sbjct: 238 QCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 92.2 bits (230), Expect = 5e-21
Identities = 74/262 (28%), Positives = 113/262 (43%), Gaps = 33/262 (12%)
Query: 72 VVYKGKL----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 126
VYKGKL +AVK A + R FL+EAR + +L + + LLG C E +
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 127 ERLLVAEYMPNDTLAKHL-------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
LV EYM L +L E + L A+ IA+ +EY SK + ++
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVH 128
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
DL A + +D+ ++S FGL ++ D Y + + PE L+ G T +S
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS 188
Query: 234 VMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
++SFG LL ++ + G + L+ +R + C + EL L
Sbjct: 189 DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD---------ELYEL 239
Query: 289 ASRCLQYEPRERPNPRSLVTAL 310
C Q +P +RP LV L
Sbjct: 240 MLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 91.0 bits (227), Expect = 1e-20
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 30/257 (11%)
Query: 72 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG L + ++AVK A + R+ FLEEA + +L + + LLG C +G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
+ +V EYMP L L + + L++AL IA+ +EY SK H DL A
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAA 130
Query: 185 YRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTP-----PEYLRTGRVTPESVMYSF 238
+ +++ ++S FGL ++ D P PE L+ G+ T +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 239 GTLLLDLLSG-----KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G LL ++ + + L+L+ D ++C + EL L +C
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPD---------ELYELMLQCW 241
Query: 294 QYEPRERPNPRSLVTAL 310
Y+P +RP LV L
Sbjct: 242 AYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 1e-18
Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 16/247 (6%)
Query: 72 VVYKGKLEN-QFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
VYK K + +AVK + + E R + +L + + L+ + D
Sbjct: 14 TVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHL 73
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI 187
LV EY L +L P+ ++AL I LEY S + H DL I
Sbjct: 74 YLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHS--NGIIHRDLKPENI 129
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGR-VTPESVMYSFGTLL 242
+ D++ +++ FGL K S T TP PE L G P+ ++S G +L
Sbjct: 130 LLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVIL 189
Query: 243 LDLLSGKHIPPSHALD--LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+LL+GK + L R I + S E L +CL +P +R
Sbjct: 190 YELLTGKPPFSGENILDQLQLIRRILG-PPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKR 248
Query: 301 PNPRSLV 307
P ++
Sbjct: 249 PTAEEIL 255
|
Length = 260 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 2e-18
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V G Q ++AVK + A+ FL EA + LR+ L LLG +G+ +V
Sbjct: 22 VMLGDYRGQ-KVAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
EYM +L +L + A +L AL + E +EY K ++ DL A ++ +D
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSED 138
Query: 193 VNPRLSCFGLMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
+ ++S FGL K + G+ + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 252 P 252
P
Sbjct: 199 P 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 3e-17
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 19/239 (7%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VYKG L+ +AVK + PD ++ FL+EA + Q + + L+G C + +V
Sbjct: 11 VYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIV 70
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E +P +L L + + + L+++L A +EY SK ++ DL A + +
Sbjct: 71 MELVPGGSLLTFLRKKKNR-LTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGE 128
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
+ ++S FG M +G Y+ + + +T PE L GR T ES ++S+G LL +
Sbjct: 129 NNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWE 187
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLASRCLQYEPRERP 301
S P N QT + + + E+ RL +C Y+P RP
Sbjct: 188 TFSLGDTPYPGM------SNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRP 240
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 9e-16
Identities = 51/252 (20%), Positives = 84/252 (33%), Gaps = 34/252 (13%)
Query: 72 VVYKGK-LENQFRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
VY + + +A+K + D + L E + + +L++ + L + D+
Sbjct: 14 KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYR-- 186
LV EY L L A I ALEY H +R
Sbjct: 74 LVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYL--------HSKGIVHRDL 123
Query: 187 ----IVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESVMYSFG 239
I+ D+D + +L+ FGL + G +T + PE L ++S G
Sbjct: 124 KPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLG 183
Query: 240 TLLLDLLSGK-----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294
+L +LL+GK I S E +L+R + L
Sbjct: 184 VILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD----ISPEAKDLIR---KLLV 236
Query: 295 YEPRERPNPRSL 306
+P +R
Sbjct: 237 KDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 75.0 bits (184), Expect = 3e-15
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 20/251 (7%)
Query: 66 GEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 125
GE V +G+ Q ++AVK N A+ FLEE + +L ++ L LLG
Sbjct: 15 GEGEFGAVLQGEYTGQ-KVAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH- 70
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
+ +V E M L L + L+ +L +AE +EY SK + ++ DL A
Sbjct: 71 NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAAR 129
Query: 186 RIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
I+ +D ++S FGL + S + + +T PE L+ + + +S ++S+G LL +
Sbjct: 130 NILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189
Query: 245 LLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRE 299
+ S G+ P +L +++ C+E + + EG ++ L + C + EP++
Sbjct: 190 VFSYGRAPYPKMSLKEVKE---------CVEKGYRMEPPEGCPADVYVLMTSCWETEPKK 240
Query: 300 RPNPRSLVTAL 310
RP+ L L
Sbjct: 241 RPSFHKLREKL 251
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 3e-14
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 14/236 (5%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+KG L+++ +AVK + + +FL EAR + Q + + L+G C + +V
Sbjct: 11 VFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIV 70
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E +P L + +K ++ AL A + Y SK ++ DL A + +
Sbjct: 71 MELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGE 128
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
+ ++S FG+ + DG S+ L +T PE L GR + ES ++S+G LL +
Sbjct: 129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188
Query: 247 SGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
S P P R++ + SC Q D ++ ++ RC Y+P RP
Sbjct: 189 SLGVCPYPGMTNQQAREQVEKGYRMSC--PQKCPD---DVYKVMQRCWDYKPENRP 239
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 2e-13
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 24/253 (9%)
Query: 73 VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
V+ G+L + +AVK + PD + +FL+EAR + Q + + L+G C + +
Sbjct: 11 VFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 70
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
V E + L E +K +++ + A +EY SK ++ DL A +
Sbjct: 71 VMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVT 128
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
+ ++S FG+ + DG ST + +T PE L GR + ES ++SFG LL +
Sbjct: 129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188
Query: 245 LLSGKHIPPSHALDLIRDRNIQT-----LTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
S +P ++ + I+ + C + + RL RC +Y+P +
Sbjct: 189 AFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPD---------AVYRLMERCWEYDPGQ 239
Query: 300 RPNPRSLVTALVT 312
RP+ ++ L +
Sbjct: 240 RPSFSTVHQELQS 252
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 2e-13
Identities = 69/292 (23%), Positives = 124/292 (42%), Gaps = 42/292 (14%)
Query: 48 TLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARA 106
T+ S EN++S + A YKGK ++N + VK N + + +
Sbjct: 684 TINDILSSLKEENVISRGKKGAS---YKGKSIKNGMQFVVKEINDVNSIPSSEIAD---- 736
Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE 166
+G+L++ + L+G C L+ EY+ L++ L + + W R ++A+ IA+
Sbjct: 737 MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAK 791
Query: 167 ALEY--CTSKERALYHDLNAYRIVFDDDVNPRLSCFGL-----MKNSRDGRSYSTNLAFT 219
AL + C + +L+ +I+ D P L L S A+
Sbjct: 792 ALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLPGLLCTDTKCFISS-----AYV 845
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA--------LDLIR----DRNIQT 267
PE T +T +S +Y FG +L++LL+GK P+ A ++ R D ++
Sbjct: 846 APETRETKDITEKSDIYGFGLILIELLTGKS--PADAEFGVHGSIVEWARYCYSDCHLDM 903
Query: 268 LTDSCLEGQFSSD--EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317
D + G S + E E++ LA C +P RP ++ L + + +
Sbjct: 904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955
|
Length = 968 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 6e-13
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 61 IVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNR 113
+ E GE A V+ G+ + + +AVK +A DAR+ F EA + ++
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHL------------FHWETQPMKWAMRLRVA 161
+ G C EGD ++V EYM + L K L + + L++A
Sbjct: 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128
Query: 162 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------ 215
+ IA + Y S + ++ DL + D+ ++ FG+ SRD Y+T+
Sbjct: 129 VQIASGMVYLAS-QHFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVGG 182
Query: 216 -----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK 249
+ + PPE + + T ES ++SFG +L ++ + GK
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-12
Identities = 56/243 (23%), Positives = 110/243 (45%), Gaps = 19/243 (7%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V++G +N+ R+A+K + F +E +A+ +LR++ L +L C G+ ++
Sbjct: 22 VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
E M +L L E Q + A + +A +AE + Y + +++ DL A I+ +D
Sbjct: 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGED 140
Query: 193 VNPRLSCFGLMKNSRDG--RSYSTNLAF--TPPEYLRTGRVTPESVMYSFGTLLLDLLSG 248
+ +++ FGL + ++ S + + T PE G + +S ++SFG LL ++ +
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200
Query: 249 KHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303
+P D I C + E+ ++ C EP +RP+
Sbjct: 201 GQVPYPGMNNHEVYDQITAGYRMPCPAKCPQ---------EIYKIMLECWAAEPEDRPSF 251
Query: 304 RSL 306
++L
Sbjct: 252 KAL 254
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-12
Identities = 69/297 (23%), Positives = 120/297 (40%), Gaps = 54/297 (18%)
Query: 56 FAMENI--VSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARA 106
+ + + E GE A VYKG+L + +A+K +A P +Q F +EA
Sbjct: 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAEL 61
Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-------------HWETQPMK 153
+ L++ + LLG C + ++ EY+ + L + L +
Sbjct: 62 MSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSL 121
Query: 154 WAMR-LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
L +A+ IA +EY +S ++ DL A + + + ++S FGL SRD Y
Sbjct: 122 DCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKISDFGL---SRDI--Y 175
Query: 213 STN-----------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHA 256
S + + + PPE + G+ T ES ++SFG +L ++ S P
Sbjct: 176 SADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV 235
Query: 257 LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313
+++IR R + + C + L C P RP + + T L +
Sbjct: 236 IEMIRSRQLLPCPEDC---------PARVYALMIECWNEIPARRPRFKDIHTRLRSW 283
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 2e-12
Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 33/269 (12%)
Query: 73 VYKGKLENQF-----RIAVKRFNRSAWPDARQFLEEARAVGQLRN---RRLANLLGCCCE 124
V + + ++AVK N S R E R + LR + G C +
Sbjct: 20 VELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFE--REIEILRTLDHENIVKYKGVCEK 77
Query: 125 GDER--LLVAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
R L+ EY+P+ +L +L H + +K L + I + ++Y S+ R ++ D
Sbjct: 78 PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQICKGMDYLGSQ-RYIHRD 134
Query: 182 LNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFTP-----PEYLRTGRVTPESV 234
L A I+ + + ++S FGL K Y +P PE LRT + + S
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194
Query: 235 MYSFGTLLLDLLS-GKH--IPPSHALDLI---RDRNIQT-LTDSCLEGQ-FSSDEG--TE 284
++SFG L +L + G PP+ L +I + + I T L + EG+ E
Sbjct: 195 VWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDE 254
Query: 285 LVRLASRCLQYEPRERPNPRSLVTALVTL 313
+ L C + EP++RP+ L+ + L
Sbjct: 255 VYDLMKLCWEAEPQDRPSFADLILIVDRL 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 4e-12
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 74 YKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVA 132
Y+G ++AVK A A+ FL EA + QLR+ L LLG E L +V
Sbjct: 27 YRGN-----KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
EYM +L +L + L+ +L + EA+EY + ++ DL A ++ +D
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSED 138
Query: 193 VNPRLSCFGLMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
++S FGL K + + + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 252 P 252
P
Sbjct: 199 P 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 67.1 bits (162), Expect = 5e-12
Identities = 58/274 (21%), Positives = 95/274 (34%), Gaps = 29/274 (10%)
Query: 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLR-NRRL 115
I+ + GE + VY + ++ +A+K + +FL E + + L +
Sbjct: 3 RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60
Query: 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSK 174
L + LV EY+ +L L P+ + L + I ALEY SK
Sbjct: 61 VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120
Query: 175 ERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDGRSYSTN----------LAFTPPEY 223
++ D+ I+ D D +L FGL K D S S+ + PE
Sbjct: 121 -GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV 179
Query: 224 LR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---RNIQTLTDSCLEGQF 277
L + S ++S G L +LL+G + I L L
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL 239
Query: 278 SSDEG----TELVRLASRCLQYEPRERPNPRSLV 307
S L + L +P+ R + S +
Sbjct: 240 SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDL 273
|
Length = 384 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 5e-12
Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 36/277 (12%)
Query: 60 NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 68
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLR----VALHI 164
+ LLG +G L+V E M + L +L E P + L+ +A I
Sbjct: 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
A+ + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCL 273
PE L+ G T S M+SFG +L ++ S P L + D D+C
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 247
Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
E + L C Q+ P+ RP +V L
Sbjct: 248 E---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 5e-12
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 28/242 (11%)
Query: 73 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G ++A+K + S P+A FL EA + QL++ RL L + + ++
Sbjct: 22 VWMGYYNGHTKVAIKSLKQGSMSPEA--FLAEANLMKQLQHPRLVRLYAVVTQ-EPIYII 78
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM N +L L E + + +A IAE + + K ++ DL A I+ +
Sbjct: 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSE 137
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL +
Sbjct: 138 TLCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 195
Query: 245 LLSGKHIPPSHALDLIRDRNIQTL-----TDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
+++ IP + +N++ D+C E EL L C + +P E
Sbjct: 196 IVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPE---------ELYELMRLCWKEKPEE 246
Query: 300 RP 301
RP
Sbjct: 247 RP 248
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 7e-12
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 24/260 (9%)
Query: 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 121
+ E G VV+ GK + +A+K A + F+EEA+ + +L + L L G
Sbjct: 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE-DDFIEEAKVMMKLSHPNLVQLYGV 67
Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALY 179
C + +V EYM N L +L + K L + + EA+EY S ++
Sbjct: 68 CTKQRPIFIVTEYMANGCLLNYL---RERKGKLGTEWLLDMCSDVCEAMEYLESNG-FIH 123
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 234
DL A + +D ++S FGL + D + S+ + + PPE R + +S
Sbjct: 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSD 183
Query: 235 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE----GTELVRLAS 290
++SFG L+ ++ S +P R N + + +S G + TE+ +
Sbjct: 184 VWSFGVLMWEVFSEGKMPYE------RFSNSEVV-ESVSAG-YRLYRPKLAPTEVYTIMY 235
Query: 291 RCLQYEPRERPNPRSLVTAL 310
C +P +RP + L++ L
Sbjct: 236 SCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-11
Identities = 58/256 (22%), Positives = 115/256 (44%), Gaps = 34/256 (13%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV GK Q+ +A+K + + +F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77
Query: 132 AEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
EYM N + L +H ++ + L + + E + Y SK+ ++ DL A
Sbjct: 78 TEYMSNGCLLNYLREHGKRFQPSQL-----LEMCKDVCEGMAYLESKQ-FIHRDLAARNC 131
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLL 242
+ DD ++S FGL + D S+ + ++PPE L + + +S +++FG L+
Sbjct: 132 LVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM 191
Query: 243 LDLLSGKHIPPSHALDLIRDR-NIQTLTDSCLEG------QFSSDEGTELVRLASRCLQY 295
++ S +P +R N + +G +S+ ++ + C
Sbjct: 192 WEVYSLGKMP--------YERFNNSETVEKVSQGLRLYRPHLASE---KVYAIMYSCWHE 240
Query: 296 EPRERPNPRSLVTALV 311
+ ERP + L++++
Sbjct: 241 KAEERPTFQQLLSSIE 256
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 2e-11
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 64 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHL--FHWETQ------PMKWAMRLRVALHIAEAL 168
LLG +G L++ E M L +L E + P +++A IA+ +
Sbjct: 73 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 133 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLF 251
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
EL+R+ C QY P+ RP+ +++++
Sbjct: 252 ------ELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 3e-11
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 84 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
+AVK R + +E + L + + GCC E + L+ EY+P +L
Sbjct: 36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
+L + A L A I E + Y S+ ++ DL A ++ D+D ++ F
Sbjct: 96 RDYL---PKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDF 151
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 250
GL K +G Y + + + E L+ + + S ++SFG L +LL+ K
Sbjct: 152 GLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211
Query: 251 IPPSHALDLIRDRNIQT----LTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNP 303
PP ++I + Q L + G + E+ L C + E + RP
Sbjct: 212 SPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF 271
Query: 304 RSLVTALVTL 313
RSL+ L +
Sbjct: 272 RSLIPILKEM 281
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 7e-11
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 32/254 (12%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV+ GK Q ++A+K N A + F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVHLGKWRAQIKVAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E+M N L +L + + K M L + + E +EY + ++ DL A +
Sbjct: 78 TEFMENGCLLNYLRQRQGKLSK-DMLLSMCQDVCEGMEY-LERNSFIHRDLAARNCLVSS 135
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++S FG+ + D S++ A ++PPE + + +S ++SFG L+ ++
Sbjct: 136 TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR--LAS--------RCLQYE 296
+ +P + N + + G L R LAS C +
Sbjct: 196 TEGKMP------FEKKSNYEVVE--------MISRGFRLYRPKLASMTVYEVMYSCWHEK 241
Query: 297 PRERPNPRSLVTAL 310
P RP L+ A+
Sbjct: 242 PEGRPTFAELLRAI 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 8e-11
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL-FHWETQPMKWAMRL 158
F E A + QL ++ L G C GDE ++V EY+ +L +L + + W +L
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103
Query: 159 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--- 214
VA +A AL + +++ L H ++ A ++ + + + +K S G S +
Sbjct: 104 EVAKQLAWALHFL--EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161
Query: 215 -----NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
+ + PPE + + ++ + +SFGT L ++ SG P S ALD + +Q
Sbjct: 162 EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD--SQKKLQFY 218
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
D Q + + TEL L ++C+ YEP RP+ R+++ L
Sbjct: 219 ED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ G ++AVK + FL+EA+ + +LR+ +L L C E + +V
Sbjct: 22 VWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
EYM +L L E + ++ + +A IAE + Y S+ ++ DL A I+ ++
Sbjct: 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGEN 139
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
+ +++ FGL + +R+G + + +T PE GR T +S ++SFG LL ++
Sbjct: 140 LVCKIADFGLARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEI 197
Query: 246 LSGKHIP 252
++ +P
Sbjct: 198 VTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 2e-10
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 73 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G ++AVK P++ FLEEA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGNTKVAVKTLKPGTMSPES--FLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIV 78
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM +L L E + +K + +A +A + Y + ++ DL + I+ D
Sbjct: 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-IERMNYIHRDLRSANILVGD 137
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
+ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 138 GLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195
Query: 245 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
L++ +P P + +R + + D L L +C + +P ERP
Sbjct: 196 LVTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 3e-10
Identities = 59/272 (21%), Positives = 107/272 (39%), Gaps = 37/272 (13%)
Query: 66 GEKAPNVVYKGKLE----NQFRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
GE V +G+L +Q ++AVK + + + + +FL EA + + + L+
Sbjct: 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67
Query: 120 GCCCEGDER------LLVAEYMPNDTLAKHLFH--WETQPMKWA--MRLRVALHIAEALE 169
G C E +++ +M + L L + P K L+ + IA +E
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EY 223
Y +++ ++ DL A + +D+ ++ FGL K G Y P E
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186
Query: 224 LRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFS 278
L T +S +++FG + ++ + P D +R N + CL+
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLD---- 242
Query: 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
EL L C + +P++RP L L
Sbjct: 243 -----ELYDLMYSCWRADPKDRPTFTKLREVL 269
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 3e-10
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 20/238 (8%)
Query: 73 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G ++A+K + P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGTTKVAIKTLKPGTMMPEA--FLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIV 78
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E+M +L L + + +K + +A IA+ + Y + ++ DL A I+ D
Sbjct: 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAY-IERMNYIHRDLRAANILVGD 137
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 138 NLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195
Query: 245 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
L++ +P P + ++ + C +G S L L C + +P ERP
Sbjct: 196 LVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPES-----LHELMKLCWKKDPDERP 248
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 4e-10
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 73 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 78
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 137
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 138 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195
Query: 245 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
L + +P P + D+ + C + L L +C + EP ERP
Sbjct: 196 LTTKGRVPYPGMVNREVLDQVERGYRMPC-----PPECPESLHDLMCQCWRKEPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 5e-10
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 121
V E G +V+ G + ++A+K A + F+EEA+ + +L + +L L G
Sbjct: 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE-EDFIEEAQVMMKLSHPKLVQLYGV 67
Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALY 179
C E LV E+M + L+ +L Q K++ L + L + E + Y S ++
Sbjct: 68 CTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQETLLGMCLDVCEGMAYLESSN-VIH 123
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 234
DL A + ++ ++S FG+ + D + S+ + ++ PE + + +S
Sbjct: 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD 183
Query: 235 MYSFGTLLLDLLSGKHIP 252
++SFG L+ ++ S P
Sbjct: 184 VWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 5e-10
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ G N ++AVK + + FLEEA + L++ +L L + + ++
Sbjct: 22 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
EYM +L L E + + + IAE + Y ++ ++ DL A ++ +
Sbjct: 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY-IERKNYIHRDLRAANVLVSES 139
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEI 197
Query: 246 LSGKHIP 252
++ IP
Sbjct: 198 VTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 58.2 bits (140), Expect = 2e-09
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 42/268 (15%)
Query: 79 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
+++ +AVK ++ + F EA + L++ + G C EGD ++V EYM +
Sbjct: 33 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 92
Query: 139 TLAKHL--------FHWETQP---MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
L K L E + + L +A IA + Y S + ++ DL
Sbjct: 93 DLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNC 151
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPESVMY 236
+ +++ ++ FG+ SRD YST+ + + PPE + + T ES ++
Sbjct: 152 LVGENLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 206
Query: 237 SFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291
S G +L ++ + GK + + ++ I + +C + E+ L
Sbjct: 207 SLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPK---------EVYDLMLG 257
Query: 292 CLQYEPRERPNPRSLVTALVTLQKDTEV 319
C Q EP R N + + + L L K + V
Sbjct: 258 CWQREPHMRLNIKEIHSLLQNLAKASPV 285
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 3e-09
Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 84 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
+AVK +FL+EA + ++++ L LLG C ++ E+M L +
Sbjct: 34 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92
Query: 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203
L Q + + L +A I+ A+EY K ++ DL A + ++ +++ FGL
Sbjct: 93 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 151
Query: 204 KNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL 257
+ G +Y+ + + +T PE L + + +S +++FG LL ++ + + P +
Sbjct: 152 RLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 209
Query: 258 DLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERPNPRSLVTALVTL 313
DL + L LE + + EG ++ L C Q+ P +RP+ + A T+
Sbjct: 210 DL---SQVYEL----LEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 5e-09
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 45/271 (16%)
Query: 79 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
+++ +AVK + F EA + L++ + G C +GD ++V EYM +
Sbjct: 33 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 92
Query: 139 TLAKHL--------FHWETQPMK------WAMRLRVALHIAEALEYCTSKERALYHDLNA 184
L K L + QP + + L +A IA + Y S + ++ DL
Sbjct: 93 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLAT 151
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPES 233
+ ++ ++ FG+ SRD YST+ + + PPE + + T ES
Sbjct: 152 RNCLVGANLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 206
Query: 234 VMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
++SFG +L ++ + GK + + ++ I + C + E+ +
Sbjct: 207 DVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK---------EVYDI 257
Query: 289 ASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
C Q EP++R N + + L L K T +
Sbjct: 258 MLGCWQREPQQRLNIKEIYKILHALGKATPI 288
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 6e-09
Identities = 55/182 (30%), Positives = 76/182 (41%), Gaps = 18/182 (9%)
Query: 126 DERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
+E+L LV EY P L HL + A R A I ALEY S +Y DL
Sbjct: 65 EEKLYLVLEYAPGGELFSHLSKEGRFSEERA-RFYAA-EIVLALEYLHSL-GIIYRDLKP 121
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D D + +L+ FGL K S + TP PE L +S G
Sbjct: 122 ENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGV 181
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSDEGTELVRLASRCLQYEPR 298
LL ++L+GK PP +A + + + + L+ F E L S LQ +P
Sbjct: 182 LLYEMLTGK--PPFYA------EDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPT 233
Query: 299 ER 300
+R
Sbjct: 234 KR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 8e-09
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 40/267 (14%)
Query: 64 EHGEKAPNVVYKGKLENQFR----IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANL 118
E GE V +G+L+ + +A+K + R FL EA +GQ + + L
Sbjct: 16 EFGE-----VCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRL 70
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
G + +++ EYM N +L K L + + + + IA ++Y + E
Sbjct: 71 EGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLS--EMNY 127
Query: 179 YH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTN-----LAFTPPEYLRTGRVTP 231
H DL A I+ + ++ ++S FGL + D + Y+T + +T PE + + T
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTS 187
Query: 232 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--------SCLEGQFSSDEGT 283
S ++SFG ++ +++S P D+ I+ + D C
Sbjct: 188 ASDVWSFGIVMWEVMSYGERP---YWDMSNQDVIKAVEDGYRLPPPMDCPSA-------- 236
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
L +L C Q + ERP +V+ L
Sbjct: 237 -LYQLMLDCWQKDRNERPTFSQIVSTL 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 56 FAMENIV--SEHGEKAPNVVYKGKLEN------QFRIAVKRFN-RSAWPDARQFLEEARA 106
E I E G+ + +VY+G + + R+A+K N ++ + +FL EA
Sbjct: 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASV 62
Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------FHWETQPMKWAMRL 158
+ + + LLG G L+V E M L +L + P +
Sbjct: 63 MKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFI 122
Query: 159 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--- 215
++A IA+ + Y +K + ++ DL A + +D+ ++ FG+ +RD Y T+
Sbjct: 123 QMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYR 176
Query: 216 --------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP---PSH--ALDLIRD 262
+ + PE L+ G T +S ++SFG +L ++ + P S+ L + D
Sbjct: 177 KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID 236
Query: 263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
L ++C + +L+ L C QY P+ RP
Sbjct: 237 GGHLDLPENCPD---------KLLELMRMCWQYNPKMRP 266
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V++G N +AVK + D + FL EA+ + +LR+ +L L C + +V
Sbjct: 22 VWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
E M +L ++L + +K + +A +A + Y + + ++ DL A ++ ++
Sbjct: 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGEN 139
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
+++ FGL + +R+G + + +T PE R + +S ++SFG LL ++
Sbjct: 140 NICKVADFGLARVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEI 197
Query: 246 LSGKHIP 252
++ +P
Sbjct: 198 VTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 3e-08
Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 42/265 (15%)
Query: 66 GEKAPNVVYKGKL---ENQFRIAVKRF-----NRSAWPDARQFLEEARAVGQLRNRRLAN 117
GE V +G+L ++ ++AVK RS D FL EA + + + +
Sbjct: 8 GEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMED---FLSEAVCMKEFDHPNVMR 64
Query: 118 LLGCCCEGDER------LLVAEYMPNDTLAKHLFHWE--TQP--MKWAMRLRVALHIAEA 167
L+G C + E +++ +M + L L + P + M ++ IA
Sbjct: 65 LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPP 221
+EY +SK ++ DL A + ++++N ++ FGL K R GR + +
Sbjct: 125 MEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQ 276
E L T +S ++SFG + ++ + P S D +R N CL+G
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGL 243
Query: 277 FSSDEGTELVRLASRCLQYEPRERP 301
+S L S C P++RP
Sbjct: 244 YS---------LMSSCWLLNPKDRP 259
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 4e-08
Identities = 53/241 (21%), Positives = 93/241 (38%), Gaps = 23/241 (9%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VYK + +A+K + + + E + + + ++ + G + DE +
Sbjct: 15 EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
V E+ +L K L Q + + V + + LEY S ++ D+ A I+
Sbjct: 75 VMEFCSGGSL-KDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLT 132
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
D +L FGL D ++ + TP PE + ++ ++S G ++L
Sbjct: 133 SDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELA 191
Query: 247 SGKHIPPSH------ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
GK PP AL I L + SDE + + +CLQ P +R
Sbjct: 192 EGK--PPYSELPPMKALFKIATNGPPGL----RNPEKWSDEFKDFL---KKCLQKNPEKR 242
Query: 301 P 301
P
Sbjct: 243 P 243
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 19/156 (12%)
Query: 158 LRVALHIAEALEYC----TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213
R+ + AL C L+ DL I D + N +L FGL K S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167
Query: 214 TNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQ 266
TP PE L +S ++S G L+ +L + PP A L L I+
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTARNQLQLA--SKIK 223
Query: 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
+ ++SS EL + L +P +RP+
Sbjct: 224 EGKFRRIPYRYSS----ELNEVIKSMLNVDPDKRPS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 4e-08
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 19/252 (7%)
Query: 66 GEKAPNVVYKGKLENQFRI-AVKRFNRSAWPDARQ--FLEEARAVGQLRNRRLANLLGCC 122
G+ + VV+K + R+ A+K+ + S + ++EAR + +L + +
Sbjct: 9 GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68
Query: 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
+ + +V EY N L K L +P+ R + I L + SK + L+ D+
Sbjct: 69 LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDI 127
Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSF 238
+ + D N ++ G+ K D +++ + TP PE +S +++
Sbjct: 128 KSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWAL 187
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQY 295
G +L + +GKH P A N L + G F S +L +L +CL
Sbjct: 188 GVVLYECCTGKH--PFDA------NNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTK 239
Query: 296 EPRERPNPRSLV 307
+ R+RP+ L+
Sbjct: 240 DYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 8e-08
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 96 DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWA 155
D+ F E A + QL ++ L L G C DE ++V EY+ L L H E +
Sbjct: 44 DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFL-HREKNNVSLH 101
Query: 156 MRLRVALHIAEALEYCTSKE--------RALY---HDLNAYRIVFDDDVNPRLSCFGLMK 204
+L VA +A AL Y K+ + + + LN + F +P + L +
Sbjct: 102 WKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR 161
Query: 205 NSRDGRSYSTNLAFTPPEYLRTGRVTPESVM--YSFGTLLLDLLSGKHIP-----PSHAL 257
R R + PE +R G+ + +SFGT LL++ S P S
Sbjct: 162 EERVERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE 216
Query: 258 DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311
+D++ + D EL L ++C Y+P +RP+ R+++ L
Sbjct: 217 RFYQDQHRLPMPDC-----------AELANLINQCWTYDPTKRPSFRAILRDLN 259
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 1e-07
Identities = 56/261 (21%), Positives = 104/261 (39%), Gaps = 44/261 (16%)
Query: 84 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVK AR FL+E + + +L+N + LLG C D ++ EYM N L +
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106
Query: 143 HLFHWETQP----------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
L E + + A L +A+ IA ++Y S ++ DL + +
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNH 165
Query: 193 VNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLLLDLL 246
+++ FG+ +N G Y P E + G+ T S +++FG L ++
Sbjct: 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCL---EGQFSSDEGTE------------LVRLASR 291
+ L +++ L+D + G+F ++G + + +L R
Sbjct: 226 T-----------LCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMR 274
Query: 292 CLQYEPRERPNPRSLVTALVT 312
C + ++RP + L
Sbjct: 275 CWSRDIKDRPTFNKIHHFLRE 295
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 52/268 (19%)
Query: 84 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVK A +AR FL+E + + +L++ + LLG C + D ++ EYM N L +
Sbjct: 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108
Query: 143 HLFHWETQ-----------------PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
L + ++ L VAL IA ++Y +S ++ DL
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATR 167
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFG 239
+ +++ +++ FG+ +N G Y P E + G+ T S +++FG
Sbjct: 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL---EGQFSSDEGTE------------ 284
L ++L L +++ LTD + G+F D+G +
Sbjct: 228 VTLWEILM-----------LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQG 276
Query: 285 LVRLASRCLQYEPRERPNPRSLVTALVT 312
L L +C + RERP S + A +T
Sbjct: 277 LYELMLQCWSRDCRERP-SFSDIHAFLT 303
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 46/253 (18%)
Query: 84 IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 140
+AVK +A + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 141 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
+ +L + + + + + A I+ ++Y E L H
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA--EMKLVH 150
Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
DL A ++ + ++S FGL ++ + SY + + E L T +S
Sbjct: 151 RDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQS 210
Query: 234 VMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
++SFG LL ++++ G + I P +L++ ++C E E+ L
Sbjct: 211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSE---------EMYNL 261
Query: 289 ASRCLQYEPRERP 301
C + EP +RP
Sbjct: 262 MLTCWKQEPDKRP 274
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 98 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
R FL EA +GQ + + L G G+ ++V EYM N L L E Q + A +
Sbjct: 51 RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQ 108
Query: 158 LRVALH-IAEALEYCTSKERALYHD-LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215
L L +A ++Y + E H L A++++ + D+ ++S F ++ + Y+T
Sbjct: 109 LMGMLPGLASGMKYLS--EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTM 166
Query: 216 -----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
+ + PE ++ + S ++SFG ++ +++S
Sbjct: 167 SGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 4e-07
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 159
FL EA + L++ +L L + + ++ E+M +L L E +
Sbjct: 48 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 106
Query: 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSY 212
+ IAE + + + ++ DL A I+ + +++ FGL + +R+G +
Sbjct: 107 FSAQIAEGMAF-IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165
Query: 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDRNIQ 266
+ +T PE + G T +S ++SFG LL+++++ IP P L R +
Sbjct: 166 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 223
Query: 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
++C E EL + RC + P ERP
Sbjct: 224 R-PENCPE---------ELYNIMMRCWKNRPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 4e-07
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 32/257 (12%)
Query: 72 VVYKGKL--ENQFRI--AVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
VY G L + +I AVK NR + + QFL+E + + + +LLG C +
Sbjct: 10 CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69
Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
L+V YM + L ++ ET + L +A+ +EY SK + ++ DL A
Sbjct: 70 GSPLVVLPYMKHGDL-RNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAAR 127
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYS 237
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++S
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWS 187
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG------QFSSDEGTELVRLASR 291
FG LL +L++ + PP D + +T L+G ++ D L +
Sbjct: 188 FGVLLWELMT-RGAPP------YPDVDSFDITVYLLQGRRLLQPEYCPD---PLYEVMLS 237
Query: 292 CLQYEPRERPNPRSLVT 308
C +P RP LV+
Sbjct: 238 CWHPKPEMRPTFSELVS 254
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 4e-07
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
G++ ++ D+ ++E Y + +++ + A+ + +Y +EAL D +A
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALE 62
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
+ P A Y A + LGK EA A +A L+
Sbjct: 63 LDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELD 98
|
Length = 100 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 5e-07
Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 49/268 (18%)
Query: 68 KAPNVVYKGKLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 126
+AP ++ E +AVK A D + F EA + + + + LLG C G
Sbjct: 25 RAPGLL---PYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81
Query: 127 ERLLVAEYMPNDTLAKHLFH----WETQ----------------PMKWAMRLRVALHIAE 166
L+ EYM L + L H + P+ +L +A +A
Sbjct: 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA 141
Query: 167 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN--SRDGRSYSTNLA----FT 219
+ Y + ER H DL + +++ +++ FGL +N S D S N A +
Sbjct: 142 GMAYLS--ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWM 199
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD------LIRDRNIQTLTDSCL 273
PPE + R T ES ++++G +L ++ S + P + + +RD N+ + D+C
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFS-YGMQPYYGMAHEEVIYYVRDGNVLSCPDNC- 257
Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERP 301
EL L C P +RP
Sbjct: 258 --------PLELYNLMRLCWSKLPSDRP 277
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 7e-07
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 48/284 (16%)
Query: 62 VSEHGEKAPNVVYKGKL-----ENQFRIAVKRF----NRSAWPDARQFLEEARAVGQLRN 112
+ E GE A +YKG L ++ +A+K N W + F +EA + +L +
Sbjct: 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE---FQQEASLMAELHH 66
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-----------ETQPMKWAMR---- 157
+ LLG + ++ EY+ L + L E +K ++
Sbjct: 67 PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF 126
Query: 158 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-- 215
L +A+ IA +EY +S ++ DL A I+ + ++ ++S GL + Y
Sbjct: 127 LHIAIQIAAGMEYLSS-HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 216 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQ 266
+ + PPE + G+ + +S ++SFG +L ++ S P ++++R R +
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245
Query: 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
++ C +S L + C Q P RP + + T L
Sbjct: 246 PCSEDCPPRMYS---------LMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 1e-06
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 35/256 (13%)
Query: 73 VYKGKL-------ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
VY+G R+AVK + A + +FL+EA + + + LLG C
Sbjct: 11 VYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL 70
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAM-----RLRVALHIAEALEYCTSKERALY 179
+ + ++ E M L +L + + L + L +A+ Y + ++
Sbjct: 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY-LEQMHFIH 129
Query: 180 HDLNAYRIV-----FDDDVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGR 228
DL A + +D D ++ FGL ++ Y + + PE L G+
Sbjct: 130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK 189
Query: 229 VTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--EL 285
T +S ++SFG L+ ++L+ P P+ N + L G+ E ++
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPALN-------NQEVLQHVTAGGRLQKPENCPDKI 242
Query: 286 VRLASRCLQYEPRERP 301
+L + C +P ERP
Sbjct: 243 YQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 24/241 (9%)
Query: 79 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
E + ++ +K + S + F E A + Q+ ++ + L G C E ++V E++
Sbjct: 30 EKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFG 89
Query: 139 TLAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH------DLNAYRIVFDD 191
L LF H ++ + + +VA +A AL Y K+ L H ++ R D
Sbjct: 90 PL--DLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREGIDG 145
Query: 192 DVNP--RLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSG 248
+ P +LS G+ + + + PE + + + + +SFGT L ++
Sbjct: 146 ECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN 205
Query: 249 KHIPPSHALDLIRDRNIQTLTDSCLEGQF--SSDEGTELVRLASRCLQYEPRERPNPRSL 306
IP ++D+ + + EGQ + EL L + C+ Y+P +RP R++
Sbjct: 206 GEIP-------LKDKTLAE-KERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAI 257
Query: 307 V 307
+
Sbjct: 258 M 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 2e-06
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 64 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANL 118
E GE V++G L+ + +A+K RQ FL EA +GQ + + L
Sbjct: 17 EFGE-----VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL 71
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
G + +++ EYM N L K+L E + LR IA ++Y S
Sbjct: 72 EGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR---GIAAGMKY-LSDMN 127
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN-----LAFTPPEYLRTGRV 229
++ DL A I+ + ++ ++S FGL + D +Y+T+ + +T PE + +
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187
Query: 230 TPESVMYSFGTLLLDLLS 247
T S ++SFG ++ +++S
Sbjct: 188 TSASDVWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 2e-06
Identities = 65/250 (26%), Positives = 108/250 (43%), Gaps = 40/250 (16%)
Query: 81 QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM---PN 137
+ R+ +K + S A F E A + Q+ + LA + G C G E ++V E++ P
Sbjct: 44 ELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPL 103
Query: 138 DT-LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH------DLNAYRIVFD 190
D L K P+ W ++ VA +A AL Y K L H ++ R+
Sbjct: 104 DVCLRKEKGR---VPVAW--KITVAQQLASALSYLEDKN--LVHGNVCAKNILLARLGLA 156
Query: 191 DDVNP--RLS--CFGLMKNSRDGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDL 245
+ +P +LS SR+ R + + PE + G ++ + +SFGT LL++
Sbjct: 157 EGTSPFIKLSDPGVSFTALSREERV--ERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214
Query: 246 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+P PS + ++ + SC EL L S+CL YEP +R
Sbjct: 215 CFDGEVPLKERTPSEK-ERFYEKKHRLPEPSC----------KELATLISQCLTYEPTQR 263
Query: 301 PNPRSLVTAL 310
P+ R+++ L
Sbjct: 264 PSFRTILRDL 273
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VY K + +AVK + ++FL EA + QL + + L+G C+G+ +LV
Sbjct: 15 VYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIG-VCKGEPLMLV 73
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E P L K+L + + + + +A +A + Y SK ++ DL A ++ +
Sbjct: 74 MELAPLGPLLKYLK--KRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVN 130
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
++S FG+ + G Y L + PE + G+ + +S ++S+G L +
Sbjct: 131 RHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWE 190
Query: 245 LLS 247
S
Sbjct: 191 AFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 51/226 (22%), Positives = 87/226 (38%), Gaps = 26/226 (11%)
Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 159
FL+EA + L + L L G ++V E P +L L +
Sbjct: 43 FLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCD 101
Query: 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---- 215
A+ IA + Y SK R ++ DL A I+ D ++ FGLM+ +
Sbjct: 102 YAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL 160
Query: 216 ---LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-----GKHIPPSHALDLIRDRNIQT 267
A+ PE LRT + S ++ FG L ++ + + S L I D+ +
Sbjct: 161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI-DKEGER 219
Query: 268 LT--DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311
L ++C + ++ + +C + P +RP +L L
Sbjct: 220 LERPEACPQ---------DIYNVMLQCWAHNPADRPTFAALREFLP 256
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 52/273 (19%)
Query: 64 EHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLA 116
E GE A V+ + N + +AVK + A ARQ F EA + L+++ +
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTVLQHQHIV 70
Query: 117 NLLGCCCEGDERLLVAEYMPNDTL----------AKHLFHWETQP---MKWAMRLRVALH 163
G C EG L+V EYM + L AK L E + L +A
Sbjct: 71 RFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQ 130
Query: 164 IAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------- 215
IA + Y S ++ DL + + ++ FG+ SRD YST+
Sbjct: 131 IASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGGRT 184
Query: 216 ---LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQT 267
+ + PPE + + T ES ++SFG +L ++ + GK + + A++ I
Sbjct: 185 MLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELE 244
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+C E+ + C Q EP++R
Sbjct: 245 RPRTC---------PPEVYAIMQGCWQREPQQR 268
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 5e-06
Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 37/253 (14%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--- 157
+E + +G+ +N + NLLG C + ++ EY L ++L M ++
Sbjct: 68 MEMMKMIGKHKN--IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125
Query: 158 -----------LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
+ A +A +EY S+ + ++ DL A ++ +D +++ FGL ++
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184
Query: 207 RDGRSY--STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSH 255
+ Y +TN + + PE L T +S ++SFG LL ++ + IP
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244
Query: 256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315
L+++ + +C EL + C P +RP + LV L +
Sbjct: 245 LFKLLKEGHRMDKPANCTH---------ELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295
Query: 316 DTEVPSHVLMGIP 328
T ++ + +P
Sbjct: 296 VTSTDEYLDLSVP 308
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 42/250 (16%)
Query: 84 IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVK S D FL EA + + ++ + L+G E R ++ E M L
Sbjct: 39 VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS 98
Query: 143 HLFHWE---TQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
L +P M+ L A +A+ +Y ++ D+ A + L
Sbjct: 99 FLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCL--------L 149
Query: 198 SC-----------FGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGT 240
+C FG+ ++ Y + + PPE G T ++ ++SFG
Sbjct: 150 TCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGV 209
Query: 241 LLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG--TELVRLASRCLQYEP 297
LL ++ S ++P P N + + G+ +G + R+ + C Q+ P
Sbjct: 210 LLWEIFSLGYMPYPGR-------TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTP 262
Query: 298 RERPNPRSLV 307
+RPN +++
Sbjct: 263 EDRPNFATIL 272
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 23/249 (9%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VY + +AVK P R+ FL+EA + Q + + L+G E + +V
Sbjct: 26 VYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E P L +L + A + + ++ AL Y SK R ++ D+ A ++
Sbjct: 85 MELAPLGELRSYL-QVNKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSS 142
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PEYLRTGRVTPESVMYSFGTLLLDLL 246
+L FGL + D Y + P PE + R T S ++ FG + ++L
Sbjct: 143 PDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202
Query: 247 S-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
G + + + I + + +C L L ++C Y+P +RP
Sbjct: 203 MLGVKPFQGVKNNDVIGRIENGERLPMPPNC---------PPTLYSLMTKCWAYDPSKRP 253
Query: 302 NPRSLVTAL 310
L L
Sbjct: 254 RFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 9e-06
Identities = 59/266 (22%), Positives = 100/266 (37%), Gaps = 27/266 (10%)
Query: 60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLAN 117
++ G A VVY L N ++A+KR + + +E +A+ Q + +
Sbjct: 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK 63
Query: 118 LLGCCCEGDERLLVAEYMPNDTLA---KHLFHWETQPMKW-AMRLRVALHIAEALEYCTS 173
GDE LV Y+ +L K + A L+ L + LEY S
Sbjct: 64 YYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVL---KGLEYLHS 120
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFG----LMKNSRDGRSYSTNLAFTP----PEYLR 225
+ ++ D+ A I+ +D + +++ FG L R TP PE +
Sbjct: 121 NGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVME 179
Query: 226 TGRVTPESV-MYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280
++SFG ++L +G PP L L + +L ++S
Sbjct: 180 QVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSK- 238
Query: 281 EGTELVRLASRCLQYEPRERPNPRSL 306
++ S CLQ +P +RP L
Sbjct: 239 ---SFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 16/223 (7%)
Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-------HWETQPM 152
F E +L ++ + LLG C E + ++ EY L + L + P+
Sbjct: 55 FRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114
Query: 153 KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
++ + IA +++ S R ++ DL A + ++S L K+ + Y
Sbjct: 115 STKQKVALCTQIALGMDH-LSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173
Query: 213 STN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 267
L + PE ++ + +S ++SFG L+ ++ + +P L + +
Sbjct: 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY---GLSDEEVLNR 230
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
L LE + L +L +RC P++RP+ LV+AL
Sbjct: 231 LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 27/201 (13%)
Query: 64 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLAN 117
E GE V +G+L+ + +A+K +S + + R FL EA +GQ + + +
Sbjct: 16 EFGE-----VCRGRLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNIIH 69
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMRLRVALHIAEALEYCTSKE 175
L G + +++ E+M N L L + Q ++ LR IA ++Y S+
Sbjct: 70 LEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKY-LSEM 125
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---YSTNLA------FTPPEYLRT 226
++ DL A I+ + ++ ++S FGL + D S Y+++L +T PE +
Sbjct: 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY 185
Query: 227 GRVTPESVMYSFGTLLLDLLS 247
+ T S ++S+G ++ +++S
Sbjct: 186 RKFTSASDVWSYGIVMWEVMS 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 5e-05
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 19/243 (7%)
Query: 73 VYKGKLENQFR--IAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
VYKG ++N+ + +A+K + A + +E + Q + + G +G +
Sbjct: 20 VYKG-IDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLW 78
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
++ EY+ + L + P++ + I + L+Y S ER ++ D+ A ++
Sbjct: 79 IIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLL 134
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
+ + +L+ FG+ D + TP PE ++ ++ ++S G ++L
Sbjct: 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194
Query: 246 LSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
G+ PP+ L +R I + LEGQ+S CL +PR RP +
Sbjct: 195 AKGE--PPNSDLHPMRVLFLIPKNSPPTLEGQYSK----PFKEFVEACLNKDPRFRPTAK 248
Query: 305 SLV 307
L+
Sbjct: 249 ELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 7e-05
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 84 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVK A +AR FL+E + + +L++ + LL C D ++ EYM N L +
Sbjct: 49 VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108
Query: 143 HLFHWETQP---------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193
L E Q + ++ + +A IA ++Y +S ++ DL + +
Sbjct: 109 FLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNY 167
Query: 194 NPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLLLDLLS 247
+++ FG+ +N G Y P E + G+ T S +++FG L ++L+
Sbjct: 168 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
Query: 248 -GKHIPPSHALD---------LIRDRNIQT 267
K P S D RD+ Q
Sbjct: 228 LCKEQPYSQLSDEQVIENTGEFFRDQGRQV 257
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 10/174 (5%)
Query: 84 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
+A+K+ N P + E + +L+N + N L GDE +V EY+ +L
Sbjct: 47 VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV 106
Query: 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203
+ + A R L +ALE+ + + ++ D+ + ++ D + +L+ FG
Sbjct: 107 VTETCMDEAQIAAVCRECL---QALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFC 162
Query: 204 KNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
+S + + TP PE + P+ ++S G + ++++ G+ PP
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 16/228 (7%)
Query: 77 KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYM 135
KLE + RI KR S + +Q LE+ N R L E + L LV M
Sbjct: 32 KLEKK-RIK-KRKGESMALNEKQILEKV-------NSRFVVSLAYAYETKDALCLVLTLM 82
Query: 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195
L H++H + + A I LE +ER +Y DL I+ DD +
Sbjct: 83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED-LHQERIVYRDLKPENILLDDHGHI 141
Query: 196 RLSCFGLMKNSRDGRSYS---TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
R+S GL + +G++ + + PE ++ R T ++ G LL ++++G+ P
Sbjct: 142 RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS-P 200
Query: 253 PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
I+ ++ L E ++S + L L +P+ER
Sbjct: 201 FQQRKKKIKREEVERLVKEVQE-EYSEKFSPDARSLCKMLLCKDPKER 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|215568 PLN03088, PLN03088, SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 446
K AF DF +++ YTQ ID+ + +A R+ + + EA+ DA++A +
Sbjct: 7 DKAKEAFVDDDFALAVDLYTQAIDLDP-NNAELYADRAQANIKLGNFTEAVADANKAIEL 65
Query: 447 SPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
P A + A L + A+AAL + + L
Sbjct: 66 DPSLAKAYLRKGTACMKLEEYQTAKAALEKGASLA 100
|
Length = 356 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 40/246 (16%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL---------FHWET-- 149
+E + +G+ +N + NLLG C + ++ EY L ++L + ++
Sbjct: 71 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128
Query: 150 ---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-- 204
+ M + + +A +EY S ++ ++ DL A ++ ++ +++ FGL +
Sbjct: 129 VPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDV 187
Query: 205 NSRDGRSYSTN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGK---HIPPSH 255
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 188 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247
Query: 256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL---VT 312
L+++ + +C EL + C P RP + LV L +T
Sbjct: 248 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298
Query: 313 LQKDTE 318
L + E
Sbjct: 299 LTTNEE 304
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 30/247 (12%)
Query: 84 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMP----N 137
+AVK+ S R F E + L++ + G C R LV EY+P
Sbjct: 36 VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95
Query: 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
D L KH + + + L A I + +EY SK R ++ DL I+ + + ++
Sbjct: 96 DYLQKHRERLDHRKL-----LLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKI 149
Query: 198 SCFGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH 250
FGL K + Y + + PE L + + S ++SFG +L +L +
Sbjct: 150 GDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD 209
Query: 251 I---PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRE 299
PP+ + ++ D+ Q + +E G+ + G E+ + C +P +
Sbjct: 210 KSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269
Query: 300 RPNPRSL 306
RP+ L
Sbjct: 270 RPSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 37/235 (15%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------------FH 146
+E + +G+ +N + NLLG C + ++ EY L ++L
Sbjct: 74 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131
Query: 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
+ + + + A +A +EY SK + ++ DL A ++ +D +++ FGL ++
Sbjct: 132 VPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 190
Query: 207 R--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGK---HIPPSH 255
D +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 191 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250
Query: 256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
L+++ + +C EL + C P +RP + LV L
Sbjct: 251 LFKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 1e-04
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYL-MSDMPQEALNDASQAQ 444
K G+ F+ D+ +IE Y + +++ + A+ +L+YL + +EAL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 445 VISP 448
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 41/200 (20%)
Query: 73 VYKG-----KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
VYKG + + +A+K P A + L+EA + + + + LLG C
Sbjct: 23 VYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-SS 81
Query: 127 ERLLVAEYMP-----------NDTL-AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK 174
+ L+ + MP D + +++L +W Q IA+ + Y +
Sbjct: 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ-------------IAKGMSYL--E 126
Query: 175 ERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTP-----PEYLRTG 227
E+ L H DL A ++ + +++ FGL K D + Y P E +
Sbjct: 127 EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHR 186
Query: 228 RVTPESVMYSFGTLLLDLLS 247
T +S ++S+G + +L++
Sbjct: 187 IYTHKSDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 66 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 119
G A VYKG + +A+K N + P A +F++EA + + + L LL
Sbjct: 16 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 75
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
G C + LV + MP+ L ++ H + + L + IA+ + Y +ER L
Sbjct: 76 GVCLSPTIQ-LVTQLMPHGCLLDYV-HEHKDNIGSQLLLNWCVQIAKGMMYL--EERRLV 131
Query: 180 H-DLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPE 232
H DL A ++ + +++ FGL + D + Y+ + P +++ + T +
Sbjct: 132 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 191
Query: 233 SVMYSFGTLLLDLLS 247
S ++S+G + +L++
Sbjct: 192 SDVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 98 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT----LAKHLFHWETQPMK 153
R FL EA +GQ + + +L G + ++V EYM N + L KH + +
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV 109
Query: 154 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 211
+R IA ++Y S ++ DL A I+ + ++ ++S FGL + D +
Sbjct: 110 GMLR-----GIASGMKY-LSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163
Query: 212 YSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
Y+T + +T PE + + T S ++S+G ++ +++S
Sbjct: 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 159 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSYSTN 215
++A+ + E L Y + R ++ D+ I+ + +L FG+ + NS T+
Sbjct: 107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTS 166
Query: 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK------------HIPPSHALDLIRDR 263
+ PE ++ G+ T +S ++S G +++L GK P LDL++ +
Sbjct: 167 -TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQ-Q 224
Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307
+Q F D L CL +P ERP P+ L
Sbjct: 225 IVQEPPPRLPSSDFPED----LRDFVDACLLKDPTERPTPQQLC 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 50/209 (23%), Positives = 79/209 (37%), Gaps = 44/209 (21%)
Query: 130 LVAEYMPND---TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
+V EYM +D L + +K M+ + E L+Y S L+ D+
Sbjct: 77 MVFEYMDHDLTGLLDSPEVKFTESQIKCYMK-----QLLEGLQYLHSN-GILHRDIKGSN 130
Query: 187 IVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFT----PPEYLRTG--RVTPESVMYSF 238
I+ ++D +L+ FGL + R+ Y TN T PPE L G R PE M+S
Sbjct: 131 ILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLWYRPPELL-LGATRYGPEVDMWSV 188
Query: 239 GTLLLDLLSGKHIPP----SHALDLIRD-------------------RNIQ--TLTDSCL 273
G +L +L GK I L+ I + N++ L
Sbjct: 189 GCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRL 248
Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERPN 302
F + L + L +P++R +
Sbjct: 249 REFFKHLIDPSALDLLDKLLTLDPKKRIS 277
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 35/225 (15%)
Query: 111 RNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAM 156
+++ + NLLG C + ++ EY L + L + + +
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 157 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--ST 214
+ A +A +EY S+ R ++ DL A ++ +D +++ FGL + D Y ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 215 N----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGKH---IPPSHALDLIRDRNI 265
N + + PE L T +S ++SFG L+ ++ L G IP L+R+ +
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR 254
Query: 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
+C EL L C P +RP + LV AL
Sbjct: 255 MDKPSNCTH---------ELYMLMRECWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 4e-04
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 34/231 (14%)
Query: 110 LRNRRLANLL---GCCCEGDER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHI 164
LRN N++ G C E L+ E++P+ +L ++L + +L+ A+ I
Sbjct: 60 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQI 118
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST-------NLA 217
+ ++Y S++ ++ DL A ++ + + ++ FGL K + Y T +
Sbjct: 119 CKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVF 177
Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSG------------KHIPPSHALDLIRDRNI 265
+ PE L + S ++SFG L +LL+ K I P+H + R +
Sbjct: 178 WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHG-QMTVTRLV 236
Query: 266 QTLTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313
+ L EG+ + E+ +L +C +++P +R ++L+ +
Sbjct: 237 RVLE----EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 5e-04
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
GDE +V EY+ +L + + A R L +ALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGKHIPP 253
+ ++++ G+ PP
Sbjct: 205 MAIEMIEGE--PP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 6e-04
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
G+ A VY + +A+K+ N P + E + + +N + N L
Sbjct: 28 GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 87
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
GDE +V EY+ +L + + A R L +AL++ S + ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALDFLHSNQ-VIHRDIKS 143
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 241 LLLDLLSGKHIPP 253
+ ++++ G+ PP
Sbjct: 204 MAIEMVEGE--PP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 6e-04
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 126 DERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
D LV ++ L H+ + E +WA + VAL +AL +E + D
Sbjct: 58 DSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVAL---DALH----REGIVCRD 110
Query: 182 LNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSF 238
LN I+ DD + +L+ F +++S DG + + PE T +S
Sbjct: 111 LNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVEN--MYCAPEVGGISEETEACDWWSL 168
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
G +L +LL+GK + H I T T + ++ S+E L+ + LQ+ P
Sbjct: 169 GAILFELLTGKTLVECHP------SGINTHTTLNIP-EWVSEEARSLL---QQLLQFNPT 218
Query: 299 ER 300
ER
Sbjct: 219 ER 220
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 20/247 (8%)
Query: 76 GKLENQFRIAVKRFNRSAWPDARQFL-EEARAVGQLRNR-RLANLLGCCCEGDERLLVAE 133
K + ++AVK +A R+ L E + + L N + NLLG C G L++ E
Sbjct: 60 SKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE 119
Query: 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193
Y L L + L + +A+ + + SK ++ DL A ++
Sbjct: 120 YCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGK 178
Query: 194 NPRLSCFGLMKNSRDGRSY-STNLAFTP-----PEYLRTGRVTPESVMYSFGTLLLDLLS 247
++ FGL ++ + +Y A P PE + T ES ++S+G LL ++ S
Sbjct: 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238
Query: 248 -GKHIPPSHALDLIRDRNIQTLTDS---CLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303
G + P + D L + + + E ++++ C +P +RP
Sbjct: 239 LGSNPYP----GMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMK---TCWDADPLKRPTF 291
Query: 304 RSLVTAL 310
+ +V +
Sbjct: 292 KQIVQLI 298
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 30/210 (14%)
Query: 83 RIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141
R+ VK SA PD + FL+E + +L + + LG C E LLV E+ P L
Sbjct: 24 RVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLK 83
Query: 142 KHL------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195
+L Q + R+A +A L + + ++ DL D++
Sbjct: 84 NYLRSNRGMVAQMAQKD---VLQRMACEVASGLLW-LHQADFIHSDLALRNCQLTADLSV 139
Query: 196 RLSCFGLMKNSRDGRSYSTN------LAFTPPEY-------LRTGRVTPESVMYSFGTLL 242
++ +GL Y T L + PE L T +S ++S G +
Sbjct: 140 KIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM 199
Query: 243 LDLLSGKHIPPSHALDL------IRDRNIQ 266
+L + P D +R+++I+
Sbjct: 200 WELFTAADQPYPDLSDEQVLKQVVREQDIK 229
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 26/202 (12%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
+VY + L Q RIA+K + EE L++R + LG E +
Sbjct: 23 IVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82
Query: 131 VAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYRIV 188
E +P +L+ L W + I E L+Y HD +R +
Sbjct: 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKY--------LHDNQIVHRDI 134
Query: 189 FDDDV--NP-----RLSCFGLMKN----SRDGRSYSTNLAFTPPEYLRTGR--VTPESVM 235
D+V N ++S FG K + +++ L + PE + G + +
Sbjct: 135 KGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADI 194
Query: 236 YSFGTLLLDLLSGKHIPPSHAL 257
+S G ++++ +GK PP L
Sbjct: 195 WSLGCTIVEMATGK--PPFIEL 214
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 42/283 (14%)
Query: 62 VSEHGEKAPNVVYKGKL------ENQFRIAVKRF-NRSAWPDARQFLEEARAVGQLRNRR 114
+ E GE VYKG L E +A+K +++ P +F EA +L++
Sbjct: 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPN 69
Query: 115 LANLLGCCCEGDERLLVAEYMPNDTLAKHLF----HWET------QPMKWAMR----LRV 160
+ LLG + ++ Y + L + L H + + +K + + +
Sbjct: 70 IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHI 129
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST------ 214
IA +E+ +S ++ DL ++ D +N ++S GL + Y
Sbjct: 130 VTQIAAGMEFLSS-HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLL 188
Query: 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLT 269
+ + PE + G+ + +S ++S+G +L ++ S P +++IR+R +
Sbjct: 189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP 248
Query: 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312
D C + L C P RP + + + L T
Sbjct: 249 DDC---------PAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 6/174 (3%)
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
LV M L H+++ A + A I LE+ + R +Y DL ++
Sbjct: 70 LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEH-LHQRRIVYRDLKPENVLL 128
Query: 190 DDDVNPRLSCFGL---MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
DD N R+S GL +K + + + + PE L+ ++ G L +++
Sbjct: 129 DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI 188
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+G P + + ++ T + ++ E L LQ +P +R
Sbjct: 189 AG-RSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM--------------PNDTLAKHLFH 146
+E + +G+ +N + NLLG C + +V EY P + +
Sbjct: 66 MEMMKMIGKHKN--IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123
Query: 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
+ + + A +A +E+ SK + ++ DL A ++ +D +++ FGL ++
Sbjct: 124 PPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182
Query: 207 RDGRSY--STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGKHIP--PSHA 256
Y +TN + + PE L T +S ++SFG LL ++ L G P P
Sbjct: 183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242
Query: 257 L-DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
L L+++ +C + EL L C P +RP + LV L
Sbjct: 243 LFKLLKEGYRMEKPQNCTQ---------ELYHLMRDCWHEVPSQRPTFKQLVEDL 288
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 19/263 (7%)
Query: 66 GEKAPNVVYKGKL----EN-QFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
G A VYKG EN + +A+K + P A ++ L+EA + + + + LL
Sbjct: 16 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLL 75
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
G C +L V + MP L ++ + + + L + IA+ + Y + R ++
Sbjct: 76 GICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDL-LNWCVQIAKGMSY-LEEVRLVH 132
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTG-----RVTPES 233
DL A ++ + +++ FGL + D Y + P +++ R T +S
Sbjct: 133 RDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQS 192
Query: 234 VMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
++S+G + +L++ P D I R I L + ++ + +C
Sbjct: 193 DVWSYGVTVWELMTFGAKP----YDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCW 248
Query: 294 QYEPRERPNPRSLVTALVTLQKD 316
+ RP R LV + +D
Sbjct: 249 MIDSECRPRFRELVDEFSRMARD 271
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|223533 COG0457, NrfG, FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.8 bits (91), Expect = 0.002
Identities = 27/136 (19%), Positives = 47/136 (34%)
Query: 353 EILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVG 412
L +LG ++ E + ++ + G + + ++E + + +
Sbjct: 138 GALYELGDYEEALELYEKALELDPELNELAEALLALGALLEALGRYEEALELLEKALKLN 197
Query: 413 TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQA 472
A L YL +EAL +A + P A Y A L LG+ EA
Sbjct: 198 PDDDAEALLNLGLLYLKLGKYEEALEYYEKALELDPDNAEALYNLALLLLELGRYEEALE 257
Query: 473 ALREASILENKKSANA 488
AL +A L+
Sbjct: 258 ALEKALELDPDLYNLG 273
|
Length = 291 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 34/186 (18%)
Query: 103 EARAVGQLRNRRLANLLGCCCEGDERLL--VAEYMPNDTLAKHLFHWETQPMKWAMRLRV 160
E R + ++ + + L E D+R L + EY+P L +L + + L
Sbjct: 51 EKRVLKEVSHPFIIRLF--WTEHDQRFLYMLMEYVPGGELFSYLRNSGR--FSNSTGLFY 106
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP 220
A I ALEY SKE +Y DL I+ D + + +L+ FG K RD R+++ L T
Sbjct: 107 ASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT- 161
Query: 221 PEYLRTGRVTPESVM----------YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD 270
PEYL PE + ++ G L+ ++L G PP D N + +
Sbjct: 162 PEYL-----APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYE 208
Query: 271 SCLEGQ 276
L G+
Sbjct: 209 KILAGK 214
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
G+ A VY + +A+K+ N P + E + + ++ + N L
Sbjct: 28 GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV 87
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
GDE +V EY+ +L + ET M V +ALE+ S + ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVT--ETC-MDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKS 143
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 241 LLLDLLSGKHIPP 253
+ ++++ G+ PP
Sbjct: 204 MAIEMVEGE--PP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEY 223
LEY S + ++ D+ A I+ +++ +L+ FG+ D + + TP PE
Sbjct: 112 LEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEV 170
Query: 224 LRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279
++ ++ ++S G +++ GK I P A+ +I ++ TL+D ++S
Sbjct: 171 IQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP---EKWS- 226
Query: 280 DEGTELVRLASRCLQYEPRERPNPRSL 306
E +CL +P ERP+ L
Sbjct: 227 ---PEFNDFVKKCLVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.004
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 96 DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKW 154
D + E R + RN L CC + +RL V E++ L +FH +
Sbjct: 38 DVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFD 94
Query: 155 AMRLRV-ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDGRSY 212
R R A I AL + K +Y DL ++ D + + +L+ FG+ K +G++
Sbjct: 95 EARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153
Query: 213 STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
ST TP PE L+ P ++ G LL ++L G H P
Sbjct: 154 ST-FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.004
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 49/252 (19%)
Query: 84 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVK A +AR+ FL+E + + +L + +A LLG C ++ EYM N L +
Sbjct: 49 VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108
Query: 143 HLFHWETQPMKWAMRLR---------VALHIAEALEYCTSKERALYH-DLNAYRIVFDDD 192
L + A + +A IA + Y S H DL + +
Sbjct: 109 FLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHRDLATRNCLVGKN 166
Query: 193 VNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLR--------TGRVTPESVMYSFGTLLLD 244
+++ FG M + Y + P +R G+ T +S +++FG L +
Sbjct: 167 YTIKIADFG-MSRNLYSSDYY-RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWE 224
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTD-SCLE--GQFSSDEGT------------ELVRLA 289
+L+ L R++ + LTD +E G F D+G ++ L
Sbjct: 225 ILT-----------LCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELM 273
Query: 290 SRCLQYEPRERP 301
C + + +RP
Sbjct: 274 LECWRRDEEDRP 285
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.004
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 23/199 (11%)
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
+V + G +Y K+ + I K RQ LE R R L L
Sbjct: 18 LVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-----RCPFLVTLH- 71
Query: 121 CCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSKER 176
+ D +L L+ +Y+ L HL+ E V ++IAE AL+ +
Sbjct: 72 YAFQTDTKLHLILDYVNGGELFTHLYQREHFTES-----EVRVYIAEIVLALD-HLHQLG 125
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMK-----NSRDGRSYSTNLAFTPPEYLRTGRVTP 231
+Y D+ I+ D + + L+ FGL K S+ + + PE +R G
Sbjct: 126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGH 185
Query: 232 ESVM--YSFGTLLLDLLSG 248
+ + +S G L +LL+G
Sbjct: 186 DKAVDWWSLGVLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 488 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.98 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.98 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.98 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.97 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.94 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.92 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.92 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.91 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.9 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.89 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.88 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.88 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.86 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.85 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.85 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.85 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.84 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.84 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.81 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.81 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.8 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.8 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.79 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.78 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.77 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.77 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.76 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.71 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.7 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.7 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.69 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.64 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.63 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.6 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.59 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.57 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.56 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.56 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.56 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.55 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.54 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.53 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.51 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.5 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.49 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.47 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.47 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.45 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.44 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.43 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.43 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.41 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.4 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.39 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.38 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.33 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.33 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.33 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.32 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.31 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.3 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.29 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.29 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.28 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.28 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.28 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.28 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.28 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.27 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.27 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.25 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.25 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.25 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.24 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.23 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.23 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.22 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.22 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.22 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.21 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.19 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.18 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.15 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.15 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.14 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.13 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.13 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.13 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.11 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.1 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.1 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.1 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 99.09 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.07 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.07 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.07 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-53 Score=411.07 Aligned_cols=274 Identities=35% Similarity=0.621 Sum_probs=237.4
Q ss_pred cccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEE
Q 011353 40 VFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119 (488)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 119 (488)
..+.|++.++..+|++|+..+++ |+|+||.||+|...++..||||++........++|.+|+.++.+++|||+|+|+
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 56779999999999999999988 999999999999989899999998866533145699999999999999999999
Q ss_pred EEEeeCC-eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--CcccccccCcceeeCCCCCee
Q 011353 120 GCCCEGD-ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE--RALYHDLNAYRIVFDDDVNPR 196 (488)
Q Consensus 120 ~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--~iiH~Dlkp~Nill~~~~~~k 196 (488)
|||.+.+ +.+||+|||++|||.++|+.....+++|.+|++|+.++|+||+|||... .||||||||+|||+|+++++|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999998 5999999999999999998643338999999999999999999999973 499999999999999999999
Q ss_pred eecCCCccccCC-CCcc----ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCch-----------hhHHH
Q 011353 197 LSCFGLMKNSRD-GRSY----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-----------ALDLI 260 (488)
Q Consensus 197 l~DfGla~~~~~-~~~~----~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~-----------~~~~~ 260 (488)
|+|||+|+.... .... .||.+|++||++..+..+.|+|||||||+|+||+||+.+.... ....+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999987664 3322 7899999999999999999999999999999999999655421 12334
Q ss_pred hhcccccccccccc-CCCCh-HHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 261 RDRNIQTLTDSCLE-GQFSS-DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 261 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.......++|+.+. +.++. .....+..++..|++.+|..||+|.+|++.|+.+...
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 45577888888876 55554 5677799999999999999999999999999766544
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-53 Score=388.59 Aligned_cols=250 Identities=17% Similarity=0.242 Sum_probs=209.6
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe-eEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-RLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~E 133 (488)
++.+.++.||+|..|+|||+. ..+++.+|+|++..... ...+++.+|+++++.++|||||.++|.|...+. +.|+||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 356677889999999999999 56789999999965433 346789999999999999999999999999994 999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--Cc
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 211 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~ 211 (488)
||++|||++++.. .+.+++...-+|+.+|++||.|||+..+||||||||+|||++..|.+||+|||.++...+. .+
T Consensus 159 YMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t 236 (364)
T KOG0581|consen 159 YMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT 236 (364)
T ss_pred hcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence 9999999999965 3569999999999999999999996349999999999999999999999999998876544 56
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-ccccccccccCCCChH-HHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSD-EGTELVRLA 289 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~l~~li 289 (488)
..||..|||||-+.+..|+.++||||||++++|+.+|+.|++........... +..+.+ ......|.. +++++++|+
T Consensus 237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~-~ppP~lP~~~fS~ef~~FV 315 (364)
T KOG0581|consen 237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD-EPPPRLPEGEFSPEFRSFV 315 (364)
T ss_pred ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc-CCCCCCCcccCCHHHHHHH
Confidence 78999999999999999999999999999999999999887653100000000 111111 112234444 789999999
Q ss_pred HHhccCCCCCCCChHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~ 309 (488)
..||++||.+|||+.++++|
T Consensus 316 ~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 316 SCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHhcCCcccCCCHHHHhcC
Confidence 99999999999999999998
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-51 Score=392.54 Aligned_cols=253 Identities=27% Similarity=0.398 Sum_probs=213.7
Q ss_pred cccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCcc--HHHHHHHHHHHhccCCCCcccEEEEEeeCC-eeEEEEecCC
Q 011353 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLVAEYMP 136 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~E~~~ 136 (488)
.+...+|.|+||+||+|.+.+...||||++....... .+.|.+|+.+|.+++|||||+++|+|.+.. ..+|||||++
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3444579999999999999766569999998654333 458999999999999999999999999887 7999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-cccccccCcceeeCCCC-CeeeecCCCccccCC----CC
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-ALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD----GR 210 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-iiH~Dlkp~Nill~~~~-~~kl~DfGla~~~~~----~~ 210 (488)
+|+|.+++.......+++..+++|+.||++||.|||++ + ||||||||+|||++.++ ++||+|||+++.... .+
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~ 202 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMT 202 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCeeecccChhhEEEcCCCCEEEECCCccceeecccccccc
Confidence 99999999764456799999999999999999999999 8 99999999999999997 999999999986543 23
Q ss_pred ccccCCCCCCccccc--cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLR--TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
...||+.|||||++. ...++.|+|||||||+||||+||+.||.....-.... .+.....+..++..+++.+..+
T Consensus 203 ~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~----~v~~~~~Rp~~p~~~~~~l~~l 278 (362)
T KOG0192|consen 203 SVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVAS----AVVVGGLRPPIPKECPPHLSSL 278 (362)
T ss_pred CCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHH----HHHhcCCCCCCCccCCHHHHHH
Confidence 468899999999999 5689999999999999999999999887653321111 1222223334455577899999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 289 ASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
|..||..||..||++.+++..|+.+....
T Consensus 279 ~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 279 MERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred HHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999887644
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-50 Score=371.80 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=207.6
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC--CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..+|.+.++||+|+||+||+|. ..++..||||.+.+. .....+.+..|+.+|+.++|||||++++++.+++.+++||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 4577788889999999999999 566899999999876 3334666899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC------CCeeeecCCCcccc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD------VNPRLSCFGLMKNS 206 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~------~~~kl~DfGla~~~ 206 (488)
|||.||+|.++|+. .+.+++..+..++.||+.||++||++ +||||||||.||||+.. -.+||+|||+|+..
T Consensus 89 EyC~gGDLs~yi~~--~~~l~e~t~r~Fm~QLA~alq~L~~~-~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRR--RGRLPEATARHFMQQLASALQFLHEN-NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 99999999999986 44699999999999999999999999 99999999999999754 45899999999988
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
..+ .+.+|++.|||||++..+.|+.|+|+||+|++||++++|+.||.............. ........+...+.
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k---~~~~~~~~~~~~s~ 242 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKK---GNEIVPVLPAELSN 242 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc---cccccCchhhhccC
Confidence 776 356899999999999999999999999999999999999999886544433321110 01111223334455
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+++...++.+|.+|.++.+-..+
T Consensus 243 ~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 243 PLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred chhhhhhHHHhcCccccCchHHhhhh
Confidence 67788899999999999887776655
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-51 Score=360.20 Aligned_cols=251 Identities=19% Similarity=0.245 Sum_probs=210.6
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEE-EEeeCCe-eEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLG-CCCEGDE-RLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~-~~~~~~~-~~lv 131 (488)
.+|.++++||+|+||+||++. ..+|..||.|.++-.... ..+....|+.+|++|+|||||++++ -|.+.+. ++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 467888999999999999999 789999999999854332 3456899999999999999999998 4555555 8999
Q ss_pred EecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcC-CC--cccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 132 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK-ER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~--iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
||||.+|+|...+++. .++.+++..+|+++.|++.||..+|++ .+ |+||||||.||+|+.+|.+||+|||+++..
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999999999753 345699999999999999999999993 14 899999999999999999999999999988
Q ss_pred CCC----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC-hHH
Q 011353 207 RDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDE 281 (488)
Q Consensus 207 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 281 (488)
... .+.+|||.||+||.+.+.+|+.+|||||+||++|||+.-++||.+.....+....-+. -.+..| ...
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-----d~~~~p~~~Y 253 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-----DYPPLPDEHY 253 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-----CCCCCcHHHh
Confidence 765 3578999999999999999999999999999999999999999887544333222221 111123 557
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHHHHh
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 312 (488)
+.++..||..|+..||+.||+...++..+..
T Consensus 254 S~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 254 STDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred hhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 8999999999999999999997666655443
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-50 Score=385.62 Aligned_cols=251 Identities=27% Similarity=0.422 Sum_probs=213.3
Q ss_pred ccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
..++++||+|-||.||.|.+++...||+|.++... -..+.|.+|+++|++|+|+|||+++|+|..++.++||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 45778999999999999999888899999998764 34567999999999999999999999999988999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCccc-----
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS----- 213 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~----- 213 (488)
+|.++|+...+..+...+.+.++.|||.||+||+++ ++|||||.+.|||++++..+||+|||||+...+.....
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~-~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~k 365 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK-NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGK 365 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC-CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCC
Confidence 999999876677799999999999999999999999 99999999999999999999999999999655442221
Q ss_pred cCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 214 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
-.+.|+|||.+..+.++.+||||||||+||||+| |+.|++....... ...++...+-.-|..++.++.++|..|
T Consensus 366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev-----~~~le~GyRlp~P~~CP~~vY~lM~~C 440 (468)
T KOG0197|consen 366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV-----LELLERGYRLPRPEGCPDEVYELMKSC 440 (468)
T ss_pred CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH-----HHHHhccCcCCCCCCCCHHHHHHHHHH
Confidence 1467999999999999999999999999999999 5555454322211 222222223334566889999999999
Q ss_pred ccCCCCCCCChHHHHHHHHhhhcC
Q 011353 293 LQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 293 l~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
|..+|++|||+..+...|+.+...
T Consensus 441 W~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 441 WHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred hhCCcccCCCHHHHHHHHHHhhhc
Confidence 999999999999999998887654
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-50 Score=372.94 Aligned_cols=248 Identities=17% Similarity=0.231 Sum_probs=204.8
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc-------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-------DARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
+.|-+.+.||.|+||.|-+|. ..+|+.||||++++.... ......+|+++|++|+|||||+++++|+..+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 445666889999999999999 678999999999764221 223467999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC---CCeeeecCCCccc
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKN 205 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~DfGla~~ 205 (488)
||||||+.||+|.+.+.. ++.+.+..-..+++|++.|+.|||+. ||+||||||+|||++.+ ..+||+|||+|+.
T Consensus 252 YmVlE~v~GGeLfd~vv~--nk~l~ed~~K~~f~Qll~avkYLH~~-GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVA--NKYLREDLGKLLFKQLLTAVKYLHSQ-GIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred EEEEEEecCccHHHHHHh--ccccccchhHHHHHHHHHHHHHHHHc-CcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 999999999999999975 44578888899999999999999999 99999999999999765 7799999999998
Q ss_pred cCCC---CccccCCCCCCccccccCC---CCCCccchhhHHHHHHHHhCCCCCCchhhHH-HhhccccccccccccCCCC
Q 011353 206 SRDG---RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 206 ~~~~---~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 278 (488)
.... .+.+||+.|.|||++.+.. +..++|+||+||+||-++||.+||.++..+. ..+......... .+...
T Consensus 329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f--~p~~w 406 (475)
T KOG0615|consen 329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAF--GPLQW 406 (475)
T ss_pred cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccc--cChhh
Confidence 7654 4678999999999998755 3347899999999999999999987654332 222111111110 11122
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+++..+||.+||..||++|||+.++++|
T Consensus 407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 407 DRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred hhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 4578899999999999999999999999998
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-49 Score=384.02 Aligned_cols=244 Identities=17% Similarity=0.218 Sum_probs=212.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..|..-+.||+|+|.+||.++. .+|..||+|++.+... ...+...+||++.++|+|||||+++++|++.+++|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 3566667779999999999995 8899999999976422 23567899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~---- 208 (488)
|+|+.++|..++++ ++++++..+..++.||+.||.|||+. +|||||||-.|++++++.++||+|||||.....
T Consensus 98 ELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~-~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSL-GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhc-CceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 99999999999974 56799999999999999999999999 999999999999999999999999999987653
Q ss_pred CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 209 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
..+.+|||.|+|||++.....+..+||||+|||||-|++|++||.............. ..-.+|...+.++.+|
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~------~~Y~~P~~ls~~A~dL 248 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL------NEYSMPSHLSAEAKDL 248 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh------cCcccccccCHHHHHH
Confidence 2567899999999999999999999999999999999999999876644332222111 1123455678899999
Q ss_pred HHHhccCCCCCCCChHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~ 309 (488)
|.++|+.||.+|||+.+|+.+
T Consensus 249 I~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 249 IRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999988
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-49 Score=362.43 Aligned_cols=238 Identities=20% Similarity=0.242 Sum_probs=205.0
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..++++++.||+|+||.||.++ .++++.+|+|++++.... ..+....|..+|..++||+||.++-.|++...+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 4566788888999999999999 567899999999865432 355688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC---
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 208 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~--- 208 (488)
+||+.||.|..+|.+ .+.+++..+..++.+|+.||.|||++ |||||||||+|||+|.+|+++|+||||++....
T Consensus 104 ld~~~GGeLf~hL~~--eg~F~E~~arfYlaEi~lAL~~LH~~-gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR--EGRFSEDRARFYLAEIVLALGYLHSK-GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHHHh--cCCcchhHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence 999999999999975 45699999999999999999999999 999999999999999999999999999985332
Q ss_pred -CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 209 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 209 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
..+.+||+.|||||++.+..++..+|.||+|+++|||++|.+||..+....+.+.....- ....+.-.+.+.++
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-----~~~~p~~ls~~ard 255 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-----LPLPPGYLSEEARD 255 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----CCCCCccCCHHHHH
Confidence 245689999999999999999999999999999999999999998876544443333222 11223336788999
Q ss_pred HHHHhccCCCCCCC
Q 011353 288 LASRCLQYEPRERP 301 (488)
Q Consensus 288 li~~cl~~~p~~Rp 301 (488)
++.++|+.||++|.
T Consensus 256 ll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 256 LLKKLLKRDPRQRL 269 (357)
T ss_pred HHHHHhccCHHHhc
Confidence 99999999999995
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-49 Score=350.75 Aligned_cols=249 Identities=20% Similarity=0.319 Sum_probs=202.8
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc-c-HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-D-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
..|+.++++|+|+||+||||+ .++|+.||||++..+... . .+-.++|+++|++|+|+|+|.++.+|......++|||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 357888999999999999999 667999999999765432 2 3347899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC-C---
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-G--- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~-~--- 209 (488)
||+. ++.+.|.+.. ..++...+.++++|++.|+.|+|++ ++|||||||+||||+.+|.+||+|||+|+.... +
T Consensus 82 ~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~-n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKN-NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred ecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhc-CeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 9988 5555565544 3489999999999999999999998 999999999999999999999999999998763 2
Q ss_pred CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhh-H-HHh------------------hcccccc
Q 011353 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-D-LIR------------------DRNIQTL 268 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~-~~~------------------~~~~~~~ 268 (488)
+.+..|.+|+|||.+.| ..|...+|||++||++.||++|.+.||+... + ... +..+..+
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 34567999999999998 6699999999999999999999988886521 1 110 0111111
Q ss_pred ccccc------cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 TDSCL------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 ~~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.-+.. ...+ +..+.-+.+|+..||+.||.+|++.++++.|
T Consensus 239 ~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 11111 1111 2345689999999999999999999999976
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-49 Score=366.61 Aligned_cols=248 Identities=18% Similarity=0.274 Sum_probs=208.0
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHH--HHHHHHHHhccC-CCCcccEEEEEeeCC-eeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQ--FLEEARAVGQLR-NRRLANLLGCCCEGD-ERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~lv 131 (488)
.+|.++++||.|+||.||+|+ ..++..||||+++..-.. .++ -+||+..|++|. |||||++.+++.+.+ .+++|
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 478899999999999999999 778999999999865432 333 578999999998 999999999999988 99999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
||||+. +|.++++++ ++.|++..+..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+.....
T Consensus 89 fE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~-GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP 165 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH-GFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP 165 (538)
T ss_pred HHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc-CcccccCChhheEecccceeEecccccccccccCCC
Confidence 999977 899999876 77899999999999999999999998 9999999999999999999999999999986654
Q ss_pred -CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchh--hHHHhh-----------------------
Q 011353 210 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHA--LDLIRD----------------------- 262 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~--~~~~~~----------------------- 262 (488)
+.++.|.+|+|||++.. +.|+.+.|||++|||++|+.+-++.||+.. .+.++-
T Consensus 166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn 245 (538)
T KOG0661|consen 166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMN 245 (538)
T ss_pred cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhc
Confidence 56778999999999875 569999999999999999999999898742 111110
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
-.+.......+....+ ..+.++.++|..|+++||.+|||+.+++++
T Consensus 246 f~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 246 FRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred cCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 0111111111111222 377899999999999999999999999998
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-48 Score=358.95 Aligned_cols=249 Identities=20% Similarity=0.298 Sum_probs=204.3
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCC--eeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~E~~ 135 (488)
+...+.||+|+||+||++. .++|...|||.+........+.+.+|+.+|.+++|||||+++|...... ..+|.|||+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~ 98 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA 98 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence 4455667999999999999 4558999999997664333667899999999999999999999855444 689999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-CCCeeeecCCCccccCC------
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRD------ 208 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~DfGla~~~~~------ 208 (488)
++|||.+++.+..+ .+++..+.++..||++||.|||++ |+|||||||+|||++. ++.+||+|||+++....
T Consensus 99 ~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~-g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~ 176 (313)
T KOG0198|consen 99 PGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK-GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD 176 (313)
T ss_pred CCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC-CEeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence 99999999987655 799999999999999999999998 9999999999999999 79999999999886552
Q ss_pred -CCccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCch--hhH-HHhhccccccccccccCCCChHHHH
Q 011353 209 -GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH--ALD-LIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 209 -~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
.....||+.|||||++..+. ...++|||||||++.||+||+.|+... ... ....+... ..+.+|...+.
T Consensus 177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~------~~P~ip~~ls~ 250 (313)
T KOG0198|consen 177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED------SLPEIPDSLSD 250 (313)
T ss_pred ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC------CCCCCCcccCH
Confidence 23467899999999999643 445999999999999999998776642 111 11111111 11245666888
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
++.+|+.+|+..+|++|||+.+++.|......
T Consensus 251 ~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 251 EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 99999999999999999999999999654443
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-47 Score=357.54 Aligned_cols=250 Identities=21% Similarity=0.263 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 131 (488)
+.|+.|.+||+|+||.||+|+ ..+|+.||+|+++... .....-..+||.+|++|+||||++|.+...+. +.+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 456788899999999999999 7889999999998765 33466688999999999999999999999877 689999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
||||+. +|..++.. ..-.|++.++..++.|++.||+|+|++ ||+|||||.+|||||++|.+||+|||||++....
T Consensus 197 FeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~-gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~ 273 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSR-GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS 273 (560)
T ss_pred Eecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhc-CeeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence 999988 89998854 344699999999999999999999999 9999999999999999999999999999965543
Q ss_pred ---CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHH----Hh-------hcccc--cccccc
Q 011353 210 ---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDL----IR-------DRNIQ--TLTDSC 272 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~-------~~~~~--~~~~~~ 272 (488)
+..+.|.+|+|||++.|.. |+...|+||.||||.||++|++++++...-. +. ...+. .++...
T Consensus 274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~ 353 (560)
T KOG0600|consen 274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT 353 (560)
T ss_pred cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccc
Confidence 3345689999999999854 9999999999999999999998887642110 00 00011 111000
Q ss_pred c---cCCC-------ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 273 L---EGQF-------SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 273 ~---~~~~-------~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. ...+ -...+....+|+..+|..||.+|.|+.++++.
T Consensus 354 ~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 354 IFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 0 0001 12245778999999999999999999998875
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-47 Score=328.53 Aligned_cols=248 Identities=21% Similarity=0.305 Sum_probs=204.8
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc--HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+|..++.+|+|.||.||+|+ ..+|+.||||+++.....+ .....+||..|+.++|+||+.++++|.+.+.+.||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 56677888999999999999 6789999999998664332 45689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
++. +|...|++ +...++..++..++.++++||+|||++ .|+||||||.|+|++.+|.+||+|||+|+......
T Consensus 83 m~t-dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~-~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 83 MPT-DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSK-WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred ccc-cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhh-hhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 987 89999976 456799999999999999999999999 99999999999999999999999999999876542
Q ss_pred ccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhh-HHHh-------h------ccccc--------
Q 011353 211 SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIR-------D------RNIQT-------- 267 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~-------~------~~~~~-------- 267 (488)
..+.|..|+|||.+.|.. |+...||||.|||+.||+-|.+.|++... +.+. . ..+..
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 235689999999999854 99999999999999999999977765421 1110 0 00111
Q ss_pred -cccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 -LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 -~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+.... .-+..+.++.+|+..+|..||.+|+|+++++++
T Consensus 240 ~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 240 QFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111111 223356778999999999999999999999987
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-47 Score=336.24 Aligned_cols=236 Identities=18% Similarity=0.216 Sum_probs=205.3
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc---HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.+++++++.||.|+||+|.+++ ..+|..+|+|++++...-. .+...+|..+|+.+.||+++++.+.|.+.++++||
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 4566788889999999999999 6679999999998654333 34477899999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||++||.|.+++++ .+.+++..+..++.||+.||+|||+. +|++|||||+|||+|.+|.+||+|||+|+.....+
T Consensus 123 meyv~GGElFS~Lrk--~~rF~e~~arFYAAeivlAleylH~~-~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~ 199 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRK--SGRFSEPHARFYAAEIVLALEYLHSL-DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW 199 (355)
T ss_pred EeccCCccHHHHHHh--cCCCCchhHHHHHHHHHHHHHHHHhc-CeeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence 999999999999975 45699999999999999999999999 99999999999999999999999999999877653
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
+.+|||.|+|||+++...++.++|.|||||++|||+.|.+||.......+-...... .-.+|...+.++.+|+.
T Consensus 200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~------~v~fP~~fs~~~kdLl~ 273 (355)
T KOG0616|consen 200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG------KVKFPSYFSSDAKDLLK 273 (355)
T ss_pred EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC------cccCCcccCHHHHHHHH
Confidence 568999999999999999999999999999999999999999876442222221111 11356667889999999
Q ss_pred HhccCCCCCC
Q 011353 291 RCLQYEPRER 300 (488)
Q Consensus 291 ~cl~~~p~~R 300 (488)
.+|+.|-.+|
T Consensus 274 ~LL~vD~t~R 283 (355)
T KOG0616|consen 274 KLLQVDLTKR 283 (355)
T ss_pred HHHhhhhHhh
Confidence 9999999999
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=360.54 Aligned_cols=245 Identities=18% Similarity=0.295 Sum_probs=210.2
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..|....++|+|+.|.||.+. ..+++.||||++........+-+.+|+.+|+..+|+|||.++..|...+.+++||||+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 445666788999999999999 6678899999999877777777999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
+||+|.+.+. ...+++.++..|+++++.||+|||.+ ||||||||.+|||++.+|.+||+|||++...... .+
T Consensus 353 ~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~-gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T 428 (550)
T KOG0578|consen 353 EGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHAR-GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST 428 (550)
T ss_pred CCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhc-ceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence 9999999994 45599999999999999999999999 9999999999999999999999999998765443 46
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh-hHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..||+.|||||+.....|.++.||||||++++||+-|++||..+. ...+. .. .......-..+...+..|.+|+.
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly-LI---a~ng~P~lk~~~klS~~~kdFL~ 504 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LI---ATNGTPKLKNPEKLSPELKDFLD 504 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHH-HH---hhcCCCCcCCccccCHHHHHHHH
Confidence 789999999999999999999999999999999999998876432 11110 00 00011111234567899999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||..|+++|+|+.++|+|
T Consensus 505 ~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 505 RCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHhhcchhcCCCHHHHhcC
Confidence 9999999999999999998
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-46 Score=343.97 Aligned_cols=254 Identities=17% Similarity=0.215 Sum_probs=209.3
Q ss_pred CCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc-HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
+-.+|++..+||.|..++||+|. .+.+..||||+++...... ...+.+|++.|+.++||||++++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 34678888899999999999999 6778999999998665443 577999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
.||.+||+.+.++..-...+++..+..|++++++||.|||.+ |.||||||+.||||+++|.|||+|||..-.+.+.
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~-G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN-GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc-CceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 999999999999765445599999999999999999999999 9999999999999999999999999975432221
Q ss_pred -----CccccCCCCCCcccccc--CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccc----cccCCCC
Q 011353 210 -----RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS----CLEGQFS 278 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 278 (488)
....+|+.|||||++.. ..|+.|+||||||++.+||.+|..||..-....+.-.+++.-+.. ....+-.
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~ 262 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDED 262 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHh
Confidence 34578999999999654 459999999999999999999999886543222222222222211 1111112
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+..+.+++..||++||.+|||+++++++
T Consensus 263 k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 263 KKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred hhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 3356789999999999999999999999987
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=377.03 Aligned_cols=250 Identities=26% Similarity=0.393 Sum_probs=212.4
Q ss_pred cccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
+..++++||+|+||.||+|... ....||||.++..... ...+|.+|++++..|+|||||+++|+|.+++..++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 4456788999999999999843 3578999999987765 46679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccC--------CC----CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeee
Q 011353 131 VAEYMPNDTLAKHLFHW--------ET----QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS 198 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~--------~~----~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 198 (488)
|||||..|+|.+||+.. ++ .+++..+.+.|+.|||.||.||-+. .+|||||...|+||+++..|||+
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~-~FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH-HFVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-cccccchhhhhceeccceEEEec
Confidence 99999999999999742 12 2388999999999999999999998 99999999999999999999999
Q ss_pred cCCCccccCCCCcc------ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhh----HHHhhccccc
Q 011353 199 CFGLMKNSRDGRSY------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHAL----DLIRDRNIQT 267 (488)
Q Consensus 199 DfGla~~~~~~~~~------~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~----~~~~~~~~~~ 267 (488)
|||+++.......+ .-.++||+||.+..++||++||||||||||||++| |+-|+.+... +.+..+...
T Consensus 646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL- 724 (774)
T KOG1026|consen 646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLL- 724 (774)
T ss_pred ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcc-
Confidence 99999976654333 22578999999999999999999999999999999 6566655332 233333321
Q ss_pred cccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
..|..++.++.+||..||+.+|.+|||++||-..|+......
T Consensus 725 --------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 725 --------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred --------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 235567889999999999999999999999999999886643
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-47 Score=372.46 Aligned_cols=351 Identities=21% Similarity=0.265 Sum_probs=265.4
Q ss_pred cCHHHHHHHhcCCCc------ccccccCCCCCCCeEEEEEeCC----CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCC
Q 011353 44 YSIETLRTATSGFAM------ENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRN 112 (488)
Q Consensus 44 ~~~~~~~~~~~~~~~------~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h 112 (488)
+++++--.+.+.|.. ..|-+.||.|.||.|++|.++- ...||||.++....+ ..++|+.|+.+|.+++|
T Consensus 610 ~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdH 689 (996)
T KOG0196|consen 610 HTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDH 689 (996)
T ss_pred ccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCC
Confidence 455555555555533 2344667999999999999532 467999999976543 45679999999999999
Q ss_pred CCcccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 113 ~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
|||++|.|+.+....++||+|||++|+|+.||+.+.++ |++.++.-++++|+.||+||-+. ++|||||...|||++.+
T Consensus 690 PNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm-~YVHRDLAARNILVNsn 767 (996)
T KOG0196|consen 690 PNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDM-NYVHRDLAARNILVNSN 767 (996)
T ss_pred CcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhc-Cchhhhhhhhheeeccc
Confidence 99999999999999999999999999999999886654 99999999999999999999999 99999999999999999
Q ss_pred CCeeeecCCCccccCCCCc-ccc------CCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcc
Q 011353 193 VNPRLSCFGLMKNSRDGRS-YST------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 264 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~~~-~~~------~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~ 264 (488)
..+|++|||+++...+... ... .++|+|||.+...++|.+||||||||||||.++ |..|+.....+....
T Consensus 768 LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIk-- 845 (996)
T KOG0196|consen 768 LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK-- 845 (996)
T ss_pred eEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHH--
Confidence 9999999999998755432 111 368999999999999999999999999999887 777765433222221
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCCCCcccccCCCCCCCCCCCCCCcc--c
Q 011353 265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGD--A 342 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~ 342 (488)
-+....+-..|.+++..|.+||..||++|-.+||.+.+|+.+|..+.+++.......... +.+..|+.+ .
T Consensus 846 ---aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~-----~r~s~~lld~~~ 917 (996)
T KOG0196|consen 846 ---AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPES-----PRPSQPLLDRSG 917 (996)
T ss_pred ---HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCC-----CCCcccccCCCC
Confidence 222222334567899999999999999999999999999999999988876543322211 122222222 1
Q ss_pred ccccchhHHHHHHHHhc---CCCccchhhhhhhhhhhhhhHhhhhHHHhhhHHH-hhcCHHHHHHHHHHH
Q 011353 343 CLRMDLTAIHEILEKLG---YKDDEGAATELSFQMWTGQMQETLNSKKKGDVAF-RHKDFRASIECYTQF 408 (488)
Q Consensus 343 ~~~~~~~~~~~~l~~~g---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~a 408 (488)
+......++.+||+.++ |.+.+.++...++....+.. ++++...|..+. .+++.-..++.++.-
T Consensus 918 ~~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~V~q~s--~eDl~~~Gitl~GhqkkIl~SIq~m~~q 985 (996)
T KOG0196|consen 918 SDFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSFEDVAQMS--AEDLLRLGITLAGHQKKILSSIQAMRAQ 985 (996)
T ss_pred CCCcccCCHHHHHHHhhhhHHHHHHHhcCcccHHHHHhhh--HHHHHhhceeecchhHHHHHHHHHHHHH
Confidence 22234568999999988 55666777777777766654 345565665542 234444445444443
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-46 Score=331.76 Aligned_cols=255 Identities=18% Similarity=0.196 Sum_probs=206.9
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEee--CC
Q 011353 52 ATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE--GD 126 (488)
Q Consensus 52 ~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 126 (488)
..++.+.|+.+.+|++|+||.||+|+ ..+++.||+|+++..... -...-++||.+|.+++|||||.+..+... -+
T Consensus 71 gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d 150 (419)
T KOG0663|consen 71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMD 150 (419)
T ss_pred CcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc
Confidence 34556677888889999999999999 677899999999865422 23456899999999999999999888753 45
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
.+|||||||+. +|.+++... .+++....+..++.|+++|++|||.. .|+||||||+|+|++..|.+||+|||+|+..
T Consensus 151 ~iy~VMe~~Eh-DLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~-wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 151 KIYIVMEYVEH-DLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDN-WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeeeeHHHHHh-hHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhc-eeEecccchhheeeccCCcEEecccchhhhh
Confidence 69999999987 899999764 36799999999999999999999998 9999999999999999999999999999987
Q ss_pred CCC----CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh-----------ccccc---
Q 011353 207 RDG----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RNIQT--- 267 (488)
Q Consensus 207 ~~~----~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-----------~~~~~--- 267 (488)
... +..+.|..|+|||.+.+.+ |++..|+||+|||+.||+++++.|++...-...+ ..+..
T Consensus 228 gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 228 GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 665 4456799999999999865 9999999999999999999998887642110000 01111
Q ss_pred -----------cccccccCCCChH-HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 -----------LTDSCLEGQFSSD-EGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 -----------~~~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.....++..++.. .+....+|+..+|..||.+|.|+.+.|++
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1111122222222 45788999999999999999999999988
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-46 Score=355.36 Aligned_cols=242 Identities=19% Similarity=0.252 Sum_probs=209.8
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+|.+...+|+|+||+||||+ ..+.+.||+|.+.+.... ..+.+.+|+++++.++|||||.++++|+...++++|+||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 34555667999999999999 667889999999865433 466799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
+.| +|..+|.. ++.++++.+..|+.++..||.|||+. +|+|||+||.|||++..|.+|++|||+|+.+...+
T Consensus 83 a~g-~L~~il~~--d~~lpEe~v~~~a~~LVsaL~yLhs~-rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt 158 (808)
T KOG0597|consen 83 AVG-DLFTILEQ--DGKLPEEQVRAIAYDLVSALYYLHSN-RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT 158 (808)
T ss_pred hhh-hHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence 977 99999975 45699999999999999999999999 99999999999999999999999999999887664
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...|||.|||||+..++.|+..+|+||+||++||+++|++||.....-........+- ..+|...+..+.+|+.
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~------v~~p~~~S~~f~nfl~ 232 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDP------VKPPSTASSSFVNFLQ 232 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCC------CCCcccccHHHHHHHH
Confidence 4578999999999999999999999999999999999999987654332222221111 1234567889999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
..|.+||.+|.|+.+++.|
T Consensus 233 gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 233 GLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHhhcChhhcccHHHHhcC
Confidence 9999999999999999987
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=350.68 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=207.9
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 130 (488)
-.++.+.+.||.|+|++|++|+ ..+++.+|||++.+... ...+-..+|-.+|.+| .||.|++|+..|.+...+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 3455666777999999999999 67799999999975432 1233467788999999 89999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
|+||+++|+|.++|.+ -+.|++.-...++.||+.||+|||+. |||||||||+|||+|.++++||+|||.|+.+...
T Consensus 152 vLe~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH~~-GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLHSN-GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred EEEecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 9999999999999976 35699999999999999999999999 9999999999999999999999999999865421
Q ss_pred ----------------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccc
Q 011353 210 ----------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273 (488)
Q Consensus 210 ----------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
.+.+||-.|.+||++.....+..+|+|+||||||+|+.|.+||.+...-.+-+..+ . +
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~-~-----l 302 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ-A-----L 302 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH-H-----h
Confidence 23578999999999999999999999999999999999998887654332222211 1 1
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.-.++...++.+.+|+.+.|..||.+|+|..+|.+|
T Consensus 303 ~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 303 DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 234566677899999999999999999999999887
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-45 Score=353.61 Aligned_cols=245 Identities=20% Similarity=0.228 Sum_probs=208.4
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC----CC-ccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCee
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS----AW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDER 128 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 128 (488)
...|.+.+.||+|+||.|+.|. ..++..||+|+++.. .. ...+.+.+|+.+++.++ ||||++++.++......
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 4577888899999999999998 567899999987764 11 22445778999999998 99999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC-CCeeeecCCCccccC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR 207 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~DfGla~~~~ 207 (488)
++||||+.||+|.+++.+ .+++.+..+.+++.|++.|++|||+. ||+||||||+|||++.+ +++||+|||++....
T Consensus 96 ~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~-gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR-GIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 999999999999999976 56799999999999999999999999 99999999999999999 999999999998772
Q ss_pred -C---CCccccCCCCCCccccccCC-CC-CCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 208 -D---GRSYSTNLAFTPPEYLRTGR-VT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 208 -~---~~~~~~~~~y~aPE~~~~~~-~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
. ..+..||+.|+|||++.+.. |+ .++||||+||+||-|++|..||............... .-.+|...
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~------~~~~p~~~ 246 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG------EFKIPSYL 246 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC------CccCCCCc
Confidence 2 25678999999999999877 76 6899999999999999999999875433332221111 11234444
Q ss_pred -HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 282 -GTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 282 -~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+.++..++.+||..||.+|+|+.+|+.+
T Consensus 247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 7899999999999999999999999955
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-45 Score=346.92 Aligned_cols=261 Identities=16% Similarity=0.149 Sum_probs=208.0
Q ss_pred CCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
+..+++++..||+|+||.||+|+ ..+|..+|+|+++++.. ........|-.+|...++|+||+|+-.|.+.+++||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 45677889999999999999999 66799999999987643 235567889999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~-- 208 (488)
||||++||++..+|.+ .+.|++..+..++.+++.|+..||+. |+|||||||+|+|||..|++||+||||+.....
T Consensus 219 iMEylPGGD~mTLL~~--~~~L~e~~arfYiaE~vlAI~~iH~~-gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR--KDTLTEDWARFYIAETVLAIESIHQL-GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHHh--cCcCchHHHHHHHHHHHHHHHHHHHc-CcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 9999999999999975 56799999999999999999999998 999999999999999999999999999742100
Q ss_pred -----------------------C-----C---------------------ccccCCCCCCccccccCCCCCCccchhhH
Q 011353 209 -----------------------G-----R---------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFG 239 (488)
Q Consensus 209 -----------------------~-----~---------------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 239 (488)
. . +.+|||.|||||++.+..|+..+|.||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0 0 23578999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCCC
Q 011353 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (488)
Q Consensus 240 ~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 319 (488)
||+|||+.|-+||.++..+..-..... +.. .+........+.++.+||.+|+. ||++|.. ..-+++|.+.+.+
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~n-wr~-~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG----~~G~~EIK~HPfF 448 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVN-WRE-TLKFPEEVDLSDEAKDLITRLLC-DPENRLG----SKGAEEIKKHPFF 448 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHH-Hhh-hccCCCcCcccHHHHHHHHHHhc-CHHHhcC----cccHHHHhcCCcc
Confidence 999999999999987654332221110 000 01111112345899999999999 9999964 2234445555554
Q ss_pred Cccccc
Q 011353 320 PSHVLM 325 (488)
Q Consensus 320 ~~~~~~ 325 (488)
..-.|.
T Consensus 449 ~~v~W~ 454 (550)
T KOG0605|consen 449 KGVDWD 454 (550)
T ss_pred ccCCcc
Confidence 443333
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=344.30 Aligned_cols=237 Identities=21% Similarity=0.323 Sum_probs=200.9
Q ss_pred cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHH
Q 011353 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 141 (488)
++=||.|+.|-||+|++.+ +.||||+++.-. ..+|.-|++|+||||+.+.|+|......+||||||..|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl~n-etVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHN-ETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeeccC-ceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 4457999999999999855 489999987432 34677899999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---CccccCCCC
Q 011353 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLAF 218 (488)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~~~~~~~y 218 (488)
..|+. +++++......|..+|+.||.|||.. .|||||||.-||||+.+..|||+|||.++...+. ....||..|
T Consensus 201 ~VLka--~~~itp~llv~Wsk~IA~GM~YLH~h-KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW 277 (904)
T KOG4721|consen 201 EVLKA--GRPITPSLLVDWSKGIAGGMNYLHLH-KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW 277 (904)
T ss_pred HHHhc--cCccCHHHHHHHHHHhhhhhHHHHHh-hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence 99974 56799999999999999999999998 9999999999999999999999999998865544 456799999
Q ss_pred CCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCC
Q 011353 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298 (488)
Q Consensus 219 ~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 298 (488)
||||++...+.+.|+||||||||||||+||..|+..-....+.. .+=...+.-..|..++.-|.-|+..||+..|.
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw----GVGsNsL~LpvPstcP~GfklL~Kqcw~sKpR 353 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW----GVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPR 353 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE----eccCCcccccCcccCchHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998764322111111 11122233345667888899999999999999
Q ss_pred CCCChHHHHHHHHhh
Q 011353 299 ERPNPRSLVTALVTL 313 (488)
Q Consensus 299 ~Rps~~~il~~L~~~ 313 (488)
.|||+++|+.||+-.
T Consensus 354 NRPSFrqil~HldIa 368 (904)
T KOG4721|consen 354 NRPSFRQILLHLDIA 368 (904)
T ss_pred CCccHHHHHHHHhhc
Confidence 999999999998743
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=352.86 Aligned_cols=253 Identities=21% Similarity=0.326 Sum_probs=201.4
Q ss_pred cccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC-ee
Q 011353 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD-ER 128 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-~~ 128 (488)
++++.+.||.|+||.||+|.. .++..||||+++..... ....+.+|+.++..+ +||||+++++++...+ ..
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL 87 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence 567888899999999999973 23568999999754322 345689999999999 8999999999987644 57
Q ss_pred EEEEecCCCCCHHhhhccCC------------------------------------------------------------
Q 011353 129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 148 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~------------------------------------------------------------ 148 (488)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T cd05102 88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW 167 (338)
T ss_pred EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence 89999999999999986421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC------CccccCCCCCCcc
Q 011353 149 TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPE 222 (488)
Q Consensus 149 ~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE 222 (488)
..++++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ....+++.|+|||
T Consensus 168 ~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 246 (338)
T cd05102 168 KSPLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE 246 (338)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence 13478889999999999999999998 9999999999999999999999999999764322 1223457899999
Q ss_pred ccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCC
Q 011353 223 YLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301 (488)
Q Consensus 223 ~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 301 (488)
++.+..++.++|||||||++|||++ |..||............. . .......+...++.+.+++.+||+.||.+||
T Consensus 247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP 322 (338)
T cd05102 247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRL---K-DGTRMRAPENATPEIYRIMLACWQGDPKERP 322 (338)
T ss_pred HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH---h-cCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence 9998889999999999999999997 888876532111100000 0 0011122334567899999999999999999
Q ss_pred ChHHHHHHHHhhhc
Q 011353 302 NPRSLVTALVTLQK 315 (488)
Q Consensus 302 s~~~il~~L~~~~~ 315 (488)
|+.++++.|+.+..
T Consensus 323 s~~el~~~l~~~~~ 336 (338)
T cd05102 323 TFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=350.35 Aligned_cols=254 Identities=24% Similarity=0.372 Sum_probs=210.1
Q ss_pred cccccCCCCCCCeEEEEEeC--CC---CEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 60 NIVSEHGEKAPNVVYKGKLE--NQ---FRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~--~~---~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.+.++||+|+||.||+|.+. ++ ..||||..+... .....+|++|+++|++++|||||+++|++.+...++||
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 34578899999999999943 22 238999988522 23466799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 211 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 211 (488)
||+|.||+|.++|++.+. .++..++..++.+.+.||+|||++ ++|||||..+|+|++.++.+||+|||+++.......
T Consensus 240 mEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k-~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~ 317 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK-NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM 317 (474)
T ss_pred EEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC-CCcchhHhHHHheecCCCeEEeCccccccCCcceee
Confidence 999999999999987443 599999999999999999999999 999999999999999999999999999876542211
Q ss_pred ----cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 212 ----YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 212 ----~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
..-...|+|||.+..+.++.++|||||||++||+++ |..|+++........... ....+...+...+.++.
T Consensus 318 ~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~----~~~~r~~~~~~~p~~~~ 393 (474)
T KOG0194|consen 318 KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV----KNGYRMPIPSKTPKELA 393 (474)
T ss_pred ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH----hcCccCCCCCCCHHHHH
Confidence 123578999999999999999999999999999999 777777654433332221 11222233445678899
Q ss_pred HHHHHhccCCCCCCCChHHHHHHHHhhhcCCCC
Q 011353 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 319 (488)
.++..||..+|+.||||.++.+.|+.+.+....
T Consensus 394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999877654
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=341.36 Aligned_cols=244 Identities=15% Similarity=0.253 Sum_probs=205.9
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.|+.+..||+|+||.||+|. ..+++.||+|++...... ..+.+.+|+.+|.+++++||.++++.+..+..++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 34555777999999999999 567899999999876544 3667899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
.||++.+.+.. +..+++..+.-++++++.||.|||.. +.+|||||+.|||+..+|.+||+|||.+...... .+
T Consensus 94 ~gGsv~~lL~~--~~~~~E~~i~~ilre~l~~l~ylH~~-~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t 170 (467)
T KOG0201|consen 94 GGGSVLDLLKS--GNILDEFEIAVILREVLKGLDYLHSE-KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT 170 (467)
T ss_pred cCcchhhhhcc--CCCCccceeeeehHHHHHHhhhhhhc-ceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence 99999999953 34458888999999999999999999 9999999999999999999999999998765433 46
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..||+.|||||++.+..|+.|+||||||++.+||.+|.+|+..... .....++.....+......++.+++|+..
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-----mrvlflIpk~~PP~L~~~~S~~~kEFV~~ 245 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-----MRVLFLIPKSAPPRLDGDFSPPFKEFVEA 245 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-----ceEEEeccCCCCCccccccCHHHHHHHHH
Confidence 7899999999999988999999999999999999999976543211 11222222222233333577889999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||.+||+.|||+.++++|
T Consensus 246 CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 246 CLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HhhcCcccCcCHHHHhhh
Confidence 999999999999999987
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-44 Score=338.07 Aligned_cols=245 Identities=17% Similarity=0.240 Sum_probs=202.0
Q ss_pred cCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCcc---HHHHHHHHHHHhccCCCCcccEEEEEee----CCeeEEEEecCC
Q 011353 64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVAEYMP 136 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~E~~~ 136 (488)
.+|+|++|.||+|.+ +|+.||||.++...... .+.|.+|+.+|.+++||||++++|++.+ ....++||||++
T Consensus 27 ~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~ 105 (283)
T PHA02988 27 LIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT 105 (283)
T ss_pred EEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence 359999999999998 67799999998654333 4568899999999999999999999877 356899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-CccccC
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTN 215 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~~~~ 215 (488)
+|+|.+++.. .+.+++.....++.|++.||.|||+..+++||||||+|||+++++.+||+|||+++..... ....++
T Consensus 106 ~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 183 (283)
T PHA02988 106 RGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF 183 (283)
T ss_pred CCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCc
Confidence 9999999965 3468999999999999999999998448899999999999999999999999998865433 334578
Q ss_pred CCCCCcccccc--CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhc
Q 011353 216 LAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293 (488)
Q Consensus 216 ~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 293 (488)
..|+|||++.+ ..++.++|||||||++|||+||+.||............. ........+...+..+.+++.+||
T Consensus 184 ~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~~l~~li~~cl 259 (283)
T PHA02988 184 MVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLII----NKNNSLKLPLDCPLEIKCIVEACT 259 (283)
T ss_pred ccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHH----hcCCCCCCCCcCcHHHHHHHHHHh
Confidence 89999999976 679999999999999999999999887543222211111 111111233346788999999999
Q ss_pred cCCCCCCCChHHHHHHHHhhhc
Q 011353 294 QYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 294 ~~~p~~Rps~~~il~~L~~~~~ 315 (488)
+.||++|||+.++++.|+.+..
T Consensus 260 ~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 260 SHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred cCCcccCcCHHHHHHHHHHHHh
Confidence 9999999999999999998753
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=352.63 Aligned_cols=239 Identities=19% Similarity=0.287 Sum_probs=205.7
Q ss_pred CCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
+..++++++.||+|+||.|+++. ..+++.+|||.+++... .+.+..+.|.+++... +||.+++++..|.+.+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 45567788999999999999999 56688999999987643 3466788899998888 5999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC--
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-- 207 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~-- 207 (488)
+||||+.||++..+. ..+.+++..+..++..|+.||.|||++ ||||||||.+|||+|.+|++||+|||+++..-
T Consensus 446 fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~-~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHEN-GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhc-CceeeecchhheEEcccCcEEecccccccccCCC
Confidence 999999999954443 235699999999999999999999999 99999999999999999999999999998532
Q ss_pred --CCCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 208 --DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 208 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
..++.+||+.|||||++.+..|+..+|.|||||+||||+.|+.||+++..+.+-+..... ...+|...+.++
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d------~~~yP~~ls~ea 595 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSKEA 595 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CCCCCCcccHHH
Confidence 335678999999999999999999999999999999999999999987665544333222 123566688999
Q ss_pred HHHHHHhccCCCCCCCCh
Q 011353 286 VRLASRCLQYEPRERPNP 303 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~ 303 (488)
.+++.++|.++|++|..+
T Consensus 596 ~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 596 IAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHHhccCcccccCC
Confidence 999999999999999754
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-43 Score=366.01 Aligned_cols=421 Identities=18% Similarity=0.126 Sum_probs=285.6
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.+|++++.||+|+||.||+|.. .+++.||||+++..... ..+++.+|+.+++.++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4678889999999999999994 56899999999754322 2456899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 133 EYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
||++||+|.+++.... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.++|+|||++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~-GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK-GVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC-CccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999886311 12356778899999999999999998 9999999999999999999999999998
Q ss_pred cccCCC----------------------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh
Q 011353 204 KNSRDG----------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR 261 (488)
Q Consensus 204 ~~~~~~----------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 261 (488)
+..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 765110 1235789999999999999999999999999999999999888653221111
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCC-ChHHHHHHHHhhhcCCCC--Cccccc-------C-----
Q 011353 262 DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP-NPRSLVTALVTLQKDTEV--PSHVLM-------G----- 326 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-s~~~il~~L~~~~~~~~~--~~~~~~-------~----- 326 (488)
... ....+... ......+..+.+++.+||+.||++|| ++.++++.|+........ +..... .
T Consensus 241 ~~~--~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~i 317 (932)
T PRK13184 241 YRD--VILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEPI 317 (932)
T ss_pred hhh--hccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccchh
Confidence 110 11111000 01123557799999999999999996 577777777766432110 000000 0
Q ss_pred -----C----CCCC-----------------------------CCCCCCCCcccccccchh-HHHHHH-----------H
Q 011353 327 -----I----PHGA-----------------------------AALPLSPLGDACLRMDLT-AIHEIL-----------E 356 (488)
Q Consensus 327 -----~----~~~~-----------------------------~~~~~~p~~~~~~~~~~~-~~~~~l-----------~ 356 (488)
. ..+. ...-+.|+.....+.+.. ...-|+ .
T Consensus 318 Llsk~~~~l~~s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 397 (932)
T PRK13184 318 LLSKYFPMLESSPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSVSLV 397 (932)
T ss_pred hhhhhcccccCCchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccccceeeecccccceeeee
Confidence 0 0000 000000111111000000 000010 0
Q ss_pred HhcCCCccchh--------hhhhhhhhhhh---------------------------hHhh-----------------hh
Q 011353 357 KLGYKDDEGAA--------TELSFQMWTGQ---------------------------MQET-----------------LN 384 (488)
Q Consensus 357 ~~g~~~~~~~~--------~~~a~~~~~~~---------------------------~~~~-----------------~~ 384 (488)
+.+..-..... ...++...... +.++ .+
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (932)
T PRK13184 398 KNGLEIQKKSQEIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALRVS 477 (932)
T ss_pred cccceeecCCcccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCceeee
Confidence 00000000000 00000000000 0000 01
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCC--CCHHHHhhHHHHHHhc----C---ChHHHHHHHHHhHhhCCCchHHHH
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTM--VSPTAFARRSLSYLMS----D---MPQEALNDASQAQVISPVWHMAAY 455 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--~~~~~~~~~~~~~~~~----~---~~~~A~~~~~~al~l~p~~~~a~~ 455 (488)
...-..++...+.|++|+..|++.-..-|. ...++.++.|...+++ | .+++|+..|++ |.-.|.-|--|.
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 556 (932)
T PRK13184 478 CLAVPDAFLAEKLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSY-LHGGVGAPLEYL 556 (932)
T ss_pred cccCcHHHHhhHHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHH-hcCCCCCchHHH
Confidence 114456778889999999999999999986 2456778888887764 2 47788888887 445577788899
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 456 LQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
.+|.+|..+|+|+|-+++|.-|++.-|
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (932)
T PRK13184 557 GKALVYQRLGEYNEEIKSLLLALKRYS 583 (932)
T ss_pred hHHHHHHHhhhHHHHHHHHHHHHHhcC
Confidence 999999999999999999999998754
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=348.54 Aligned_cols=248 Identities=17% Similarity=0.228 Sum_probs=215.8
Q ss_pred CCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
....+++-+.||.|+.|.|-+|+ ..+|+.+|||++.+.. ......+.+|+-+|+.+.||||+++++++++..++|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 35677888889999999999999 6789999999997642 1224458899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
|.||++||.|.+++.+ ++++++..+.++++||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|.....+
T Consensus 90 vlEyv~gGELFdylv~--kG~l~e~eaa~ff~QIi~gv~yCH~~-~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVR--KGPLPEREAAHFFRQILDGVSYCHAF-NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEEecCCchhHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHhhh-cceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 9999999999999975 66799999999999999999999998 9999999999999999999999999999876665
Q ss_pred --CccccCCCCCCccccccCCCC-CCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
.+.+|++.|.+||++.|.+|. .++||||.|||||-|+||+.||.++....+......... ..|...+.+++
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f------~MPs~Is~eaQ 240 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF------EMPSNISSEAQ 240 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc------cCCCcCCHHHH
Confidence 467899999999999999974 589999999999999999999987765544333322222 23566788999
Q ss_pred HHHHHhccCCCCCCCChHHHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
+|+.+||..||++|.|+++|++|-.
T Consensus 241 dLLr~ml~VDp~~RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 241 DLLRRMLDVDPSTRITTEEILKHPF 265 (786)
T ss_pred HHHHHHhccCccccccHHHHhhCch
Confidence 9999999999999999999999843
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-44 Score=345.08 Aligned_cols=252 Identities=21% Similarity=0.328 Sum_probs=207.0
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
...+...||+|+||+||+|.+.+ .||||+++..... ..+.|++|+.++++-+|.||+-+.|+|..+.. .||+.+|
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwC 469 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWC 469 (678)
T ss_pred Hhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhc
Confidence 34466778999999999999854 5999999876543 35679999999999999999999999998887 9999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC------
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------ 209 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~------ 209 (488)
+|.||..+|+..+ ..|+..+.+.|+.||++||.|||.+ +|||||||..||++.+++.|||+||||+......
T Consensus 470 eGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK-~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~ 547 (678)
T KOG0193|consen 470 EGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK-NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL 547 (678)
T ss_pred cCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh-hhhhhhccccceEEccCCcEEEecccceeeeeeecccccc
Confidence 9999999998644 4599999999999999999999999 9999999999999999999999999998643221
Q ss_pred CccccCCCCCCcccccc---CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
....+...|||||+++. .+|++.+||||||+|+|||+||..|+.....+.+.-..-.....+.. ......++.++.
T Consensus 548 ~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~-s~~~s~~pk~mk 626 (678)
T KOG0193|consen 548 EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDL-SKIRSNCPKAMK 626 (678)
T ss_pred CCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccc-hhhhccCHHHHH
Confidence 12245678999999985 45999999999999999999999887755444433222222111111 112345678999
Q ss_pred HHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 287 RLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
+|+..||..++++||.+.+|+..|+.+..
T Consensus 627 ~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 627 RLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred HHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 99999999999999999999999888776
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=335.86 Aligned_cols=252 Identities=17% Similarity=0.179 Sum_probs=204.6
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--------------cHHHHHHHHHHHhccCCCCcccEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------------DARQFLEEARAVGQLRNRRLANLLG 120 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------~~~~~~~e~~~l~~l~h~niv~l~~ 120 (488)
...|+++.+||+|.||.|-+|. ..+++.||||++.+.... ..+...+||.+|++|+|||||+|+.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 4567899999999999999999 567899999999653211 2357889999999999999999999
Q ss_pred EEeeC--CeeEEEEecCCCCCHHhhhccCCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeee
Q 011353 121 CCCEG--DERLLVAEYMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (488)
Q Consensus 121 ~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 197 (488)
+..+. +.+|||+|||..|.+...= ...+ +++.++++++.++..||+|||.+ |||||||||+|+||+++|++||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q-giiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ-GIIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEEcCCCcEEe
Confidence 99775 5699999999988765432 3445 99999999999999999999999 9999999999999999999999
Q ss_pred ecCCCccccCCC---------CccccCCCCCCccccccCC----CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc
Q 011353 198 SCFGLMKNSRDG---------RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (488)
Q Consensus 198 ~DfGla~~~~~~---------~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 264 (488)
+|||.+.....+ ....|||.|+|||.+.++. .+.+.||||+||+||.|+.|+.||.++..-..-..
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~K- 330 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDK- 330 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHH-
Confidence 999988755322 2467899999999998743 35578999999999999999999987644332222
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
++...+.-...++..+++.+||.++|.+||++|.+..+|..|....+.
T Consensus 331 ---Ivn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 331 ---IVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred ---HhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 222222212223467889999999999999999999999998765554
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-44 Score=340.65 Aligned_cols=248 Identities=17% Similarity=0.220 Sum_probs=201.8
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
|++++.||+|+||.||++. ..+++.||||.+..... .....+.+|+.++..++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 3456777999999999999 56789999999875322 2234578999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---Cc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 211 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~ 211 (488)
+++|+|.+++.......+++..+..++.|++.||.|||+. +++||||||+|||+++++.++|+|||++...... ..
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG 160 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence 9999999888654445689999999999999999999998 9999999999999999999999999998865433 23
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..+|..|+|||++.+..++.++|||||||++|+|++|+.||...............+.. ....++...+..+.+|+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~ 238 (285)
T cd05631 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--DQEEYSEKFSEDAKSICRM 238 (285)
T ss_pred CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--ccccCCccCCHHHHHHHHH
Confidence 46789999999999999999999999999999999999988653221111000000110 1112334466789999999
Q ss_pred hccCCCCCCCC-----hHHHHHH
Q 011353 292 CLQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps-----~~~il~~ 309 (488)
||+.||.+||+ +.+++++
T Consensus 239 ~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 239 LLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred HhhcCHHHhcCCCCCCHHHHhcC
Confidence 99999999997 7888876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=343.25 Aligned_cols=247 Identities=19% Similarity=0.200 Sum_probs=218.2
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCe-eEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE-RLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 132 (488)
+.|..++.+|+|+||.++.+. ..++..+++|.+...... ..+...+|+.++++++|||||.+.+.|.+++. ++|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 467888999999999999999 556789999999765432 24468899999999999999999999999888 99999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
+||+||+|.+.|.+.++..++++.+.+|+.|++.|+.|||++ +|+|||||+.||+++.++.|||+|||+|+.....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~-~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN-RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 999999999999887767899999999999999999999988 9999999999999999999999999999987765
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
.+..||+.||+||.+.+.+|..|+|||||||++|||++-+.+|.................. ..+...+.++..+
T Consensus 163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~-----Plp~~ys~el~~l 237 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS-----PLPSMYSSELRSL 237 (426)
T ss_pred hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC-----CCCccccHHHHHH
Confidence 4578999999999999999999999999999999999999988876655555444444432 3455678899999
Q ss_pred HHHhccCCCCCCCChHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~ 309 (488)
+..||+.+|..||++.+++.+
T Consensus 238 v~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 238 VKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999987
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-45 Score=331.28 Aligned_cols=249 Identities=22% Similarity=0.275 Sum_probs=197.5
Q ss_pred cccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCC-----eeEEEEecC
Q 011353 62 VSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLLVAEYM 135 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~E~~ 135 (488)
.+.+|+|+||.||+|. ..+++.||||+...+.. --.+|+++|+.++|||||++.-+|.... ...+|||||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 3455999999999999 55678999999875432 2347999999999999999998886432 346899999
Q ss_pred CCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC-CCeeeecCCCccccCCC---
Q 011353 136 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 136 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~DfGla~~~~~~--- 209 (488)
|. ||.++++.. .+..++...+.-+.+||++||.|||+. ||+||||||.|+|+|.+ |.+||+|||.|+....+
T Consensus 105 P~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~-~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn 182 (364)
T KOG0658|consen 105 PE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH-GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN 182 (364)
T ss_pred hH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc-CcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc
Confidence 87 899999742 245688888999999999999999997 99999999999999855 99999999999986554
Q ss_pred CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhH-H---------------Hhh-------ccc
Q 011353 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALD-L---------------IRD-------RNI 265 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~---------------~~~-------~~~ 265 (488)
.++..|..|+|||.+.|.. |+.+.||||.|||+.||+-|++.|+++... . +.. ...
T Consensus 183 iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~ 262 (364)
T KOG0658|consen 183 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKF 262 (364)
T ss_pred eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccC
Confidence 4567799999999999865 999999999999999999999999875211 0 100 011
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhhhcC
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQKD 316 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~~~ 316 (488)
..+........+....++++.+|+.++|+.+|.+|.++.+++.| ++.++..
T Consensus 263 p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 263 PQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred cccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 11111111112344567899999999999999999999999987 5566544
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=343.17 Aligned_cols=253 Identities=17% Similarity=0.222 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.+|++++.||+|+||.||++.. .++..||+|.+...... ....+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 4678889999999999999994 56889999998764322 245699999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--Ccc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY 212 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~~ 212 (488)
+++|+|.+++.. ...+++..+..++.|++.||.|||++.+++||||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 999999999965 3458999999999999999999998646999999999999999999999999998765432 345
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccc-------------------------
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT------------------------- 267 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~------------------------- 267 (488)
.+++.|+|||++.+..++.++|||||||++|||+||+.||.......+.......
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 6789999999999888999999999999999999999988643221111000000
Q ss_pred -----------------cccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 268 -----------------LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 268 -----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
+.............+.++.+|+.+||+.||++|||+.+++++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 00000000001135678999999999999999999999999843
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-44 Score=346.05 Aligned_cols=245 Identities=15% Similarity=0.174 Sum_probs=204.7
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
+.+|.+++.||+|+||.||+|.. .+++.||||+++... ......+.+|+.++..++||||+++++++.+.+..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 46788889999999999999995 568899999987532 12345688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-C
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~ 210 (488)
|||+++|+|.+++.. .+.+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++..... .
T Consensus 97 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 97 LEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSK-DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred EcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence 999999999999975 34689999999999999999999998 9999999999999999999999999999876543 3
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...||+.|+|||++.+..++.++|||||||++|+|+||..||............... ...++...+..+.+|+.
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG------RLKFPNWFDGRARDLVK 247 (329)
T ss_pred eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CcCCCCCCCHHHHHHHH
Confidence 456889999999999888999999999999999999999988654322111111111 01123335678999999
Q ss_pred HhccCCCCCCCC-----hHHHHHH
Q 011353 291 RCLQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps-----~~~il~~ 309 (488)
+||+.||.+||+ +.+++.|
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999987 6888776
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=344.73 Aligned_cols=237 Identities=18% Similarity=0.226 Sum_probs=199.0
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
.||+|+||.||++. ..+|+.||||+++... ......+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 46999999999999 4578999999997532 1234567889999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCccccC
Q 011353 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTN 215 (488)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~~ 215 (488)
|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 82 LFFHLSR--ERVFSEDRARFYGAEIVSALGYLHSC-DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 9999864 45689999999999999999999998 999999999999999999999999999875322 1234689
Q ss_pred CCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccC
Q 011353 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (488)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (488)
+.|+|||++.+..++.++|||||||++|||+||+.||............... ...++...+.++.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999889999999999999999999999988764433222211111 1123445677899999999999
Q ss_pred CCCCCC-----ChHHHHHH
Q 011353 296 EPRERP-----NPRSLVTA 309 (488)
Q Consensus 296 ~p~~Rp-----s~~~il~~ 309 (488)
||++|| ++.++++|
T Consensus 233 dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CHHHcCCCCCCCHHHHHcC
Confidence 999999 78998876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-44 Score=308.07 Aligned_cols=246 Identities=20% Similarity=0.255 Sum_probs=210.4
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+++-+.||+|-||.||.|. ..++..||+|++-++.. +-..++.+|+++-+.|+||||++++++|.+...+|+++||
T Consensus 24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEy 103 (281)
T KOG0580|consen 24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEY 103 (281)
T ss_pred ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEe
Confidence 4455667999999999999 67788999999865432 2356799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--CCcc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY 212 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~--~~~~ 212 (488)
.++|+|...|.......+++.....++.|++.||.|+|.+ ++|||||||+|+|++..+.+||+|||-+..... .++.
T Consensus 104 a~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k-~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tl 182 (281)
T KOG0580|consen 104 APRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTL 182 (281)
T ss_pred cCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC-CcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceee
Confidence 9999999999866667799999999999999999999999 999999999999999999999999998766543 3567
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
+||..|.+||...+...+..+|+|++|++.||++.|.+||.....+..- ..+... .-.+|...+..+.++|.+|
T Consensus 183 cgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etY----krI~k~--~~~~p~~is~~a~dlI~~l 256 (281)
T KOG0580|consen 183 CGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETY----KRIRKV--DLKFPSTISGGAADLISRL 256 (281)
T ss_pred ecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHH----HHHHHc--cccCCcccChhHHHHHHHH
Confidence 8999999999999999999999999999999999999988765422221 111111 1234566778999999999
Q ss_pred ccCCCCCCCChHHHHHHHH
Q 011353 293 LQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 293 l~~~p~~Rps~~~il~~L~ 311 (488)
+..+|.+|.+..++++|-.
T Consensus 257 l~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 257 LVKNPIERLALTEVMDHPW 275 (281)
T ss_pred hccCccccccHHHHhhhHH
Confidence 9999999999999998843
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-44 Score=340.76 Aligned_cols=243 Identities=18% Similarity=0.183 Sum_probs=203.1
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|++++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 567788899999999999994 4688999999864321 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-Ccc
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~ 212 (488)
|+++|+|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 82 YVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSK-EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 9999999999965 34689999999999999999999998 9999999999999999999999999998865543 234
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.|++.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+..+.+++.+|
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG------KLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CcCCCccCCHHHHHHHHHH
Confidence 6889999999999888999999999999999999999988654322211111111 1123334567899999999
Q ss_pred ccCCCCCCCC-----hHHHHHH
Q 011353 293 LQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 293 l~~~p~~Rps-----~~~il~~ 309 (488)
|+.||.+||+ +.++++|
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred cCCCHHHccCCccCCHHHHhcC
Confidence 9999999995 8888877
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-44 Score=325.11 Aligned_cols=251 Identities=21% Similarity=0.326 Sum_probs=202.1
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCC--CCCccHHHHHHHHHHHhccCCCCcccEEEEEee-----CCeeEE
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNR--SAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-----GDERLL 130 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~~~l 130 (488)
|..++.||.|+||.|..+. ..+|..||||++.. .+....++..+|+.+|+.++|+||+.+++++.. -+.+|+
T Consensus 24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYi 103 (359)
T KOG0660|consen 24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYL 103 (359)
T ss_pred ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEE
Confidence 3346788999999999999 67899999999983 344457788999999999999999999999865 356899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~-- 208 (488)
|+|+|+. +|...++. ++.++...+..+++|+++||+|+|+. +++||||||+|+|++.+..+||+|||+|+....
T Consensus 104 V~elMet-DL~~iik~--~~~L~d~H~q~f~YQiLrgLKyiHSA-nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~ 179 (359)
T KOG0660|consen 104 VFELMET-DLHQIIKS--QQDLTDDHAQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF 179 (359)
T ss_pred ehhHHhh-HHHHHHHc--CccccHHHHHHHHHHHHHhcchhhcc-cccccccchhheeeccCCCEEeccccceeeccccC
Confidence 9999954 89999964 44599999999999999999999998 999999999999999999999999999998742
Q ss_pred ----CCccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhh-------------------HHHhhcc
Q 011353 209 ----GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------------------DLIRDRN 264 (488)
Q Consensus 209 ----~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------------------~~~~~~~ 264 (488)
.+.+..|.+|+|||++.. ..||...||||.|||+.||++|+..|++... ..+....
T Consensus 180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ 259 (359)
T KOG0660|consen 180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK 259 (359)
T ss_pred cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence 145677999999999875 5699999999999999999999998886411 0011000
Q ss_pred ----ccccc---cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhhh
Q 011353 265 ----IQTLT---DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ 314 (488)
Q Consensus 265 ----~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~ 314 (488)
+..+. .......+ +..++.+.+|+.+||..||.+|+|+.+.++| |....
T Consensus 260 ar~yi~slp~~p~~~f~~~f-p~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~h 317 (359)
T KOG0660|consen 260 ARPYIKSLPQIPKQPFSSIF-PNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYH 317 (359)
T ss_pred HHHHHHhCCCCCCCCHHHHc-CCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhc
Confidence 00000 00001112 2456889999999999999999999999998 44443
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-44 Score=306.26 Aligned_cols=255 Identities=19% Similarity=0.184 Sum_probs=208.9
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCC-----eeE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERL 129 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 129 (488)
=.+|++.++||+|+|+.||+++ ..++..+|+|++......+.+..++|++..++++||||++++++...+. ..|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 3588999999999999999999 7789999999998877777888999999999999999999998875443 489
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccCcceeeCCCCCeeeecCCCccc
Q 011353 130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
|+++|...|||.+.+... ++..+++.+++.|+.+|++||++||+. . +.||||||.|||+++.+.++|.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 999999999999999753 344689999999999999999999998 5 99999999999999999999999999875
Q ss_pred cCCC-------------CccccCCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccc
Q 011353 206 SRDG-------------RSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT 269 (488)
Q Consensus 206 ~~~~-------------~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 269 (488)
..-. .....|..|+|||.+. +...+.++|||||||+||.|+.|..||.-... ..+.+.-.+
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLAv 255 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALAV 255 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEee
Confidence 4321 1234689999999986 45588999999999999999999998853211 222222111
Q ss_pred cc-cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 270 DS-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 270 ~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
.. ...-.-....++.+.+++.+|++.||.+||++.+++.+++.+.
T Consensus 256 ~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 256 QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11 1111111236789999999999999999999999999987653
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=365.84 Aligned_cols=252 Identities=24% Similarity=0.380 Sum_probs=206.2
Q ss_pred ccccccCCCCCCCeEEEEEeCC--C----CEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKLEN--Q----FRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~--~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..+...||+|.||.||.|...+ + ..||||.+++.. .+...+|++|..+|+.++|||||+++|+|.+....+|+
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ 773 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLIL 773 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEE
Confidence 3455678999999999999533 3 349999998764 34567899999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 132 AEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
+|||+||+|..||++.. ...++....+.++.|||+|+.||+++ ++|||||.++|+|++....|||+|||+|+..
T Consensus 774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~-~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK-HFVHRDLAARNCLLDERRVVKIADFGLARDI 852 (1025)
T ss_pred ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC-CCcCcchhhhheeecccCcEEEcccchhHhh
Confidence 99999999999998641 34588999999999999999999999 9999999999999999999999999999955
Q ss_pred CCCCcc------ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh-hHHHhhccccccccccccCCCCh
Q 011353 207 RDGRSY------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSS 279 (488)
Q Consensus 207 ~~~~~~------~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
.....+ .-...|||||.+..+.++.|+|||||||+|||++|...+|+... ...+. ..+.... +-..|.
T Consensus 853 y~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~----~~~~~gg-RL~~P~ 927 (1025)
T KOG1095|consen 853 YDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL----LDVLEGG-RLDPPS 927 (1025)
T ss_pred hhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH----HHHHhCC-ccCCCC
Confidence 443222 22468999999999999999999999999999999665444331 11111 0011111 223456
Q ss_pred HHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 280 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 280 ~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.++..+.++|..||+.+|++||++..|++.+..+...
T Consensus 928 ~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 928 YCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 6888999999999999999999999999988877654
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=342.80 Aligned_cols=246 Identities=17% Similarity=0.199 Sum_probs=203.6
Q ss_pred CCCcccccccCCCCCCCeEEEEEeC-C-CCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLE-N-QFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
.+.+|.+++.||+|+||.||+|... + +..||+|++.... ......+.+|+.++..++||||+++++++.+.+..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 3456788899999999999999843 3 3689999986432 223456889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++|+|.+++.. .+.+++..+..++.|++.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 108 lv~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSL-NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 99999999999999965 34689999999999999999999999 9999999999999999999999999999865443
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
....||+.|+|||++.+..++.++|||||||++|||++|..||................ ..++...+..+.++
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~l 258 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI------IYFPKFLDNNCKHL 258 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHHH
Confidence 34568999999999998889999999999999999999999887643222211111111 11234456778999
Q ss_pred HHHhccCCCCCCC-----ChHHHHHH
Q 011353 289 ASRCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rp-----s~~~il~~ 309 (488)
+.+||+.||.+|+ +++++++|
T Consensus 259 i~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 259 MKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 9999999999995 78888766
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=341.21 Aligned_cols=249 Identities=17% Similarity=0.162 Sum_probs=204.4
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|.+++.||.|+||.||+|.. .+++.||||+++... ......+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 577888999999999999995 468899999997532 1234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-Ccc
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~ 212 (488)
|+++|+|.+++.. .+.+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 82 YVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHEL-GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 9999999999964 34689999999999999999999998 9999999999999999999999999998765442 345
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc--cccccccccccCCCChHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR--NIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
.+|+.|+|||++.+..++.++|||||||++|||++|..||........... ..................+.++.+++.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~ 238 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLIT 238 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHH
Confidence 689999999999988999999999999999999999998865432221110 001111110000011235678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||..+|.+|||+.+++++
T Consensus 239 ~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHhhChhhhcCCHHHHHhC
Confidence 9999999999999999987
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=324.41 Aligned_cols=245 Identities=17% Similarity=0.228 Sum_probs=212.4
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHH---HHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDAR---QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~---~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.+|++.+.||+|.||.|-++. ...|+.||||.|+++...+.. .+.+||++|..|+||||+.++.+|+..+.+.|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 367888999999999999999 678999999999987665544 4788999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
||..+|.|.+++.+ .+.+++.....++.||..|+.|+|.+ +++|||||.+|||+|+++++||+|||++....+.
T Consensus 133 EYaS~GeLYDYiSe--r~~LsErEaRhfFRQIvSAVhYCHkn-rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL 209 (668)
T KOG0611|consen 133 EYASGGELYDYISE--RGSLSEREARHFFRQIVSAVHYCHKN-RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL 209 (668)
T ss_pred EecCCccHHHHHHH--hccccHHHHHHHHHHHHHHHHHHhhc-cceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence 99999999999975 45699999999999999999999998 9999999999999999999999999998876655
Q ss_pred CccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
.+.+|++-|.+||.+.|.+| .+.+|.|||||+||-|+.|.-||.+.....+..+...... ..+..+.++.-|
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY-------rEP~~PSdA~gL 282 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY-------REPETPSDASGL 282 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc-------cCCCCCchHHHH
Confidence 46789999999999999887 5689999999999999999999987654433322211111 122345678999
Q ss_pred HHHhccCCCCCCCChHHHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L~ 311 (488)
|.+||..+|++|.|+.+|..|.+
T Consensus 283 IRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred HHHHHhcCcccchhHHHHhhhhe
Confidence 99999999999999999999865
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=345.18 Aligned_cols=251 Identities=21% Similarity=0.309 Sum_probs=199.9
Q ss_pred cccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
++++.+.||.|+||.||+|+. .++..||||+++.... ...+.+.+|+.++..+ +||||++++++|.+.+..+
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~ 115 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL 115 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence 466778889999999999973 2466899999975432 2345688999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC-------------------------------------------------------------
Q 011353 130 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 148 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~------------------------------------------------------------- 148 (488)
+||||+++|+|.+++....
T Consensus 116 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (375)
T cd05104 116 VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYI 195 (375)
T ss_pred eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceec
Confidence 9999999999999986421
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc-----
Q 011353 149 ------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----- 211 (488)
Q Consensus 149 ------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~----- 211 (488)
...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.......
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 274 (375)
T cd05104 196 DQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG 274 (375)
T ss_pred ccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence 12478899999999999999999998 999999999999999999999999999876543321
Q ss_pred -cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 212 -YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 212 -~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
..++..|+|||++.+..++.++|||||||++|||+| |..||.....+.... ...........+...+.++.+|+
T Consensus 275 ~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li 350 (375)
T cd05104 275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFY----KMIKEGYRMLSPECAPSEMYDIM 350 (375)
T ss_pred CCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHH----HHHHhCccCCCCCCCCHHHHHHH
Confidence 223467999999999999999999999999999998 776665432111000 00111111112223456899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhh
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+||+.||++|||+.+|++.|+..
T Consensus 351 ~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 351 KSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHccCChhHCcCHHHHHHHHHhh
Confidence 999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=333.81 Aligned_cols=254 Identities=21% Similarity=0.289 Sum_probs=198.1
Q ss_pred CcccccccCCCCCCCeEEEEEeCC-----------------CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN-----------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANL 118 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l 118 (488)
.+|.+.++||+|+||.||+|.+.+ +..||+|.+...... ....|.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 356778889999999999997532 346999999765332 24569999999999999999999
Q ss_pred EEEEeeCCeeEEEEecCCCCCHHhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 011353 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE-----------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181 (488)
Q Consensus 119 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~D 181 (488)
++++.+.+..++||||+++|+|.+++.... ...+++..+++++.||+.||.|||+. +++|||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~ivH~d 163 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-NFVHRD 163 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-CccccC
Confidence 999999999999999999999999885421 12468889999999999999999998 999999
Q ss_pred ccCcceeeCCCCCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhC--CCCCC
Q 011353 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG--KHIPP 253 (488)
Q Consensus 182 lkp~Nill~~~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg--~~p~~ 253 (488)
|||+|||++.++.+||+|||+++...... ...++..|+|||++.++.++.++|||||||++|||+++ ..|+.
T Consensus 164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 243 (304)
T cd05096 164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG 243 (304)
T ss_pred cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence 99999999999999999999987654321 22346789999999988899999999999999999975 34444
Q ss_pred chhhHHHhhccccccc--cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 254 SHALDLIRDRNIQTLT--DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 254 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
................ ........+..++..+.+|+.+||+.+|.+|||+.+|.+.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 244 ELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred cCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 3221111110000000 000011123345678999999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-43 Score=319.27 Aligned_cols=255 Identities=17% Similarity=0.205 Sum_probs=203.0
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCC-cccEEEEEeeCC------
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRR-LANLLGCCCEGD------ 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~------ 126 (488)
..|..++++|+|+||+||+|. ..+|+.||+|+++.... .-.....+|+.+|+.|+|+| ||++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 456667778999999999999 67889999999986543 23445789999999999999 999999998877
Q ss_pred eeEEEEecCCCCCHHhhhccCCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
..++||||++. +|..++..... +.++...+..++.||+.||.|||++ +|+||||||.||||+++|.+||+|||+|+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~-~IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH-GILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCcceEEECCCCcEeeeccchHH
Confidence 78999999966 89999976443 3578889999999999999999999 99999999999999999999999999998
Q ss_pred ccCCC----CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh--------h---cccccc
Q 011353 205 NSRDG----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR--------D---RNIQTL 268 (488)
Q Consensus 205 ~~~~~----~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--------~---~~~~~~ 268 (488)
...-. ++..+|..|+|||++.+. .|+...||||+||++.||++++..|++...-... . ..+..+
T Consensus 169 a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v 248 (323)
T KOG0594|consen 169 AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV 248 (323)
T ss_pred HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence 65522 445678999999999987 5999999999999999999999888865321110 0 011111
Q ss_pred c---ccc--ccCCC-C-------hHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhh
Q 011353 269 T---DSC--LEGQF-S-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTL 313 (488)
Q Consensus 269 ~---~~~--~~~~~-~-------~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~ 313 (488)
. +.. ..... + +....+..+++.+||+.+|..|.|+..++.| +..+
T Consensus 249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 0 000 00000 1 1122579999999999999999999999998 4444
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-43 Score=338.81 Aligned_cols=237 Identities=18% Similarity=0.238 Sum_probs=198.4
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
.||+|+||.||++. ..+++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 46999999999999 4578999999997542 2234568899999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----CccccC
Q 011353 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTN 215 (488)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~~ 215 (488)
|.+++.. .+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 82 L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSG-KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 9998864 34689999999999999999999998 9999999999999999999999999998753221 234688
Q ss_pred CCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccC
Q 011353 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (488)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (488)
+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+.++.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------DIKFPRTLSADAKSLLSGLLIK 232 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC------CccCCCCCCHHHHHHHHHHcCC
Confidence 9999999999888999999999999999999999988654332222111111 1123445667899999999999
Q ss_pred CCCCCC-----ChHHHHHH
Q 011353 296 EPRERP-----NPRSLVTA 309 (488)
Q Consensus 296 ~p~~Rp-----s~~~il~~ 309 (488)
||.+|| ++.+++++
T Consensus 233 dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CHHHcCCCCCCCHHHHhcC
Confidence 999997 88998876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=326.54 Aligned_cols=250 Identities=19% Similarity=0.274 Sum_probs=202.8
Q ss_pred CcccccccCCCCCCCeEEEEEeC----CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..+++.+.||+|+||.||+|.+. .+..||+|.++..... ....|.+|+.++..++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45677788899999999999842 3578999999865322 245689999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||+++|+|.+++... ...+++..++.++.||+.||.|||+. +++||||||+||+++.++.++++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~-~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~ 162 (266)
T cd05064 85 TEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI 162 (266)
T ss_pred EEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence 9999999999999653 34689999999999999999999998 99999999999999999999999999876533221
Q ss_pred ----ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 211 ----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
...++..|+|||++.+..++.++|||||||++||+++ |..||............... .....+..++..+
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 237 (266)
T cd05064 163 YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-----FRLPAPRNCPNLL 237 (266)
T ss_pred hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-----CCCCCCCCCCHHH
Confidence 1233568999999998999999999999999999875 88877643322111111110 1112234466789
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+++..||+.+|.+|||+.+|++.|..+
T Consensus 238 ~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 238 HQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 9999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-43 Score=345.41 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=201.5
Q ss_pred cccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
++.+.+.||+|+||.||+|.. .++..||||+++..... ....+.+|+.+++.+ +|+||++++++|...+..+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 566778889999999999873 22457999999764332 245688999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC-------------------------------------------------------------
Q 011353 130 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 148 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~------------------------------------------------------------- 148 (488)
+||||+++|+|.+++....
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 9999999999999985321
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC------ccccC
Q 011353 149 -------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTN 215 (488)
Q Consensus 149 -------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~------~~~~~ 215 (488)
..++++..+++++.||+.||.|||++ +++||||||+|||+++++.+||+|||+++...... ...++
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~ 277 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence 12478889999999999999999998 99999999999999999999999999987654322 12235
Q ss_pred CCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
+.|+|||++.+..++.++|||||||++|||++ |+.||+........ ............+...+.++.+++.+||+
T Consensus 278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 353 (374)
T cd05106 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKF----YKMVKRGYQMSRPDFAPPEIYSIMKMCWN 353 (374)
T ss_pred cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHH----HHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence 67999999998889999999999999999997 88887654221110 01111111111222346789999999999
Q ss_pred CCCCCCCChHHHHHHHHhhh
Q 011353 295 YEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 295 ~~p~~Rps~~~il~~L~~~~ 314 (488)
.||.+|||+.++++.|+.+.
T Consensus 354 ~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 354 LEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CChhhCcCHHHHHHHHHHHh
Confidence 99999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-43 Score=337.12 Aligned_cols=236 Identities=18% Similarity=0.203 Sum_probs=196.2
Q ss_pred CCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
||+|+||.||++.. .+++.||+|+++... ......+.+|+.++..++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 59999999999994 568899999986432 22345688999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----CccccCC
Q 011353 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL 216 (488)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~~~ 216 (488)
.+++.. .+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ....||+
T Consensus 81 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQR--EGRFDLSRARFYTAELLCALENLHKF-NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 999965 34689999999999999999999998 9999999999999999999999999998753221 2346899
Q ss_pred CCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCC
Q 011353 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (488)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 296 (488)
.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...+..+.+++.+||+.|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE------PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcCCC
Confidence 999999999988999999999999999999999998765433222211111 11234446678999999999999
Q ss_pred CCCCCC---hHHHHHH
Q 011353 297 PRERPN---PRSLVTA 309 (488)
Q Consensus 297 p~~Rps---~~~il~~ 309 (488)
|.+||+ +.+++.|
T Consensus 232 p~~R~~~~~~~e~l~h 247 (312)
T cd05585 232 PTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHcCCCCCHHHHHcC
Confidence 999985 5666655
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-43 Score=338.33 Aligned_cols=237 Identities=18% Similarity=0.239 Sum_probs=197.3
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
.||+|+||.||++. ..+|..||+|+++... ......+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 46999999999999 4578999999997532 1234467889999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----CccccC
Q 011353 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTN 215 (488)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~~ 215 (488)
|..++.. ...+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||++...... ....+|
T Consensus 82 L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 82 LFFHLSR--ERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 9998864 34689999999999999999999998 9999999999999999999999999998753221 234578
Q ss_pred CCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccC
Q 011353 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (488)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (488)
+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...++.+.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999889999999999999999999999988654332221111111 1123444667899999999999
Q ss_pred CCCCCC-----ChHHHHHH
Q 011353 296 EPRERP-----NPRSLVTA 309 (488)
Q Consensus 296 ~p~~Rp-----s~~~il~~ 309 (488)
||.+|| ++.+++++
T Consensus 233 dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CHHHhCCCCCCCHHHHHcC
Confidence 999998 78888876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=323.48 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=207.7
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..+++++++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++.+.+.+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 35678889999999999999998788889999987543 23567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----- 210 (488)
++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence 999999999765556689999999999999999999998 99999999999999999999999999998654432
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...++..|+|||++.+..++.++|||||||++|+|+| |..||................. .......+..+.+++
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li 237 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR-----MPRMENCPDELYDIM 237 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-----CCCCCCCCHHHHHHH
Confidence 1234567999999998889999999999999999999 8877765432222111111111 111223557899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhh
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+||..+|++|||+.++.+.|+.+
T Consensus 238 ~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 238 KTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHccCCcccCcCHHHHHHHHhcC
Confidence 999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=323.50 Aligned_cols=250 Identities=22% Similarity=0.338 Sum_probs=207.1
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.++.+.+.||.|+||.||+|. ..++..||+|.+.... .....+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 345667788999999999999 4568899999987543 34567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc----
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---- 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~---- 211 (488)
++++|.+++.......+++..+..++.|++.||.|||++ +++||||||+||++++++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~ 163 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 163 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence 999999999765555689999999999999999999998 999999999999999999999999999876554321
Q ss_pred -cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 212 -YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 212 -~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+..|+|||.+.+..++.++|||||||++|||+| |..|++....+........ ......+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li 238 (263)
T cd05052 164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----GYRMERPEGCPPKVYELM 238 (263)
T ss_pred CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-----CCCCCCCCCCCHHHHHHH
Confidence 123567999999998899999999999999999998 8877765433222111111 111223444667899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhh
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+||+.+|++|||+.++++.|+.+
T Consensus 239 ~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 239 RACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHccCCcccCCCHHHHHHHHHhh
Confidence 999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=336.06 Aligned_cols=251 Identities=19% Similarity=0.267 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.+|++++.||.|+||.||++.. .++..+|+|.+...... ....+.+|+++++.++||||++++++|.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 4677888999999999999995 46889999998754322 245689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--Ccc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY 212 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~~ 212 (488)
+++|+|.+++.. .+.+++..+..++.|++.||.|||+..+++|+||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 162 (333)
T cd06650 85 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (333)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence 999999999965 3458999999999999999999997547999999999999999999999999998754332 334
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc-------ccc-------------------
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-------NIQ------------------- 266 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-------~~~------------------- 266 (488)
.++..|+|||++.+..++.++|||||||++|+|++|+.||........... ...
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
T cd06650 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG 242 (333)
T ss_pred CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhc
Confidence 678999999999988899999999999999999999988764322111100 000
Q ss_pred ----------cccccccc---CCCC-hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 267 ----------TLTDSCLE---GQFS-SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 267 ----------~~~~~~~~---~~~~-~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+.... ...+ ...+.++.+|+.+||+.||++|||+.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 243 PDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred ccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 00000000 0000 1135679999999999999999999999987
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-43 Score=321.34 Aligned_cols=251 Identities=18% Similarity=0.189 Sum_probs=208.5
Q ss_pred cCCCcccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
-+++..++++.||.|.-|+||++... ++..+|+|++.+.... ...+...|-+||+.++||.++.|++.|+.+...+
T Consensus 74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~c 153 (459)
T KOG0610|consen 74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSC 153 (459)
T ss_pred cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeE
Confidence 35677889999999999999999954 4689999999875433 2445777999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC--
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-- 207 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~-- 207 (488)
++||||+||+|..++++..++.+++..+..++.+|+-||+|||-. |||+|||||+||||-++|++.|+||.|+....
T Consensus 154 l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml-GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 154 LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML-GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh-ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 999999999999999988888899999999999999999999999 99999999999999999999999999853210
Q ss_pred --------------------------------C-C-------------------------CccccCCCCCCccccccCCC
Q 011353 208 --------------------------------D-G-------------------------RSYSTNLAFTPPEYLRTGRV 229 (488)
Q Consensus 208 --------------------------------~-~-------------------------~~~~~~~~y~aPE~~~~~~~ 229 (488)
. . .+.+||-.|.|||++.|...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 01245778999999999999
Q ss_pred CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCC----hHH
Q 011353 230 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN----PRS 305 (488)
Q Consensus 230 ~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~ 305 (488)
+.++|.|+|||+||||+.|..||.+...+.... .++...+.-...+..+..+.+||+++|.+||.+|.. +.|
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~----NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~e 388 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLR----NIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAE 388 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHH----HHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHH
Confidence 999999999999999999999998765433222 222221111112256788999999999999999987 666
Q ss_pred HHHH
Q 011353 306 LVTA 309 (488)
Q Consensus 306 il~~ 309 (488)
|-+|
T Consensus 389 IK~H 392 (459)
T KOG0610|consen 389 IKRH 392 (459)
T ss_pred hhcC
Confidence 6665
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-42 Score=327.62 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=204.7
Q ss_pred CcccccccCCCCCCCeEEEEEeCC-C-----CEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN-Q-----FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
.++++++.||+|+||.||+|.... + ..||+|.++..... ....|.+|+.++..++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467788899999999999998532 2 57999999754432 2456899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCe
Q 011353 130 LVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (488)
++|||+++++|.+++..... ..+++..++.++.|++.||.|||+. +++|+||||+||++++++.+
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTV 163 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccccceEEEcCCCcE
Confidence 99999999999999965321 4588899999999999999999998 99999999999999999999
Q ss_pred eeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccc
Q 011353 196 RLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTL 268 (488)
Q Consensus 196 kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 268 (488)
+|+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.............
T Consensus 164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~--- 240 (283)
T cd05048 164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIR--- 240 (283)
T ss_pred EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---
Confidence 99999998764322 12334678999999998889999999999999999998 888876533222211111
Q ss_pred ccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.......+...+.++.+|+.+||+.||.+||++.+|+++|+.+
T Consensus 241 --~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 241 --SRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred --cCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1111123445678999999999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=324.23 Aligned_cols=250 Identities=22% Similarity=0.369 Sum_probs=209.5
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
+|.+++.||.|+||.||+|...++..+|+|++..........+.+|+.+++.++|+||+++++++.+....++||||+++
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK 86 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence 46777888999999999999777899999999876654567799999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----ccc
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SYS 213 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----~~~ 213 (488)
++|.+++.+.....+++..+..++.||+.||.|||+. +++|+||||+||++++++.+||+|||++....... ...
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 165 (261)
T cd05148 87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK 165 (261)
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence 9999999875566789999999999999999999998 99999999999999999999999999987654332 223
Q ss_pred cCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 214 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
++..|++||.+.+..++.++||||||+++|+|++ |+.||............. .......+...+..+.+++.+|
T Consensus 166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~ 240 (261)
T cd05148 166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-----AGYRMPCPAKCPQEIYKIMLEC 240 (261)
T ss_pred CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-----hCCcCCCCCCCCHHHHHHHHHH
Confidence 4567999999988889999999999999999999 777775433221111111 1111122344667899999999
Q ss_pred ccCCCCCCCChHHHHHHHHhh
Q 011353 293 LQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 293 l~~~p~~Rps~~~il~~L~~~ 313 (488)
|+.+|.+|||+.++++.|+.+
T Consensus 241 l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 241 WAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred cCCCchhCcCHHHHHHHHhcC
Confidence 999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=330.10 Aligned_cols=251 Identities=17% Similarity=0.232 Sum_probs=199.3
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
...|.+++.||.|+||.||+|.. .++..||+|.++.... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 45788889999999999999994 5688999999875432 234567899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++ +|.+++... ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~-~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 84 YLDS-DLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKR-KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred CCCc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence 9975 899988643 34588999999999999999999998 9999999999999999999999999998754322
Q ss_pred CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-----------cccc---------
Q 011353 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------IQTL--------- 268 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~~~~--------- 268 (488)
....+++.|+|||++.+ ..++.++|||||||++|+|+||+.||............ +..+
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY 240 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence 23456889999999875 45899999999999999999999888654322111000 0000
Q ss_pred ccccccC----CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 TDSCLEG----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 ~~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+.... ......+.++.+|+.+||+.||.+|||+.++++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 0011245678999999999999999999999876
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-42 Score=320.47 Aligned_cols=246 Identities=22% Similarity=0.338 Sum_probs=201.4
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
+++++++.||+|+||.||++.+.++..+|+|.+.... ....++.+|+.+++.++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4567888899999999999998777889999987443 235678999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----c
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-----~ 211 (488)
+|+|.+++.... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||+++...... .
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN-SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 999999986532 3589999999999999999999998 99999999999999999999999999987653321 1
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..++..|+|||++.+..++.++||||||+++|+|++ |+.||................ ....+...+..+.+++.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~li~ 235 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-----RLYRPKLASMTVYEVMY 235 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-----CCCCCCCCCHHHHHHHH
Confidence 223567999999998889999999999999999999 777765432221111111100 01112224567999999
Q ss_pred HhccCCCCCCCChHHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L 310 (488)
+||+.+|.+|||+.++++.|
T Consensus 236 ~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 236 SCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHccCCcccCcCHHHHHHhh
Confidence 99999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=339.04 Aligned_cols=249 Identities=18% Similarity=0.223 Sum_probs=203.3
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-C-----CCcccEEEEEeeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N-----RRLANLLGCCCEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 130 (488)
+|.+++.||+|+||.|.+|. ..+++.||||+++... .-..+-..|+.+|..|+ | -|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 66788999999999999999 6779999999998653 34566788999999996 5 389999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC--CCeeeecCCCccccCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--VNPRLSCFGLMKNSRD 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~--~~~kl~DfGla~~~~~ 208 (488)
|+|.+.. +|.++|+.+.-.+++...+..|+.||+.||.+||+. +|||+||||+||||.+- ..+||+|||.++....
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l-~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL-GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 9999955 999999988778899999999999999999999998 99999999999999543 3699999999988765
Q ss_pred C-CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH-H---------------hh-cccccccc
Q 011353 209 G-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-I---------------RD-RNIQTLTD 270 (488)
Q Consensus 209 ~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~---------------~~-~~~~~~~~ 270 (488)
. -.+..+..|+|||++.|.+|+.+.||||||||+.||++|.+.|+++.... + .. .......+
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~ 423 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFT 423 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehh
Confidence 4 35667899999999999999999999999999999999998887652110 0 00 00000000
Q ss_pred c-----------------------------cccCCCC-----------hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 S-----------------------------CLEGQFS-----------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 ~-----------------------------~~~~~~~-----------~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. ......| ......+.+++.+||.+||.+|+|+.++++|
T Consensus 424 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 424 SLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred ccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0 0000011 1234678999999999999999999999998
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=340.02 Aligned_cols=246 Identities=17% Similarity=0.171 Sum_probs=196.4
Q ss_pred CCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.+.++++++.||.|+||.||+|. ..+++.||||++...... ....+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 45677788899999999999999 457899999999654322 2456899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
||+++|+|.+.. ..++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 152 e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 152 EFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR-HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred ecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence 999999986543 356778889999999999999998 9999999999999999999999999998765432
Q ss_pred -CccccCCCCCCcccccc-----CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....||..|+|||++.. ...+.++|||||||++|||++|+.||.......+.... ... ........+...+.
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~ 302 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLM-CAI-CMSQPPEAPATASR 302 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHH-HHH-hccCCCCCCCccCH
Confidence 34568899999998753 22456899999999999999999988632111000000 000 00011122334567
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+|+.+||+.||++|||+.++++|
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 89999999999999999999999998
|
|
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=329.02 Aligned_cols=242 Identities=19% Similarity=0.241 Sum_probs=195.5
Q ss_pred CCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
||+|+||+||++. ..+++.||+|++...... ..+.+..|+.+++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 5999999999999 457889999998753222 234578899999999999999999999999999999999999999
Q ss_pred HhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccccc
Q 011353 141 AKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST 214 (488)
Q Consensus 141 ~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~ 214 (488)
.+++... ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.++|+|||++...... ....+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 9887432 234689999999999999999999998 9999999999999999999999999998765433 23467
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|+|++|+.||................... ...++...+..+.+++.+||+
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~ 237 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLA 237 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999886432111110011111111 112334467789999999999
Q ss_pred CCCCCCC-----ChHHHHHH
Q 011353 295 YEPRERP-----NPRSLVTA 309 (488)
Q Consensus 295 ~~p~~Rp-----s~~~il~~ 309 (488)
.||++|| ++.++++|
T Consensus 238 ~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 238 KDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHhcCCCCCCHHHHhcC
Confidence 9999999 66777776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=326.67 Aligned_cols=243 Identities=16% Similarity=0.204 Sum_probs=194.6
Q ss_pred CCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
||+|+||.||++. ..+|+.||+|++..... .....+..|+++++.++||||+++++++.+....++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 5999999999999 45689999999864321 1233466799999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC---ccccCCC
Q 011353 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---SYSTNLA 217 (488)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---~~~~~~~ 217 (488)
.+++.......+++..+..++.||+.||.|||+. +++||||||+||+++.++.++|+|||++....... ...++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 9988765555689999999999999999999998 99999999999999999999999999987654432 3457889
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCC
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 297 (488)
|+|||++.+..++.++|||||||++|||++|+.||.....+................ ......+.++.+++.+||+.||
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P 238 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKP 238 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCH
Confidence 999999998889999999999999999999998876432111110111111111000 0112356789999999999999
Q ss_pred CCCCChHHHHHH
Q 011353 298 RERPNPRSLVTA 309 (488)
Q Consensus 298 ~~Rps~~~il~~ 309 (488)
++||++.++++.
T Consensus 239 ~~R~~~~~~~~~ 250 (277)
T cd05607 239 EDRLGSREKNDD 250 (277)
T ss_pred hhCCCCccchhh
Confidence 999999776543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=351.08 Aligned_cols=247 Identities=18% Similarity=0.200 Sum_probs=203.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-CC-CCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-EN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
..|.+.+.||+|+||.||+|.. .+ +..||+|.+..........+.+|+.+|+.++|||||++++++...+..+|||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 3478888899999999999983 34 678999987655444445688899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 135 MPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
+++|+|.+++... ...++++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999999988542 345689999999999999999999998 9999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||................. ...+...+..+.
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~ 300 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-----DPFPCPVSSGMK 300 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCCccCCHHHH
Confidence 234589999999999988899999999999999999999998865433222211111111 112334567899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++.+||..+|+.|||+.+++.+
T Consensus 301 ~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 301 ALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHhccChhhCcCHHHHHhC
Confidence 99999999999999999999864
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=329.37 Aligned_cols=249 Identities=18% Similarity=0.226 Sum_probs=198.5
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+|++++.||+|+||.||++.. .+++.||||+++.... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 567888899999999999995 4688999999875432 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----- 209 (488)
++++++..+... ...+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 999877655432 34689999999999999999999998 9999999999999999999999999998865432
Q ss_pred CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh--c------------------cccccc
Q 011353 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD--R------------------NIQTLT 269 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~--~------------------~~~~~~ 269 (488)
....+++.|+|||++.+..++.++|||||||++|||++|+.||+......... . ......
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 23457899999999998889999999999999999999998887532111000 0 000000
Q ss_pred ccccc------CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 DSCLE------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 ~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+... .......+..+.+|+.+||+.||++|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 00111246779999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=341.69 Aligned_cols=247 Identities=17% Similarity=0.172 Sum_probs=197.3
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.|.+++.||+|+||+||+|. ..+++.||||++..... .....+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 46788899999999999998 56688999999975322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC-----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 208 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----- 208 (488)
|++||+|.+++.. ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++++||+|||+++....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKM-GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 9999999999965 34589999999999999999999998 999999999999999999999999998753210
Q ss_pred ----------------------------------------------CCccccCCCCCCccccccCCCCCCccchhhHHHH
Q 011353 209 ----------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL 242 (488)
Q Consensus 209 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 242 (488)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 0123588999999999988899999999999999
Q ss_pred HHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH--hccCCCCCCCChHHHHHH
Q 011353 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR--CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 243 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~~p~~Rps~~~il~~ 309 (488)
|||+||..||.............. .. ...........+.++.+++.+ |+..+|..||++.++++|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~-~~-~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVIN-WE-NTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHc-cc-cccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 999999998865432211111100 00 000001112346788999988 455566679999999987
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=328.51 Aligned_cols=248 Identities=17% Similarity=0.209 Sum_probs=202.2
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
|++++.||+|+||+||++.. .+++.||||++...... ....+.+|+.+++.++||||+++++.+.+.+..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 45667789999999999994 56889999998754322 234578899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC---c
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---S 211 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---~ 211 (488)
+++|+|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 9999999988654445699999999999999999999998 99999999999999999999999999987654332 2
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..+++.|+|||++.+..++.++|||||||++|+|++|+.||...............+. . ....++...+..+.+|+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVK-E-DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhh-h-cccccCcccCHHHHHHHHH
Confidence 4578899999999988899999999999999999999998865432111111111111 1 1112334466789999999
Q ss_pred hccCCCCCCC-----ChHHHHHH
Q 011353 292 CLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rp-----s~~~il~~ 309 (488)
||+.||.+|| ++.+++++
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999 78888776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-42 Score=338.62 Aligned_cols=247 Identities=12% Similarity=0.083 Sum_probs=195.3
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|++++.||+|+||+||++. ..+++.||||+++... ......+.+|+.++..++|+||+++++.+.+....++|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 46778888999999999998 4568899999997532 1223467889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|++||+|.+++.. .+.+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~-givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 82 FLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQL-GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 9999999999965 35699999999999999999999998 9999999999999999999999999998753211
Q ss_pred -----------------------------------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCc
Q 011353 210 -----------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254 (488)
Q Consensus 210 -----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 254 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 123688999999999988999999999999999999999999875
Q ss_pred hhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc--CCCCCCCChHHHHHH
Q 011353 255 HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ--YEPRERPNPRSLVTA 309 (488)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~~p~~Rps~~~il~~ 309 (488)
...................... ...+.++.+++.+++. .++..||++.+|++|
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPPE--VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCCc--CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 4322211111100000000000 1245678888887554 233356899999987
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=330.56 Aligned_cols=244 Identities=27% Similarity=0.455 Sum_probs=193.1
Q ss_pred ccccCCCCCCCeEEEEEeC-----CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 61 IVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+.+.||.|.||.||+|.+. .+..|+||.++..... ..+.|.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4567899999999999965 3578999999764332 367899999999999999999999999988889999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----- 209 (488)
+++|+|.++|.......+++..+..|+.||+.||.|||++ +++|+||+++||+++.++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999876456799999999999999999999998 9999999999999999999999999998876322
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
........|+|||.+.+..++.++||||||+++|||+| |+.|+.......+.... ........+..++..+.+
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 236 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-----KQGQRLPIPDNCPKDIYS 236 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-----HTTEETTSBTTSBHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccceeccchhHHHHH
Confidence 12334678999999998889999999999999999999 56666543222211111 111111233345678999
Q ss_pred HHHHhccCCCCCCCChHHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~L 310 (488)
++..||..+|++|||+.++++.|
T Consensus 237 li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 237 LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHhcC
Confidence 99999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=329.59 Aligned_cols=254 Identities=18% Similarity=0.266 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCC----EEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.+|++++.||+|+||.||+|.+ .++. .||||.++.... ...+++.+|+.+++.++||||++++|++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 3567788889999999999984 3343 489999975432 3356789999999999999999999999764 5789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
|+||+++|+|.+++... ...+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++......
T Consensus 86 v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~-~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 86 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEER-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred eeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEecCCCcEEEccccccccccCCC
Confidence 99999999999999753 34588999999999999999999998 99999999999999999999999999998654332
Q ss_pred c------cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 211 S------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 211 ~------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
. ..++..|+|||++.+..++.++|||||||++|||++ |..||.+.....+... .........+..++.
T Consensus 164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 238 (316)
T cd05108 164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEKGERLPQPPICTI 238 (316)
T ss_pred cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-----HhCCCCCCCCCCCCH
Confidence 1 123567999999998899999999999999999998 8877755332221111 001111111233556
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
.+.+++..||..+|.+|||+.+++..|..+.+.+.
T Consensus 239 ~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 239 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 89999999999999999999999999998876653
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=332.63 Aligned_cols=238 Identities=18% Similarity=0.241 Sum_probs=196.2
Q ss_pred ccCCCCCCCeEEEEEe----CCCCEEEEEEcCCCC----CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 63 SEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+.||+|+||.||++.. .+++.||||+++... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5679999999999984 357899999987532 12234578899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++|+|.+++.. .+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQ-GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 999999999965 34588899999999999999999998 9999999999999999999999999998753222 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||............... ....+...+..+.+++.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG------KLNLPPYLTPEARDLLK 232 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 345789999999999888999999999999999999999988654322211111111 11233445678999999
Q ss_pred HhccCCCCCCC-----ChHHHHHH
Q 011353 291 RCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rp-----s~~~il~~ 309 (488)
+||+.+|++|| ++.+++++
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhcC
Confidence 99999999999 78888776
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=336.35 Aligned_cols=237 Identities=19% Similarity=0.245 Sum_probs=197.1
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
.||+|+||.||++. ..++..||+|+++... ......+.+|+.++..++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 46999999999999 4578999999997532 1234567889999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccccc
Q 011353 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST 214 (488)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~ 214 (488)
|.+++.. .+.+++..+..++.||+.||.|||+ . |++||||||+|||++.++.+||+|||+++..... ....+
T Consensus 82 L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~-~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 82 LFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 9998864 3468999999999999999999997 6 9999999999999999999999999998753221 23468
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...++++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L~ 232 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLSGLLK 232 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHhh
Confidence 99999999999889999999999999999999999988654332222111111 112334456789999999999
Q ss_pred CCCCCCC-----ChHHHHHH
Q 011353 295 YEPRERP-----NPRSLVTA 309 (488)
Q Consensus 295 ~~p~~Rp-----s~~~il~~ 309 (488)
.||++|+ ++.++++|
T Consensus 233 ~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcC
Confidence 9999996 89999877
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=333.57 Aligned_cols=232 Identities=19% Similarity=0.242 Sum_probs=192.0
Q ss_pred cCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||+||+|.. .+++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 469999999999994 568899999987432 22345677888888877 6999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~ 214 (488)
+|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~-~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQK--SRRFDEARARFYAAEITSALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 99998865 34689999999999999999999998 999999999999999999999999999875322 123457
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|+|++|+.||................ ...+...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~~~L~ 232 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE------VVYPTWLSQDAVDILKAFMT 232 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHHHHHHHcc
Confidence 899999999998889999999999999999999999987654332222211110 11233456789999999999
Q ss_pred CCCCCCCChH
Q 011353 295 YEPRERPNPR 304 (488)
Q Consensus 295 ~~p~~Rps~~ 304 (488)
.||.+||++.
T Consensus 233 ~dP~~R~~~~ 242 (320)
T cd05590 233 KNPTMRLGSL 242 (320)
T ss_pred cCHHHCCCCC
Confidence 9999999983
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-42 Score=329.27 Aligned_cols=250 Identities=18% Similarity=0.203 Sum_probs=195.7
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.+|++++.||.|+||.||+|.. .+++.||||+++.... .....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 4678889999999999999995 4788999999975432 2234678999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+. ++|.+++... .+.+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++...... .
T Consensus 85 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 85 VH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQR-YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 96 5788887643 34589999999999999999999998 9999999999999999999999999998754322 2
Q ss_pred ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhh--HHHhh-----cc-----cc------ccccc
Q 011353 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIRD-----RN-----IQ------TLTDS 271 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~-----~~-----~~------~~~~~ 271 (488)
...+++.|+|||++.+. .++.++|||||||++|+|+||..||.+... +.... .. +. .....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 34568899999998754 578899999999999999999998865311 00000 00 00 00000
Q ss_pred cccCCCCh---------HHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 CLEGQFSS---------DEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 ~~~~~~~~---------~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
......+. ..+..+.+++.+||+.||.+|||+.++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000000 123578899999999999999999999976
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=341.20 Aligned_cols=246 Identities=15% Similarity=0.135 Sum_probs=198.5
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|.+++.||.|+||+||+|.. .+++.||||++.... ......+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 567788889999999999994 568999999997532 1234457889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++|+|.+++.. ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 82 YLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKL-GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 9999999999965 34699999999999999999999998 9999999999999999999999999998653211
Q ss_pred --------------------------------------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCC
Q 011353 210 --------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251 (488)
Q Consensus 210 --------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 251 (488)
....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 013478999999999988899999999999999999999998
Q ss_pred CCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCC---hHHHHHH
Q 011353 252 PPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA 309 (488)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps---~~~il~~ 309 (488)
|.............. .... .........++.+.+++.+|+. +|.+|++ +.+++++
T Consensus 239 f~~~~~~~~~~~i~~-~~~~-~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 239 FCSDNPQETYRKIIN-WKET-LQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCHHHHHHHHHc-CCCc-cCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 865432211111100 0000 0000111246789999999996 9999997 8888876
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-42 Score=338.58 Aligned_cols=253 Identities=21% Similarity=0.291 Sum_probs=202.2
Q ss_pred cccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 129 (488)
.+.+.+.||.|+||.||+|+.. .+..||||+++..... ..+.+.+|+.++..+. ||||++++++|.+.+..+
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~ 117 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIY 117 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceE
Confidence 5667788999999999999842 1346999999754332 2456999999999995 999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC-------------------------------------------------------------
Q 011353 130 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 148 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~------------------------------------------------------------- 148 (488)
|||||+++|+|.++|....
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T cd05105 118 IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEA 197 (400)
T ss_pred EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhh
Confidence 9999999999999885421
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCe
Q 011353 149 ---------------------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (488)
Q Consensus 149 ---------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (488)
...+++..+..++.||+.||.|||+. +++|+||||+|||++.++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dikp~Nill~~~~~~ 276 (400)
T cd05105 198 SKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK-NCVHRDLAARNVLLAQGKIV 276 (400)
T ss_pred hhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHhEEEeCCCEE
Confidence 12478888999999999999999998 99999999999999999999
Q ss_pred eeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccc
Q 011353 196 RLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTL 268 (488)
Q Consensus 196 kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 268 (488)
||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||+....+........
T Consensus 277 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~-- 354 (400)
T cd05105 277 KICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIK-- 354 (400)
T ss_pred EEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHh--
Confidence 999999987643321 2234578999999998889999999999999999997 8877765322111100000
Q ss_pred ccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.......+...+..+.+++.+||+.+|++|||+.+|.+.|+.+.+
T Consensus 355 --~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 355 --SGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred --cCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 001111233456789999999999999999999999999997654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=339.58 Aligned_cols=246 Identities=20% Similarity=0.198 Sum_probs=202.3
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|.+++.||+|+||+||+|.. .+++.||||+++... ......+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 567888899999999999995 468999999997532 1234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC---
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~--- 210 (488)
|+++++|.+++... +.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 82 YMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL-GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 99999999999753 5699999999999999999999998 99999999999999999999999999987654322
Q ss_pred ------------------------------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHH
Q 011353 211 ------------------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI 260 (488)
Q Consensus 211 ------------------------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 260 (488)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 34578999999999999999999999999999999999998875432221
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCC-hHHHHHH
Q 011353 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN-PRSLVTA 309 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-~~~il~~ 309 (488)
...... ..... ........++.+.+++..||. +|.+||+ +.+++++
T Consensus 239 ~~~i~~-~~~~~-~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 239 YNKIIN-WKESL-RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHhc-cCCcc-cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 111111 00000 000111246789999999997 9999999 9999987
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=318.50 Aligned_cols=249 Identities=21% Similarity=0.320 Sum_probs=205.7
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
.+++++.||.|++|.||+|...++..||||.++... ...+++.+|+.++++++||||+++++++...+..++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred heeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence 467778889999999999997777889999997644 2456799999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc--ccc-
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS--YST- 214 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~--~~~- 214 (488)
++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++........ ..+
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 164 (261)
T cd05068 86 GSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGA 164 (261)
T ss_pred CcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCC
Confidence 9999999764445689999999999999999999998 999999999999999999999999999876543211 112
Q ss_pred --CCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 215 --NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 215 --~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
+..|+|||++.+..++.++||||||+++|||+| |+.||............... .....+...+..+.+++.+
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 239 (261)
T cd05068 165 KFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-----YRMPCPPGCPKELYDIMLD 239 (261)
T ss_pred cCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHHHH
Confidence 357999999998889999999999999999999 88777654322211111111 0111233456789999999
Q ss_pred hccCCCCCCCChHHHHHHHHhh
Q 011353 292 CLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~~ 313 (488)
||+.+|.+||++.++++.|+.+
T Consensus 240 ~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 240 CWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HhhcCcccCCCHHHHHHHHhcC
Confidence 9999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=326.03 Aligned_cols=250 Identities=18% Similarity=0.218 Sum_probs=194.2
Q ss_pred cccccccCCCCCCCeEEEEEe-C-CCCEEEEEEcCCCCCc--cHHHHHHHHHHHhcc---CCCCcccEEEEEee-----C
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-E-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCE-----G 125 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~ 125 (488)
.|++++.||+|+||.||+|.. . ++..||||.++..... ....+.+|+.+++.+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 577888999999999999985 3 4688999998754322 234567788777766 69999999999852 4
Q ss_pred CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 126 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
...++||||++ ++|.+++.......+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 56899999996 5899999765555689999999999999999999998 999999999999999999999999999876
Q ss_pred cCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc--------ccc------
Q 011353 206 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------QTL------ 268 (488)
Q Consensus 206 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------~~~------ 268 (488)
.... ....+++.|+|||++.+..++.++|||||||++|||++|+.||............. ..+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 239 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence 5433 23457899999999998889999999999999999999998876532111100000 000
Q ss_pred cccccc-------CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 TDSCLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 ~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...... ....+..+..+.+++.+||+.||++|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000000 00112345678999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=323.34 Aligned_cols=249 Identities=22% Similarity=0.327 Sum_probs=203.7
Q ss_pred CcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
..|.+++.||+|+||.||+|... ++..||||.++..... ....+.+|+.+++.++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 35677888999999999999853 2478999999765443 3467999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeee
Q 011353 130 LVAEYMPNDTLAKHLFHWE------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 197 (488)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~kl 163 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKI 163 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeeccccccceEEEcCCCeEEE
Confidence 9999999999999996432 23478999999999999999999998 9999999999999999999999
Q ss_pred ecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccccc
Q 011353 198 SCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTD 270 (488)
Q Consensus 198 ~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 270 (488)
+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++ |..||................
T Consensus 164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~-- 241 (280)
T cd05049 164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR-- 241 (280)
T ss_pred CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--
Confidence 999998754321 22334678999999999999999999999999999999 888876533222211111111
Q ss_pred ccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 271 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
....+...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 242 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 242 ---LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred ---cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11122345678999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=330.00 Aligned_cols=253 Identities=22% Similarity=0.308 Sum_probs=209.4
Q ss_pred ccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccH-HHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
..+.++||+|-||.|.++...++.+||||+++.....+. ..|.+|+.+|.+|+|||||+++|+|..++.+++|+||+++
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn 619 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN 619 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence 346688999999999999998889999999998765554 6799999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCccc----
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS---- 213 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~---- 213 (488)
|+|.+|+..+....+......+|+.||+.||+||.+. ++|||||.+.|+|+|.++++||+|||+++....+..+.
T Consensus 620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~-nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr 698 (807)
T KOG1094|consen 620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL-NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR 698 (807)
T ss_pred CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh-chhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence 9999999876444445667788999999999999998 99999999999999999999999999999766554332
Q ss_pred --cCCCCCCccccccCCCCCCccchhhHHHHHHHHh--CCCCCCchhhHHHhhccccccccccccC---CCChHHHHHHH
Q 011353 214 --TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIRDRNIQTLTDSCLEG---QFSSDEGTELV 286 (488)
Q Consensus 214 --~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~ 286 (488)
-.+.|||||.+..++++.+||||+||+++||+++ ...|+.....+...+ ....+.+..... .-|.-++..+.
T Consensus 699 ~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vve-n~~~~~~~~~~~~~l~~P~~cp~~ly 777 (807)
T KOG1094|consen 699 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVE-NAGEFFRDQGRQVVLSRPPACPQGLY 777 (807)
T ss_pred eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHH-hhhhhcCCCCcceeccCCCcCcHHHH
Confidence 2589999999999999999999999999999866 445655433332222 112222221111 12445778899
Q ss_pred HHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 287 RLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
++|..||..+-.+|||++++..+|++.
T Consensus 778 elml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 778 ELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 999999999999999999999998764
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=332.38 Aligned_cols=241 Identities=19% Similarity=0.283 Sum_probs=195.7
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHH---hccCCCCcccEEEEEeeCCeeEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAV---GQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
|++++.||+|+||.||+|. ..+++.||||+++... ....+.+.+|+.++ +.++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 4677889999999999999 4568999999997432 12234566676655 566799999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC---
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 208 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~--- 208 (488)
|||+++|+|..++. ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHEN-KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 99999999998884 34699999999999999999999998 999999999999999999999999999875322
Q ss_pred -CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 209 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 209 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
.....+++.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+..+.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ 230 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSREAIS 230 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHH
Confidence 12346789999999999888999999999999999999999988754332222111110 11233445678999
Q ss_pred HHHHhccCCCCCCC-----ChHHHHHH
Q 011353 288 LASRCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rp-----s~~~il~~ 309 (488)
++.+||+.||.+|| ++.+++++
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 99999999999999 57777765
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=318.32 Aligned_cols=247 Identities=23% Similarity=0.345 Sum_probs=202.3
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.++.+++.||+|+||.||++...++..+|||.+.... .....+.+|+.++..++||||+++++++.+.+..++||||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4577888999999999999997777779999987543 235679999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc-----
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----- 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~----- 211 (488)
+|+|.+++.... ..+++..++.++.||+.||.|||+. +++|+||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 83 NGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 999999996533 3689999999999999999999998 999999999999999999999999999876543321
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..++..|++||++.+..++.++|||||||++|+|+| |..||................. ...+...+..+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~ 235 (256)
T cd05113 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR-----LYRPHLASEKVYAIMY 235 (256)
T ss_pred CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC-----CCCCCCCCHHHHHHHH
Confidence 223567999999998889999999999999999999 8877654322211111111111 1112234578999999
Q ss_pred HhccCCCCCCCChHHHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~ 311 (488)
+||+.+|.+|||+.+++..|+
T Consensus 236 ~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 236 SCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHcCCCcccCCCHHHHHHhhC
Confidence 999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=322.47 Aligned_cols=251 Identities=22% Similarity=0.343 Sum_probs=202.2
Q ss_pred CCcccccccCCCCCCCeEEEEEe-----CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
++++++++.||+|+||.||+|.. .++..||+|.+..... .....+.+|+.+++.++||||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 45678889999999999999983 2457899999975432 23456889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWE---------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (488)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||++ +++|+||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-CeehhccccceEEEcCCCc
Confidence 9999999999999985321 23478899999999999999999998 9999999999999999999
Q ss_pred eeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccc
Q 011353 195 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 267 (488)
Q Consensus 195 ~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 267 (488)
+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++ |..||.+.............
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 242 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR 242 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998764322 22234567999999988889999999999999999999 77776543222111111111
Q ss_pred cccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHh
Q 011353 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 312 (488)
. ....+...+..+.+++.+||+.+|.+||++.+|+++|..
T Consensus 243 ~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 243 Q-----LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred C-----cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 111233456789999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=319.18 Aligned_cols=255 Identities=16% Similarity=0.197 Sum_probs=206.4
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
++|.+.+.||.|+||.||+|. ..++..||||.++.... .....+.+|+.+++.++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 456778888999999999999 55789999998764322 22446889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 133 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
||+++|+|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 999999999988532 234588999999999999999999998 99999999999999999999999999987654332
Q ss_pred ----ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 211 ----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
...+++.|+|||.+.+..++.++||||||+++|+|++|+.||.....+..... ..+.............+..+.
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08228 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLC--QKIEQCDYPPLPTEHYSEKLR 238 (267)
T ss_pred HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHH--HHHhcCCCCCCChhhcCHHHH
Confidence 34577899999999988899999999999999999999988764322111000 000000011112234567899
Q ss_pred HHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 287 RLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
+++.+||..+|++|||+.++++.|++++
T Consensus 239 ~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 239 ELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 9999999999999999999999998874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-42 Score=331.98 Aligned_cols=243 Identities=19% Similarity=0.233 Sum_probs=197.7
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCC-CCcccEEEEEeeCCeeEEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 132 (488)
+|++++.||+|+||.||+|.. .+++.||||++.... ....+.+..|+.++..+.| ++|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 367788899999999999994 567899999987532 2235568889999999975 56888999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~---- 208 (488)
||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 99999999999864 34589999999999999999999998 999999999999999999999999999874321
Q ss_pred CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 209 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...+..+.++
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~l 231 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSI 231 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHH
Confidence 12345789999999999988999999999999999999999988654322221111111 112344466789999
Q ss_pred HHHhccCCCCCCCCh-----HHHHHH
Q 011353 289 ASRCLQYEPRERPNP-----RSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rps~-----~~il~~ 309 (488)
+.+||..||.+|++. .+++++
T Consensus 232 i~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 232 CKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999999986 555554
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-42 Score=338.54 Aligned_cols=246 Identities=15% Similarity=0.111 Sum_probs=196.4
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|.+++.||.|+||.||++. ..+++.||||++.... ......+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 46778889999999999998 5678999999986432 1224568889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++|+|.+++.. .+.+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 82 FLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKL-GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 9999999999965 35689999999999999999999998 9999999999999999999999999998632110
Q ss_pred -----------------------------------------------CccccCCCCCCccccccCCCCCCccchhhHHHH
Q 011353 210 -----------------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL 242 (488)
Q Consensus 210 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 242 (488)
....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 013578999999999988899999999999999
Q ss_pred HHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCC---CChHHHHHH
Q 011353 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER---PNPRSLVTA 309 (488)
Q Consensus 243 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R---ps~~~il~~ 309 (488)
|||+||..||............. ........ ......+.++.+++.+||. +|.+| +|+.+++.+
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~-~~~~~~~~-p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKII-NWRETLYF-PDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHH-ccCCccCC-CCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 99999999886543221111110 00000000 0011246789999999997 67765 599999987
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-42 Score=328.77 Aligned_cols=245 Identities=24% Similarity=0.368 Sum_probs=207.7
Q ss_pred ccCCCCCCCeEEEEEeCC-----CCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 63 SEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
+.||.|.||.||+|.+.+ .-.||||.-+.+. ..+.+.|+.|..+|+.++|||||+++|+|.+ ...+||||+++
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~ 473 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAP 473 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEeccc
Confidence 567999999999999532 3468999988754 3457789999999999999999999999975 56899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcccc--
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST-- 214 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~-- 214 (488)
-|.|..+|..++ ..++......++.||+.+|.|||++ ++|||||...|||+...-.+||+|||+++...+...+..
T Consensus 474 ~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSk-rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~ 551 (974)
T KOG4257|consen 474 LGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESK-RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASR 551 (974)
T ss_pred chhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhh-chhhhhhhhhheeecCcceeeecccchhhhccccchhhccc
Confidence 999999998754 4589999999999999999999999 999999999999999999999999999998877654432
Q ss_pred ---CCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 215 ---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 215 ---~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
.+.|||||.+....++.+||||-|||++||+++ |..||.+ ..+...-..+...-+-..|+.+++.+..|+.
T Consensus 552 ~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg-----vkNsDVI~~iEnGeRlP~P~nCPp~LYslms 626 (974)
T KOG4257|consen 552 GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG-----VKNSDVIGHIENGERLPCPPNCPPALYSLMS 626 (974)
T ss_pred cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc-----ccccceEEEecCCCCCCCCCCCChHHHHHHH
Confidence 467999999999999999999999999999887 6677765 2223333333444444567789999999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhhhc
Q 011353 291 RCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
+||..+|.+||++.++...|..+..
T Consensus 627 kcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 627 KCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHhccCcccCCcHHHHHHHHHHHHH
Confidence 9999999999999999998877654
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=332.28 Aligned_cols=252 Identities=21% Similarity=0.345 Sum_probs=216.4
Q ss_pred ccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 61 IVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
.-.+||-|.||.||.|.|+ -...||||.++.+.. ..++|+.|+.+|+.++|||+|+|+|+|+....+|||+|||..|+
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGN 349 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGN 349 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCcc
Confidence 3467899999999999964 467899999987653 46789999999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcc--cc---
Q 011353 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--ST--- 214 (488)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~--~~--- 214 (488)
|.++|++..+..++.-..+.++-||..||+||..+ ++|||||...|+|+.++..+|++||||++++...+.. .|
T Consensus 350 LLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKF 428 (1157)
T KOG4278|consen 350 LLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKF 428 (1157)
T ss_pred HHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccC
Confidence 99999987777788888999999999999999998 9999999999999999999999999999988665432 22
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 293 (488)
.+.|+|||.+....++.|+|||+|||+|||+.| |..|+++-... ....++....+-.-|..|++.+.+||..||
T Consensus 429 PIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS-----qVY~LLEkgyRM~~PeGCPpkVYeLMraCW 503 (1157)
T KOG4278|consen 429 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYGLLEKGYRMDGPEGCPPKVYELMRACW 503 (1157)
T ss_pred cccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH-----HHHHHHhccccccCCCCCCHHHHHHHHHHh
Confidence 478999999999999999999999999999998 66777753322 222333344444456678899999999999
Q ss_pred cCCCCCCCChHHHHHHHHhhhcCCCC
Q 011353 294 QYEPRERPNPRSLVTALVTLQKDTEV 319 (488)
Q Consensus 294 ~~~p~~Rps~~~il~~L~~~~~~~~~ 319 (488)
+++|.+||++.++.+.++.+.....+
T Consensus 504 ~WsPsDRPsFaeiHqafEtmf~~sSi 529 (1157)
T KOG4278|consen 504 NWSPSDRPSFAEIHQAFETMFSSSSI 529 (1157)
T ss_pred cCCcccCccHHHHHHHHHHHhccccc
Confidence 99999999999999999988765544
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=329.21 Aligned_cols=237 Identities=19% Similarity=0.258 Sum_probs=192.7
Q ss_pred cCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||.||+|.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 479999999999994 568899999997532 12344566677777655 8999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~ 214 (488)
+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..... ....|
T Consensus 82 ~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 82 DLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKK-GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 99999865 34689999999999999999999998 9999999999999999999999999998754321 23467
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||.............. ....++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~------~~~~~~~~~~~~~~~ll~~~l~ 232 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN------DRPHFPRWISKEAKDCLSKLFE 232 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc------CCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999998875433222211111 0112334456789999999999
Q ss_pred CCCCCCCChH-HHHHH
Q 011353 295 YEPRERPNPR-SLVTA 309 (488)
Q Consensus 295 ~~p~~Rps~~-~il~~ 309 (488)
.+|.+||++. +++++
T Consensus 233 ~~P~~R~~~~~~l~~h 248 (316)
T cd05592 233 RDPTKRLGVDGDIRQH 248 (316)
T ss_pred CCHHHcCCChHHHHcC
Confidence 9999999875 55554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=330.58 Aligned_cols=237 Identities=17% Similarity=0.226 Sum_probs=195.0
Q ss_pred cCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||.||+|.. .+++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 479999999999994 568899999987532 22345577899998876 7999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~ 214 (488)
+|..++.. .+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++...... ....+
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 82 DLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRH-GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 99998864 34689999999999999999999998 9999999999999999999999999998753221 23457
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|+|+||+.||................ ..++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~ll~~~L~ 232 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD------VLYPVWLSKEAVSILKAFMT 232 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHHHHHHHhc
Confidence 899999999998889999999999999999999999887654332222111110 11233356789999999999
Q ss_pred CCCCCCC-------ChHHHHHH
Q 011353 295 YEPRERP-------NPRSLVTA 309 (488)
Q Consensus 295 ~~p~~Rp-------s~~~il~~ 309 (488)
.||++|| ++.+++++
T Consensus 233 ~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 233 KNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred cCHHHcCCCCCCCCCHHHHhcC
Confidence 9999999 77777766
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=331.19 Aligned_cols=253 Identities=21% Similarity=0.316 Sum_probs=200.6
Q ss_pred cccccccCCCCCCCeEEEEEe-C-----CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeC-Cee
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-E-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-DER 128 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~~~ 128 (488)
+|++++.||.|+||.||+|.. . +++.||+|+++..... ....+.+|+.++..+ +|+||++++++|... ...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 678889999999999999963 2 2478999999754322 244688899999999 899999999988654 568
Q ss_pred EEEEecCCCCCHHhhhccCC-----------------------------------------------------------C
Q 011353 129 LLVAEYMPNDTLAKHLFHWE-----------------------------------------------------------T 149 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~-----------------------------------------------------------~ 149 (488)
+++|||+++++|.+++.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999985321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC------CccccCCCCCCccc
Q 011353 150 QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEY 223 (488)
Q Consensus 150 ~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~ 223 (488)
..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.++|+|||+++..... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~-~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 2689999999999999999999998 9999999999999999999999999999865322 12234578999999
Q ss_pred cccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCC
Q 011353 224 LRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302 (488)
Q Consensus 224 ~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 302 (488)
+.+..++.++|||||||++|||++ |..||.............. .......+...+.++.+++.+||+.+|++||+
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLK----EGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHh----ccCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 999999999999999999999998 8877754221111000000 00111122335678999999999999999999
Q ss_pred hHHHHHHHHhhhc
Q 011353 303 PRSLVTALVTLQK 315 (488)
Q Consensus 303 ~~~il~~L~~~~~ 315 (488)
+.+++++|+.+..
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-42 Score=336.94 Aligned_cols=248 Identities=16% Similarity=0.140 Sum_probs=202.0
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
.+..+|++++.||+|+||.||++.. .++..||+|+++... ......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 3456788889999999999999994 568899999986421 123445788999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||++||+|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999999999853 3588899999999999999999998 9999999999999999999999999998765432
Q ss_pred -----CccccCCCCCCccccccC----CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC--
Q 011353 210 -----RSYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-- 278 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 278 (488)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||............. .......++
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~----~~~~~~~~~~~ 271 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM----DHKNSLTFPDD 271 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHH----cCCCcCCCCCc
Confidence 234689999999998753 37889999999999999999999987653321111111 100000111
Q ss_pred hHHHHHHHHHHHHhccCCCCC--CCChHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRE--RPNPRSLVTA 309 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~--Rps~~~il~~ 309 (488)
...+.++.+++.+||+.+|.+ |||+.++++|
T Consensus 272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 135678999999999999987 9999999988
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=322.75 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=206.8
Q ss_pred CcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.++.+.+.||.|+||.||+|... ++..+++|.+........+.+.+|+.+++.++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45667788899999999999732 345699999876654455679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCee
Q 011353 131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 196 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 196 (488)
||||+++++|.+++.... ...+++..++.++.||+.||.|||++ +++||||||+||+++.++.++
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~~ 163 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVK 163 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcEE
Confidence 999999999999996432 23489999999999999999999999 999999999999999999999
Q ss_pred eecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccc
Q 011353 197 LSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLT 269 (488)
Q Consensus 197 l~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 269 (488)
|+|||++...... ....++..|+|||++.+..++.++|||||||++|||+| |..||.................
T Consensus 164 l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~ 243 (291)
T cd05094 164 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV 243 (291)
T ss_pred ECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCC
Confidence 9999998754332 22334678999999998889999999999999999999 8877654332221111111111
Q ss_pred cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
...+...+..+.+++.+||+.+|.+|||+.++++.|+.+.+.
T Consensus 244 -----~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 244 -----LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred -----CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 112233567899999999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=322.64 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=205.0
Q ss_pred cccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.+.+.+.+|.|+||.||++.. .++..+|+|.+..........+.+|+.++.+++||||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 85 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 456777889999999999974 23456999999765544456799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecC
Q 011353 132 AEYMPNDTLAKHLFHWE-----------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (488)
|||+++++|.+++.... ...+++..++.++.|++.||.|||++ |++||||||+||++++++.++|+||
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~-~i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcEEeccC
Confidence 99999999999996422 13489999999999999999999998 9999999999999999999999999
Q ss_pred CCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccc
Q 011353 201 GLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 273 (488)
Q Consensus 201 Gla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
|+++..... ....+++.|+|||++.+..++.++|||||||++|+|+| |..||..................
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~--- 241 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL--- 241 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcC---
Confidence 998755332 12233678999999998889999999999999999999 77776543322221111111110
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
..+...+..+.+|+.+||+.+|.+|||+.++++.|+.+.+.
T Consensus 242 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 242 --QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 11223456899999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=322.27 Aligned_cols=251 Identities=20% Similarity=0.267 Sum_probs=202.3
Q ss_pred CCcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
+++++++++||.|+||.||+|... .+..||||+++..... ....+.+|+.++..++||||+++++++.+.+..
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 456788899999999999999843 2478999999855432 245688999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC
Q 011353 129 LLVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (488)
++++||+++++|.+++... ....+++..+..++.|++.||.|||+. |++||||||+||++++++.
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-CccccccchhheEecCCCc
Confidence 9999999999999998521 123578889999999999999999998 9999999999999999999
Q ss_pred eeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccc
Q 011353 195 PRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 267 (488)
Q Consensus 195 ~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 267 (488)
+||+|||+++...... ...+++.|+|||++.++.++.++|||||||++|||+| |..|+..............
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~- 241 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN- 241 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-
Confidence 9999999987653321 2234678999999988889999999999999999998 6666554322211111111
Q ss_pred cccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHh
Q 011353 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 312 (488)
......+..++..+.+++..||+.+|.+||++.+|++.|+.
T Consensus 242 ----~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 242 ----RQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred ----CCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11112334567789999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-42 Score=339.33 Aligned_cols=247 Identities=17% Similarity=0.165 Sum_probs=198.5
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
++|++++.||+|+||.||++. ..+++.||||++.... ......+.+|+.+|..++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 367889999999999999999 4568999999986432 123456889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~---- 208 (488)
||+++|+|.+++.. .+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 99999999999965 34588999999999999999999998 999999999999999999999999999742210
Q ss_pred -------------------------------------------CCccccCCCCCCccccccCCCCCCccchhhHHHHHHH
Q 011353 209 -------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245 (488)
Q Consensus 209 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 245 (488)
.....||+.|+|||++.+..++.++|||||||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0123578999999999988899999999999999999
Q ss_pred HhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCC---ChHHHHHH
Q 011353 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP---NPRSLVTA 309 (488)
Q Consensus 246 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp---s~~~il~~ 309 (488)
++|+.||.............. .. ...........+..+.+++.+|+ .+|.+|+ |+.++++|
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~-~~-~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVIN-WE-TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhc-cC-ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999999875432211111100 00 00000111235677889999877 5999999 88999887
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=330.35 Aligned_cols=243 Identities=18% Similarity=0.230 Sum_probs=197.9
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 132 (488)
+|++++.||+|+||.||+|.. .++..||||+++.... .....+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 356778889999999999994 4678999999875421 2234567788888877 5899999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~---- 208 (488)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 99999999999864 34589999999999999999999998 999999999999999999999999999875332
Q ss_pred CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 209 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||............... ...++...+.++.++
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~l 231 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAI 231 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCcCCHHHHHH
Confidence 12346789999999999999999999999999999999999988754332222111111 112344567789999
Q ss_pred HHHhccCCCCCCCCh-----HHHHHH
Q 011353 289 ASRCLQYEPRERPNP-----RSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rps~-----~~il~~ 309 (488)
+.+||+.+|.+|++. .+++++
T Consensus 232 i~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 232 CKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 999999999999985 555544
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=328.83 Aligned_cols=237 Identities=19% Similarity=0.216 Sum_probs=193.8
Q ss_pred cCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||.||+|.. .++..||||+++... ......+..|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 579999999999994 568899999997532 12344567788888765 8999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~ 214 (488)
+|.+++.. ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.++|+|||+++.... .....|
T Consensus 82 ~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05620 82 DLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSK-GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence 99999864 34689999999999999999999998 999999999999999999999999999874321 234567
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD------TPHYPRWITKESKDILEKLFE 232 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999989999999999999999999999998765433222111111 112233356789999999999
Q ss_pred CCCCCCCChH-HHHHH
Q 011353 295 YEPRERPNPR-SLVTA 309 (488)
Q Consensus 295 ~~p~~Rps~~-~il~~ 309 (488)
.||++||++. ++++|
T Consensus 233 ~dP~~R~~~~~~~~~h 248 (316)
T cd05620 233 RDPTRRLGVVGNIRGH 248 (316)
T ss_pred CCHHHcCCChHHHHcC
Confidence 9999999984 55544
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=330.14 Aligned_cols=232 Identities=20% Similarity=0.230 Sum_probs=188.8
Q ss_pred cCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHH-HHhccCCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||+||+|.. .+++.||||++..... .....+..|.. +++.++||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 469999999999994 5789999999864321 12334555554 567889999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~ 214 (488)
+|.+++.. ...+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++..... ....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 82 ELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 99999865 44689999999999999999999998 9999999999999999999999999998753221 23457
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|+|++|+.||................ ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~~~l~ 232 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP------LRLKPNISVSARHLLEGLLQ 232 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHHHHHHHhh
Confidence 899999999999889999999999999999999999887643322221111111 11223346789999999999
Q ss_pred CCCCCCCChH
Q 011353 295 YEPRERPNPR 304 (488)
Q Consensus 295 ~~p~~Rps~~ 304 (488)
.||.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (323)
T cd05575 233 KDRTKRLGAK 242 (323)
T ss_pred cCHHhCCCCC
Confidence 9999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-42 Score=338.65 Aligned_cols=246 Identities=17% Similarity=0.165 Sum_probs=195.9
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.|.+++.||+|+||+||+|. ..+++.||||++..... .....+.+|+.+++.++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 46788889999999999999 46788999999875321 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC-----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 208 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----- 208 (488)
|+++|+|.+++.+ .+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~-~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 9999999999965 34689999999999999999999998 999999999999999999999999999752210
Q ss_pred ----------------------------------------------CCccccCCCCCCccccccCCCCCCccchhhHHHH
Q 011353 209 ----------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL 242 (488)
Q Consensus 209 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 242 (488)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 0123578999999999988999999999999999
Q ss_pred HHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCC---hHHHHHH
Q 011353 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA 309 (488)
Q Consensus 243 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps---~~~il~~ 309 (488)
|||++|+.||.............. .. ...........++++.+++.+|+ .+|.+|++ +.++++|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~-~~-~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVIN-WQ-TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHc-cC-CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 999999998875432111111100 00 00000111234677888888876 49999987 7887766
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=315.62 Aligned_cols=247 Identities=23% Similarity=0.340 Sum_probs=203.6
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
.++++++||+|+||.||+|...++..||+|.+.... .....+.+|+.+++.++|+||+++++++. .+..++||||+++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMEN 84 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCC
Confidence 567888999999999999998788899999987554 34567999999999999999999999874 5678999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----cc
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SY 212 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-----~~ 212 (488)
++|.+++....+..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05067 85 GSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK-NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGA 163 (260)
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCC
Confidence 9999998765556789999999999999999999998 99999999999999999999999999987654221 22
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
.++..|+|||++.+..++.++||||||+++|+|++ |+.||............... .....+...+.++.+++.+
T Consensus 164 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05067 164 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-----YRMPRPDNCPEELYELMRL 238 (260)
T ss_pred cccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHH
Confidence 34568999999998889999999999999999999 88777644322211111010 1111223345789999999
Q ss_pred hccCCCCCCCChHHHHHHHHh
Q 011353 292 CLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~ 312 (488)
||..+|++|||+++++..|+.
T Consensus 239 ~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 239 CWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HccCChhhCCCHHHHHHHhhc
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=318.81 Aligned_cols=250 Identities=17% Similarity=0.177 Sum_probs=202.1
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
..+|++++.||+|+||.||+|. ..+++.||+|++..........+.+|+.++..++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 4578889999999999999999 467889999999765444556688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++++|.+++.. ..++++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... .
T Consensus 88 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 88 CGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSK-GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 999999999864 34689999999999999999999998 9999999999999999999999999998765332 2
Q ss_pred ccccCCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-ccccccccccCCCChHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
...+++.|+|||.+. ...++.++|||||||++|||++|+.|+............ ......+.. ......+..+.
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 242 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKL--KDKTKWSSTFH 242 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCC--ccccccCHHHH
Confidence 345778999999985 344788999999999999999999877533211100000 000010100 01123467899
Q ss_pred HHHHHhccCCCCCCCChHHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L 310 (488)
+++.+||+.+|++|||+.+++++|
T Consensus 243 ~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 243 NFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHhhCChhhCcCHHHHhcCC
Confidence 999999999999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=334.80 Aligned_cols=244 Identities=17% Similarity=0.176 Sum_probs=195.2
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
-..|.+++.||+|+||.||++. ..+++.||+|.... ..+.+|+.+++.++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 3568899999999999999999 56789999997542 3467899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----- 209 (488)
+. ++|..++.. ...+++..++.++.||+.||.|||++ +||||||||+|||++.++.+||+|||+++.....
T Consensus 165 ~~-~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~-~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~ 240 (391)
T PHA03212 165 YK-TDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKY 240 (391)
T ss_pred CC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHhEEEcCCCCEEEEeCCccccccccccccc
Confidence 95 689888864 34589999999999999999999998 9999999999999999999999999998753221
Q ss_pred CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh-----------HHHhh--cc------------
Q 011353 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----------DLIRD--RN------------ 264 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-----------~~~~~--~~------------ 264 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.|+..... ..+.. +.
T Consensus 241 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~ 320 (391)
T PHA03212 241 YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN 320 (391)
T ss_pred ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHH
Confidence 234689999999999988899999999999999999999977643210 00000 00
Q ss_pred cc----cccccc--ccCCC-----ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 265 IQ----TLTDSC--LEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 265 ~~----~~~~~~--~~~~~-----~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.. ...... ..... ....+.++.+|+.+||+.||.+|||+.+++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00 000000 00000 01245689999999999999999999999986
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=304.33 Aligned_cols=248 Identities=20% Similarity=0.222 Sum_probs=209.5
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC--CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.|.+-.+||+|.|+.|+++. ..+|+.+|+|+++.. ...+.+.+.+|+.+-+.|+|||||++...+......|||||+
T Consensus 12 ~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~ 91 (355)
T KOG0033|consen 12 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 91 (355)
T ss_pred hhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEec
Confidence 35566778999999999998 678999999998643 233567899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC---CCCCeeeecCCCccccCCCCc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDGRS 211 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~DfGla~~~~~~~~ 211 (488)
|.|++|..-|-. +-.+++..+...+.||+++|.|+|.+ +|||||+||+|+|+- ..--+||+|||+|.....+..
T Consensus 92 m~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n-~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~ 168 (355)
T KOG0033|consen 92 VTGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSN-GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA 168 (355)
T ss_pred ccchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence 999999877643 23478889999999999999999999 999999999999994 344599999999998775543
Q ss_pred ---cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 212 ---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 212 ---~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
..|||+|||||++...+|+..+|||+-|||||-|+.|..||.++....+-++....-.+.. +..-+..+++..+|
T Consensus 169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~--~~~w~~is~~Ak~L 246 (355)
T KOG0033|consen 169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYP--SPEWDTVTPEAKSL 246 (355)
T ss_pred cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCC--CcccCcCCHHHHHH
Confidence 4679999999999999999999999999999999999999998665555555444433321 22234567899999
Q ss_pred HHHhccCCCCCCCChHHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L 310 (488)
+.+||..||.+|.|+.|.++|-
T Consensus 247 vrrML~~dP~kRIta~EAL~Hp 268 (355)
T KOG0033|consen 247 IRRMLTVNPKKRITADEALKHP 268 (355)
T ss_pred HHHHhccChhhhccHHHHhCCc
Confidence 9999999999999999999883
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=327.68 Aligned_cols=237 Identities=19% Similarity=0.232 Sum_probs=193.1
Q ss_pred cCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||.||+|.. .+++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 579999999999995 557899999987532 12344567788888765 8999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~ 214 (488)
+|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++.... .....+
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 82 DLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSK-GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence 99999964 34689999999999999999999998 999999999999999999999999999875322 123467
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD------NPCYPRWLTREAKDILVKLFV 232 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHHHHhc
Confidence 89999999999888999999999999999999999988654322221111000 111233356789999999999
Q ss_pred CCCCCCCChH-HHHHH
Q 011353 295 YEPRERPNPR-SLVTA 309 (488)
Q Consensus 295 ~~p~~Rps~~-~il~~ 309 (488)
.||.+||++. +++++
T Consensus 233 ~~P~~R~~~~~~l~~h 248 (316)
T cd05619 233 REPERRLGVKGDIRQH 248 (316)
T ss_pred cCHhhcCCChHHHHcC
Confidence 9999999997 66554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=329.15 Aligned_cols=244 Identities=20% Similarity=0.250 Sum_probs=204.6
Q ss_pred ccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
-+++||.|+||-||-+. ..+...||||++.-+... ...++++|+..|++++|||++.+.|+|......|+|||||-
T Consensus 30 dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl 109 (948)
T KOG0577|consen 30 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL 109 (948)
T ss_pred HHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh
Confidence 45677999999999999 677889999999865443 35678999999999999999999999998889999999996
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCccccCC
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL 216 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 216 (488)
| |-.|++.-. ++++-+..+..|+.+.+.||.|||+. +.||||||..|||+++.|.|||+|||.|....+..+.+|||
T Consensus 110 G-SAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~-~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTP 186 (948)
T KOG0577|consen 110 G-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH-NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTP 186 (948)
T ss_pred c-cHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHh-hHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCc
Confidence 5 777777432 46799999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred CCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhc
Q 011353 217 AFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293 (488)
Q Consensus 217 ~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 293 (488)
.|||||++. .+.|+-++||||||+++.||...++|.+......... .+..--.+.+ -..+++..|.+|+..||
T Consensus 187 ywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY-HIAQNesPtL---qs~eWS~~F~~Fvd~CL 262 (948)
T KOG0577|consen 187 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNESPTL---QSNEWSDYFRNFVDSCL 262 (948)
T ss_pred cccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH-HHHhcCCCCC---CCchhHHHHHHHHHHHH
Confidence 999999986 4679999999999999999999997765432211111 1111111111 13457889999999999
Q ss_pred cCCCCCCCChHHHHHHHH
Q 011353 294 QYEPRERPNPRSLVTALV 311 (488)
Q Consensus 294 ~~~p~~Rps~~~il~~L~ 311 (488)
++=|.+|||..+++.|--
T Consensus 263 qKipqeRptse~ll~H~f 280 (948)
T KOG0577|consen 263 QKIPQERPTSEELLKHRF 280 (948)
T ss_pred hhCcccCCcHHHHhhcch
Confidence 999999999999998743
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=314.92 Aligned_cols=246 Identities=24% Similarity=0.356 Sum_probs=200.8
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.++++.+.||+|+||.||++...++..+|+|.+..... ....+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 45667788899999999999977777899999875432 34578899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcc----
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---- 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~---- 212 (488)
+++|.+++.... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||+++...+....
T Consensus 83 ~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (256)
T cd05059 83 NGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESN-GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG 160 (256)
T ss_pred CCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence 999999996533 3689999999999999999999998 9999999999999999999999999998765433211
Q ss_pred -ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 213 -STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 213 -~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..+..|+|||.+.+..++.++||||||+++|+|+| |..||............... .....+...+..+.+++.
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~ 235 (256)
T cd05059 161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-----YRLYRPKLAPTEVYTIMY 235 (256)
T ss_pred CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHHH
Confidence 12357999999998889999999999999999999 67666433221111111111 111223345678999999
Q ss_pred HhccCCCCCCCChHHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L 310 (488)
+||..+|++|||+.++++.|
T Consensus 236 ~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 236 SCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHhcCChhhCcCHHHHHHHh
Confidence 99999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=329.74 Aligned_cols=241 Identities=15% Similarity=0.219 Sum_probs=193.5
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||.||++. ..+++.||||+++.... .....+.+|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999 45688999999975422 2344578899999998 7999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~ 214 (488)
+|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 82 DLMFHMQR--QRKLPEEHARFYSAEISLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 99998864 35699999999999999999999999 999999999999999999999999999875321 233567
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH-----HhhccccccccccccCCCChHHHHHHHHHH
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
|+.|+|||++.+..++.++|||||||++|+|+||+.||....... ........+... ....+...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li 236 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHHH
Confidence 899999999999889999999999999999999998885211000 000000001111 1123444567899999
Q ss_pred HHhccCCCCCCCC------hHHHHHH
Q 011353 290 SRCLQYEPRERPN------PRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps------~~~il~~ 309 (488)
.+||+.||.+||| +.++++|
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 237 KGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999998 5666655
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=332.19 Aligned_cols=246 Identities=18% Similarity=0.212 Sum_probs=196.9
Q ss_pred ccccccCCCCCCCeEEEEEe----CCCCEEEEEEcCCCC----CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
|++++.||+|+||.||++.. .+++.||+|++.... ....+.+.+|+.++..+ +|+||+++++++...+..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 67788899999999999874 357899999986432 12245678899999999 5999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 82 lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKL-GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 99999999999999864 34689999999999999999999998 9999999999999999999999999998764322
Q ss_pred -----CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 210 -----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....||+.|+|||++.+.. ++.++|||||||++|||+||+.||...............+.. ....++...+.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 236 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIGP 236 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCH
Confidence 2346799999999998654 788999999999999999999988532110000000000000 11123344567
Q ss_pred HHHHHHHHhccCCCCCCC-----ChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rp-----s~~~il~~ 309 (488)
.+.+++.+||+.||++|| ++.+++++
T Consensus 237 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 237 EAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 899999999999999999 67788876
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-41 Score=314.55 Aligned_cols=249 Identities=25% Similarity=0.350 Sum_probs=203.4
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEe-eCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~E~ 134 (488)
..++.+.+.||+|+||.||++... +..||+|.++... ..+.+.+|+.+++.++|+|++++++++. ..+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 346778888999999999999864 6689999987543 3567899999999999999999999764 45678999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-Cccc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYS 213 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~~ 213 (488)
+++++|.+++.......+++..+..++.|++.||.|||++ |++||||||+||++++++.+||+|||+++..... ....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 9999999999765555689999999999999999999998 9999999999999999999999999998765433 2233
Q ss_pred cCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 214 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.+..|+|||++.+..++.++|||||||++|+|++ |+.|+............... .....+...+..+.+++.+|
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05082 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-----YKMDAPDGCPPVVYDVMKQC 235 (256)
T ss_pred cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCCCCHHHHHHHHHH
Confidence 4568999999998889999999999999999998 88777654332221111111 11122334567899999999
Q ss_pred ccCCCCCCCChHHHHHHHHhh
Q 011353 293 LQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 293 l~~~p~~Rps~~~il~~L~~~ 313 (488)
|+.+|++|||+.++++.|+.+
T Consensus 236 l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 236 WHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred hcCChhhCcCHHHHHHHHhcC
Confidence 999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=332.26 Aligned_cols=248 Identities=19% Similarity=0.289 Sum_probs=193.9
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeC-----CeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 129 (488)
+|++.+.||+|+||.||+|. ..++..||||+++... .....++.+|+.+++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 36778889999999999999 4578999999987432 22345688999999999999999999988543 3479
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+. ++|.+++.. ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELME-SDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCC-CCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999995 589998864 34589999999999999999999999 9999999999999999999999999998754221
Q ss_pred -------CccccCCCCCCcccccc--CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHH-------------------h
Q 011353 210 -------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-------------------R 261 (488)
Q Consensus 210 -------~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-------------------~ 261 (488)
....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||........ .
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 23467899999999876 5689999999999999999999988865321100 0
Q ss_pred hcccccccccc---ccCC---CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 262 DRNIQTLTDSC---LEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 262 ~~~~~~~~~~~---~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
........... .... ..+..++.+.+++.+||+.||++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000000 0000 001235678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-41 Score=314.45 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=202.3
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
..|++.++||+|+||.||+|...++..||+|+++... .....+.+|+.+++.++||||+++++++.. ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 3578889999999999999997666689999997543 235678999999999999999999998754 56899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----c
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-----~ 211 (488)
+|+|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~ 162 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence 99999999754445689999999999999999999998 99999999999999999999999999987654332 1
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..++..|+|||++.+..++.++|||||||++|+|+| |..||................ ....+...+..+.+++.
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~ 237 (262)
T cd05071 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-----RMPCPPECPESLHDLMC 237 (262)
T ss_pred CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-----CCCCccccCHHHHHHHH
Confidence 234567999999988889999999999999999999 666665432222111111100 11123345678999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhh
Q 011353 291 RCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
+||+.+|++|||+.++++.|+..
T Consensus 238 ~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 238 QCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHccCCcccCCCHHHHHHHHHHh
Confidence 99999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=314.59 Aligned_cols=241 Identities=24% Similarity=0.348 Sum_probs=195.2
Q ss_pred cCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHH
Q 011353 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 141 (488)
.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 579999999999994 5788999999865432 23456999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc------cccC
Q 011353 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------YSTN 215 (488)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~------~~~~ 215 (488)
+++... ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++........ ...+
T Consensus 82 ~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 82 TFLRTE-GPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 999642 34589999999999999999999998 999999999999999999999999999876443211 1123
Q ss_pred CCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
..|+|||.+.++.++.++|||||||++|+|++ |..|+............. .......+...+..+.+++.+||+
T Consensus 160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~ 234 (252)
T cd05084 160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-----QGVRLPCPELCPDAVYRLMERCWE 234 (252)
T ss_pred eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHH-----cCCCCCCcccCCHHHHHHHHHHcC
Confidence 56999999998889999999999999999998 665554322111111111 111112333456789999999999
Q ss_pred CCCCCCCChHHHHHHHH
Q 011353 295 YEPRERPNPRSLVTALV 311 (488)
Q Consensus 295 ~~p~~Rps~~~il~~L~ 311 (488)
.+|++|||+.++++.|+
T Consensus 235 ~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 235 YDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CChhhCcCHHHHHHHHh
Confidence 99999999999999876
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-41 Score=315.36 Aligned_cols=249 Identities=22% Similarity=0.310 Sum_probs=202.4
Q ss_pred cccccccCCCCCCCeEEEEEeC----CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
++.+.+.||+|+||.||+|.+. +...||||.++..... ....|.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 84 (266)
T cd05033 5 YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIIT 84 (266)
T ss_pred HceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEE
Confidence 4566777899999999999853 2458999998754332 3456899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC--
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 210 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-- 210 (488)
||+++++|.+++.... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||+++......
T Consensus 85 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd05033 85 EYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT 162 (266)
T ss_pred EcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence 9999999999996533 3689999999999999999999998 99999999999999999999999999988764211
Q ss_pred ----ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 211 ----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+................ ....+...+..+
T Consensus 163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l 237 (266)
T cd05033 163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY-----RLPPPMDCPSAL 237 (266)
T ss_pred eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHH
Confidence 1223567999999998889999999999999999998 887765433222211111110 111223456789
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+++.+||+.+|++||++.+++++|+.+
T Consensus 238 ~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 238 YQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 9999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=317.72 Aligned_cols=253 Identities=18% Similarity=0.244 Sum_probs=200.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCC----EEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.++++++.||.|+||+||+|.+ .++. .|++|.+...... ...++..|+..+..++||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 3566778889999999999995 3444 4788888644322 2356788888999999999999999885 455789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
|+||+++|+|.+++... .+.+++..+..++.||+.||.|||++ +++|+||||+|||++.++.+||+|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEH-RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred EEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 99999999999999653 34689999999999999999999998 9999999999999999999999999999765332
Q ss_pred -----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....++..|++||++.+..++.++|||||||++|||+| |..|+.+......... .........+..++.
T Consensus 164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 238 (279)
T cd05111 164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL-----LEKGERLAQPQICTI 238 (279)
T ss_pred cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-----HHCCCcCCCCCCCCH
Confidence 12235678999999998889999999999999999998 8877765432221111 111001111222456
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
.+..++..||..+|++|||+.++++.|..+...+
T Consensus 239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 239 DVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 7899999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=321.11 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=202.2
Q ss_pred CCcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
+.++.+.++||+|+||.||++... ++..+|+|.+..........+.+|+.+++.++|+||+++++++.+.+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 456677889999999999999632 35689999987655455667999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCee
Q 011353 130 LVAEYMPNDTLAKHLFHWET-------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 196 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 196 (488)
+||||+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC-CeecccccHhhEEEcCCCCEE
Confidence 99999999999999965321 2488999999999999999999998 999999999999999999999
Q ss_pred eecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccc
Q 011353 197 LSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLT 269 (488)
Q Consensus 197 l~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 269 (488)
|+|||++....... ...+++.|+|||++.+..++.++|||||||++|||++ |..||...............
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-- 240 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG-- 240 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC--
Confidence 99999987543221 2233578999999998889999999999999999998 77766443221111111000
Q ss_pred cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.....+...+..+.+++.+||+.||.+||++.+|++.|+
T Consensus 241 ---~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 241 ---RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 011122345678999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=345.64 Aligned_cols=247 Identities=17% Similarity=0.212 Sum_probs=202.9
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCC-------
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------- 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 126 (488)
.+|.+.+.||+|+||+||++. ..+++.||||++..... .....+.+|+.++..++|+||++++..+...+
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 467788889999999999998 56789999999875432 23456889999999999999999988775432
Q ss_pred -eeEEEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 127 -ERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 127 -~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
.+++||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~-~IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK-HMIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEeCCCCEEEEecccC
Confidence 368999999999999998642 234689999999999999999999998 9999999999999999999999999998
Q ss_pred cccCC------CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCC
Q 011353 204 KNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (488)
Q Consensus 204 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
+.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||................. ...
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~-----~~~ 265 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY-----DPL 265 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC-----CCC
Confidence 76432 2345689999999999998899999999999999999999999876543322222111111 123
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+...++++.+++.+||+.+|.+|||+.+++++
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 34466789999999999999999999999986
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=310.89 Aligned_cols=244 Identities=17% Similarity=0.229 Sum_probs=206.6
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
+.++++||+|+||.||++. ..+|..||||.+.... +.+++.+|+.++++++.|++|+++|.+.....++||||||-.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 3577889999999999999 5679999999987543 688899999999999999999999999889999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCccc
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 213 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~ 213 (488)
||+.+.++- .++++++..+..++...++||+|||.. .-||||||..|||++.+|++||+|||.|....+ ..+..
T Consensus 113 GSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T KOG0574|consen 113 GSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI 190 (502)
T ss_pred CcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence 999999865 456899999999999999999999998 889999999999999999999999999876544 34668
Q ss_pred cCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhc
Q 011353 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293 (488)
Q Consensus 214 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 293 (488)
||+.|||||++..-.|+.++||||||++..||..|++|+.. .-+.. ..+.--..+...-.-|...+.++-+++..||
T Consensus 191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD-IHPMR--AIFMIPT~PPPTF~KPE~WS~~F~DFi~~CL 267 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD-IHPMR--AIFMIPTKPPPTFKKPEEWSSEFNDFIRSCL 267 (502)
T ss_pred cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccc-ccccc--eeEeccCCCCCCCCChHhhhhHHHHHHHHHh
Confidence 99999999999999999999999999999999999965432 11111 0111111111112235668899999999999
Q ss_pred cCCCCCCCChHHHHHH
Q 011353 294 QYEPRERPNPRSLVTA 309 (488)
Q Consensus 294 ~~~p~~Rps~~~il~~ 309 (488)
-++|++|-|+-.+++|
T Consensus 268 iK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 268 IKKPEERKTALRLCEH 283 (502)
T ss_pred cCCHHHHHHHHHHhhh
Confidence 9999999999998887
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=315.62 Aligned_cols=247 Identities=24% Similarity=0.352 Sum_probs=202.7
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
+++++++||+|+||.||+|...++..||+|.++.... ....+.+|+.++++++|+|++++++++. ....++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 5678889999999999999987888899999976443 3567999999999999999999999885 4568999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----cc
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SY 212 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-----~~ 212 (488)
++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05070 85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence 9999999765455689999999999999999999998 99999999999999999999999999987654321 12
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
.++..|+|||.+.+..++.++||||||+++|+|++ |..||............. .......+...+..+.+++.+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05070 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE-----RGYRMPCPQDCPISLHELMLQ 238 (260)
T ss_pred CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCcCCHHHHHHHHH
Confidence 23567999999988889999999999999999999 777765432211111111 111112234456789999999
Q ss_pred hccCCCCCCCChHHHHHHHHh
Q 011353 292 CLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~ 312 (488)
||..+|++|||+.++...|+.
T Consensus 239 ~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 239 CWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=325.85 Aligned_cols=247 Identities=19% Similarity=0.172 Sum_probs=209.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 131 (488)
..|.+.++||+|.||.||++.. .+|+.+|+|++.+.... ....+.+|+.+|+.+. |||||.+.++|++...+++|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 3567778899999999999994 55999999999865443 3457999999999998 99999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC----CCCeeeecCCCccccC
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGLMKNSR 207 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~DfGla~~~~ 207 (488)
||++.||.|.+.+... .+++..+..++.|++.++.|||+. |++||||||+|+|+.. ++.+|++|||++....
T Consensus 115 mEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~-gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL-GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999999999999764 399999999999999999999998 9999999999999953 3579999999999877
Q ss_pred CC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 208 ~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
.. ....||+.|+|||++....++..+||||+||++|.|++|.+||...............-. ......-...+..
T Consensus 191 ~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--~f~~~~w~~is~~ 268 (382)
T KOG0032|consen 191 PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--DFTSEPWDDISES 268 (382)
T ss_pred CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--CCCCCCccccCHH
Confidence 63 456799999999999999999999999999999999999999987654333221111111 1112223446789
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHH
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+.+++..|+..||..|+|+.++++|
T Consensus 269 akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 269 AKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HHHHHHHhcccCcccCCCHHHHhcC
Confidence 9999999999999999999999996
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=327.88 Aligned_cols=237 Identities=18% Similarity=0.247 Sum_probs=195.6
Q ss_pred cCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||.|+||+||++.. .++..||||+++... ......+.+|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 479999999999995 467899999997532 22345677899999888 7999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~ 214 (488)
+|..++.+ ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.... .....+
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 82 DLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHER-GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 99998864 34699999999999999999999998 999999999999999999999999999865321 123457
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
++.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+..+.+++.+||+
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED------EVRYPRWLSKEAKSILKSFLT 232 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcc
Confidence 89999999999999999999999999999999999988654332221111110 112334456789999999999
Q ss_pred CCCCCCCCh-----HHHHHH
Q 011353 295 YEPRERPNP-----RSLVTA 309 (488)
Q Consensus 295 ~~p~~Rps~-----~~il~~ 309 (488)
.||.+|||+ .+++++
T Consensus 233 ~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 233 KNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCHHHcCCCCCCCHHHHhcC
Confidence 999999999 777765
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=330.07 Aligned_cols=241 Identities=16% Similarity=0.214 Sum_probs=193.0
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||.||++. ..+++.||+|+++.... .....+.+|+.++.++ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 46999999999999 45688999999975422 2344577899888877 7999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~ 214 (488)
+|..++.. .+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 82 DLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 99998864 34699999999999999999999998 999999999999999999999999999875322 123467
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH-----HhhccccccccccccCCCChHHHHHHHHHH
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
|+.|+|||++.+..++.++|||||||++|+|+||+.||....... ........+.. ....+|...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~ll 236 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCCCCCHHHHHHH
Confidence 899999999999899999999999999999999998884211000 00000000111 01124445677899999
Q ss_pred HHhccCCCCCCCCh------HHHHHH
Q 011353 290 SRCLQYEPRERPNP------RSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~------~~il~~ 309 (488)
.+||+.||.+||++ .++++|
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 237 KSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 99999999999984 566655
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=316.45 Aligned_cols=255 Identities=17% Similarity=0.214 Sum_probs=207.0
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..|++.+.||.|+||.||++. ..++..+|||.+..... .....+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 456778888999999999999 56789999998865322 22456889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 133 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
||+++++|.+++... ....+++..++.++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999988642 234689999999999999999999998 99999999999999999999999999987654332
Q ss_pred ----ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 211 ----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
...++..|+|||++.+..++.++||||||+++|+|++|..||.....+..... ..+.........+...+..+.
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHh--hhhhcCCCCCCCcccccHHHH
Confidence 23577899999999988899999999999999999999988764332211100 000000011111234667899
Q ss_pred HHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 287 RLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
+++.+||..+|.+|||+.+|++.+.++.
T Consensus 239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 239 QLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 9999999999999999999999988753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=333.96 Aligned_cols=247 Identities=18% Similarity=0.239 Sum_probs=205.0
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.++||++||.|+||.||++. ...+-..|.|+|........+.|+-||++|..++||+||+|++.|...+.++|+.|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 46799999999999999999 55566678899987776778889999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC----CCCcc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----DGRSY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~----~~~~~ 212 (488)
||-++..+... +.++++.++.-+++|++.||.|||++ +|||||||..|||++-+|.++|+|||.+.... ...+.
T Consensus 113 GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~-~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsF 190 (1187)
T KOG0579|consen 113 GGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQ-NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSF 190 (1187)
T ss_pred CchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhc-chhhhhccccceEEEecCcEeeecccccccchhHHhhhccc
Confidence 99999888664 45799999999999999999999999 99999999999999999999999999865432 23567
Q ss_pred ccCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 213 STNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 213 ~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
.|||+|||||+.. ..+|+.++||||||++|.||..+.+|...-....+. -.+..--++.+ .-|..++..+.+
T Consensus 191 IGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl-lKiaKSePPTL--lqPS~Ws~~F~D 267 (1187)
T KOG0579|consen 191 IGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-LKIAKSEPPTL--LQPSHWSRSFSD 267 (1187)
T ss_pred cCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH-HHHhhcCCCcc--cCcchhhhHHHH
Confidence 8999999999875 567999999999999999999998554322111110 01111111111 135668889999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
|+..||.+||..||++.++++|
T Consensus 268 fLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 268 FLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHHHhcCCccCCCHHHHhhC
Confidence 9999999999999999999987
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=332.63 Aligned_cols=248 Identities=17% Similarity=0.152 Sum_probs=199.5
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
.....|++++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 3346788889999999999999994 568899999986421 123445889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++|+|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~-~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 120 MVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSM-GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 99999999999999953 3588999999999999999999998 9999999999999999999999999998865432
Q ss_pred -----CccccCCCCCCccccccCC----CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC--
Q 011353 210 -----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-- 278 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 278 (488)
....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||........... +........++
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~----i~~~~~~~~~p~~ 271 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK----IMDHKNSLNFPED 271 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHH----HHhCCcccCCCCc
Confidence 2346899999999997543 78899999999999999999999876533211111 11110001111
Q ss_pred hHHHHHHHHHHHHhccCCCCC--CCChHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRE--RPNPRSLVTA 309 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~--Rps~~~il~~ 309 (488)
...+..+.+++..||..++.+ |+|+.++++|
T Consensus 272 ~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 272 VEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 234678999999999865543 8899999987
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-42 Score=330.93 Aligned_cols=234 Identities=17% Similarity=0.191 Sum_probs=193.4
Q ss_pred ccCCCCCCCeEEEEEe----CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 63 SEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
+.||+|+||.||++.. .+|+.||+|+++.... .....+.+|+.++.+++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5679999999999874 3578999999975322 234457889999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~ 212 (488)
+|+|.+++.. ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 9999999964 34689999999999999999999998 9999999999999999999999999998765433 234
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.+++.|+|||++.+..++.++|||||||++|||+||+.||............... ....+...+..+.+++.+|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~ 232 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQSLLRAL 232 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHH
Confidence 5789999999999888999999999999999999999988654322221111111 1123344567899999999
Q ss_pred ccCCCCCCCChHH
Q 011353 293 LQYEPRERPNPRS 305 (488)
Q Consensus 293 l~~~p~~Rps~~~ 305 (488)
|+.||++|||+.+
T Consensus 233 l~~~P~~R~~a~~ 245 (318)
T cd05582 233 FKRNPANRLGAGP 245 (318)
T ss_pred hhcCHhHcCCCCC
Confidence 9999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=313.16 Aligned_cols=249 Identities=26% Similarity=0.392 Sum_probs=206.6
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.++++.+.+|.|+||.||+|... ++.||||.++.... ..+++.+|+.+++.++|+||+++++++.+.+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 35667788899999999999874 67899999986543 46679999999999999999999999998899999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc-cccC
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTN 215 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~ 215 (488)
+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++....... ...+
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 162 (256)
T cd05039 84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP 162 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccchhcccceEEEeCCCCEEEcccccccccccccccCCCc
Confidence 99999999765545799999999999999999999998 999999999999999999999999999887643322 2335
Q ss_pred CCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
..|+|||++.+..++.++||||||+++|++++ |..||............... .....+...+..+.+++.+||.
T Consensus 163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~ 237 (256)
T cd05039 163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-----YRMEAPEGCPPEVYKVMKDCWE 237 (256)
T ss_pred ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-----CCCCCccCCCHHHHHHHHHHhc
Confidence 67999999998889999999999999999998 88776554332222111111 1112233456789999999999
Q ss_pred CCCCCCCChHHHHHHHHhh
Q 011353 295 YEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 295 ~~p~~Rps~~~il~~L~~~ 313 (488)
.+|++|||+.++++.|+.+
T Consensus 238 ~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 238 LDPAKRPTFKQLREQLALI 256 (256)
T ss_pred cChhhCcCHHHHHHHHhcC
Confidence 9999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-41 Score=313.61 Aligned_cols=245 Identities=20% Similarity=0.267 Sum_probs=204.0
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|.+.+.||+|++|.||++.. .++..|++|.+.... ......+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 45667789999999999994 568999999986432 234567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----c
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----~ 211 (488)
++++|.+++.......+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++...... .
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 999999999765456799999999999999999999998 99999999999999999999999999987654432 2
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..+++.|+|||++.+..++.++|||||||++++|+||+.||................. ...+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~ 235 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF-----PPVSQMYSQQLAQLIDQ 235 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----CCCccccCHHHHHHHHH
Confidence 3567889999999988899999999999999999999988865432222111111111 12222456789999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||+.+|++||++.+++++
T Consensus 236 ~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 236 CLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HccCCcccCcCHHHHhhC
Confidence 999999999999999875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=318.98 Aligned_cols=247 Identities=19% Similarity=0.233 Sum_probs=199.7
Q ss_pred cccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
+..+.||.|+||+||++. ..+++.||+|.+...... ....+.+|+.+++.++|+||+.+.+.+.+.+..++||||+
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05632 3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIM 82 (285)
T ss_pred eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEec
Confidence 344567999999999999 457889999998654322 2345788999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---Ccc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSY 212 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~~ 212 (488)
++++|.+++.......+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++...... ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05632 83 NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR 161 (285)
T ss_pred cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence 999999988654455699999999999999999999998 9999999999999999999999999998765432 234
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.++..|+|||++.+..++.++|+|||||++|+|++|..||................... ...++...+..+.+|+..|
T Consensus 162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05632 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKFSEEAKSICKML 239 (285)
T ss_pred CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccCCHHHHHHHHHH
Confidence 67899999999998889999999999999999999999886543221111111111110 1122334567889999999
Q ss_pred ccCCCCCCCC-----hHHHHHH
Q 011353 293 LQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 293 l~~~p~~Rps-----~~~il~~ 309 (488)
|+.||++||+ +.+++.+
T Consensus 240 l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 240 LTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ccCCHhHcCCCcccChHHHHcC
Confidence 9999999999 6777776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=318.81 Aligned_cols=254 Identities=20% Similarity=0.304 Sum_probs=200.6
Q ss_pred cccccccCCCCCCCeEEEEEe-----CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEee--CCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 130 (488)
.+++++.||+|+||.||++.. .++..||||.+........+.+.+|+++++.++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 567888899999999999974 2578999999986654456679999999999999999999998754 346889
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
||||+++++|.+++... ...+++..+..++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++.......
T Consensus 85 v~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 85 VMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred EEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 99999999999999643 34589999999999999999999998 99999999999999999999999999988654332
Q ss_pred c-------cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh---hccc--------ccccccc
Q 011353 211 S-------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR---DRNI--------QTLTDSC 272 (488)
Q Consensus 211 ~-------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~---~~~~--------~~~~~~~ 272 (488)
. ..++..|+|||++.+..++.++|||||||++|||++|..++......... .... .......
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN 242 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence 1 11234599999999888999999999999999999987654332211110 0000 0001111
Q ss_pred ccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.....+...+..+.+|+.+||..+|++|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11112234567899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=339.84 Aligned_cols=247 Identities=20% Similarity=0.256 Sum_probs=192.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeC--------Ce
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--------DE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~~ 127 (488)
..|.+++.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++++++... ..
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 3578888899999999999994 568899999986432 2345799999999999999999887432 24
Q ss_pred eEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-CeeeecCCCcc
Q 011353 128 RLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMK 204 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~DfGla~ 204 (488)
+++||||+++ +|.+++.. .....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~-~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK-FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 6799999976 78777643 2345689999999999999999999999 999999999999998664 69999999998
Q ss_pred ccCCC---CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc---------------
Q 011353 205 NSRDG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------- 265 (488)
Q Consensus 205 ~~~~~---~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------- 265 (488)
..... ....+|+.|+|||++.+. .++.++|||||||++|||+||..||.+...........
T Consensus 220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~ 299 (440)
T PTZ00036 220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN 299 (440)
T ss_pred hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc
Confidence 65432 345678999999998764 58999999999999999999998886542111000000
Q ss_pred --------cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 --------QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 --------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.......+...++...+.++.+|+.+||+.||.+|||+.++++|
T Consensus 300 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 300 PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00000011112233356789999999999999999999999987
|
|
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=319.87 Aligned_cols=256 Identities=20% Similarity=0.280 Sum_probs=204.3
Q ss_pred CCcccccccCCCCCCCeEEEEEeC-CC--CEEEEEEcCCCC-CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLE-NQ--FRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 130 (488)
|++|.+.+.||.|+||.||+|... ++ ..+++|.++... ....+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 456778888999999999999853 33 357899887432 22345789999999999 79999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCee
Q 011353 131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 196 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 196 (488)
||||+++++|.+++.... ...+++..+..++.|++.||+|||+. |++||||||+|||++.++.+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK-QFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCcCCcceEEECCCCeEE
Confidence 999999999999996421 13488999999999999999999998 999999999999999999999
Q ss_pred eecCCCccccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccccccc
Q 011353 197 LSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 272 (488)
Q Consensus 197 l~DfGla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 272 (488)
|+|||++...... .....+..|+|||++.+..++.++|||||||++|||+| |..||...............
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~----- 234 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG----- 234 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----
Confidence 9999998643321 11222457999999988889999999999999999998 88887654332222111111
Q ss_pred ccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
.....+...+..+.+|+.+||+.+|.+|||+.++++.|..+....
T Consensus 235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111223345678999999999999999999999999998876543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=314.08 Aligned_cols=239 Identities=19% Similarity=0.324 Sum_probs=191.6
Q ss_pred cCCCCCCCeEEEEEeCC-------------CCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 64 EHGEKAPNVVYKGKLEN-------------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.||+|+||.||+|...+ ...|++|.+..........+.+|+.+++.++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 57999999999998432 23589999876544445578889999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC-------eeeecCCCc
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-------PRLSCFGLM 203 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-------~kl~DfGla 203 (488)
||||+++|+|..++... ...+++..++.++.||+.||.|||++ +++||||||+|||++.++. ++++|||++
T Consensus 82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 82 VEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDK-DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhC-CeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 99999999999988642 34689999999999999999999998 9999999999999986664 899999998
Q ss_pred cccCCCCccccCCCCCCccccc-cCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 204 KNSRDGRSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 204 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..........++..|+|||++. +..++.++|||||||++|||++ |..|+........... ..... ......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~-----~~~~~--~~~~~~ 232 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF-----YEGQC--MLVTPS 232 (262)
T ss_pred ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH-----HhcCc--cCCCCC
Confidence 7766555566788999999987 4568999999999999999985 6665544322111110 00000 111123
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
+.++.+|+.+||+.||.+||++.+|++.++
T Consensus 233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 233 CKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 467999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-42 Score=332.12 Aligned_cols=247 Identities=16% Similarity=0.141 Sum_probs=199.6
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|.+++.||+|+||+||++. ..+++.||||+++.... .....+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 46778888999999999999 45789999999975422 234568889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC---
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~--- 210 (488)
|+++|+|.+++... ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~-~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 82 YQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQM-GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 99999999999753 24699999999999999999999998 99999999999999999999999999997654332
Q ss_pred --ccccCCCCCCccccc------cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 211 --SYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 211 --~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
...+|+.|+|||++. ...++.++|||||||++|||++|+.||.............. .. ...........+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~-~~-~~~~~~~~~~~~ 237 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMN-FQ-RFLKFPEDPKVS 237 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHc-CC-CccCCCCCCCCC
Confidence 235789999999987 45578999999999999999999998865432211111100 00 000000112356
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+.+++..||+ +|.+|||+.++++|
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 789999999998 99999999999876
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=313.42 Aligned_cols=240 Identities=20% Similarity=0.259 Sum_probs=194.6
Q ss_pred cCCCCCCCeEEEEEe---CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
+||+|+||.||+|.+ .++..+|+|+++..... ..+.+.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 579999999999964 35788999998754322 2456899999999999999999999885 45678999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-------c
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S 211 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-------~ 211 (488)
+|.+++.. ...+++..+..++.|++.||.|||++ +++||||||.||+++.++.+||+|||++....... .
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEET-NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 99999964 34689999999999999999999998 99999999999999999999999999987654322 1
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..+++.|+|||.+....++.++|||||||++|||+| |..||........... +........+...+.++.++|.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM-----IESGERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHCCCCCCCCCCCCHHHHHHHH
Confidence 123478999999988889999999999999999998 8877754322211111 1111112234446788999999
Q ss_pred HhccCCCCCCCChHHHHHHHHh
Q 011353 291 RCLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~ 312 (488)
+||+.||++||++.+|...|+.
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhc
Confidence 9999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=299.04 Aligned_cols=252 Identities=19% Similarity=0.207 Sum_probs=204.3
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC----cc----HHHHHHHHHHHhcc-CCCCcccEEEEE
Q 011353 53 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW----PD----ARQFLEEARAVGQL-RNRRLANLLGCC 122 (488)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----~~----~~~~~~e~~~l~~l-~h~niv~l~~~~ 122 (488)
...|..|.--+.+|.|..++|-++. ..+|..+|+|++..... .. .+.-.+|+.+|+++ .||+|+.+.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 3345555555666999999999988 66788999999864321 11 23356799999999 699999999999
Q ss_pred eeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCC
Q 011353 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (488)
Q Consensus 123 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGl 202 (488)
+.+..+++|+|.|+.|.|.|+|.. .-.+++....+|+.|+++|++|||.+ +||||||||+|||++++.++||+|||+
T Consensus 93 es~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~-~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHAR-NIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHh-hhhhcccChhheeeccccceEEeccce
Confidence 999999999999999999999963 55699999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC---ccccCCCCCCccccc------cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccc
Q 011353 203 MKNSRDGR---SYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273 (488)
Q Consensus 203 a~~~~~~~---~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
++....+. ..+|||+|+|||.+. ...|+...|+|+.||+||-|+.|.+||.....-.+....+..-.. .
T Consensus 170 a~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyq--F 247 (411)
T KOG0599|consen 170 ACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQ--F 247 (411)
T ss_pred eeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccc--c
Confidence 99887774 568999999999885 234888999999999999999999877654322222111111110 1
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....-.+.+....+||.+||+.||.+|.|++++++|
T Consensus 248 ~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 248 RSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 111123467889999999999999999999999998
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=328.68 Aligned_cols=233 Identities=17% Similarity=0.205 Sum_probs=189.5
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHH-HHhccCCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||.||++. ..+|+.||||++.... ......+..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 57999999999999 5678999999986532 122344556655 467789999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~ 214 (488)
+|..++.. ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~-givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 82 ELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence 99998864 45689999999999999999999998 999999999999999999999999999875322 233468
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|+|++|..||................. ..++..+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL------VLRPGASLTAWSILEELLE 232 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc------cCCCCCCHHHHHHHHHHhc
Confidence 8999999999998999999999999999999999998876533222221111110 1122356788999999999
Q ss_pred CCCCCCCChHH
Q 011353 295 YEPRERPNPRS 305 (488)
Q Consensus 295 ~~p~~Rps~~~ 305 (488)
.+|.+||++++
T Consensus 233 ~~p~~R~~~~~ 243 (325)
T cd05604 233 KDRQRRLGAKE 243 (325)
T ss_pred cCHHhcCCCCC
Confidence 99999998864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=320.75 Aligned_cols=257 Identities=21% Similarity=0.298 Sum_probs=203.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCC--EEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQF--RIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
.|+++.+.+.||+|+||.||+|.. .++. .+|+|.++.... .....+.+|+.++.++ +|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 356677888899999999999995 3443 468888764332 2345688999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCe
Q 011353 130 LVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (488)
+||||+++++|.+++.... ...+++..++.++.|++.||.|||+. |++||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEecCCCcE
Confidence 9999999999999996432 23578999999999999999999998 99999999999999999999
Q ss_pred eeecCCCccccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccc
Q 011353 196 RLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 271 (488)
Q Consensus 196 kl~DfGla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 271 (488)
||+|||++...... .....+..|+|||++.+..++.++|||||||++|||+| |..||..............
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----- 238 (303)
T cd05088 164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ----- 238 (303)
T ss_pred EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc-----
Confidence 99999998643211 11223567999999988889999999999999999998 8877754322211111110
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
......+...+..+.+++.+||+.+|++|||+.++++.|..+....
T Consensus 239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111122335678999999999999999999999999999876554
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=327.29 Aligned_cols=236 Identities=17% Similarity=0.233 Sum_probs=193.2
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEe
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E 133 (488)
+++++.||+|+||+||+|. ..+++.||||+++... ....+.+..|..++..+. |++|+++++++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 3556778999999999999 4578899999987532 223456788999998885 6788899999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++|+|.+++.. ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 82 y~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~-~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 82 YVNGGDLMYHIQQ--VGKFKEPQAVFYAAEISVGLFFLHRR-GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred CCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeccccccccCCCCccc
Confidence 9999999999864 34699999999999999999999998 9999999999999999999999999998753322
Q ss_pred CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 232 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSIC 232 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHH
Confidence 2345789999999999888999999999999999999999988654332221111110 1123344567899999
Q ss_pred HHhccCCCCCCCCh
Q 011353 290 SRCLQYEPRERPNP 303 (488)
Q Consensus 290 ~~cl~~~p~~Rps~ 303 (488)
.+||+.+|.+|++.
T Consensus 233 ~~~l~~~p~~R~~~ 246 (323)
T cd05615 233 KGLMTKHPSKRLGC 246 (323)
T ss_pred HHHcccCHhhCCCC
Confidence 99999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=317.47 Aligned_cols=240 Identities=24% Similarity=0.355 Sum_probs=193.5
Q ss_pred cCCCCCCCeEEEEEeC-C-------CCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 64 EHGEKAPNVVYKGKLE-N-------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.||.|+||.||+|... . ...||+|.+........+.+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 5799999999999853 2 2348889886554444567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC--------eeeecCCCccccC
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--------PRLSCFGLMKNSR 207 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--------~kl~DfGla~~~~ 207 (488)
++|+|.+++.... ..+++..+..++.||+.||.|||++ +++||||||+||+++.++. ++++|||++....
T Consensus 82 ~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 82 KFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK-GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred CCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 9999999997533 3589999999999999999999998 9999999999999987765 6999999987766
Q ss_pred CCCccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 208 DGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 208 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
......+++.|+|||++.+. .++.++|||||||++|+|++|..+|............. .. ....+...+.++.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~ 233 (258)
T cd05078 160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY----ED--RHQLPAPKWTELA 233 (258)
T ss_pred CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH----Hc--cccCCCCCcHHHH
Confidence 65566778899999999864 47999999999999999999965443321111110000 00 1123333456799
Q ss_pred HHHHHhccCCCCCCCChHHHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
+++.+||+.+|++|||++++++.|+
T Consensus 234 ~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 234 NLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHhccChhhCCCHHHHHHhcC
Confidence 9999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=319.85 Aligned_cols=247 Identities=18% Similarity=0.244 Sum_probs=205.3
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
...|.+++.||.|+||.||+|. ..++..||+|.+..........+.+|+.+++.++|+||+++++.+......++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 4578888899999999999999 457889999999876655567789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++++|.+++.. ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... .
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~-gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (296)
T cd06654 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (296)
T ss_pred cCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence 999999999853 4589999999999999999999998 9999999999999999999999999998754332 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+++.|+|||.+.+..++.++|||||||++|+|++|+.||............. .........+...+..+.+++.
T Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~ 251 (296)
T cd06654 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDFLN 251 (296)
T ss_pred cccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHh---cCCCCCCCCccccCHHHHHHHH
Confidence 3457889999999998889999999999999999999999886543211110000 0000011123345678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||..+|++|||+.+++++
T Consensus 252 ~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 252 RCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHCcCCcccCcCHHHHhhC
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=317.09 Aligned_cols=248 Identities=21% Similarity=0.338 Sum_probs=198.2
Q ss_pred cccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
+|++.+.||+|+||.||+|... .+..||||+++.... .....+.+|+.+++.++||||+++++++.+....++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l 86 (277)
T cd05062 7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 86 (277)
T ss_pred HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEE
Confidence 4567778899999999998742 256799999865332 234568899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCC
Q 011353 131 VAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGl 202 (488)
||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||+
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~vH~dlkp~Nil~~~~~~~~l~dfg~ 165 (277)
T cd05062 87 IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCcchheEEEcCCCCEEECCCCC
Confidence 999999999999986422 12367889999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccC
Q 011353 203 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (488)
Q Consensus 203 a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||............... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~~ 240 (277)
T cd05062 166 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-----GLL 240 (277)
T ss_pred ccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CcC
Confidence 87543321 2234678999999998889999999999999999999 56666543322211111110 011
Q ss_pred CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
..+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 241 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 123345678999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=333.47 Aligned_cols=244 Identities=12% Similarity=0.122 Sum_probs=195.6
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|++++.||+|+||.||++. ..+++.||||+++... ......+.+|+.++..++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 46778888999999999999 4568999999996432 2234568889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|++||+|.+++.. .+.+++..+..++.|++.||.|||+. |++||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~-givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 82 FLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQL-GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred CCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 9999999999964 34689999999999999999999998 9999999999999999999999999998643211
Q ss_pred -----------------------------------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCc
Q 011353 210 -----------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254 (488)
Q Consensus 210 -----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 254 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 123578999999999999999999999999999999999998865
Q ss_pred hhhHHHhhccccccccccccCCCC--hHHHHHHHHHHHHhccCCCCCCCC---hHHHHHH
Q 011353 255 HALDLIRDRNIQTLTDSCLEGQFS--SDEGTELVRLASRCLQYEPRERPN---PRSLVTA 309 (488)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~~p~~Rps---~~~il~~ 309 (488)
............ ..... .++ ...+.++.+++.+|+. +|.+|++ +.++++|
T Consensus 239 ~~~~~~~~~i~~-~~~~~---~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ETPQETYRKVMN-WKETL---VFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCHHHHHHHHHc-CCCce---ecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 433222111110 00000 011 1245688999998774 9999985 5666655
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=311.35 Aligned_cols=247 Identities=22% Similarity=0.324 Sum_probs=201.5
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
++++.+.||.|++|.||++...++..||+|.+.... ...+.+.+|+.+++.++|+|++++++++. .+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 466778889999999999997777789999987543 23467899999999999999999999875 4568999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----cc
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SY 212 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-----~~ 212 (488)
++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM-NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence 9999999765455689999999999999999999998 99999999999999999999999999987654322 12
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
.++..|+|||.+.+..++.++|||||||++|+|+| |..||............... .....+...+..+.+++.+
T Consensus 164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05069 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-----YRMPCPQGCPESLHELMKL 238 (260)
T ss_pred ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCcccCHHHHHHHHH
Confidence 34567999999998889999999999999999999 77776554322211111111 1112233456789999999
Q ss_pred hccCCCCCCCChHHHHHHHHh
Q 011353 292 CLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~ 312 (488)
||..+|++||++.++++.|+.
T Consensus 239 ~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 239 CWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HccCCcccCcCHHHHHHHHhc
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-41 Score=316.40 Aligned_cols=238 Identities=24% Similarity=0.360 Sum_probs=189.7
Q ss_pred cCCCCCCCeEEEEEeCC-------------------------CCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccE
Q 011353 64 EHGEKAPNVVYKGKLEN-------------------------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL 118 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 118 (488)
.||+|+||.||+|.... ...|++|.+..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 57999999999997311 24589999875543345568899999999999999999
Q ss_pred EEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-----
Q 011353 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----- 193 (488)
Q Consensus 119 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----- 193 (488)
++++.+....++||||+++|+|..++... .+.+++..+..++.||+.||.|||++ +++||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDK-NLVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcC-CccCCCCCcccEEEeccCcccCc
Confidence 99999999999999999999999998642 34689999999999999999999998 999999999999997544
Q ss_pred --CeeeecCCCccccCCCCccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHH-hCCCCCCchhhHHHhhccccccc
Q 011353 194 --NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLL-SGKHIPPSHALDLIRDRNIQTLT 269 (488)
Q Consensus 194 --~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~-tg~~p~~~~~~~~~~~~~~~~~~ 269 (488)
.+|++|||++..........++..|+|||.+.+ ..++.++|||||||++|||+ +|..|+........... .
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-----~ 234 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-----Y 234 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-----H
Confidence 379999999866544445567888999998875 45899999999999999995 67776654322111110 0
Q ss_pred cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
.. ....+......+.+++.+||+.+|++|||+.++++.|
T Consensus 235 ~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 235 EK--KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred Hh--ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 00 0111222345799999999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=317.04 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=199.2
Q ss_pred cccccCCCCCCCeEEEEEe-----CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeEEE
Q 011353 60 NIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLV 131 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 131 (488)
.+++.||.|+||+||++.. .++..||+|.++.... .....+.+|+++++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6778889999999988652 3577899999976532 2355688999999999999999999988654 458899
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||+++++|.+++.. ..+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||+++......
T Consensus 87 ~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 999999999999954 3599999999999999999999998 99999999999999999999999999987654322
Q ss_pred ------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhH---HHhhc-------ccccccccccc
Q 011353 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD---LIRDR-------NIQTLTDSCLE 274 (488)
Q Consensus 211 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~---~~~~~-------~~~~~~~~~~~ 274 (488)
...++..|+|||.+.+..++.++||||||+++|+|+||..|+...... ..... ...........
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 123456799999998888999999999999999999999876432111 01000 00011111111
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
...+...+..+.+++..||+.+|++|||+.++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1223445678999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=319.68 Aligned_cols=247 Identities=19% Similarity=0.267 Sum_probs=199.8
Q ss_pred cccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc---HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
++.+.||+|+||.||++. ..+++.||||.+....... ...+.+|+.+++.++|+||+.+++.+.+.+..++||||+
T Consensus 3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05630 3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 82 (285)
T ss_pred eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEec
Confidence 445667999999999999 4568899999987543222 345788999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC---cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---SY 212 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---~~ 212 (488)
++++|.+++.......+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++....... ..
T Consensus 83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05630 83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 161 (285)
T ss_pred CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence 999999998654445699999999999999999999998 99999999999999999999999999987654332 24
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.++..|+|||++.+..++.++|||||||++|+|++|+.||......... .......... ...++...+.++.+|+..|
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05630 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKEV-QEEYSEKFSPDARSLCKML 239 (285)
T ss_pred CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhhhh-hhhcCccCCHHHHHHHHHH
Confidence 6789999999999888999999999999999999999888653211000 0011111110 1122334567899999999
Q ss_pred ccCCCCCCCC-----hHHHHHH
Q 011353 293 LQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 293 l~~~p~~Rps-----~~~il~~ 309 (488)
|+.||++||| +.++++|
T Consensus 240 l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 240 LCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred hhcCHHHccCCCCCchHHHHcC
Confidence 9999999999 7888886
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=318.26 Aligned_cols=251 Identities=22% Similarity=0.311 Sum_probs=203.2
Q ss_pred cccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
++++++.||+|+||.||++... +...+|+|.+..... .....+.+|+.++..+ +|+||+++++++...+..+
T Consensus 13 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 92 (293)
T cd05053 13 RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLY 92 (293)
T ss_pred HeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeE
Confidence 4567788899999999999853 236899999875432 2345688999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCe
Q 011353 130 LVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (488)
+||||+++|+|.+++... ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+
T Consensus 93 li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~Nil~~~~~~~ 171 (293)
T cd05053 93 VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVM 171 (293)
T ss_pred EEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CccccccceeeEEEcCCCeE
Confidence 999999999999998642 234689999999999999999999998 99999999999999999999
Q ss_pred eeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccc
Q 011353 196 RLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTL 268 (488)
Q Consensus 196 kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 268 (488)
||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..|++..............
T Consensus 172 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~- 250 (293)
T cd05053 172 KIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG- 250 (293)
T ss_pred EeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC-
Confidence 999999988654321 1223567999999988889999999999999999998 87777654322221111111
Q ss_pred ccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
.....+...+..+.+|+.+||..+|++|||+.++++.|+.+.
T Consensus 251 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 251 ----YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ----CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111223345678999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=318.05 Aligned_cols=256 Identities=17% Similarity=0.203 Sum_probs=205.3
Q ss_pred HHHHhcCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe
Q 011353 49 LRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (488)
Q Consensus 49 ~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 127 (488)
+++-....+.|++++.||.|+||.||+|.. .++..|++|.+........+.+.+|+.+++.++||||+++++.+...+.
T Consensus 4 ~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 83 (292)
T cd06644 4 VRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGK 83 (292)
T ss_pred hhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCe
Confidence 344444556788999999999999999995 5588999999986655556678999999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+++++|..++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus 84 ~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 84 LWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV 161 (292)
T ss_pred EEEEEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcC-CeeecCCCcceEEEcCCCCEEEccCccceecc
Confidence 99999999999999887543 34689999999999999999999998 99999999999999999999999999886533
Q ss_pred CC----CccccCCCCCCcccccc-----CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC
Q 011353 208 DG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 208 ~~----~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
.. ....+++.|+|||++.+ ..++.++|||||||++|+|++|..||............. ....+ ....+
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~~--~~~~~ 238 (292)
T cd06644 162 KTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KSEPP--TLSQP 238 (292)
T ss_pred ccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHh-cCCCc--cCCCC
Confidence 22 23456789999999853 346889999999999999999998775432111110000 00000 01123
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+.++.+++.+||..+|++||++.+++++
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 239 SKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 3456789999999999999999999999876
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=338.21 Aligned_cols=252 Identities=17% Similarity=0.148 Sum_probs=207.1
Q ss_pred cccccccCCCCCCCeEEEEEeCCC-CEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEE-ee------CCee
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCC-CE------GDER 128 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~-~~------~~~~ 128 (488)
..+|.+.|.+|+|+.||+|....+ ..||+|++-..+....+...+||++|++|+ |+|||.+++.. .. .-.+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 566778889999999999996554 999999998777667788999999999996 99999999932 11 1357
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
+|.||||.||+|-+++..+....|++..+++|++|+++|+.+||.. ..|||||||-+||||+.+|+.||||||.|...-
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~ 197 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKI 197 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccccc
Confidence 8999999999999999866566699999999999999999999987 359999999999999999999999999986432
Q ss_pred CCC-------------ccccCCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccc
Q 011353 208 DGR-------------SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 271 (488)
Q Consensus 208 ~~~-------------~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 271 (488)
... ...+|+-|+|||++. +...+.|+|||+|||+||-|+....||.....-.+..+...
T Consensus 198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~----- 272 (738)
T KOG1989|consen 198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYS----- 272 (738)
T ss_pred CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEecccc-----
Confidence 211 124689999999885 56799999999999999999999999876532222222211
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
-...+..+..+.+||..||+.||++||++-+++..+-.+....
T Consensus 273 ---~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 273 ---FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ---CCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 1112457899999999999999999999999999988886543
|
|
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=315.82 Aligned_cols=252 Identities=20% Similarity=0.276 Sum_probs=201.0
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCC----EEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQF----RIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~----~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
++++++.||.|+||+||+|. ..++. .||+|.++..... ....+.+|+.++..+.||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~ 86 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLV 86 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEE
Confidence 45677888999999999998 44444 4899998754332 35568899999999999999999999875 457899
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 211 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 211 (488)
+||+++|+|.+++... ...+++..++.++.||+.||.|||++ +++||||||+|||+++++.+||+|||+++.......
T Consensus 87 ~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~-~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~ 164 (279)
T cd05109 87 TQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEV-RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 164 (279)
T ss_pred EEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCCCcEEECCCCceeecccccc
Confidence 9999999999999653 34589999999999999999999998 999999999999999999999999999886543221
Q ss_pred ------cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 212 ------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 212 ------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
..+++.|+|||.+.+..++.++|||||||++|||++ |..||.......... .+........+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 239 (279)
T cd05109 165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD-----LLEKGERLPQPPICTID 239 (279)
T ss_pred eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHHCCCcCCCCccCCHH
Confidence 223567999999998889999999999999999998 776664432211111 11111111122345678
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+.+++.+||..||++||++.+++..|..+...+
T Consensus 240 ~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 240 VYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 999999999999999999999999998887654
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=315.69 Aligned_cols=248 Identities=20% Similarity=0.304 Sum_probs=199.3
Q ss_pred cccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.+.+++.||+|+||.||+|... .+..||+|.+...... ....|.+|+.+++.++|+||+++++++.+.+..++
T Consensus 7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (277)
T cd05036 7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFI 86 (277)
T ss_pred HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEE
Confidence 4566777899999999999953 4678999998754322 24568999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC---CeeeecCCC
Q 011353 131 VAEYMPNDTLAKHLFHWET-----QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGL 202 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~DfGl 202 (488)
||||+++++|.+++..... ..+++..++.++.||+.||.|||++ +++|+||||+||+++.++ .+||+|||+
T Consensus 87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~nil~~~~~~~~~~kl~dfg~ 165 (277)
T cd05036 87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRVAKIADFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchheEEEeccCCCcceEeccCcc
Confidence 9999999999999965321 2589999999999999999999998 999999999999998654 599999999
Q ss_pred ccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccC
Q 011353 203 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (488)
Q Consensus 203 a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
++...... ....+..|+|||++.+..++.++|||||||++|||++ |..||........... +......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~-----~~~~~~~ 240 (277)
T cd05036 166 ARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEF-----VTGGGRL 240 (277)
T ss_pred ccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-----HHcCCcC
Confidence 88653221 1122467999999998889999999999999999997 8877765432222111 1111112
Q ss_pred CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
..+...+..+.+++.+||+.+|++|||+.+++++|+
T Consensus 241 ~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 241 DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 233445678999999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=311.52 Aligned_cols=245 Identities=16% Similarity=0.203 Sum_probs=203.9
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
|++++.||.|+||.||++. ..++..+|+|.++... ....+.+.+|+.+++.++|+||+++++.+.+.+..++||||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 5677889999999999999 4568899999986432 2345678899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~ 212 (488)
+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++...... ...
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (255)
T cd08219 82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK-RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY 160 (255)
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence 99999998765556689999999999999999999998 9999999999999999999999999998765432 234
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.+++.|+|||++.+..++.++||||||+++|+|++|..||................ ....+...+..+.+++.+|
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~ 235 (255)
T cd08219 161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS-----YKPLPSHYSYELRSLIKQM 235 (255)
T ss_pred cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC-----CCCCCcccCHHHHHHHHHH
Confidence 57888999999998889999999999999999999999887543322211111111 1112334567799999999
Q ss_pred ccCCCCCCCChHHHHHH
Q 011353 293 LQYEPRERPNPRSLVTA 309 (488)
Q Consensus 293 l~~~p~~Rps~~~il~~ 309 (488)
|+.||++|||+.+++..
T Consensus 236 l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 236 FKRNPRSRPSATTILSR 252 (255)
T ss_pred HhCCcccCCCHHHHhhc
Confidence 99999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=325.61 Aligned_cols=232 Identities=19% Similarity=0.234 Sum_probs=188.6
Q ss_pred cCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHH-HHhccCCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||.|+||.||+|.. .+++.||+|++..... .....+..|.. +++.++||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999995 5688999999864321 12334555554 678889999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~ 214 (488)
+|...+.. ...+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++.... .....+
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 82 ELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 99988864 34688999999999999999999998 999999999999999999999999999875322 123457
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|||++|..||............... ....+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK------PLQLPGGKTVAACDLLVGLLH 232 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 89999999999888999999999999999999999988765433222221111 112333456789999999999
Q ss_pred CCCCCCCChH
Q 011353 295 YEPRERPNPR 304 (488)
Q Consensus 295 ~~p~~Rps~~ 304 (488)
.+|.+||+..
T Consensus 233 ~~p~~R~~~~ 242 (321)
T cd05603 233 KDQRRRLGAK 242 (321)
T ss_pred CCHhhcCCCC
Confidence 9999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=330.39 Aligned_cols=238 Identities=18% Similarity=0.315 Sum_probs=203.3
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHh
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~ 142 (488)
.||+|.||+||-|+ ..+...+|||.+........+-+..||.+.+.|+|.|||+++|.+.+++++-|.||-+|||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 36999999999999 56788899999987766666779999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC-CCCCeeeecCCCccccC----CCCccccC
Q 011353 143 HLFHWETQPM--KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSR----DGRSYSTN 215 (488)
Q Consensus 143 ~l~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~DfGla~~~~----~~~~~~~~ 215 (488)
+|+. +=+++ ++.++-.+.+||++||.|||++ .|||||||-+|||++ -.|.+||+|||.+++.- -..+..||
T Consensus 662 LLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen-~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGT 739 (1226)
T KOG4279|consen 662 LLRS-KWGPLKDNESTMNFYTKQILEGLKYLHEN-KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGT 739 (1226)
T ss_pred HHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhc-ceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccc
Confidence 9975 23456 7888999999999999999999 999999999999995 67899999999877643 23466889
Q ss_pred CCCCCccccccCC--CCCCccchhhHHHHHHHHhCCCCCCchhhH---HHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 216 LAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALD---LIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 216 ~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..|||||++..+. |...+|||||||++.||.||++||...... +++.+-. ...+.+|...+.++..||.
T Consensus 740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmy------KvHP~iPeelsaeak~Fil 813 (1226)
T KOG4279|consen 740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMY------KVHPPIPEELSAEAKNFIL 813 (1226)
T ss_pred hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcce------ecCCCCcHHHHHHHHHHHH
Confidence 9999999998765 899999999999999999999888543211 1111111 1234577889999999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+|+..+|.+||++.+++..
T Consensus 814 rcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 814 RCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHcCCCcccCccHHHhccC
Confidence 9999999999999999975
|
|
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=316.00 Aligned_cols=251 Identities=20% Similarity=0.283 Sum_probs=202.5
Q ss_pred ccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
+++.+.||+|+||.||+|... +...+++|.+..... ....++.+|+.+++.++||||+++++.+...+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 456778899999999999842 235799999875442 2345789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee
Q 011353 132 AEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill 189 (488)
+||+.+|+|.+++.... ...+++..++.++.|++.||.|||+. +++||||||+|||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~ivH~dikp~nill 160 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM-KLVHRDLAARNVLV 160 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC-CeehhhhhhheEEE
Confidence 99999999999985321 13578999999999999999999998 99999999999999
Q ss_pred CCCCCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhh
Q 011353 190 DDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD 262 (488)
Q Consensus 190 ~~~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~ 262 (488)
++++.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|||+| |..||.......+..
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~ 240 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN 240 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 999999999999987543221 1234568999999988889999999999999999999 887776543222211
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.. ........+...+.++.+++..||+.+|++||++.++++.|+.+..
T Consensus 241 ~~-----~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 241 LL-----KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HH-----hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 11 1111112233456789999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=320.04 Aligned_cols=254 Identities=21% Similarity=0.296 Sum_probs=204.8
Q ss_pred CcccccccCCCCCCCeEEEEEeC--------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 126 (488)
.+|.+.+.||+|+||.||++... +...+|+|.++.... .....+.+|+.++..+ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 35778889999999999999742 235799999985432 2345688899999999 7999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
..++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. |++||||||+||+++.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~~ 176 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED 176 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHHheEEcCC
Confidence 9999999999999999996532 12488999999999999999999998 99999999999999999
Q ss_pred CCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccc
Q 011353 193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (488)
+.+||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||.............
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~ 256 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 256 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH
Confidence 999999999987654321 1223467999999998889999999999999999998 776765433222211111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.......+...+.++.+++.+||..+|.+|||+.++++.|+.+...
T Consensus 257 -----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 257 -----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred -----cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1111123344567899999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=329.79 Aligned_cols=252 Identities=19% Similarity=0.289 Sum_probs=201.1
Q ss_pred cccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCcc-HHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 129 (488)
++.+.+.||+|+||.||+|++. .+..||||+++...... ...+.+|+.+|..+. ||||+++++++...+..+
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~ 117 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY 117 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence 4556788899999999999853 34689999998653322 346889999999997 999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCC------------------------------------------------------------
Q 011353 130 LVAEYMPNDTLAKHLFHWET------------------------------------------------------------ 149 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~------------------------------------------------------------ 149 (488)
+||||+++|+|.++++....
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 99999999999999964311
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC
Q 011353 150 ------------------------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193 (488)
Q Consensus 150 ------------------------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (488)
..+++..++.++.||+.||.|||+. +++||||||+|||+++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrdlkp~NiLl~~~~ 276 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK-NCVHRDLAARNVLICEGK 276 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcCcccCCcceEEEeCCC
Confidence 2367788899999999999999998 999999999999999999
Q ss_pred CeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccc
Q 011353 194 NPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ 266 (488)
Q Consensus 194 ~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 266 (488)
.+||+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |+.|+............
T Consensus 277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~-- 354 (401)
T cd05107 277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNA-- 354 (401)
T ss_pred EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHH--
Confidence 9999999998754321 12345678999999998889999999999999999998 77776543211111000
Q ss_pred ccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
.........+...+..+.+++.+||..+|.+||++.+|++.|+.+.
T Consensus 355 --~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 355 --IKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred --HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0001111233345678999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-42 Score=297.69 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=202.1
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC-CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..+.++++.||.|+.|.|+++. ..+|...|||.+.+.. ....++++..++++... +.|+||+.+|+|..+..++|.|
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence 3455678889999999999999 5568899999998653 33456677788877666 5899999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
|.|.. .++.++++ -.+++++..+-++...++.||.||.++++|||||+||+|||+|+.|++||+|||++.+..+.
T Consensus 171 elMs~-C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh 248 (391)
T KOG0983|consen 171 ELMST-CAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH 248 (391)
T ss_pred HHHHH-HHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence 99843 46666654 45679999999999999999999999889999999999999999999999999999876554
Q ss_pred CccccCCCCCCcccccc---CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
+...|-+.|||||-+.- ..|+.++||||||++|+||.||+.|+.+...+...-..+..-..+.+.+. ...++.++
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~--~gFSp~F~ 326 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGH--MGFSPDFQ 326 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcc--cCcCHHHH
Confidence 44567899999999874 35899999999999999999999999875433322222222112222221 22678999
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+|+..||++|+.+||.+.++++|
T Consensus 327 ~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHHHhhcCcccCcchHHHhcC
Confidence 99999999999999999999987
|
|
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=320.55 Aligned_cols=254 Identities=19% Similarity=0.299 Sum_probs=204.4
Q ss_pred CcccccccCCCCCCCeEEEEEe--------CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 126 (488)
.++.+.+.||+|+||.||++.. .++..||+|.+.... ....+.+.+|+.++..+ +||||+++++++....
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 3566778889999999999973 124579999987543 23356789999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++ |++||||||+||+++.+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nili~~~ 173 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTEN 173 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC-CeeecccccceEEEcCC
Confidence 9999999999999999996532 13478889999999999999999998 99999999999999999
Q ss_pred CCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccc
Q 011353 193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (488)
+.+||+|||+++...... ...+++.|+|||++.+..++.++||||||+++|+|++ |..|+.......+.....
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~ 253 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 253 (304)
T ss_pred CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence 999999999988654321 1234567999999998889999999999999999998 666665443322221111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.. .....+...+..+.+++.+||+.+|.+|||+.++++.|+.+...
T Consensus 254 ~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 254 EG-----HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred cC-----CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 10 11122334567899999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=315.80 Aligned_cols=246 Identities=17% Similarity=0.206 Sum_probs=199.4
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
|++++.||.|+||.||++.. .++..+++|.+..........+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 56778899999999999995 45788999998765544566789999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cccc
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYS 213 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~ 213 (488)
++|..++.+ ...++++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... ....
T Consensus 87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999998754 235699999999999999999999998 9999999999999999999999999998654322 2345
Q ss_pred cCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 214 TNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 214 ~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
++..|+|||++. +..++.++|||||||++|+|++|+.||................. . ....+...+..+.++
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~l 241 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP-P--TLAQPSRWSSEFKDF 241 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC-C--CCCCccccCHHHHHH
Confidence 788999999984 34578899999999999999999988754321111111100000 0 011223356789999
Q ss_pred HHHhccCCCCCCCChHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~ 309 (488)
+.+||+.+|.+|||+.+++++
T Consensus 242 i~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 242 LKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred HHHHccCChhhCcCHHHHhcC
Confidence 999999999999999998877
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=312.09 Aligned_cols=248 Identities=22% Similarity=0.336 Sum_probs=198.2
Q ss_pred cccccCCCCCCCeEEEEEeC-C---CCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCe------
Q 011353 60 NIVSEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE------ 127 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------ 127 (488)
.+.+.||+|+||.||+|... + +..||||.++..... ....+.+|+..++.++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 45677899999999999853 2 368999998754322 24578999999999999999999998866554
Q ss_pred eEEEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 128 RLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
.++||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchheEEECCCCeEEECCccce
Confidence 79999999999999988532 223589999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCCc------cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCC
Q 011353 204 KNSRDGRS------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (488)
Q Consensus 204 ~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
+....... ...+..|+|||.+.+..++.++|||||||++|||++ |..||............... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~ 235 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG-----NRLK 235 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCC
Confidence 86543321 223568999999988889999999999999999999 77666543222211111110 1112
Q ss_pred CChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+...+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2344667899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=329.46 Aligned_cols=253 Identities=17% Similarity=0.138 Sum_probs=200.2
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe
Q 011353 52 ATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (488)
Q Consensus 52 ~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 127 (488)
.......|++++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 344456788889999999999999994 568899999986421 1234457889999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+++|+|.+++.. ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred EEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 9999999999999999853 3588999999999999999999999 99999999999999999999999999987654
Q ss_pred CC-----CccccCCCCCCccccccCC----CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC
Q 011353 208 DG-----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 208 ~~-----~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
.. ....||+.|+|||++.+.. ++.++|||||||++|||++|+.||................ .. ..-...
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~-~~-~~~~~~ 271 (371)
T cd05622 194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK-NS-LTFPDD 271 (371)
T ss_pred cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-Cc-ccCCCc
Confidence 32 2346899999999997543 7889999999999999999999987643321111111100 00 000111
Q ss_pred hHHHHHHHHHHHHhccCCCCC--CCChHHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRE--RPNPRSLVTAL 310 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~--Rps~~~il~~L 310 (488)
...+..+.+++..||...+.+ |+++.+++++.
T Consensus 272 ~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 272 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 245678999999999844433 78999998875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=319.21 Aligned_cols=251 Identities=20% Similarity=0.311 Sum_probs=201.6
Q ss_pred cccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
++.+.+.||+|+||.||++.. ..+..||||.++..... ..+.+.+|+.+++++ +||||+++++++...+..+
T Consensus 36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 115 (302)
T cd05055 36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPIL 115 (302)
T ss_pred HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceE
Confidence 456677789999999999973 12457999998754322 245689999999999 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++|+|.+++.......+++..+..++.|++.||.|||++ +++|+||||+|||++.++.++|+|||+++.....
T Consensus 116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 194 (302)
T cd05055 116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNVLLTHGKIVKICDFGLARDIMND 194 (302)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeehhhhccceEEEcCCCeEEECCCcccccccCC
Confidence 999999999999999754444589999999999999999999998 9999999999999999999999999998765432
Q ss_pred C------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 210 R------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 210 ~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
. ...++..|+|||.+.+..++.++|||||||++|+|+| |..||........... ..........+...+
T Consensus 195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 270 (302)
T cd05055 195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYK----LIKEGYRMAQPEHAP 270 (302)
T ss_pred CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHH----HHHcCCcCCCCCCCC
Confidence 2 1234578999999998889999999999999999998 8877654322111100 011111111222345
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
..+.+++.+||..+|++|||+.++++.|..+
T Consensus 271 ~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 7899999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=311.09 Aligned_cols=254 Identities=19% Similarity=0.242 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..|.+.+.||.|+||.||+|... +++.||+|.++... ......+.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 35667788899999999999954 78999999886432 223557899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||+++++|.+++.+. ....+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 999999999998642 234589999999999999999999998 9999999999999999999999999998765432
Q ss_pred ---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC-hHHHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDEGTEL 285 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 285 (488)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||.......... ...+.. ......+ ...+..+
T Consensus 161 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~ 237 (267)
T cd08224 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEK-CDYPPLPADHYSEEL 237 (267)
T ss_pred cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHH--Hhhhhc-CCCCCCChhhcCHHH
Confidence 22356788999999998889999999999999999999998875432211100 000000 0111112 2456789
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
.+++.+||..+|++|||+.+|++.|+.+.
T Consensus 238 ~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 238 RDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 99999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=323.12 Aligned_cols=248 Identities=15% Similarity=0.170 Sum_probs=193.7
Q ss_pred ccccCCCC--CCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 61 IVSEHGEK--APNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 61 ~i~~lG~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
+++.||+| +||+||++. ..+|+.||||+++..... ..+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45677888 788999998 567899999999764322 2345778999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC-------
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------- 208 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~------- 208 (488)
++|+|.+++.......+++..+..++.|++.||.|||++ +++||||||+|||++.++.++++||+.......
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 999999999654445689999999999999999999998 999999999999999999999999986433211
Q ss_pred ----CCccccCCCCCCcccccc--CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh----hccccccccc-------
Q 011353 209 ----GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----DRNIQTLTDS------- 271 (488)
Q Consensus 209 ----~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----~~~~~~~~~~------- 271 (488)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ........+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 112235677999999976 35889999999999999999999888643211110 0000000000
Q ss_pred -----------------------------cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 -----------------------------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 -----------------------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..........++.+.+|+.+||+.||++|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00000112345689999999999999999999999987
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-41 Score=324.89 Aligned_cols=235 Identities=20% Similarity=0.214 Sum_probs=189.1
Q ss_pred cCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHH-HHhccCCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||+||+|.. .+++.||+|++..... .....+..|.. +++.++||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 579999999999994 5678899999874321 12234444544 567889999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~ 214 (488)
+|.+++.. ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~-giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 82 ELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 99999964 34588889999999999999999998 999999999999999999999999999875322 233468
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
|+.|+|||++.+..++.++|||||||++|+|++|..||............... ....+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSARHLLEGLLQ 232 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CcCCCCCCCHHHHHHHHHHcc
Confidence 99999999999989999999999999999999999988754332221111111 011233456789999999999
Q ss_pred CCCCCCCChHHHH
Q 011353 295 YEPRERPNPRSLV 307 (488)
Q Consensus 295 ~~p~~Rps~~~il 307 (488)
.+|.+||++.+.+
T Consensus 233 ~~p~~R~~~~~~~ 245 (325)
T cd05602 233 KDRTKRLGAKDDF 245 (325)
T ss_pred cCHHHCCCCCCCH
Confidence 9999999987433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=309.31 Aligned_cols=249 Identities=24% Similarity=0.374 Sum_probs=205.7
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.++.+.+.||.|+||.||++...++..||||.+.... .....+.+|+.+++.++|+||+++++++......++||||++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 3567778889999999999998777889999998544 345679999999999999999999999998899999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----c
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-----~ 211 (488)
+++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++....... .
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 163 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG 163 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence 99999999765555799999999999999999999998 99999999999999999999999999987654321 1
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+..|+|||.+.+..++.++||||||+++++++| |+.||................ ....+...+.++.+++.
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~ 238 (261)
T cd05034 164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY-----RMPRPPNCPEELYDLML 238 (261)
T ss_pred cCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHHHHHH
Confidence 223467999999998889999999999999999999 887775533221111111110 11122334678999999
Q ss_pred HhccCCCCCCCChHHHHHHHHh
Q 011353 291 RCLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~ 312 (488)
+||+.+|++||++.++.+.|+.
T Consensus 239 ~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 239 QCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHcccCcccCCCHHHHHHHHhc
Confidence 9999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=327.24 Aligned_cols=249 Identities=16% Similarity=0.198 Sum_probs=195.0
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCC------
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ 126 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 126 (488)
..+|.+++.||+|+||.||++. ..++..||||++.... ......+.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 3577888999999999999999 4568899999997542 223556889999999999999999999986543
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
..++||||+.+ +|.+.+. ..+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++..
T Consensus 100 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~-~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred eeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 47999999976 5777663 3488999999999999999999998 9999999999999999999999999998764
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc------------------cc
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR------------------NI 265 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~------------------~~ 265 (488)
... ....+|+.|+|||++.+..++.++|||||||++|+|+||+.||........... ..
T Consensus 174 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 174 CTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred ccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 332 334678999999999988999999999999999999999988864321000000 00
Q ss_pred cccc---------------cccc---cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 266 QTLT---------------DSCL---EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 266 ~~~~---------------~~~~---~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
.... .... ........+..+.+|+.+||+.||++|||+.++++|-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0000 0000 0001112346789999999999999999999999873
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=310.43 Aligned_cols=242 Identities=20% Similarity=0.278 Sum_probs=194.4
Q ss_pred cCCCCCCCeEEEEEeC---CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
+||+|+||.||+|.+. ++..||+|++...... ..+.+.+|+.+++.++||||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4799999999999753 3557999999765432 2456899999999999999999999885 457899999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc-------c
Q 011353 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-------Y 212 (488)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~-------~ 212 (488)
|.+++... ...+++..+++++.|++.||.|||++ +++|+||||+|||++.++.+||+|||++........ .
T Consensus 81 L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGK-NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhc-CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 99998642 34689999999999999999999998 999999999999999999999999999875433211 1
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
.++..|+|||++.+..++.++|||||||++|++++ |..||.......... .+........+...+.++.+++..
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMS-----FIEQGKRLDCPAECPPEMYALMKD 233 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHH-----HHHCCCCCCCCCCCCHHHHHHHHH
Confidence 22468999999988889999999999999999997 887775432211111 011111122334457889999999
Q ss_pred hccCCCCCCCChHHHHHHHHhh
Q 011353 292 CLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~~ 313 (488)
||..+|++||++.+|.+.|+.+
T Consensus 234 c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 234 CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=318.42 Aligned_cols=252 Identities=17% Similarity=0.249 Sum_probs=201.3
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
+|++++.||.|+||.||++. ..++..+|+|.+...... ...++.+|++++.+++||||+++++++.+++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 46778888999999999999 456888999998754322 2456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--Cccc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~~~ 213 (488)
++++|.+++.. .+.+++..+..++.|++.||.|||+..+++|+||||+|||++.++.++|+|||++...... ....
T Consensus 82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (308)
T cd06615 82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 159 (308)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCC
Confidence 99999999965 3568999999999999999999997448999999999999999999999999998765332 3446
Q ss_pred cCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh---cccccccc--------------------
Q 011353 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---RNIQTLTD-------------------- 270 (488)
Q Consensus 214 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---~~~~~~~~-------------------- 270 (488)
++..|+|||++.+..++.++|||||||++|+|++|+.||.......... ........
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (308)
T cd06615 160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAI 239 (308)
T ss_pred CCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhH
Confidence 7889999999988889999999999999999999998875432111110 00000000
Q ss_pred -----ccc---cCCCC-hHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 271 -----SCL---EGQFS-SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 271 -----~~~---~~~~~-~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
... ....+ ...+.++.+++.+||..+|++|||+.+++++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 240 FELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred HHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 000 00001 124567999999999999999999999998843
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=325.39 Aligned_cols=236 Identities=18% Similarity=0.225 Sum_probs=190.2
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||.||++. ..+++.||||+++.... .....+.+|+.++.++ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 47999999999999 45688999999975422 2344578899999888 6999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcccc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~~~ 214 (488)
+|..++.. .+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 82 DLMFHMQR--QRKLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 99998864 34699999999999999999999998 999999999999999999999999999875321 123568
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH---HhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL---IRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
|+.|+|||++.+..++.++|||||||++|+|+||+.||....... ........+... ...++...+..+.+++.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASHVLKG 236 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHHHHHH
Confidence 999999999998899999999999999999999999884311000 000000000000 112344456789999999
Q ss_pred hccCCCCCCCChH
Q 011353 292 CLQYEPRERPNPR 304 (488)
Q Consensus 292 cl~~~p~~Rps~~ 304 (488)
||..||.+|+++.
T Consensus 237 ~L~~dP~~R~~~~ 249 (327)
T cd05617 237 FLNKDPKERLGCQ 249 (327)
T ss_pred HhccCHHHcCCCC
Confidence 9999999999854
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=318.31 Aligned_cols=250 Identities=18% Similarity=0.242 Sum_probs=206.6
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 53 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.+-...|.+++.||.|+||.||++. ..+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++|
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 3344678889999999999999999 467899999999866555566788999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+++++|.+++.+ ..+++..+..++.|++.||.|||+. +++|+||||+|||++.++.++|+|||++......
T Consensus 95 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~-~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 95 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred ecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 999999999999853 4589999999999999999999998 9999999999999999999999999998765432
Q ss_pred --CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....+++.|+|||.+.+..++.++|||||||++|+|++|..||......... .............+...+..+.+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 247 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL---YLIATNGTPELQNPERLSAVFRD 247 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe---eeeccCCCCCCCCccccCHHHHH
Confidence 2345678999999999888999999999999999999999887543211100 00000011111123345677999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+||+.+|++|||+.+++++
T Consensus 248 li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 248 FLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=315.14 Aligned_cols=245 Identities=18% Similarity=0.248 Sum_probs=197.2
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
++++++.||+|+||.||+|. ..++..||+|.+..... .....+.+|+.++.+++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 45677889999999999998 56788999999865432 23456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--Cccc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~~~ 213 (488)
++++|..+. .+++..+..++.|++.||.|||+. +++|+||||+|||++.++.++|+|||++...... ....
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 154 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV 154 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence 999997653 378889999999999999999998 9999999999999999999999999998765433 3346
Q ss_pred cCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH---HhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL---IRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 214 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
++..|+|||++.+..++.++|||||||++|+|++|+.||....... ......................+.++.+++.
T Consensus 155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (279)
T cd06619 155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT 234 (279)
T ss_pred CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHH
Confidence 7889999999998889999999999999999999998875321100 0000000000010011111224568999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||+.+|++||++.+++++
T Consensus 235 ~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 235 QCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHhhCChhhCCCHHHHhcC
Confidence 9999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=315.29 Aligned_cols=253 Identities=18% Similarity=0.301 Sum_probs=199.2
Q ss_pred ccccccCCCCCCCeEEEEEe-----CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 130 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 130 (488)
+.+++.||+|+||.||++.. .++..||+|.++... ......+.+|+.+++.++||||+++++++.+. ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 46778899999999999973 357889999987543 22345789999999999999999999998775 56899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
||||++|++|.+++... ...+++..+..++.|++.||.|||++ |++||||||+||+++.++.++|+|||+++......
T Consensus 86 v~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~-gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 99999999999998643 23589999999999999999999998 99999999999999999999999999987654321
Q ss_pred -------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh-------cc---ccccccccc
Q 011353 211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-------RN---IQTLTDSCL 273 (488)
Q Consensus 211 -------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-------~~---~~~~~~~~~ 273 (488)
...++..|+|||++.+..++.++|||||||++|+|+|++.|........... .. .........
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK 243 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc
Confidence 2334567999999988889999999999999999999875532211000000 00 000000001
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
....+...+..+.+|+.+||+.+|.+|||+.++++.|+.+
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1112334567899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=306.85 Aligned_cols=241 Identities=25% Similarity=0.394 Sum_probs=198.1
Q ss_pred cCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCcc-HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHh
Q 011353 64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~ 142 (488)
.||.|+||.||+|...++..||+|.++...... ...+.+|+.+++.++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 469999999999998788899999987654322 3468899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----ccccCCC
Q 011353 143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SYSTNLA 217 (488)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-----~~~~~~~ 217 (488)
++... ...+++..+..++.|++.+|.|||+. +++|+||||+||+++.++.+||+|||++....... ...+++.
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 82 FLRKK-KDELKTKQLVKFALDAAAGMAYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 98653 34589999999999999999999998 99999999999999999999999999987543321 1223567
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCC
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 296 (488)
|+|||++.+..++.++||||||+++|++++ |..||............... .....+...+..+.+++.+||..+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-----YRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHcccC
Confidence 999999998889999999999999999998 88777654322221111111 111223345678999999999999
Q ss_pred CCCCCChHHHHHHHH
Q 011353 297 PRERPNPRSLVTALV 311 (488)
Q Consensus 297 p~~Rps~~~il~~L~ 311 (488)
|++|||+.++++.|.
T Consensus 235 p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 235 PENRPKFSELQKELA 249 (250)
T ss_pred cccCCCHHHHHHHhc
Confidence 999999999998874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=323.34 Aligned_cols=249 Identities=18% Similarity=0.149 Sum_probs=196.1
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|++++.||+|+||+||++. ..+++.||||+++... ......+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 57788899999999999999 4568899999986421 1234558889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC---
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~--- 210 (488)
|+++|+|.+++.+. ...+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 82 YYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQL-GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred cCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 99999999999642 34589999999999999999999999 99999999999999999999999999987654322
Q ss_pred --ccccCCCCCCcccccc-----CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 211 --SYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 211 --~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
...+|+.|+|||++.. ..++.++|||||||++|+|++|+.||............... .............+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~ 238 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH-KEHFQFPPDVTDVSE 238 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcC-CCcccCCCccCCCCH
Confidence 2357999999999873 45788999999999999999999998654322111111100 000000011122567
Q ss_pred HHHHHHHHhccCCCC--CCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPR--ERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~--~Rps~~~il~~ 309 (488)
.+.+++.+|+..++. .||++.++++|
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 239 EAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 889999998865443 37899999988
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=310.52 Aligned_cols=246 Identities=21% Similarity=0.254 Sum_probs=189.7
Q ss_pred cCCCCCCCeEEEEEeCC---CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 64 EHGEKAPNVVYKGKLEN---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
.||+|+||.||+|...+ +..+|+|.++..... ....+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 57999999999998533 467999998765422 23468899999999999999999999999999999999999999
Q ss_pred HHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC------
Q 011353 140 LAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------ 210 (488)
Q Consensus 140 L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~------ 210 (488)
|.+++.... ....++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN-NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD 160 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence 999996422 22467788889999999999999998 99999999999999999999999999987543321
Q ss_pred ccccCCCCCCccccccC-------CCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 211 SYSTNLAFTPPEYLRTG-------RVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~-------~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
...++..|+|||++.+. .++.++||||||+++|||++ |..||.............................+
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (269)
T cd05087 161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLS 240 (269)
T ss_pred CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCC
Confidence 23356789999998642 35789999999999999996 98887643222111111111111111111222345
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
..+.+++..|| .+|++|||+.+|++.|.
T Consensus 241 ~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 241 DRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred hHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 67899999999 68999999999998864
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=309.00 Aligned_cols=242 Identities=22% Similarity=0.297 Sum_probs=197.0
Q ss_pred cCCCCCCCeEEEEEeCC--C--CEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKLEN--Q--FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|++|.||+|.+.+ + ..||||.+..... ...+.+.+|+.++++++||||+++++++.. ...++||||++++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 46999999999998533 3 3699999987665 446679999999999999999999999988 8899999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-------Cc
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------RS 211 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-------~~ 211 (488)
+|.+++.......+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++...... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC-CccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 999999764435689999999999999999999998 9999999999999999999999999998765432 12
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..++..|+|||.+.+..++.++|||||||++|+|+| |..|+.............. .......+...+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK----EGERLERPEACPQDIYNVML 235 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh----cCCcCCCCccCCHHHHHHHH
Confidence 335678999999998889999999999999999999 8887743322111111110 00011122335678999999
Q ss_pred HhccCCCCCCCChHHHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~ 311 (488)
+||+.+|++|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 236 QCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHCCCCcccCCCHHHHHHHhc
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=327.78 Aligned_cols=248 Identities=15% Similarity=0.212 Sum_probs=195.7
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeC------C
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------D 126 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 126 (488)
+.+|++++.||+|+||.||++. ...++.||||++..... .....+.+|+.+++.++||||+++++++... .
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 4577888899999999999998 45688999999975432 2345688999999999999999999998643 3
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
..++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+. |++||||||+|||++.++.+||+|||+++..
T Consensus 96 ~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 96 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred eeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 47999999976 6777773 3488999999999999999999998 9999999999999999999999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc------------------cc
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR------------------NI 265 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~------------------~~ 265 (488)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+......... ..
T Consensus 170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred CCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 443 234678999999999988899999999999999999999998865321100000 00
Q ss_pred ccccc----------------ccc--cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 QTLTD----------------SCL--EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 ~~~~~----------------~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... ... ....+...+..+.+|+.+||+.||++|||+.+++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000 000 001112234678999999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=324.87 Aligned_cols=248 Identities=15% Similarity=0.201 Sum_probs=195.4
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeC------C
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------D 126 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 126 (488)
..+|.+++.||+|+||.||++. ...++.||||++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 3567888899999999999999 4568899999997542 22345688999999999999999999987543 3
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
..++||||+++ +|.+.+. ..+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred eEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 57999999976 6877773 3488999999999999999999998 9999999999999999999999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccc----------------
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT---------------- 267 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---------------- 267 (488)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||...............
T Consensus 177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred CCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 443 3346789999999999989999999999999999999999988653211100000000
Q ss_pred -----------------cccccc---cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 -----------------LTDSCL---EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 -----------------~~~~~~---~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+..... ........+..+.+++.+||+.||.+|||+.++++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 000111124578999999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=317.20 Aligned_cols=250 Identities=15% Similarity=0.160 Sum_probs=193.7
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhcc---CCCCcccEEEEEee-----CC
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCE-----GD 126 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~~ 126 (488)
.|++++.||+|+||+||+|. ..+++.||+|.++..... ....+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 36778889999999999999 457899999998754222 234566787777766 69999999998864 24
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
..++||||+++ +|.+++.......+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 57999999975 899988764455689999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc--------ccccc------
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------IQTLT------ 269 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--------~~~~~------ 269 (488)
... ....++..|+|||++.+..++.++|||||||++|+|++|+.||............ ...+.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence 433 2345688999999999888999999999999999999999877543211100000 00000
Q ss_pred ccccc-------CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 DSCLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 ~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... ....+..+..+.+++.+||+.||++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 00112345678999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=312.54 Aligned_cols=247 Identities=15% Similarity=0.172 Sum_probs=199.5
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.|.+++.||+|+||.||+|. ..+++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++||||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 56777888999999999999 45688999999876554445568899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~ 212 (488)
+++|.+++.. .+.+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...... ...
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06645 90 GGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF 166 (267)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccc
Confidence 9999999864 34689999999999999999999998 9999999999999999999999999998754322 334
Q ss_pred ccCCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH-HhhccccccccccccCCCChHHHHHHHHH
Q 011353 213 STNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 213 ~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
.++..|+|||++. ...++.++|||||||++|+|++|..|+....... ............... .....+..+.++
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 244 (267)
T cd06645 167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFHHF 244 (267)
T ss_pred cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHHHH
Confidence 6789999999974 4558889999999999999999998875432111 100000011111110 011245679999
Q ss_pred HHHhccCCCCCCCChHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~ 309 (488)
+.+||+.+|++|||+.+++++
T Consensus 245 i~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 245 VKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHccCCchhCcCHHHHhcC
Confidence 999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=308.50 Aligned_cols=242 Identities=30% Similarity=0.431 Sum_probs=201.2
Q ss_pred cCCCCCCCeEEEEEeC-C---CCEEEEEEcCCCCCcc-HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||.|+||.||+|... . +..|++|.++...... ...+.+|+..+..++|+||+++++++.+....++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 5799999999999953 3 7899999998665333 567999999999999999999999999999999999999999
Q ss_pred CHHhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 139 TLAKHLFHWE-------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 139 sL~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
+|.+++.... ...+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+|||.+......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC-CcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 9999997631 35689999999999999999999998 9999999999999999999999999999876543
Q ss_pred ----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
....++..|+|||.+.+..++.++|||||||++|+|++ |..||.............. ......+...+.+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 235 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-----GYRLPKPEYCPDE 235 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCChH
Confidence 23345788999999998889999999999999999999 5777655422222111111 1111233445788
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
+.+++.+||..+|.+|||+.+++++|+
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 236 LYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=309.05 Aligned_cols=246 Identities=18% Similarity=0.183 Sum_probs=204.2
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|++++.||.|+||.||.+. ..++..+++|.+.... ......+.+|+.++++++|+||+++++++.+.+..+++|||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 6677888999999999999 5668899999986543 233567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----c
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----~ 211 (488)
++++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++....... .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA-GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 999999999765455689999999999999999999998 99999999999999999999999999987654332 3
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..+++.|+|||.+.+..++.++||||||+++|+|++|..||................. ...+...+..+.+++.+
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~ 235 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY-----TPVVSVYSSELISLVHS 235 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-----CCCccccCHHHHHHHHH
Confidence 4578899999999988889999999999999999999988765432221111111111 11123356789999999
Q ss_pred hccCCCCCCCChHHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L 310 (488)
||..+|.+|||+.++++++
T Consensus 236 ~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 236 LLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HcccCcccCCCHHHHhhCc
Confidence 9999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=312.05 Aligned_cols=247 Identities=23% Similarity=0.319 Sum_probs=194.6
Q ss_pred ccccCCCCCCCeEEEEEeCC-CC--EEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeC------CeeE
Q 011353 61 IVSEHGEKAPNVVYKGKLEN-QF--RIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERL 129 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~ 129 (488)
+.+.||+|+||.||+|...+ +. .||+|.++... ......+.+|+.+++.++|+||+++++++... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 45678999999999999544 33 69999987542 22355688999999999999999999987532 2468
Q ss_pred EEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 130 LVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
+||||+++|+|.+++... ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++.
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhheEEcCCCCEEECCCCcccc
Confidence 999999999999987421 234589999999999999999999998 999999999999999999999999999886
Q ss_pred cCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCC
Q 011353 206 SRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 206 ~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
..... ...+++.|++||++.+..++.++|||||||++|||++ |+.||.............. ......+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~ 236 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ-----GNRLKQP 236 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----CCCCCCC
Confidence 54322 2234568999999998889999999999999999999 6777654322211111100 0001123
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 237 PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 34567799999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=315.28 Aligned_cols=254 Identities=19% Similarity=0.274 Sum_probs=200.1
Q ss_pred CcccccccCCCCCCCeEEEEEeCC-----------------CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN-----------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANL 118 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l 118 (488)
.+++++++||+|+||.||++.... +..||+|.+...... ....+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 367888999999999999988432 246899998765432 35578899999999999999999
Q ss_pred EEEEeeCCeeEEEEecCCCCCHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee
Q 011353 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189 (488)
Q Consensus 119 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill 189 (488)
++++...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +++|+||||+||++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~-~i~H~dlkp~Nili 163 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL-NFVHRDLATRNCLV 163 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc-Cccccccchhceee
Confidence 999999999999999999999999996532 12589999999999999999999998 99999999999999
Q ss_pred CCCCCeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh--CCCCCCchhhHHHh
Q 011353 190 DDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIR 261 (488)
Q Consensus 190 ~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~~~~~ 261 (488)
+.++.++|+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++ |..|+.........
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~ 243 (296)
T cd05051 164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVI 243 (296)
T ss_pred cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHH
Confidence 99999999999998764332 12234678999999998889999999999999999998 44454332211111
Q ss_pred hcccccc--ccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 262 DRNIQTL--TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 262 ~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
....... .........+...+.++.+++.+||+.+|.+|||+.+|++.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 244 ENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1110000 0000011122335578999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=310.94 Aligned_cols=247 Identities=20% Similarity=0.276 Sum_probs=188.2
Q ss_pred ccCCCCCCCeEEEEEeCC---CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 63 SEHGEKAPNVVYKGKLEN---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
++||+|+||.||+|...+ ...+++|.+...... ....+.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 357999999999997433 357889987654322 2456889999999999999999999999999999999999999
Q ss_pred CHHhhhccCCC---CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC------
Q 011353 139 TLAKHLFHWET---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------ 209 (488)
Q Consensus 139 sL~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~------ 209 (488)
+|.+++..... ...++..+..++.||+.||.|||+. +++||||||+|||+++++.+||+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc-CEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 99999965322 2356788899999999999999998 9999999999999999999999999998653222
Q ss_pred CccccCCCCCCcccccc-------CCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 210 RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
....+++.|+|||++.. ..++.++|||||||++|||++ |..|+.........................+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence 12234567999998753 346889999999999999999 5655544321111111111111111112233345
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
+..+.+++..|| .||++|||+.+|++.|.
T Consensus 240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 240 SDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 677889999999 59999999999998863
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=316.41 Aligned_cols=255 Identities=20% Similarity=0.274 Sum_probs=198.0
Q ss_pred CcccccccCCCCCCCeEEEEEeCC---------------CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN---------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLG 120 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~ 120 (488)
.+|++.+.||+|+||.||++.... ...||||.++..... ....|.+|++++..++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 367888999999999999987432 235899999764322 2446899999999999999999999
Q ss_pred EEeeCCeeEEEEecCCCCCHHhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC
Q 011353 121 CCCEGDERLLVAEYMPNDTLAKHLFHWE----------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190 (488)
Q Consensus 121 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~ 190 (488)
++...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +++|+||||+||+++
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nill~ 163 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL-NFVHRDLATRNCLVG 163 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc-CeeccccChhhEEEc
Confidence 9999999999999999999999985421 12368899999999999999999998 999999999999999
Q ss_pred CCCCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhC--CCCCCchhhHHHhh
Q 011353 191 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG--KHIPPSHALDLIRD 262 (488)
Q Consensus 191 ~~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg--~~p~~~~~~~~~~~ 262 (488)
+++.+||+|||++....... ...++..|+|||++.++.++.++|||||||++++|+++ ..||..........
T Consensus 164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 243 (295)
T cd05097 164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE 243 (295)
T ss_pred CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHH
Confidence 99999999999987643321 12335689999999988899999999999999999984 44544322211111
Q ss_pred cccccc--ccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHh
Q 011353 263 RNIQTL--TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 263 ~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 312 (488)
...... .........+...+..+.+|+.+||+.+|++|||+.+|++.|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 244 NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 100000 00000011222346789999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=315.37 Aligned_cols=247 Identities=17% Similarity=0.246 Sum_probs=204.7
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
...|.+++.||.|++|.||+|. ..+++.|++|.+..........+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 3458888899999999999998 567899999999766555567789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++++|.+++.. ..+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...... .
T Consensus 98 ~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~-~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (296)
T cd06655 98 LAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRS 173 (296)
T ss_pred cCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccchhcccccccCC
Confidence 999999999853 4589999999999999999999998 9999999999999999999999999998754332 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...++..|+|||.+.+..++.++|||||||++|+|++|+.||............... .......+...+..+.+++.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~ 250 (296)
T cd06655 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSPIFRDFLN 250 (296)
T ss_pred CcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc---CCcccCCcccCCHHHHHHHH
Confidence 335678999999999888999999999999999999999887653221110000000 00011123345678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||..+|.+|||+.+++.+
T Consensus 251 ~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 251 RCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHhhcChhhCCCHHHHhhC
Confidence 9999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=319.83 Aligned_cols=251 Identities=18% Similarity=0.263 Sum_probs=198.3
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
...|.+++.||+|+||.||+|.. .++..||+|.++.... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 35688889999999999999994 4688999999875432 234467899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++ +|.+++... +..+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (309)
T cd07872 85 YLDK-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY 161 (309)
T ss_pred CCCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence 9975 888888653 34588999999999999999999998 9999999999999999999999999998754322
Q ss_pred CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-----------ccccc------cc
Q 011353 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------IQTLT------DS 271 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~~~~~------~~ 271 (488)
....+++.|+|||++.+ ..++.++|||||||++|+|+||+.||............ +..+. +.
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07872 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY 241 (309)
T ss_pred ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence 23456889999999875 45889999999999999999999888654221110000 00000 00
Q ss_pred cccC-------CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 CLEG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 ~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.... ......+.++.+++.+||+.||.+|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 242 NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000 0012346688999999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=312.95 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=201.3
Q ss_pred CcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
.++.+++.||.|+||.||+|... .+..||+|.+..... .....+.+|+.++..++||||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 35677888999999999999853 236899999875432 23456889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCC
Q 011353 130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfG 201 (488)
+||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccChheEEEcCCCCEEECCcc
Confidence 9999999999999996421 22478899999999999999999998 99999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccccccccc
Q 011353 202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 202 la~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
+++..... ....++..|+|||.+.+..++.++|||||||++||++| |..|+............. ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-----~~~~ 239 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-----DGGH 239 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-----cCCC
Confidence 98754332 12334678999999988889999999999999999998 887765433222211111 1111
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
...+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 240 LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1223345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=310.28 Aligned_cols=244 Identities=18% Similarity=0.221 Sum_probs=199.0
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc-----cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
+.+.+.||.|++|.||++. ..+++.||+|.+...... ....+.+|+.++++++||||+++++++.+.+..++|+
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 83 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM 83 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence 4455667999999999999 456899999998643211 2346888999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
||+++++|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++.....
T Consensus 84 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~ 160 (263)
T cd06625 84 EYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS 160 (263)
T ss_pred EECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence 99999999999864 34689999999999999999999998 9999999999999999999999999998754332
Q ss_pred ----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
....++..|+|||++.+..++.++||||||+++|+|++|+.||........... ..........+...+..+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 236 (263)
T cd06625 161 GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPQLPSHVSPDA 236 (263)
T ss_pred cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHH----HhccCCCCCCCccCCHHH
Confidence 223467789999999988899999999999999999999988754321111100 011111122344566789
Q ss_pred HHHHHHhccCCCCCCCChHHHHHH
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+++..||..+|.+|||+.+++++
T Consensus 237 ~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 237 RNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHHHhhcCcccCCCHHHHhhC
Confidence 999999999999999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-42 Score=316.96 Aligned_cols=294 Identities=18% Similarity=0.211 Sum_probs=225.6
Q ss_pred ccCHHHHHHHh-cCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCccc
Q 011353 43 EYSIETLRTAT-SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLAN 117 (488)
Q Consensus 43 ~~~~~~~~~~~-~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~ 117 (488)
++-+-+.+..| +.|..++++ |+|+||.||-++ ..+|+.+|.|++.+.... .....++|-.+|.+++.+.||.
T Consensus 173 QWK~lE~qpvt~n~F~~~Rvl---GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVs 249 (591)
T KOG0986|consen 173 QWKWLELQPVTKNTFRVYRVL---GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVS 249 (591)
T ss_pred HHHHHHhhhccccceeeeEEE---ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEE
Confidence 34445555444 458888877 999999999999 567999999998654322 2334788999999999999999
Q ss_pred EEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeee
Q 011353 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (488)
Q Consensus 118 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 197 (488)
+--.|++.+.+++|+..|.||+|.-+|.+.....+++..++.++.+|+.||++||+. +||+||+||+|||+|+.|+++|
T Consensus 250 laYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~-~iVYRDLKPeNILLDd~GhvRI 328 (591)
T KOG0986|consen 250 LAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR-RIVYRDLKPENILLDDHGHVRI 328 (591)
T ss_pred EeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc-ceeeccCChhheeeccCCCeEe
Confidence 999999999999999999999999999877767899999999999999999999999 9999999999999999999999
Q ss_pred ecCCCccccCCCCc---cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccccccccc
Q 011353 198 SCFGLMKNSRDGRS---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 198 ~DfGla~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
+|+|||..+..+.. ..||.+|||||++..+.|+...|.|||||+||||+.|+.||............-+.... ..
T Consensus 329 SDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~--~~ 406 (591)
T KOG0986|consen 329 SDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE--DP 406 (591)
T ss_pred eccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc--ch
Confidence 99999998776643 47899999999999999999999999999999999999999764322211111111111 11
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCCCCcccccCCCCCCCCCCCCCCccccc
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACL 344 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 344 (488)
..++...++++.+|....|++||++|...+.- --..+++++....-.+.....+--.+|..|.+.+..
T Consensus 407 ~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~--ga~evk~HpfFk~lnw~rleagml~PPfiPdp~aVy 474 (591)
T KOG0986|consen 407 EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGE--GAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGAVY 474 (591)
T ss_pred hhcccccCHHHHHHHHHHHccCHHHhccCCCc--CcchhhhCcccccCCHhHHhccCCCCCCCCCccccc
Confidence 23556678999999999999999999765421 112233333333323333333333455555555443
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=323.80 Aligned_cols=253 Identities=21% Similarity=0.288 Sum_probs=198.7
Q ss_pred cccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeC-Cee
Q 011353 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-DER 128 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~~~ 128 (488)
+|++++.||.|+||.||+|.. .+++.||||+++..... ....+.+|+.++..+ +||||+++++++... ...
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 678889999999999999973 34678999999764322 245688999999999 689999999988654 457
Q ss_pred EEEEecCCCCCHHhhhccCC------------------------------------------------------------
Q 011353 129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 148 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~------------------------------------------------------------ 148 (488)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999986421
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC------ccccCCC
Q 011353 149 -----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLA 217 (488)
Q Consensus 149 -----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~------~~~~~~~ 217 (488)
...+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++....... ...++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 246 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence 12368888999999999999999998 99999999999999999999999999987643221 1234567
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCC
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 296 (488)
|+|||++.+..++.++||||||+++|+|++ |..|++........... .........+...++.+.+++..||+.+
T Consensus 247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~cl~~~ 322 (343)
T cd05103 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEGTRMRAPDYTTPEMYQTMLDCWHGE 322 (343)
T ss_pred eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH----HhccCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999998889999999999999999997 77776543211100000 0000111112224567999999999999
Q ss_pred CCCCCChHHHHHHHHhhhc
Q 011353 297 PRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 297 p~~Rps~~~il~~L~~~~~ 315 (488)
|++|||+.+|+++|+.+.+
T Consensus 323 p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 323 PSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=310.67 Aligned_cols=245 Identities=14% Similarity=0.200 Sum_probs=196.0
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeC------CeeEE
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG------DERLL 130 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~------~~~~l 130 (488)
|++++.||.|+||.||+|. ..+++.||+|++.... .....+.+|+.++..+ +|+||+++++++... ...++
T Consensus 8 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 86 (272)
T cd06637 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 86 (272)
T ss_pred hhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence 4556777999999999999 4568899999987543 3456788999999999 799999999998753 45799
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++......
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~ 165 (272)
T cd06637 87 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 165 (272)
T ss_pred EEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHEEECCCCCEEEccCCCceeccccc
Confidence 99999999999999765455689999999999999999999998 9999999999999999999999999998754322
Q ss_pred ---CccccCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 210 ---RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
....+++.|+|||++. +..++.++|||||||++|||++|+.||............ .............
T Consensus 166 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~ 241 (272)
T cd06637 166 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----PRNPAPRLKSKKW 241 (272)
T ss_pred ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH----hcCCCCCCCCCCc
Confidence 2345788999999986 345888999999999999999999887532211111000 0011111112234
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+..+.+|+.+||..+|.+|||+.+++.+
T Consensus 242 ~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 242 SKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 5689999999999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=329.40 Aligned_cols=247 Identities=18% Similarity=0.215 Sum_probs=194.7
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCC-----eeEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLL 130 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~l 130 (488)
+++++.||+|+||.||++.. .+++.||||++.... ....+++.+|+.+++.++||||+++++++...+ ..++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 45677889999999999994 578999999986532 223457889999999999999999999998776 7899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||+. ++|.+.+.. ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 82 VTELMQ-SDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred Eeeccc-cCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 999996 478888754 45699999999999999999999998 9999999999999999999999999998764322
Q ss_pred ----CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc--------c-----------
Q 011353 210 ----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------I----------- 265 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--------~----------- 265 (488)
....+++.|+|||++.+. .++.++|||||||++|||++|+.||............ .
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 223567899999999874 4789999999999999999999888643211100000 0
Q ss_pred ccccccccc-------CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 QTLTDSCLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 ~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+...... .......+.++.+|+.+||+.||.+|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000000 01112345789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=310.61 Aligned_cols=250 Identities=22% Similarity=0.295 Sum_probs=201.1
Q ss_pred CcccccccCCCCCCCeEEEEEeC-CC---CEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.++++.+.||+|+||.||+|... ++ ..||||.++.... .....|..|+.+++.++||||+++++++.+....++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 45677888999999999999953 33 3699999975432 2355799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 211 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 211 (488)
|||+++++|.+++... .+.+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~-g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 84 TEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 9999999999999653 34589999999999999999999998 999999999999999999999999999875433211
Q ss_pred -------cc--cCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 212 -------YS--TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 212 -------~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
.. .+..|+|||.+.+..++.++|||||||++||+++ |..||............... .....+...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~ 236 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-----YRLPPPMDC 236 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CcCCCcccC
Confidence 11 1347999999998889999999999999999887 88777543222111111110 011122345
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
+..+.+++..||..+|.+||++.+++..|+.+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 67899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=314.44 Aligned_cols=256 Identities=20% Similarity=0.275 Sum_probs=206.0
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
..+|++++.||+|+||+||++. ..++..||+|++..... .....+.+|+++++.++||||+++++++...+..++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 3567888999999999999999 45688999999865432 235678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--Cc
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 211 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~ 211 (488)
|+++++|.+++.. .+.+++..+..++.+++.||.|||+..+++|+||||+||++++++.++|+|||++...... ..
T Consensus 84 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 84 FMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred cCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 9999999999864 3468999999999999999999997448999999999999999999999999998654322 23
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh-------hccccccccccccCCCC-hHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-------DRNIQTLTDSCLEGQFS-SDEGT 283 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~ 283 (488)
..++..|+|||++.+..++.++|||||||++|+|+||+.||......... ............ ..++ ...+.
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 240 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP-PRLPSSDFPE 240 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC-CCCCchhcCH
Confidence 46789999999998888999999999999999999999888643221000 000111111111 1111 12567
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
.+.+++.+||+.||++|||+.+++++..-++
T Consensus 241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 241 DLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 8999999999999999999999999854443
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=316.39 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=203.3
Q ss_pred cccccccCCCCCCCeEEEEEeC--------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCe
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 127 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 127 (488)
++.+.+.||+|+||.||++... ....||+|.++.... .....+.+|+.+++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGP 92 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCc
Confidence 4567788899999999999731 245799999875432 2345688999999999 69999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (488)
.++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+. |++|+||||+|||++.++
T Consensus 93 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~~~ 171 (314)
T cd05099 93 LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDN 171 (314)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeeccccceeEEEcCCC
Confidence 999999999999999996532 23588999999999999999999998 999999999999999999
Q ss_pred CeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccc
Q 011353 194 NPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ 266 (488)
Q Consensus 194 ~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 266 (488)
.+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|+|++ |..||..............
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 251 (314)
T cd05099 172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLRE 251 (314)
T ss_pred cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 99999999998654321 1123457999999998889999999999999999999 7777654322211111111
Q ss_pred ccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
......+...+..+.+++.+||..+|++|||+.++++.|..+....
T Consensus 252 -----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 252 -----GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred -----CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 0111223345678999999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-40 Score=307.19 Aligned_cols=247 Identities=20% Similarity=0.308 Sum_probs=201.9
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
.+++.+.||+|+||.||++...++..+|+|.+.... .....+.+|+.+++.++|+||+++++++.+ ...+++|||+++
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAK 84 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCC
Confidence 567788899999999999997777789999987543 234678999999999999999999999887 778999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc-----c
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-----Y 212 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~-----~ 212 (488)
++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++........ .
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 163 (260)
T cd05073 85 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 163 (260)
T ss_pred CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCC
Confidence 9999999765555688999999999999999999998 999999999999999999999999999876543221 2
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
.++..|+|||++.+..++.++|+|||||++|+++| |..||................ ....+...+..+.+++.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~ 238 (260)
T cd05073 164 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-----RMPRPENCPEELYNIMMR 238 (260)
T ss_pred cccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-----CCCCcccCCHHHHHHHHH
Confidence 23467999999998889999999999999999999 787776532221111111110 111223355789999999
Q ss_pred hccCCCCCCCChHHHHHHHHh
Q 011353 292 CLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~ 312 (488)
||+.+|++||++.+++..|+.
T Consensus 239 ~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 239 CWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=313.99 Aligned_cols=249 Identities=16% Similarity=0.223 Sum_probs=202.9
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
...|++++.||.|+||.||++.. .++..||+|.+..........+.+|+.++++++||||+++++++......++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 45688899999999999999995 56889999999765545566799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++++|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 84 CDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred cCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 9999999998653 34699999999999999999999998 9999999999999999999999999987654332 2
Q ss_pred ccccCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 211 SYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
...+++.|++||++. +..++.++||||||+++|+|++|+.||............ .....+ .-..+...+.++
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~ 238 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKI-LKSEPP--TLDQPSKWSSSF 238 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHH-hcCCCC--CcCCcccCCHHH
Confidence 345788999999985 344778999999999999999999887543211111000 000000 011223456789
Q ss_pred HHHHHHhccCCCCCCCChHHHHHH
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+++..||+.+|.+|||+.+++++
T Consensus 239 ~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 239 NDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHHhccChhhCcCHHHHhcC
Confidence 999999999999999999999887
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=308.04 Aligned_cols=245 Identities=16% Similarity=0.185 Sum_probs=201.4
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEee-CCeeEEEEec
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEY 134 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~E~ 134 (488)
|++++.||.|++|.||++. ..+++.||+|.+..... ...+.+.+|+.+++.++|+|++++++.+.. ....++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 6778889999999999999 45678999999865432 234568899999999999999999998764 4468999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK-HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 9999999999765556689999999999999999999998 9999999999999999999999999998765432 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+++.|+|||++.+..++.++||||||+++++|++|+.||................. ...+...+..+.+++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~ 235 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL-----PPMPKDYSPELGELIA 235 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC-----CCCccccCHHHHHHHH
Confidence 34567899999999988899999999999999999999988765432222111111111 1223446678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||+.+|++|||+.+++++
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 236 TMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHhccCcccCCCHHHHhcC
Confidence 9999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=313.94 Aligned_cols=255 Identities=22% Similarity=0.328 Sum_probs=203.7
Q ss_pred CcccccccCCCCCCCeEEEEEeC-----CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEee--CCee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCE--GDER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 128 (488)
..+.+++.||+|+||.||++.+. ++..||||.++..... ....|.+|+.+++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45677888999999999999853 3678999999865543 35679999999999999999999999877 5578
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++||||+++++|.+++.... ..+++..+..++.|++.||.|||++ |++|+||||+||+++.++.++|+|||++.....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 99999999999999996532 3589999999999999999999998 999999999999999999999999999887653
Q ss_pred CC-------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh----------hccccccccc
Q 011353 209 GR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNIQTLTDS 271 (488)
Q Consensus 209 ~~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----------~~~~~~~~~~ 271 (488)
.. ....+..|++||.+.+..++.++||||||++++||+||..|+......... ..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 21 122345699999998888999999999999999999999876543211100 0000111111
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
......+..++..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 242 GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111112234557899999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=306.49 Aligned_cols=248 Identities=15% Similarity=0.166 Sum_probs=203.0
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
+|++.+.+|.|+||.||+|.. .++..+++|.+..........+.+|+.+++.++||||+++++++.+....+++|||++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 466778889999999999994 5678999999986655556789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~ 212 (488)
+++|.+++... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...... ...
T Consensus 84 ~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 84 GGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET-GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred CCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence 99999998653 24689999999999999999999998 9999999999999999999999999998765432 234
Q ss_pred ccCCCCCCccccccC---CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh-ccccccccccccCCCChHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-RNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
.++..|+|||.+.+. .++.++|||||||++|+|+||+.|+.......... .......... ...+...+.++.++
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 239 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK--LKDKEKWSPVFHDF 239 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc--ccchhhhhHHHHHH
Confidence 567889999999876 78999999999999999999998876432111110 0001001111 11233456789999
Q ss_pred HHHhccCCCCCCCChHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~ 309 (488)
+.+||..+|.+|||+.+++.+
T Consensus 240 i~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 240 IKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHHcCCChhhCCCHHHHhcC
Confidence 999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=308.77 Aligned_cols=248 Identities=21% Similarity=0.281 Sum_probs=199.2
Q ss_pred ccccccCCCCCCCeEEEEEeC-CC---CEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 59 ENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
++..+.||+|+||.||+|... ++ ..+|+|.++.... .....+.+|+.+++.++||||+++.+++.+.+..++|||
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (268)
T cd05063 7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITE 86 (268)
T ss_pred ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEE
Confidence 344566799999999999953 33 3799999875532 234568999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc--
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-- 211 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~-- 211 (488)
|+++++|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++........
T Consensus 87 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 164 (268)
T cd05063 87 YMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDM-NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGT 164 (268)
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEEcCCCcEEECCCccceecccccccc
Confidence 99999999999653 34689999999999999999999998 999999999999999999999999999875543211
Q ss_pred -----cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 212 -----YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 212 -----~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
...+..|+|||++.+..++.++|||||||++|||++ |..||............... .....+...+..+
T Consensus 165 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~ 239 (268)
T cd05063 165 YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-----FRLPAPMDCPSAV 239 (268)
T ss_pred eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-----CCCCCCCCCCHHH
Confidence 112356999999998889999999999999999998 88887543222111111111 1111223356789
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+++.+||+.+|++||++.++++.|+.+
T Consensus 240 ~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 240 YQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 9999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=305.87 Aligned_cols=247 Identities=21% Similarity=0.325 Sum_probs=201.5
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.+++++.+.||.|+||.||++...++..+|+|.+..... ....+.+|+++++.++||||+++++++......++||||+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 346778888999999999999976678999999875432 3467999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----- 210 (488)
++++|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 82 EHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESS-NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred CCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 999999998653 34589999999999999999999998 99999999999999999999999999987543321
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
....+..|+|||++.+..++.++||||||+++|||++ |..||............... .....+...+..+.+|+
T Consensus 160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~ 234 (256)
T cd05112 160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-----FRLYKPRLASQSVYELM 234 (256)
T ss_pred CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-----CCCCCCCCCCHHHHHHH
Confidence 1223568999999998889999999999999999998 88776543322211111110 01011222457899999
Q ss_pred HHhccCCCCCCCChHHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L 310 (488)
.+||+.+|++|||+.++++.|
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 235 QHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHcccChhhCCCHHHHHHhh
Confidence 999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=304.35 Aligned_cols=241 Identities=27% Similarity=0.404 Sum_probs=197.6
Q ss_pred cCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHh
Q 011353 64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~ 142 (488)
.||.|+||.||++...+++.||+|++...... ....+.+|+.++++++|+||+++++++.+....++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 57999999999999766899999998765443 45679999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc------cccCC
Q 011353 143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------YSTNL 216 (488)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~------~~~~~ 216 (488)
++... ...+++..+..++.+++.||.|||++ +++||||||+||+++.++.++|+|||++........ ...+.
T Consensus 82 ~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T cd05041 82 FLRKK-KNRLTVKKLLQMSLDAAAGMEYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPI 159 (251)
T ss_pred HHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCccee
Confidence 99653 34588999999999999999999998 999999999999999999999999999876542211 12245
Q ss_pred CCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccC
Q 011353 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (488)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (488)
.|+|||.+.++.++.++|||||||++|+|+| |..||.............. ......+...+..+.+++.+||..
T Consensus 160 ~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~ 234 (251)
T cd05041 160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-----GYRMPAPQLCPEEIYRLMLQCWAY 234 (251)
T ss_pred ccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-----CCCCCCCccCCHHHHHHHHHHhcc
Confidence 6999999998889999999999999999999 6666654322211111110 011112334567899999999999
Q ss_pred CCCCCCChHHHHHHHH
Q 011353 296 EPRERPNPRSLVTALV 311 (488)
Q Consensus 296 ~p~~Rps~~~il~~L~ 311 (488)
+|.+|||+.++++.|+
T Consensus 235 ~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 235 DPENRPSFSEIYNELQ 250 (251)
T ss_pred ChhhCcCHHHHHHHhh
Confidence 9999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=306.35 Aligned_cols=246 Identities=25% Similarity=0.373 Sum_probs=200.5
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
+.+|++.+.||+|+||.||++.. +++.||+|.++... ....+.+|+.+++.++||||+++++++... ..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 35677888899999999999975 56789999987543 345789999999999999999999998664 479999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-Ccccc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYST 214 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~~~ 214 (488)
++++|.+++.......+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++...... .....
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL 159 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence 999999999765455689999999999999999999998 9999999999999999999999999998765433 22233
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 293 (488)
+..|+|||.+.+..++.++|||||||++|+|++ |+.||............... .....+...+..+.+++.+||
T Consensus 160 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l 234 (254)
T cd05083 160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-----YRMEPPEGCPADVYVLMTSCW 234 (254)
T ss_pred CceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-----CCCCCCCcCCHHHHHHHHHHc
Confidence 567999999988889999999999999999998 88777554332221111111 111122345678999999999
Q ss_pred cCCCCCCCChHHHHHHHH
Q 011353 294 QYEPRERPNPRSLVTALV 311 (488)
Q Consensus 294 ~~~p~~Rps~~~il~~L~ 311 (488)
+.+|.+||++.+++..|+
T Consensus 235 ~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 235 ETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCChhhCcCHHHHHHHHc
Confidence 999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-40 Score=313.39 Aligned_cols=253 Identities=19% Similarity=0.285 Sum_probs=197.2
Q ss_pred cccccccCCCCCCCeEEEEEeC-----------------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE-----------------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLL 119 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~ 119 (488)
+|.+.+.||+|+||.||++... ++..||+|.++..... ....+.+|+.+++.++|+||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4677888999999999998532 2446999999765322 345789999999999999999999
Q ss_pred EEEeeCCeeEEEEecCCCCCHHhhhccCCC---------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC
Q 011353 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWET---------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190 (488)
Q Consensus 120 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~ 190 (488)
+++.+.+..++||||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+|||++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dlkp~Nili~ 164 (296)
T cd05095 86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL-NFVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CeecccCChheEEEc
Confidence 999999999999999999999999865321 2477889999999999999999998 999999999999999
Q ss_pred CCCCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh--CCCCCCchhhHHHhh
Q 011353 191 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIRD 262 (488)
Q Consensus 191 ~~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~~~~~~ 262 (488)
.++.++|+|||+++...... ...+++.|++||...++.++.++|||||||++|||+| |..||..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 99999999999987653321 1223568999999888889999999999999999998 555554322211111
Q ss_pred ccccccc--cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 263 RNIQTLT--DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 263 ~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
....... ........+..++..+.+++.+||+.||.+|||+.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 245 NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0000000 000000112335578999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-40 Score=342.74 Aligned_cols=248 Identities=18% Similarity=0.233 Sum_probs=196.2
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEee--CCeeEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL 130 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 130 (488)
+.+|.+++.||.|+||+||++. ..++..||+|.+..... .....|..|+.++..|+|||||+++++|.+ ...++|
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 4678899999999999999999 45678999999875432 234568999999999999999999998854 356899
Q ss_pred EEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcC------CCcccccccCcceeeCC-----------
Q 011353 131 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK------ERALYHDLNAYRIVFDD----------- 191 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~------~~iiH~Dlkp~Nill~~----------- 191 (488)
||||+++|+|.++|... ....+++..++.|+.||+.||.|||+. .+||||||||+||||+.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 99999999999999642 234699999999999999999999984 15999999999999964
Q ss_pred ------CCCeeeecCCCccccCCC---CccccCCCCCCcccccc--CCCCCCccchhhHHHHHHHHhCCCCCCchhh-HH
Q 011353 192 ------DVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DL 259 (488)
Q Consensus 192 ------~~~~kl~DfGla~~~~~~---~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~ 259 (488)
.+.+||+|||++...... ....+|+.|+|||++.+ ..++.++||||||||||+|+||..||..... ..
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~q 251 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQ 251 (1021)
T ss_pred ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHH
Confidence 235899999998865433 23467999999999864 4488999999999999999999998864321 11
Q ss_pred HhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+.. .+..... ......+.++.+||..||+.+|.+|||+.+++.+
T Consensus 252 li~-~lk~~p~-----lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 252 LIS-ELKRGPD-----LPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHH-HHhcCCC-----CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 110 0000000 0112245789999999999999999999999965
|
|
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=312.06 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=199.8
Q ss_pred CcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
.+|++++.||+|+||.||+|... .+..||+|.++.... .....+.+|+.+++.++||||+++++++.+.+..+
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL 85 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 35778889999999999999742 245899999875432 22345889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCC
Q 011353 130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfG 201 (488)
+||||+++|+|.+++.... ...+++..+..++.|++.||.|||++ +++||||||+||++++++.++|+|||
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dikp~nili~~~~~~~L~Dfg 164 (288)
T cd05061 86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFG 164 (288)
T ss_pred EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCCChheEEEcCCCcEEECcCC
Confidence 9999999999999996421 13356778899999999999999998 99999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccccccccc
Q 011353 202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 202 la~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
+++..... ....++..|+|||.+.+..++.++|||||||++|||++ |..|+............... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~ 239 (288)
T cd05061 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-----GY 239 (288)
T ss_pred ccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CC
Confidence 98754322 11233567999999998889999999999999999999 56666543222211111100 01
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
...+...+..+.+++.+||+.+|++|||+.++++.|+...
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 240 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1122334578999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=328.72 Aligned_cols=243 Identities=18% Similarity=0.207 Sum_probs=191.6
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.|.+.+.||.|+||.||++.. ..++.||||.... ..+.+|+++|++|+|+|||++++++...+..++|||++.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 467788899999999999995 4578999996432 236789999999999999999999999999999999995
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC------C
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------R 210 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~------~ 210 (488)
++|.+++... ...+++..++.|+.||+.||.|||++ |||||||||+|||++.++.+||+|||+++..... .
T Consensus 244 -~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 244 -SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGE-GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred -CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 6899888643 34699999999999999999999998 9999999999999999999999999998764332 1
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCch------------hhHHHhhccc--cccccc-----
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH------------ALDLIRDRNI--QTLTDS----- 271 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~------------~~~~~~~~~~--~~~~~~----- 271 (488)
...||+.|+|||++.+..++.++|||||||+||||++|..++... ....+..... ..+...
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 235799999999999989999999999999999999987654321 1111111110 000000
Q ss_pred ----------cccCC-----CC--hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 ----------CLEGQ-----FS--SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 ----------~~~~~-----~~--~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... +. ...+..+.+|+.+||+.||.+|||+.|++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000 00 0123578999999999999999999999987
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-40 Score=307.46 Aligned_cols=245 Identities=24% Similarity=0.317 Sum_probs=191.5
Q ss_pred cCCCCCCCeEEEEEeC----CCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEe-eCCeeEEEEecCCC
Q 011353 64 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERLLVAEYMPN 137 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~E~~~~ 137 (488)
.||+|+||.||+|... +...||+|.+.... ......+.+|+.+++.++||||+++++++. .++..++||||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 4699999999999842 24579999986432 233567889999999999999999999875 45568999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--------
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------- 209 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-------- 209 (488)
|+|.+++... ...+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 9999999653 23467888899999999999999998 9999999999999999999999999998754321
Q ss_pred CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCC-chhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
....++..|+|||.+.+..++.++|||||||++|||++|+.|+. .............. .....+...+..+.++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 234 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG-----RRLLQPEYCPDPLYEV 234 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHHHHH
Confidence 12234568999999988889999999999999999999665443 22111111111000 0111122345689999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 289 ASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
+.+||..+|++||++.++++.|+.+..
T Consensus 235 i~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 235 MLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred HHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=307.74 Aligned_cols=237 Identities=24% Similarity=0.378 Sum_probs=190.0
Q ss_pred cCCCCCCCeEEEEEeCC-C----------CEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 64 EHGEKAPNVVYKGKLEN-Q----------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.||+|+||.||+|...+ + ..|++|.+...... ...+.+|+.+++.++||||+++++++.. ...++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 57999999999999543 3 35888887655432 5779999999999999999999999988 7789999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-------CeeeecCCCccc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-------NPRLSCFGLMKN 205 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-------~~kl~DfGla~~ 205 (488)
||+++|+|.+++.... ..+++..+..++.||+.||.|||+. +++||||||+|||++.++ .+||+|||++..
T Consensus 80 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 80 EYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDK-KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC-CeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 9999999999997532 2689999999999999999999998 999999999999999887 799999999987
Q ss_pred cCCCCccccCCCCCCccccccC--CCCCCccchhhHHHHHHHHhC-CCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 206 SRDGRSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSG-KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 206 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
........++..|+|||++.+. .++.++|||||||++|+|++| ..|+.......... ... . ....+....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~---~---~~~~~~~~~ 230 (259)
T cd05037 158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQ---D---QHRLPMPDC 230 (259)
T ss_pred cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHh---c---CCCCCCCCc
Confidence 6655555667889999999876 689999999999999999996 44443221111000 000 0 001111123
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
..+.+++.+||..+|.+|||+.++++.|+
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 68999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=313.01 Aligned_cols=250 Identities=17% Similarity=0.252 Sum_probs=201.7
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
++++++.||+|+||.||++.. .++..||+|.+.... ......+.+|+.++++++||||+++++.+...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 577889999999999999995 478999999987542 223457899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--Ccc
Q 011353 136 PNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY 212 (488)
Q Consensus 136 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~~ 212 (488)
++++|.+++.... ...+++..+..++.|++.||.|||+..+++|+||||+||+++.++.++|+|||++...... ...
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN 161 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccC
Confidence 9999999886421 2368999999999999999999996448999999999999999999999999998765332 334
Q ss_pred ccCCCCCCccccccCC------CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
.+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||........... ...... ......+...+.++.
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~ 239 (286)
T cd06622 162 IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ-LSAIVD-GDPPTLPSGYSDDAQ 239 (286)
T ss_pred CCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH-HHHHhh-cCCCCCCcccCHHHH
Confidence 5678999999986543 58899999999999999999998865322211110 011111 111233445678899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++.+||+.+|++||++.+++++
T Consensus 240 ~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 240 DFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHHHHHcccCcccCCCHHHHhcC
Confidence 99999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=309.13 Aligned_cols=243 Identities=15% Similarity=0.230 Sum_probs=201.6
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
+|++++.||.|++|.||+|.. .++..||+|.+.... ......+.+|+.+++.++|+||+++++++.+....++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 467778889999999999994 568899999987543 334556889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
++++|.+++.. .++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++..... ..
T Consensus 82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 99999999964 3789999999999999999999998 9999999999999999999999999998765543 23
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChH-HHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD-EGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 290 (488)
..++..|+|||++.+..++.++|||||||++|+|+||..||............... .....+.. .+..+.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-----NPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-----CCCCCcccccCHHHHHHHH
Confidence 45678899999999888999999999999999999999887543211111111111 11111122 5678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||..+|++|||+++++++
T Consensus 233 ~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 233 LCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHhhCChhhCcCHHHHhhC
Confidence 9999999999999999886
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=306.38 Aligned_cols=243 Identities=23% Similarity=0.339 Sum_probs=195.3
Q ss_pred ccCCCCCCCeEEEEEe-CC---CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 63 SEHGEKAPNVVYKGKL-EN---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
++||+|+||.||+|.. .. +..||+|.+...... ..+.+.+|+.+++.++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 3579999999999974 22 268999999865432 3557899999999999999999999875 4568999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcc-----
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY----- 212 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~----- 212 (488)
|+|.+++... ..+++..+..++.|++.||.|||+. +++|+||||+|||++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhc-CeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 9999999753 3689999999999999999999998 9999999999999999999999999998765433211
Q ss_pred --ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 213 --STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 213 --~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
.++..|+|||.+.+..++.++|||||||++|+|++ |..||............ ........+...+..+.+++
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML-----ESGERLPRPEECPQEIYSIM 231 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-----HcCCcCCCCCCCCHHHHHHH
Confidence 12357999999998889999999999999999998 88776543221111110 00011122334567899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhhh
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
.+||..+|.+|||+.++++.|+.+.
T Consensus 232 ~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 232 LSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHhcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=307.10 Aligned_cols=250 Identities=22% Similarity=0.296 Sum_probs=201.3
Q ss_pred CcccccccCCCCCCCeEEEEEeC-C---CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.++++.+.||+|+||.||+|... + +..+|+|.++..... ..+.+.+|+.++..++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 35677788899999999999842 2 347999998754322 345789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 211 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 211 (488)
|||+++++|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+|||++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 84 TEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 9999999999999653 34689999999999999999999998 999999999999999999999999999886543321
Q ss_pred -------cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 212 -------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 212 -------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
...+..|++||++.+..++.++||||||+++|++++ |..||................ ....+...+.
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 236 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-----RLPAPMDCPA 236 (267)
T ss_pred eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-----cCCCCCCCCH
Confidence 112457999999998889999999999999999887 888775432211111111110 1111233567
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 237 ALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 899999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=307.27 Aligned_cols=245 Identities=22% Similarity=0.311 Sum_probs=194.9
Q ss_pred cCCCCCCCeEEEEEe-CCCC--EEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL-ENQF--RIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
.||+|+||.||+|.. .++. .+++|.++.... .....+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 469999999999995 3443 578998875432 2345788999999999 7999999999999999999999999999
Q ss_pred CHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 139 TLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 139 sL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
+|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999996422 12478999999999999999999998 99999999999999999999999999986
Q ss_pred ccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChH
Q 011353 205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (488)
Q Consensus 205 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
..... .....+..|+|||++.+..++.++|||||||++|||+| |..||.............. ......+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~ 235 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----GYRLEKPLN 235 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC-----CCCCCCCCc
Confidence 43221 11223567999999988889999999999999999997 8877754322211111100 011112233
Q ss_pred HHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 281 ~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
.+.++.+++.+||..+|.+|||+.++++.|+.+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 5568999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=311.87 Aligned_cols=250 Identities=22% Similarity=0.319 Sum_probs=200.2
Q ss_pred CcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
.++++++.||.|+||.||++... ++..||+|.+...... ....+.+|+.+++.++||||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 35678888999999999999853 4678999998754332 2456889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee
Q 011353 130 LVAEYMPNDTLAKHLFHWE--------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill 189 (488)
+||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +++||||||+||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~-~i~H~dl~p~nil~ 163 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER-KFVHRDLATRNCLV 163 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CeecccccHhheEe
Confidence 9999999999999996421 12478889999999999999999998 99999999999999
Q ss_pred CCCCCeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhh
Q 011353 190 DDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD 262 (488)
Q Consensus 190 ~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~ 262 (488)
+.++.++|+|||++...... .....++.|+|||++.+..++.++|||||||++|||++ |..||..........
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~ 243 (288)
T cd05050 164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIY 243 (288)
T ss_pred cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999998754322 12233567999999998889999999999999999998 766765432221111
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHh
Q 011353 263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 312 (488)
.... .. ....+...+..+.+++.+||+.+|.+|||+.++++.|+.
T Consensus 244 ~~~~----~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 244 YVRD----GN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHhc----CC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1000 00 001223356789999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=309.24 Aligned_cols=252 Identities=17% Similarity=0.251 Sum_probs=201.0
Q ss_pred HHHhcCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 50 RTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 50 ~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
+.+++++.....+ |+|+||.||+|. ..++..||+|.+........+.+.+|+.+++.++|+||+++++++...+..
T Consensus 4 ~~~~~~~~~~~~l---g~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 4 EYEYDENGERVVL---GKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred ccccccCCceEEE---ecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 3456666655544 999999999999 556889999998876655667799999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-CCCeeeecCCCccc
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPM--KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKN 205 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~DfGla~~ 205 (488)
++|+||+++++|.+++.... ..+ ++..+..++.||+.||.|||++ +++|+||||+||+++. ++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 99999999999999997532 335 7888999999999999999998 9999999999999976 67999999999875
Q ss_pred cCCC----CccccCCCCCCccccccCC--CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCCh
Q 011353 206 SRDG----RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (488)
Q Consensus 206 ~~~~----~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
.... ....+++.|+|||++.+.. ++.++||||||+++|+|++|+.|+............. ........++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~ 235 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV---GMFKIHPEIPE 235 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh---hhhccCCCCCc
Confidence 4322 2345688999999987644 7889999999999999999998875321110000000 00011122344
Q ss_pred HHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 280 DEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 280 ~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+.++.+++.+||+.+|.+|||+.+++.+
T Consensus 236 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 236 SLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 566789999999999999999999999876
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=315.92 Aligned_cols=254 Identities=20% Similarity=0.305 Sum_probs=204.0
Q ss_pred cccccccCCCCCCCeEEEEEeC--------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCe
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 127 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 127 (488)
.|++.+.||+|+||.||++... .+..||+|.++.... .....+.+|+.++.++ +||||+++++++.+.+.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 4678889999999999999732 123689999875432 2356789999999999 79999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (488)
.++||||+++|+|.+++.... ...+++..+..++.|++.||.|||++ |++||||||+|||++.++
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nill~~~~ 171 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDN 171 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCCC
Confidence 999999999999999996422 23478899999999999999999998 999999999999999999
Q ss_pred CeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccc
Q 011353 194 NPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ 266 (488)
Q Consensus 194 ~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 266 (488)
.+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..||..............
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 251 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE 251 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 99999999987654322 1223467999999998889999999999999999999 7777665432222211111
Q ss_pred ccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
. .....+...+..+.+++.+||+.+|.+|||+.++++.|+.+....
T Consensus 252 ~-----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 252 G-----HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred C-----CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 1 111223345678999999999999999999999999999887544
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=320.76 Aligned_cols=249 Identities=16% Similarity=0.143 Sum_probs=196.4
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|++++.||+|+||+||++.. .+++.||+|++.... ......+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 577888999999999999994 568899999986421 1223457889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|++||+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 82 y~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~-~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 82 YYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQL-HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred CCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 99999999999653 34689999999999999999999998 9999999999999999999999999998765432
Q ss_pred -CccccCCCCCCcccccc-----CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....||+.|+|||++.+ +.++.++|||||||++|+|++|+.||................. ...........+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~~~ 238 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEE-RFQFPSHITDVSE 238 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCC-cccCCCccccCCH
Confidence 12458999999999875 4678899999999999999999999865432211111110000 0000111123467
Q ss_pred HHHHHHHHhccCCCCC--CCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRE--RPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~--Rps~~~il~~ 309 (488)
++.+++.+||...+.+ |+++.++++|
T Consensus 239 ~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 239 EAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 8999999999876554 4688888876
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=306.82 Aligned_cols=243 Identities=19% Similarity=0.278 Sum_probs=198.4
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc---------HHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---------ARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
+.+.+.||.|++|.||+|.. .++..||+|.+....... .+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 34556779999999999984 568899999887543221 24578899999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++||||+++++|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++....
T Consensus 82 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~-~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred EEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhc-CcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 999999999999999965 35689999999999999999999998 999999999999999999999999999876542
Q ss_pred C----------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC
Q 011353 209 G----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 209 ~----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
. ....++..|+|||.+.+..++.++|||||||++|+|++|+.||........... ... ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~----~~~~~~~ 233 (267)
T cd06628 159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK-IGE----NASPEIP 233 (267)
T ss_pred ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHH-Hhc----cCCCcCC
Confidence 1 123467889999999988899999999999999999999988865321111000 000 1112233
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+..+.+++.+||+.+|.+||++.+++++
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred cccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 4466789999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=313.43 Aligned_cols=252 Identities=19% Similarity=0.294 Sum_probs=199.2
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCC----EEEEEEcCCCCCcc-HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
+++.++.||+|+||.||+|.. .++. .||+|.+....... ...+.+|+.+++.++||||+++++++... ..+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v 86 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLV 86 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceee
Confidence 345667789999999999984 4443 57999887543322 34688999999999999999999998654 46799
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
+||+++|+|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||+++......
T Consensus 87 ~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 164 (303)
T cd05110 87 TQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 164 (303)
T ss_pred ehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhc-CeeccccccceeeecCCCceEEccccccccccCccc
Confidence 9999999999998653 33589999999999999999999998 99999999999999999999999999998654321
Q ss_pred -----ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 211 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 211 -----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
...++..|++||++.+..++.++|||||||++|||++ |+.||............ ........+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 239 (303)
T cd05110 165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL-----EKGERLPQPPICTID 239 (303)
T ss_pred ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HCCCCCCCCCCCCHH
Confidence 1223568999999998889999999999999999998 77777553222111110 000001112234567
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+.+++..||..+|++||++.++++.|+.+....
T Consensus 240 ~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 240 VYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 999999999999999999999999999886654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=306.35 Aligned_cols=245 Identities=18% Similarity=0.194 Sum_probs=203.4
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|++++.||.|+||.||++. ..+++.||+|.+.... ......+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 6678889999999999999 5578899999986432 223457899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----c
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----~ 211 (488)
++++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence 999999999754445689999999999999999999998 99999999999999999999999999987654432 2
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..+++.|+|||++.+...+.++|||||||++++|+||+.|+................ ....+...+..+.+++.+
T Consensus 161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~ 235 (256)
T cd08218 161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-----YPPVSSHYSYDLRNLVSQ 235 (256)
T ss_pred ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-----CCCCcccCCHHHHHHHHH
Confidence 346788999999998889999999999999999999998876443222111111111 111233456789999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||+.+|.+||++.+++++
T Consensus 236 ~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 236 LFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HhhCChhhCcCHHHHhhC
Confidence 999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=309.58 Aligned_cols=252 Identities=19% Similarity=0.239 Sum_probs=202.1
Q ss_pred cccccccCCCCCCCeEEEEEeCC-----CCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEee-CCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~l 130 (488)
.|.+.+.||+|+||.||+|.... +..|++|++..... .....+.+|+.+++.++|+||+++++++.. +...++
T Consensus 7 ~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 86 (280)
T cd05043 7 RVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFV 86 (280)
T ss_pred heEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEE
Confidence 45566778999999999999644 68899999875432 234568899999999999999999998766 467899
Q ss_pred EEecCCCCCHHhhhccCCC------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 131 VAEYMPNDTLAKHLFHWET------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
++||+++++|.+++..... ..+++..++.++.|++.||.|||+. +++|+||||+||++++++.+||+|||+++
T Consensus 87 ~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kl~d~g~~~ 165 (280)
T cd05043 87 LYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR-GVIHKDIAARNCVIDEELQVKITDNALSR 165 (280)
T ss_pred EEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCHhhEEEcCCCcEEECCCCCcc
Confidence 9999999999999865321 4589999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCC
Q 011353 205 NSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (488)
Q Consensus 205 ~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
...... ...++..|+|||++.+..++.++|||||||++||+++ |+.||.......+....... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~ 240 (280)
T cd05043 166 DLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-----YRLAQ 240 (280)
T ss_pred cccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-----CCCCC
Confidence 653321 2234667999999998889999999999999999999 88777543221111111000 11111
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
+...+..+.+++.+||..+|++|||+.++++.|+.+.+
T Consensus 241 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 241 PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 22346789999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=311.10 Aligned_cols=244 Identities=18% Similarity=0.271 Sum_probs=208.1
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc--HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
-|.+-+.||+|.|..|-+++ .=+|..||||++.+..... ...+.+|++.|+.++|||||++|.+......+|+|+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 34555678999999999998 4579999999998765443 44688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee-CCCCCeeeecCCCccccCCCC---
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF-DDDVNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill-~~~~~~kl~DfGla~~~~~~~--- 210 (488)
-++|+|.+||.+++. .+.+....+++.||+.|+.|+|+. .+|||||||+||++ ..-|.|||.|||++..+..+.
T Consensus 99 GD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqL-HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~ 176 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQL-HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT 176 (864)
T ss_pred cCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhh-hhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh
Confidence 999999999987654 499999999999999999999998 99999999999888 567899999999998777664
Q ss_pred ccccCCCCCCccccccCCCCC-CccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTP-ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~-~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
+.+|+..|.|||.+.|..|+. ++||||||||||.|++|+.||...... ..+..+.+. ....|...+.+..+||
T Consensus 177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS----ETLTmImDC--KYtvPshvS~eCrdLI 250 (864)
T KOG4717|consen 177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS----ETLTMIMDC--KYTVPSHVSKECRDLI 250 (864)
T ss_pred cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch----hhhhhhhcc--cccCchhhhHHHHHHH
Confidence 557889999999999988865 789999999999999999887643221 122233332 2356788999999999
Q ss_pred HHhccCCCCCCCChHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~ 309 (488)
..||..||.+|.|.++|..+
T Consensus 251 ~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 251 QSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred HHHHhcCchhhccHHHHhcc
Confidence 99999999999999998876
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=306.47 Aligned_cols=251 Identities=21% Similarity=0.287 Sum_probs=202.0
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
+|++++.+|.|+||+||+|. ..++..+++|++..... .....+.+|+.+++.++|+||+++++.+...+..++|||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 46777888999999999999 45688999999875432 24567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 136 PNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
++++|.+++..... ..+++..+..++.|++.||.|||+. |++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999975332 4689999999999999999999998 99999999999999999999999999987554332
Q ss_pred ----ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 211 ----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 211 ----~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
...++..|++||++... .++.++|+|||||++|+|++|+.||.............................+..+
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSF 240 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHH
Confidence 22467889999999877 6899999999999999999999887543221111111111111000001112456789
Q ss_pred HHHHHHhccCCCCCCCChHHHHHH
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+++.+||..||++|||+.+++.+
T Consensus 241 ~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 241 RKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred HHHHHHHcCCChhhCcCHHHHhhC
Confidence 999999999999999999999876
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=322.99 Aligned_cols=246 Identities=21% Similarity=0.290 Sum_probs=203.2
Q ss_pred ccccCCCCCCCeEEEEEeCC--C--CEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 61 IVSEHGEKAPNVVYKGKLEN--Q--FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
+.++||+|.||.|++|.|.. | ..||||+++..... ....|++|+.+|.+|+|+|+++|+|+..+ ....+|||++
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 44667999999999999643 3 46899999876544 46789999999999999999999999987 7789999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc-c--
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-Y-- 212 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~-~-- 212 (488)
+.|||.+.|++.....|.......++.||+.||.||.++ ++|||||...|+|+-....|||+||||.+-...... +
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 999999999875566788999999999999999999999 999999999999998889999999999987655432 2
Q ss_pred ----ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCC-CCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 213 ----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 213 ----~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
.....|.|||.+...+++.+||||+|||+||||+|+. .|+.+..-- .+...++..-+-.-+..+++++.+
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-----qIL~~iD~~erLpRPk~csedIY~ 346 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-----QILKNIDAGERLPRPKYCSEDIYQ 346 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-----HHHHhccccccCCCCCCChHHHHH
Confidence 1246799999999999999999999999999999954 566543211 122222222222335668999999
Q ss_pred HHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 288 LASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
++..||..+|++|||+..|.+.+-..
T Consensus 347 imk~cWah~paDRptFsair~~~~l~ 372 (1039)
T KOG0199|consen 347 IMKNCWAHNPADRPTFSAIREDLVLA 372 (1039)
T ss_pred HHHHhccCCccccccHHHHHHhHHHH
Confidence 99999999999999999998654433
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=313.89 Aligned_cols=247 Identities=18% Similarity=0.177 Sum_probs=201.0
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|++++.||.|+||.||+|.. .++..||+|.+...... ..+.+..|+.+++.++|+||+++++.+.+....++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 466777889999999999995 45899999999765432 34568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+.+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999765456799999999999999999999998 9999999999999999999999999987643221
Q ss_pred -----------------------------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHH
Q 011353 210 -----------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI 260 (488)
Q Consensus 210 -----------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 260 (488)
....++..|+|||++.+..++.++||||||+++|+|++|..||........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 112467789999999988899999999999999999999998865432211
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCC----hHHHHHH
Q 011353 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN----PRSLVTA 309 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~il~~ 309 (488)
... ..............+..+.+++.+||..+|++||| +.+++++
T Consensus 241 ~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 241 FSN----ILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred HHH----HhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 111 11111000111125678999999999999999999 7777775
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=308.16 Aligned_cols=244 Identities=16% Similarity=0.253 Sum_probs=202.7
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.|..++.||.|+||.||+|.. .++..||||.+.... ......+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 456778889999999999995 568899999987543 233556889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----c
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----~ 211 (488)
++++|.+++.. +++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... .
T Consensus 85 ~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~-~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06640 85 GGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence 99999999853 4689999999999999999999998 99999999999999999999999999987654322 2
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..++..|+|||++.+..++.++|+|||||++|||+||..|+.......... ..........+...+..+.+++.+
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-----LIPKNNPPTLTGEFSKPFKEFIDA 235 (277)
T ss_pred ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-----hhhcCCCCCCchhhhHHHHHHHHH
Confidence 346778999999998889999999999999999999998875432211111 111111223344577889999999
Q ss_pred hccCCCCCCCChHHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L 310 (488)
||+.+|++||++.+++++-
T Consensus 236 ~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06640 236 CLNKDPSFRPTAKELLKHK 254 (277)
T ss_pred HcccCcccCcCHHHHHhCh
Confidence 9999999999999999883
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=317.54 Aligned_cols=243 Identities=13% Similarity=0.165 Sum_probs=190.4
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.|++++.||.|+||.||+|.. .++..||+|+..... ...|+.+++.++||||+++++++.+....++|||++.
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 578888999999999999995 457889999854322 3569999999999999999999999999999999995
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---Cccc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYS 213 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~~~ 213 (488)
++|.+++.. ....+++..+..|+.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 141 -~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 141 -SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred -CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 589888865 345699999999999999999999998 9999999999999999999999999998754322 2346
Q ss_pred cCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh----hH-----------HHhh-cc-ccccc-------
Q 011353 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA----LD-----------LIRD-RN-IQTLT------- 269 (488)
Q Consensus 214 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~----~~-----------~~~~-~~-~~~~~------- 269 (488)
+|+.|+|||++.+..++.++|||||||++|||+++..++.... .. .+.. +. ...+.
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRL 297 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHH
Confidence 7899999999998899999999999999999999765543210 00 0000 00 00000
Q ss_pred -----cc--cccC---C----CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 -----DS--CLEG---Q----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 -----~~--~~~~---~----~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.. .... . .....+.++.++|.+||+.||.+|||+.++++|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 00 0000 0 001234567789999999999999999999987
|
|
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-40 Score=310.87 Aligned_cols=242 Identities=17% Similarity=0.270 Sum_probs=199.1
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
|..++.||.|+||.||+|.. .++..||+|.++.... .....+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 45667789999999999984 5678999999875432 234568899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----cc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----~~ 212 (488)
+++|.+++. .+.+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++....... ..
T Consensus 86 ~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~-~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06642 86 GGSALDLLK---PGPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcC-CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence 999999985 34689999999999999999999998 99999999999999999999999999987654332 23
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.++..|+|||++.+..++.++|||||||++|||+||+.|+.......... ..........+...+..+.+++.+|
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06642 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-----LIPKNSPPTLEGQYSKPFKEFVEAC 236 (277)
T ss_pred cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh-----hhhcCCCCCCCcccCHHHHHHHHHH
Confidence 46788999999998889999999999999999999998765322111110 0111111122334567899999999
Q ss_pred ccCCCCCCCChHHHHHH
Q 011353 293 LQYEPRERPNPRSLVTA 309 (488)
Q Consensus 293 l~~~p~~Rps~~~il~~ 309 (488)
|+.+|++|||+.+++++
T Consensus 237 l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 237 LNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCCcccCcCHHHHHHh
Confidence 99999999999999997
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=310.98 Aligned_cols=250 Identities=18% Similarity=0.217 Sum_probs=196.0
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+|++++.||.|++|.||+|.. .++..||||.++.... .....+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 366778899999999999995 5688999999875432 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 135 MPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
++ ++|.+++.... ...+++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY 158 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence 97 58988886533 25689999999999999999999998 9999999999999999999999999998754322
Q ss_pred CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc--------------------cccc
Q 011353 210 RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------------IQTL 268 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--------------------~~~~ 268 (488)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.||............ ....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT 238 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence 223457889999998754 4788999999999999999999887643211000000 0000
Q ss_pred cccccc---CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 TDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 ~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...... .......+.++.+++.+||..||.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000 00112246788999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=313.47 Aligned_cols=252 Identities=17% Similarity=0.259 Sum_probs=199.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.+..|.+++.||.|+||.||+|.. .++..||+|.++.... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 356788999999999999999984 4688999999875432 23446788999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
||++ ++|.+++... ...+++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 9997 4899988653 34589999999999999999999998 9999999999999999999999999998754322
Q ss_pred -CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh-----------ccccccccc-----
Q 011353 210 -RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RNIQTLTDS----- 271 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-----------~~~~~~~~~----- 271 (488)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.||.......... ..+..+...
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 223457899999998754 47889999999999999999998886543211100 000000000
Q ss_pred -ccc---C----CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 -CLE---G----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 -~~~---~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
... . ......+..+.+|+.+||+.||.+|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000 0 0112345678999999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=304.30 Aligned_cols=245 Identities=16% Similarity=0.198 Sum_probs=201.4
Q ss_pred cccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
+|++.+.+|.|+||.||+|... ++..+++|.+..... ...+.+|+++++.++||||+++++++.+....++++||++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 5667778899999999999954 478999999875432 6779999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----cc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----~~ 212 (488)
+++|.+++... ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 82 ~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (256)
T cd06612 82 AGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV 159 (256)
T ss_pred CCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence 99999998642 35689999999999999999999998 99999999999999999999999999988654432 23
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.++..|+|||++.+..++.++|||||||++|+|++|+.|+.............. ... .....+...+..+.+++.+|
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN-KPP--PTLSDPEKWSPEFNDFVKKC 236 (256)
T ss_pred cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc-CCC--CCCCchhhcCHHHHHHHHHH
Confidence 467899999999988899999999999999999999988764321111000000 000 01112334557899999999
Q ss_pred ccCCCCCCCChHHHHHH
Q 011353 293 LQYEPRERPNPRSLVTA 309 (488)
Q Consensus 293 l~~~p~~Rps~~~il~~ 309 (488)
|+.+|.+|||+.+++.+
T Consensus 237 l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 237 LVKDPEERPSAIQLLQH 253 (256)
T ss_pred HhcChhhCcCHHHHhcC
Confidence 99999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=318.38 Aligned_cols=249 Identities=17% Similarity=0.149 Sum_probs=196.0
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|++++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 567888899999999999995 457889999986421 1123457889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++|+|.+++.+. ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~-~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 82 YYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred ccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 99999999999653 34589999999999999999999998 9999999999999999999999999998754322
Q ss_pred -CccccCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 210 -RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....||+.|+|||++. ...++.++|||||||++|||++|+.||................. ...........+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~s~ 238 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-RFQFPAQVTDVSE 238 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc-cccCCCccccCCH
Confidence 2246799999999986 34588999999999999999999999875432221111111000 0000111223567
Q ss_pred HHHHHHHHhccCCCCC--CCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRE--RPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~--Rps~~~il~~ 309 (488)
++.+++.+|+..++.+ |+++.++++|
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 239 DAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 8999999998665444 6899999988
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=323.72 Aligned_cols=243 Identities=15% Similarity=0.190 Sum_probs=194.9
Q ss_pred cccccccCCCCCCCeEEEEEeC---CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.|++++.||.|+||.||++... .+..||||.+... ..+.+|+.+++.++||||+++++++......++|||+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 5888999999999999999742 3578999998643 2356899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----- 209 (488)
+. ++|.+++.. ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.++|+|||+++.....
T Consensus 168 ~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~-givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGR-GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 95 589888843 45699999999999999999999998 9999999999999999999999999998765432
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhH----HH---hhc---ccccccc--------
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD----LI---RDR---NIQTLTD-------- 270 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~----~~---~~~---~~~~~~~-------- 270 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .+ ... .......
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 1346899999999999889999999999999999999999988653211 00 000 0000000
Q ss_pred ------ccccCC--CC-----hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 ------SCLEGQ--FS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 ------~~~~~~--~~-----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...... .+ ...+.++.++|.+||..||++|||+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 00 1234678999999999999999999999998
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-40 Score=320.67 Aligned_cols=249 Identities=17% Similarity=0.233 Sum_probs=195.1
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeC------C
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------D 126 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 126 (488)
...|.+++.||.|+||+||+|. ..++..||||++..... .....+.+|+.+++.++||||+++++++... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 4568888999999999999999 46788999999875422 2345678999999999999999999987543 3
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
..++++|++ +++|.+++. .+.+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++..
T Consensus 94 ~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred cEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCChhhEEECCCCCEEEcCCccceec
Confidence 468999998 779998884 34699999999999999999999998 9999999999999999999999999999875
Q ss_pred CCC-CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh-------cccccccccc-----
Q 011353 207 RDG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-------RNIQTLTDSC----- 272 (488)
Q Consensus 207 ~~~-~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-------~~~~~~~~~~----- 272 (488)
... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... ..........
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07878 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHA 248 (343)
T ss_pred CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhH
Confidence 543 34567899999999976 468999999999999999999998886532110000 0000000000
Q ss_pred ---c--cCCCC--------hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 273 ---L--EGQFS--------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 273 ---~--~~~~~--------~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. ....+ ...++.+.+|+.+||..||.+|||+.++++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 249 RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 00000 1123568899999999999999999999987
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=303.85 Aligned_cols=245 Identities=18% Similarity=0.210 Sum_probs=202.0
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|++++.||.|+||.||++. ..++..+|||.+..... .....+.+|+.+++.++||||+++++.+...+..++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 6677888999999999999 45788999999875432 23556899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC-CCeeeecCCCccccCCCC---c
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDGR---S 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~DfGla~~~~~~~---~ 211 (488)
++++|.+++.......+++..+..++.|++.||.|||++ +++|+||+|+||+++.+ +.++|+|||++....... .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (256)
T cd08220 82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK-LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT 160 (256)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence 999999999765455689999999999999999999998 99999999999999855 458999999988655432 3
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..++..|+|||.+.+..++.++||||||+++|+|++|+.||................ ....+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~ 235 (256)
T cd08220 161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT-----FAPISDRYSPDLRQLILS 235 (256)
T ss_pred cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC-----CCCCCCCcCHHHHHHHHH
Confidence 456789999999998889999999999999999999998876543222211111110 112233456789999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||+.+|++|||+.+++++
T Consensus 236 ~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 236 MLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HccCChhhCCCHHHHhhC
Confidence 999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=305.12 Aligned_cols=242 Identities=18% Similarity=0.224 Sum_probs=185.5
Q ss_pred cCCCCCCCeEEEEEeCCC---CEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 64 EHGEKAPNVVYKGKLENQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
+||+|+||.||++...++ ..+++|.+..... ...+.+.+|+.+++.++||||+++++.+.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 579999999999974332 3566777665432 235679999999999999999999999999999999999999999
Q ss_pred HHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC------CCc
Q 011353 140 LAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------GRS 211 (488)
Q Consensus 140 L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~------~~~ 211 (488)
|.+++.... ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.++|+|||++..... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH-NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999997532 23467778889999999999999998 999999999999999999999999999764221 123
Q ss_pred cccCCCCCCcccccc-------CCCCCCccchhhHHHHHHHHhCCC-CCCchhhHHH----hhccccccccccccCCCCh
Q 011353 212 YSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLI----RDRNIQTLTDSCLEGQFSS 279 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~tg~~-p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 279 (488)
..++..|+|||++.. ..++.++|||||||++|||+++.. |+........ .......+.+ ...+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 236 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFK----PQLEL 236 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCC----CccCC
Confidence 356788999999853 235789999999999999998654 4432211111 1111111122 22223
Q ss_pred HHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 280 DEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 280 ~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
..+..+.+++..|| .+|++||++.+|++.|.
T Consensus 237 ~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 237 PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 35677899999999 67999999999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=305.86 Aligned_cols=251 Identities=19% Similarity=0.258 Sum_probs=203.2
Q ss_pred cccccccCCCCCCCeEEEEEeC-CCC----EEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE-NQF----RIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
++++++.||+|+||.||+|... ++. .||+|.+...... ....+.+|+.+++.++||||+++++++.. ...++|
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v 86 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLI 86 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEE
Confidence 5677788899999999999843 333 6899998765432 34568899999999999999999999987 788999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 211 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 211 (488)
|||+++|+|.+++... ...+++..+..++.||+.||.|||+. +++|+||||+||+++.++.+||+|||+++.......
T Consensus 87 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 87 TQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEK-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred EecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 9999999999999753 33589999999999999999999998 999999999999999999999999999886543321
Q ss_pred ------cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 212 ------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 212 ------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
..++..|+|||.+....++.++|+||||+++||++| |+.||.......+...... ......+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 239 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK-----GERLPQPPICTID 239 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC-----CCCCCCCCCCCHH
Confidence 112467999999988889999999999999999999 8888765433222211111 0111122335567
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
+.+++.+||..+|..|||+.++++.|..+.+.
T Consensus 240 ~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 240 VYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=321.14 Aligned_cols=236 Identities=17% Similarity=0.181 Sum_probs=187.6
Q ss_pred CCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhcc---CCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL---RNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
||+|+||+||+|. ..+++.||||++..... .....+..|..++..+ .||||+++++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 5999999999999 45689999999864321 1223455666676655 699999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cccc
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYS 213 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~ 213 (488)
|+|.+++.. .+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQK--EGRFSEDRAKFYIAELVLALEHLHKY-DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 999999864 45689999999999999999999998 9999999999999999999999999998753221 2346
Q ss_pred cCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC-hHHHHHHHHHHHH
Q 011353 214 TNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDEGTELVRLASR 291 (488)
Q Consensus 214 ~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~ 291 (488)
||+.|+|||++.+. .++.++|||||||++|+|+||..||................. .++ ...+.++.+++.+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~li~~ 231 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV------RFPKNVLSDEGRQFVKG 231 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC------CCCCccCCHHHHHHHHH
Confidence 88999999998765 489999999999999999999999876533322111111000 111 1245788999999
Q ss_pred hccCCCCCCC----ChHHHHHH
Q 011353 292 CLQYEPRERP----NPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rp----s~~~il~~ 309 (488)
||..||.+|| ++.++++|
T Consensus 232 ~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 232 LLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HcCCCHHHCCCCCCCHHHHhcC
Confidence 9999999998 45666554
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=313.76 Aligned_cols=243 Identities=15% Similarity=0.228 Sum_probs=184.1
Q ss_pred ccCCCCCCCeEEEEEeC---CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEee--CCeeEEEEecCCC
Q 011353 63 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPN 137 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E~~~~ 137 (488)
.+||+|+||+||+|... +++.||+|.+.... ....+.+|+.+++.++||||+++++++.. ....++||||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 46799999999999853 46789999987543 23457899999999999999999999854 4568999999965
Q ss_pred CCHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee----CCCCCeeeecCCCcccc
Q 011353 138 DTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 138 gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~DfGla~~~ 206 (488)
+|.+++... ....+++..+..++.||+.||.|||+. |++||||||+|||+ +.++.+||+|||+++..
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07868 85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence 788877531 123588999999999999999999998 99999999999999 46678999999999765
Q ss_pred CCC-------CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHH-------------Hhh---
Q 011353 207 RDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-------------IRD--- 262 (488)
Q Consensus 207 ~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-------------~~~--- 262 (488)
... ....+|+.|+|||++.+. .++.++||||+||++|+|++|+.||.....+. +..
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07868 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 242 (317)
T ss_pred CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcC
Confidence 432 234568899999999874 58999999999999999999998875321100 000
Q ss_pred -------ccccccc------cccccCC------------CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 263 -------RNIQTLT------DSCLEGQ------------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 263 -------~~~~~~~------~~~~~~~------------~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....... ....... .....+..+.+++.+||+.||.+|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 243 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred CCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 0000000 000123468899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=305.67 Aligned_cols=245 Identities=17% Similarity=0.233 Sum_probs=198.5
Q ss_pred ccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
|.+.+.||.|+||.||+|...+++.+|||.+...... ....+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 4566778999999999999878889999998743221 1345888999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~---- 208 (488)
||+++++|.+++.+ ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 82 EFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNN-CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 99999999999965 34689999999999999999999998 999999999999999999999999998875321
Q ss_pred ------CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 209 ------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 209 ------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
.....++..|+|||++.+..++.++|||||||++|+|++|..||........... ... ........+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 235 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY-IGA--HRGLMPRLPDSFS 235 (265)
T ss_pred ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH-hhh--ccCCCCCCCCCCC
Confidence 1233567899999999988899999999999999999999988754211100000 000 0001112334456
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+.+++.+||+.+|.+||++.+++.+
T Consensus 236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 236 AAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 789999999999999999999998864
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=312.60 Aligned_cols=245 Identities=26% Similarity=0.396 Sum_probs=198.7
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHH--HHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDAR--QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|++++.||+|+||+||++.. .+++.||+|++......... ...+|+.+++.++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 56788899999999999995 45678999999876533322 3456999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc----CCCCc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RDGRS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~----~~~~~ 211 (488)
++++|.+++.. ...+++..+..++.||+.||.+||+. +++|+||||+||+++.++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~-~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSK-GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHT-TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred ccccccccccc--cccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence 99999999962 45689999999999999999999998 9999999999999999999999999998752 12234
Q ss_pred cccCCCCCCccccc-cCCCCCCccchhhHHHHHHHHhCCCCCCchh----hHHHhhccccccccccccCCCChHHHHHHH
Q 011353 212 YSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSHA----LDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 212 ~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
..++..|+|||++. +...+.++||||+|+++|+|++|..|+.... ................ .........+.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~ 234 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS---QQSREKSEELR 234 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT---TSHTTSHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc---cccchhHHHHH
Confidence 56788999999998 7889999999999999999999998887541 1111111111111110 00011237899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++..||+.||++|||+.+++++
T Consensus 235 ~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 235 DLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHHSSSSGGGSTTHHHHHTS
T ss_pred HHHHHHccCChhHCcCHHHHhcC
Confidence 99999999999999999999875
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=304.52 Aligned_cols=251 Identities=22% Similarity=0.280 Sum_probs=201.1
Q ss_pred cccccccCCCCCCCeEEEEEeCC----CCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
++.+.+.||.|+||.||+|...+ ...||||...... ....+.+.+|+.+++.++||||+++++++.+ ...++||
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~ 85 (270)
T cd05056 7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVM 85 (270)
T ss_pred hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEE
Confidence 45667788999999999998532 3579999987554 2335579999999999999999999999875 5578999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC--
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 210 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-- 210 (488)
||+++|+|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++......
T Consensus 86 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 163 (270)
T cd05056 86 ELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY 163 (270)
T ss_pred EcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccChheEEEecCCCeEEccCceeeecccccce
Confidence 999999999999653 33589999999999999999999998 99999999999999999999999999987654332
Q ss_pred ---ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 211 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
...++..|+|||.+.+..++.++||||||+++||+++ |..||.............. ......+...+..+.
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 238 (270)
T cd05056 164 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTLY 238 (270)
T ss_pred ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-----CCcCCCCCCCCHHHH
Confidence 1223467999999988889999999999999999986 8888765432211111000 001112334567899
Q ss_pred HHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 287 RLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
+++.+||..+|.+|||+.+++..|+.+...
T Consensus 239 ~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 239 SLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=304.76 Aligned_cols=250 Identities=20% Similarity=0.299 Sum_probs=199.6
Q ss_pred CcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
+++.++..||.|+||.||+|... +...|++|.+...... ....+.+|+.++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 35667888899999999999843 2467999998765433 3457999999999999999999999999989999
Q ss_pred EEEecCCCCCHHhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWET-------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGl 202 (488)
+||||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++|||+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA-RFVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc-CcccCcCccceEEEeCCCcEEEccccc
Confidence 99999999999999975331 2589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCC-----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCC
Q 011353 203 MKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (488)
Q Consensus 203 a~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
+...... ....++..|++||.+.+...+.++||||||+++|+|++ |..||................. ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~----~~~ 239 (275)
T cd05046 164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL----ELP 239 (275)
T ss_pred ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCc----CCC
Confidence 8654322 22234667999999988888999999999999999999 5656543222111111110000 011
Q ss_pred CChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.+...+..+.+++.+||+.+|.+|||+.++++.|.
T Consensus 240 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 240 VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 22335678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=311.68 Aligned_cols=241 Identities=18% Similarity=0.248 Sum_probs=197.2
Q ss_pred cccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 62 VSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
...||.|+||.||++.. .++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 35579999999999994 56889999998765544556789999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----CccccCC
Q 011353 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL 216 (488)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~~~ 216 (488)
.+++.. +.+++..+..++.||+.||.|||+. +++||||||+||++++++.++|+|||++...... ....++.
T Consensus 107 ~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 182 (292)
T cd06658 107 TDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTP 182 (292)
T ss_pred HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCc
Confidence 998843 4589999999999999999999998 9999999999999999999999999998654322 2345788
Q ss_pred CCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCC
Q 011353 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (488)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 296 (488)
.|+|||.+.+..++.++|||||||++|||++|+.||........... .......... .....+..+.+++..||..+
T Consensus 183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~ 259 (292)
T cd06658 183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IRDNLPPRVK--DSHKVSSVLRGFLDLMLVRE 259 (292)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcCCCccc--cccccCHHHHHHHHHHccCC
Confidence 99999999888899999999999999999999988765322111110 0011111111 11234567999999999999
Q ss_pred CCCCCChHHHHHH
Q 011353 297 PRERPNPRSLVTA 309 (488)
Q Consensus 297 p~~Rps~~~il~~ 309 (488)
|.+|||+.+++++
T Consensus 260 P~~Rpt~~~il~~ 272 (292)
T cd06658 260 PSQRATAQELLQH 272 (292)
T ss_pred hhHCcCHHHHhhC
Confidence 9999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=331.06 Aligned_cols=249 Identities=18% Similarity=0.185 Sum_probs=189.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCC------CCcccEEEEEeeC-Cee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN------RRLANLLGCCCEG-DER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~~~~~~-~~~ 128 (488)
..|++++.||+|+||+||+|.. .+++.||||+++... ...+.+..|+.++..++| .+++.+++++... .+.
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 4577888899999999999994 568899999996432 223446677777777754 4588888888754 578
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC---------------
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV--------------- 193 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~--------------- 193 (488)
++|||++ +++|.+++.+ .+.+++..+..|+.||+.||.|||++.|||||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 9999988 7789998864 356999999999999999999999733999999999999998665
Q ss_pred -CeeeecCCCccccCCC-CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH----Hhh--ccc
Q 011353 194 -NPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----IRD--RNI 265 (488)
Q Consensus 194 -~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~~--~~~ 265 (488)
.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||....... +.. +..
T Consensus 285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~ 364 (467)
T PTZ00284 285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL 364 (467)
T ss_pred ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 4999999987654332 34578999999999999999999999999999999999999886432110 000 000
Q ss_pred -cc------------ccccc--ccCCC---------------ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 -QT------------LTDSC--LEGQF---------------SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 -~~------------~~~~~--~~~~~---------------~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.. +.... +.... .......+.+||.+||+.||.+|||+.++++|
T Consensus 365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 00 00000 00000 00123568899999999999999999999987
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=310.84 Aligned_cols=240 Identities=17% Similarity=0.232 Sum_probs=197.2
Q ss_pred ccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHH
Q 011353 63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 141 (488)
..||.|+||.||++.. .++..||+|.+..........+.+|+.++..++||||+++++++...+..++||||+++++|.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 4579999999999994 568899999997655445667889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----CccccCCC
Q 011353 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNLA 217 (488)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~~~~ 217 (488)
+++.. ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... ....++..
T Consensus 107 ~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 182 (297)
T cd06659 107 DIVSQ---TRLNEEQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPY 182 (297)
T ss_pred HHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCcc
Confidence 98843 4589999999999999999999998 9999999999999999999999999998654322 23457889
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCC
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 297 (488)
|+|||++.+..++.++|||||||++|||++|+.||........... ........ .......+..+.+++.+||+.+|
T Consensus 183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~l~~~i~~~l~~~P 259 (297)
T cd06659 183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPPK--LKNAHKISPVLRDFLERMLTREP 259 (297)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HhccCCCC--ccccCCCCHHHHHHHHHHhcCCc
Confidence 9999999988899999999999999999999988754321111100 00000000 01122345679999999999999
Q ss_pred CCCCChHHHHHH
Q 011353 298 RERPNPRSLVTA 309 (488)
Q Consensus 298 ~~Rps~~~il~~ 309 (488)
.+||++.+++++
T Consensus 260 ~~Rps~~~ll~~ 271 (297)
T cd06659 260 QERATAQELLDH 271 (297)
T ss_pred ccCcCHHHHhhC
Confidence 999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=304.88 Aligned_cols=248 Identities=19% Similarity=0.228 Sum_probs=196.4
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc----------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCe
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP----------DARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 127 (488)
|.+.+.||.|+||.||+|. ..+++.||||.++..... ..+.+.+|+.+++.++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 4556678999999999998 456889999988642111 12357889999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+++++|.+++... ..+++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||+++...
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred eEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC-CeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 99999999999999999653 5689999999999999999999998 99999999999999999999999999987654
Q ss_pred CC------CccccCCCCCCccccccCC--CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCCh
Q 011353 208 DG------RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (488)
Q Consensus 208 ~~------~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
.. ....++..|+|||.+.... ++.++||||||+++|++++|..|+...........................
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM 239 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccc
Confidence 32 1234678999999988654 789999999999999999999887543211110000000001111111222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 280 DEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 280 ~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+..+.+++.+||..+|.+|||+.+++++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 240 NLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 346789999999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=308.82 Aligned_cols=249 Identities=20% Similarity=0.281 Sum_probs=197.1
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.|++++.||.|+||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.++|+||+++++++......++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 467788899999999999995 4688999999864321 2245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
+++++|..++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCHKH-NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 999988887753 34589999999999999999999998 99999999999999999999999999988654432
Q ss_pred ccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhH-HHh--hccccc-----------------cc
Q 011353 211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIR--DRNIQT-----------------LT 269 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~--~~~~~~-----------------~~ 269 (488)
...++..|+|||++.+ ..++.++||||||+++|+|++|+.||.+.... ... ...... ..
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456788999999876 45788999999999999999999887643211 000 000000 00
Q ss_pred cccccCCC-----ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 DSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 ~~~~~~~~-----~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+...... ....+..+.+|+.+||+.+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000000 01235779999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=306.10 Aligned_cols=242 Identities=22% Similarity=0.345 Sum_probs=195.0
Q ss_pred cCCCCCCCeEEEEEeCC-------CCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 64 EHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.||.|+||.||+|+..+ +..+|||.+..... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 46999999999998532 25799999865432 34567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-----CeeeecCCCccc
Q 011353 136 PNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-----NPRLSCFGLMKN 205 (488)
Q Consensus 136 ~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-----~~kl~DfGla~~ 205 (488)
++++|.+++.+.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++ .++|+|||+++.
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM-HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC-CcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 9999999996421 23478999999999999999999998 999999999999998877 899999999875
Q ss_pred cCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCC
Q 011353 206 SRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 206 ~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
..... ....+..|+|||++.++.++.++|||||||++|+|+| |..||............ ........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV-----TAGGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH-----hcCCccCCc
Confidence 43321 2234578999999998899999999999999999998 88777643221111110 000111223
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 345678999999999999999999999999886
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=307.58 Aligned_cols=247 Identities=14% Similarity=0.201 Sum_probs=196.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEee------CCee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE------GDER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~------~~~~ 128 (488)
..|++++.+|.|+||.||+|.. .++..||+|++.... .....+..|+.++..+ +|+||+++++++.. ....
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 3556677789999999999994 668899999986543 2345688899999999 69999999999853 4578
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
+++|||+++|+|.+++.......+++..+..++.||+.||.|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~ 173 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 173 (282)
T ss_pred EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCcchhhhhc
Confidence 9999999999999999765556688999999999999999999998 999999999999999999999999999875432
Q ss_pred ----CCccccCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCCh
Q 011353 209 ----GRSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (488)
Q Consensus 209 ----~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
.....++..|+|||++. +..++.++|||||||++|+|++|..||......... ..............
T Consensus 174 ~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~ 249 (282)
T cd06636 174 TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----FLIPRNPPPKLKSK 249 (282)
T ss_pred cccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh----hhHhhCCCCCCccc
Confidence 22345788999999986 345888999999999999999999887543211100 00111111111122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 280 DEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 280 ~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+..+.+++.+||+.||.+|||+.+++++
T Consensus 250 ~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 250 KWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred ccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 356789999999999999999999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=310.14 Aligned_cols=246 Identities=17% Similarity=0.213 Sum_probs=198.1
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 133 (488)
..|+++++||.|+.+.||++...+.+.+|+|++..... ....-|.+|+.+|.+| .|.+||+|++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 57889999999999999999987777889888764332 2355699999999999 59999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC---
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~--- 210 (488)
|-+. +|..+|.........| .+..+..|++.++.++|.. ||||.||||.|+|+- .|.+||+|||+|..+...+
T Consensus 441 ~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~-gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 441 CGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH-GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred cccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh-ceeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence 9755 8999997654443345 7888999999999999998 999999999999996 6799999999999876653
Q ss_pred ---ccccCCCCCCccccccC-----------CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCC
Q 011353 211 ---SYSTNLAFTPPEYLRTG-----------RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (488)
Q Consensus 211 ---~~~~~~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
+..||+.||+||.+... +.+++|||||+|||||+|+.|+.||..- ...+ ..+..+.++...-+
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-~n~~--aKl~aI~~P~~~Ie 593 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-INQI--AKLHAITDPNHEIE 593 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-HHHH--HHHHhhcCCCcccc
Confidence 46799999999988532 2678999999999999999999776432 1111 23334444432222
Q ss_pred CChHH-HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 277 FSSDE-GTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 277 ~~~~~-~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+|... ..++.++|..||..||.+|||..++|++
T Consensus 594 fp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 594 FPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 32211 2349999999999999999999999987
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=309.05 Aligned_cols=247 Identities=19% Similarity=0.219 Sum_probs=199.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..|+++..||.|+||.||+|.. .+++.||+|++...... ....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 3466778889999999999994 56889999998644322 2346889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 212 (488)
||+++ +|.+++... ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.........
T Consensus 95 e~~~g-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~-~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~ 171 (307)
T cd06607 95 EYCLG-SASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSH-ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSF 171 (307)
T ss_pred HhhCC-CHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEECCCCCEEEeecCcceecCCCCCc
Confidence 99974 787777532 34689999999999999999999998 9999999999999999999999999998877666666
Q ss_pred ccCCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 213 ~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
.+++.|+|||++. ...++.++||||||+++|||+||..|+.............. .......+...+..+.+++
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li 247 (307)
T cd06607 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ----NDSPTLSSNDWSDYFRNFV 247 (307)
T ss_pred cCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc----CCCCCCCchhhCHHHHHHH
Confidence 7888999999885 35588899999999999999999988754322111100000 0001111233567899999
Q ss_pred HHhccCCCCCCCChHHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L 310 (488)
.+||+.+|++||++.+++.+.
T Consensus 248 ~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 248 DSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred HHHhcCChhhCcCHHHHhcCh
Confidence 999999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-39 Score=305.04 Aligned_cols=249 Identities=14% Similarity=0.161 Sum_probs=195.1
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEe-----eCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCC-----EGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~-----~~~~~~ 129 (488)
.+|++++.||+|+||.||++. ..+++.+|+|++.... .....+.+|+.++..+ +||||+++++++. .++..+
T Consensus 18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 96 (286)
T cd06638 18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW 96 (286)
T ss_pred cceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence 355777888999999999998 4568899999986533 2235688899999999 6999999999884 345689
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++....
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~ 175 (286)
T cd06638 97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN-KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 175 (286)
T ss_pred EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC-CccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence 999999999999987531 234689999999999999999999998 99999999999999999999999999987643
Q ss_pred CC----CccccCCCCCCcccccc-----CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC
Q 011353 208 DG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 208 ~~----~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
.. ....+++.|+|||++.. ..++.++|||||||++|+|++|+.|+........... ....... ....+
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~-~~~~~~~--~~~~~ 252 (286)
T cd06638 176 STRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK-IPRNPPP--TLHQP 252 (286)
T ss_pred cCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh-ccccCCC--cccCC
Confidence 32 23457889999999853 4478899999999999999999988754321111000 0000000 00112
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
...+..+.+++.+||+.+|++|||+.++++++
T Consensus 253 ~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 253 ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 22456799999999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=307.52 Aligned_cols=243 Identities=19% Similarity=0.238 Sum_probs=201.3
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.|.+++.||.|+||.||++.. .+++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 467788899999999999994 5689999999865321 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-Ccc
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~ 212 (488)
|+++++|.+++.. ...+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSL-DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999999965 35689999999999999999999998 9999999999999999999999999998876544 234
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.+++.|+|||.+.+...+.++||||||+++|+|++|+.||............... ...++...+..+.+++.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG------KVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CccCCccCCHHHHHHHHHH
Confidence 5788999999998888899999999999999999999887654322111111100 1123334567899999999
Q ss_pred ccCCCCCCC-----ChHHHHHH
Q 011353 293 LQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 293 l~~~p~~Rp-----s~~~il~~ 309 (488)
|..+|.+|+ ++.+++++
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ccCCHHHccCcccCCHHHHHcC
Confidence 999999998 77777765
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=299.66 Aligned_cols=245 Identities=28% Similarity=0.432 Sum_probs=198.7
Q ss_pred cccccCCCCCCCeEEEEEeCC-----CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 60 NIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.+++.||.|+||.||++...+ +..||+|+++..... ....+..|+.++..++|+||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 356778999999999999543 388999999765433 46679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc--
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-- 211 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~-- 211 (488)
|+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-CeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 99999999999753333389999999999999999999999 999999999999999999999999999876554311
Q ss_pred ---cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 212 ---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 212 ---~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
..+++.|+|||.+.+..++.++||||||+++++|++ |..|+................ ....+...+..+.+
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-----RLPKPENCPPEIYK 235 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-----CCCCCCcCCHHHHH
Confidence 225678999999988889999999999999999999 666554332221111111110 11122335678999
Q ss_pred HHHHhccCCCCCCCChHHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~L 310 (488)
++.+||..+|++|||+.++++.|
T Consensus 236 ~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 236 LMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHCcCChhhCcCHHHHHhhC
Confidence 99999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=308.81 Aligned_cols=249 Identities=18% Similarity=0.235 Sum_probs=195.0
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
++..++.||.|+||.||++. ..+++.||+|.+..... .....+.+|+.++.++. |+||+++++++...+..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 34456778999999999999 45689999999875432 23456889999999996 99999999999999999999999
Q ss_pred CCCCCHHhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 135 MPNDTLAKHL---FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 135 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
+.. +|.++. .......+++..+..++.|++.||+|||+..+++||||||+||+++.++.++|+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 163 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA 163 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence 864 565543 22234569999999999999999999997448999999999999999999999999998754332
Q ss_pred -CccccCCCCCCccccccC---CCCCCccchhhHHHHHHHHhCCCCCCchhh--HHHhhccccccccccccCCCChHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....++..|+|||++.+. .++.++|||||||++|+|++|+.||..... ...... ... ..+......+...+.
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~ 241 (288)
T cd06616 164 KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV-VKG-DPPILSNSEEREFSP 241 (288)
T ss_pred cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh-cCC-CCCcCCCcCCCccCH
Confidence 234578899999999876 689999999999999999999988764321 111100 000 011111122234667
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+|+.+||+.+|++|||+.+|+.+
T Consensus 242 ~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 242 SFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 89999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=309.00 Aligned_cols=248 Identities=17% Similarity=0.137 Sum_probs=198.1
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.|++++.||.|+||.||++.. .+++.|++|.+..... .....+.+|+.+++.++||||+++++.+...+..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 466778889999999999994 5578999999875432 224468899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|++|++|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++.....
T Consensus 82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 9999999999965 34689999999999999999999998 9999999999999999999999999988632100
Q ss_pred ---------------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccccccccc
Q 011353 210 ---------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 210 ---------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
....++..|+|||.+.+..++.++|+|||||++|||++|..||.+.................
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~--- 235 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW--- 235 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC---
Confidence 11245778999999988889999999999999999999999887543332222211111000
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.......+..+.+++.+||+.+|++||++.++.+.|+
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 236 PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 0111135677999999999999999999655555444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=308.75 Aligned_cols=247 Identities=18% Similarity=0.240 Sum_probs=202.9
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
...|.+++.||.|+||.||++. ..++..||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 4567788899999999999998 456889999998755444556789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++++|.+++.+ ..+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...... .
T Consensus 98 ~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~-gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (293)
T cd06647 98 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (293)
T ss_pred CCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CEeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence 999999999953 3588999999999999999999998 9999999999999999999999999987654332 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+++.|++||.+.+..++.++|||||||++|++++|+.||............ ..........+...+..+.+++.
T Consensus 174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---ATNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh---hcCCCCCCCCccccCHHHHHHHH
Confidence 235678899999998888999999999999999999999888654221110000 00000011112334567999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||..+|++||++.+++.+
T Consensus 251 ~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 251 RCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999999988
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=302.98 Aligned_cols=243 Identities=18% Similarity=0.215 Sum_probs=193.3
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-----ccHHHHHHHHHHHhccCCCCcccEEEEEee--CCeeEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL 130 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 130 (488)
|.+.+.+|+|+||.||++.. .++..||+|.+..... .....+.+|+.+++.++||||+++++++.+ ....++
T Consensus 4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 83 (266)
T cd06651 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI 83 (266)
T ss_pred ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence 44556679999999999994 5688999999864321 123468889999999999999999999875 356889
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
++||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++.....
T Consensus 84 ~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~-~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 84 FMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 9999999999999964 34589999999999999999999998 9999999999999999999999999998754321
Q ss_pred ------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 210 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....++..|+|||++.+..++.++|||||||++|+|++|+.||.......... ..........++...+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 236 (266)
T cd06651 161 MSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF----KIATQPTNPQLPSHISE 236 (266)
T ss_pred ccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHH----HHhcCCCCCCCchhcCH
Confidence 12346788999999998889999999999999999999998875432111111 11111112233444566
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+++ .||..+|++||++.+++.|
T Consensus 237 ~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 237 HARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 788888 6888999999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=300.36 Aligned_cols=249 Identities=17% Similarity=0.260 Sum_probs=198.6
Q ss_pred ccccccCCCCCCCeEEEEEeCC--CCEEEEEEcCCCCC----------ccHHHHHHHHHHHhc-cCCCCcccEEEEEeeC
Q 011353 59 ENIVSEHGEKAPNVVYKGKLEN--QFRIAVKRFNRSAW----------PDARQFLEEARAVGQ-LRNRRLANLLGCCCEG 125 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~ 125 (488)
|.+++.||.|+||.||+|.... +..+|+|.+..... ....++.+|+.++.+ ++||||+++++++.+.
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 4567788999999999999543 78899998863221 123457788888875 6999999999999999
Q ss_pred CeeEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 126 DERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 126 ~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
+..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+..+++|+||+|+||+++.++.++|+|||++
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 161 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLA 161 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccce
Confidence 999999999999999998843 234468999999999999999999997438999999999999999999999999998
Q ss_pred cccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChH
Q 011353 204 KNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (488)
Q Consensus 204 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...... ....++..|++||.+.+..++.++||||||+++|+|++|+.||..................+. ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~ 237 (269)
T cd08528 162 KQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL----PEGM 237 (269)
T ss_pred eecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC----Cccc
Confidence 765543 234568899999999988899999999999999999999988754332222111111111111 1113
Q ss_pred HHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 281 EGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 281 ~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.+..+.+++.+||+.||++||++.++..++.
T Consensus 238 ~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 238 YSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 4578999999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=306.26 Aligned_cols=249 Identities=21% Similarity=0.268 Sum_probs=198.3
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+|++.+.||.|+||.||+|.. .++..||||++..... .....+.+|+.+++.++||||+++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 367788899999999999994 5788999999876542 2345789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
+ +++|.+++... ..++++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 81 M-PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHAN-GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred c-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 9 99999998653 35699999999999999999999998 99999999999999999999999999987654432
Q ss_pred -ccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc--------------ccccc----
Q 011353 211 -SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------QTLTD---- 270 (488)
Q Consensus 211 -~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------~~~~~---- 270 (488)
...++..|+|||.+.+.. ++.++||||+||++++|+||..+|............. ..+.+
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 345688999999987544 6889999999999999999976664432110000000 00000
Q ss_pred --cccc----CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 --SCLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 --~~~~----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.... ....+..+..+.+++.+||+.+|.+|||+++++.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 00112345789999999999999999999999886
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-39 Score=302.13 Aligned_cols=250 Identities=15% Similarity=0.142 Sum_probs=195.0
Q ss_pred HHHHhcCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC
Q 011353 49 LRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (488)
Q Consensus 49 ~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 126 (488)
+....++|...+.++ +|.|+||.||++. ..++..+|+|.+........ |+.....+ +||||+++++.+...+
T Consensus 9 ~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 9 LVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 333344444444443 5999999999999 56788999999875432211 22223223 6999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-CeeeecCCCccc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKN 205 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~DfGla~~ 205 (488)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++ .++|+|||++..
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~ 159 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKH-NIIHNDIKLENVLYDRAKDRIYLCDYGLCKI 159 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence 999999999999999999653 3799999999999999999999998 999999999999999888 999999999987
Q ss_pred cCCCCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 206 SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 206 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
........++..|+|||++.+..++.++|||||||++|+|++|+.||................... ....+...+..+
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 237 (267)
T PHA03390 160 IGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK--KLPFIKNVSKNA 237 (267)
T ss_pred cCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc--cCCcccccCHHH
Confidence 776666778899999999998889999999999999999999998886432211111111111110 112233467889
Q ss_pred HHHHHHhccCCCCCCCC-hHHHHHH
Q 011353 286 VRLASRCLQYEPRERPN-PRSLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps-~~~il~~ 309 (488)
.+++.+||+.+|.+||+ +.+++++
T Consensus 238 ~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 238 NDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHHHHHhccChhhCCchHHHHhcC
Confidence 99999999999999996 6888865
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=309.67 Aligned_cols=248 Identities=18% Similarity=0.202 Sum_probs=194.2
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|.+++.||.|+||.||+|.. .+|..||+|.++.... .....+.+|+.+++.++||||+++++++.+....++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 56778889999999999994 5688999999875322 12345788999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
++ +|.+++... ...+++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||+++..... ..
T Consensus 82 ~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 82 DQ-DLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred CC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 75 788887543 34689999999999999999999998 9999999999999999999999999998765432 23
Q ss_pred cccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhh-HHHhhc--------------ccccccccccc-
Q 011353 212 YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDR--------------NIQTLTDSCLE- 274 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~~~--------------~~~~~~~~~~~- 274 (488)
..++..|+|||++.+.. ++.++|||||||++|+|+||+.|+..... ...... ......+....
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 34578899999987654 78999999999999999999987543211 100000 00000000000
Q ss_pred --------CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 275 --------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 275 --------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.......+.++.+++.+||+.||.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 01112346789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=304.04 Aligned_cols=251 Identities=17% Similarity=0.230 Sum_probs=198.4
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~E 133 (488)
.++.++.||.|++|.||++.. .+++.+|+|.+..... .....+.+|+++++.++||||+++++++.+. +.+++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 356677889999999999995 5688999999875433 2356689999999999999999999998653 46899999
Q ss_pred cCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 134 YMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|+++++|.+++.. .....+++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR-KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence 9999999998753 2235689999999999999999999998 9999999999999999999999999998754432
Q ss_pred CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh----HHHhhccccccccccccCCCC--hHHHH
Q 011353 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEGQFS--SDEGT 283 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~ 283 (488)
....++..|++||.+.+..++.++|||||||++|+|++|+.|+..... ..................... ...+.
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd06621 161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSE 240 (287)
T ss_pred ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHH
Confidence 234567889999999988899999999999999999999988764411 000000000000011111111 22467
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+++.+||+.+|.+|||+.+++.+
T Consensus 241 ~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 241 EFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 89999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=306.04 Aligned_cols=242 Identities=17% Similarity=0.239 Sum_probs=197.7
Q ss_pred ccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
..+.||.|++|.||++. ..+++.+++|+++.......+.+.+|+.+++.++||||+++++++...+..++|+||+++++
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~ 102 (285)
T cd06648 23 NFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGA 102 (285)
T ss_pred cceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCC
Confidence 34566999999999999 45788999999875544445668899999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----CccccC
Q 011353 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTN 215 (488)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~~ 215 (488)
|.+++.. ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++...... ....++
T Consensus 103 L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 178 (285)
T cd06648 103 LTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGT 178 (285)
T ss_pred HHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCC
Confidence 9999864 4589999999999999999999998 9999999999999999999999999987654332 234578
Q ss_pred CCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccC
Q 011353 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (488)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (488)
+.|+|||.+.+..++.++|||||||++|+|++|+.||............... ..... ..+...+..+.+++.+||+.
T Consensus 179 ~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~li~~~l~~ 255 (285)
T cd06648 179 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPKL--KNLHKVSPRLRSFLDRMLVR 255 (285)
T ss_pred ccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCCC--cccccCCHHHHHHHHHHccc
Confidence 8999999999888999999999999999999999887543211111111111 10110 11222457899999999999
Q ss_pred CCCCCCChHHHHHH
Q 011353 296 EPRERPNPRSLVTA 309 (488)
Q Consensus 296 ~p~~Rps~~~il~~ 309 (488)
+|++|||+.+++++
T Consensus 256 ~p~~Rpt~~~il~~ 269 (285)
T cd06648 256 DPAQRATAAELLNH 269 (285)
T ss_pred ChhhCcCHHHHccC
Confidence 99999999999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=301.52 Aligned_cols=244 Identities=16% Similarity=0.178 Sum_probs=195.0
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-----ccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 129 (488)
+|++.+.||+|+||.||++.. .++..||||.+..... .....+.+|+.+++.++||||+++++++.+. ..++
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 455667789999999999994 5689999999863221 1234688899999999999999999998764 4678
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC-
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~- 208 (488)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 83 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 83 IFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSN-MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 99999999999999864 24588899999999999999999998 999999999999999999999999999875432
Q ss_pred ------CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 209 ------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 209 ------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
.....++..|+|||++.+..++.++|||||||++|+|++|+.||........... ..........+...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 235 (265)
T cd06652 160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPVLPPHVS 235 (265)
T ss_pred cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH----HhcCCCCCCCchhhC
Confidence 1234577899999999888899999999999999999999988754321111111 111111223445566
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+.+++.+||. +|++||++.+++++
T Consensus 236 ~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 236 DHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 789999999995 89999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=307.68 Aligned_cols=251 Identities=17% Similarity=0.227 Sum_probs=202.1
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+..++.||.|+||.||++. ..++..||+|.+...... ....+.+|+.+++.++|||++++++++.+....++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 4456778999999999999 456889999998754322 234688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcccc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST 214 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 214 (488)
++| +|.+.+... ..++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..........+
T Consensus 107 ~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (317)
T cd06635 107 CLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG 183 (317)
T ss_pred CCC-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence 975 788777542 45689999999999999999999998 999999999999999999999999999887666666678
Q ss_pred CCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 215 ~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
++.|+|||++. .+.++.++|||||||++|+|++|+.||............ .............+..+.+++.+
T Consensus 184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~ 259 (317)
T cd06635 184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNESPTLQSNEWSDYFRNFVDS 259 (317)
T ss_pred CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHH----HhccCCCCCCccccHHHHHHHHH
Confidence 89999999974 356889999999999999999999887543211111111 00000111122355679999999
Q ss_pred hccCCCCCCCChHHHHHHHHhhhcC
Q 011353 292 CLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
||+.+|.+||++.++++++..+...
T Consensus 260 ~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 260 CLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred HccCCcccCcCHHHHHhChhhhccC
Confidence 9999999999999999987765543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=302.14 Aligned_cols=242 Identities=16% Similarity=0.242 Sum_probs=199.7
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
|.+++.||.|+||.||+|.. .++..||||.+..... .....+.+|+.++..++||||+++++++..+...++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 45677889999999999984 5688999999865432 234568899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~ 212 (488)
+++|.+++. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 86 ~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06641 86 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccC-CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence 999999985 34689999999999999999999998 9999999999999999999999999998765432 223
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.++..|+|||.+.+..++.++|+|||||++|+|++|..|+............ ........+...+.++.+++.+|
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~ 236 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI-----PKNNPPTLEGNYSKPLKEFVEAC 236 (277)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHH-----hcCCCCCCCcccCHHHHHHHHHH
Confidence 5678899999998888999999999999999999999877543221111110 01111123334567899999999
Q ss_pred ccCCCCCCCChHHHHHH
Q 011353 293 LQYEPRERPNPRSLVTA 309 (488)
Q Consensus 293 l~~~p~~Rps~~~il~~ 309 (488)
|+.+|.+||++.+++++
T Consensus 237 l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 237 LNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCChhhCcCHHHHHhC
Confidence 99999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=303.05 Aligned_cols=246 Identities=18% Similarity=0.281 Sum_probs=198.3
Q ss_pred cccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
+..+.||+|++|.||++. ..++..||+|.++..... ..+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~ 82 (268)
T cd06630 3 LKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFV 82 (268)
T ss_pred cccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEE
Confidence 444567999999999999 567899999998743311 2356889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-CeeeecCCCccccCCC--
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~DfGla~~~~~~-- 209 (488)
||+++++|.+++.+ .+++++..+..++.|++.||.|||++ |++|+||+|+||+++.++ .++|+|||++......
T Consensus 83 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~-~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 83 EWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT 159 (268)
T ss_pred eccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence 99999999999964 34689999999999999999999999 999999999999998776 5999999998765432
Q ss_pred ------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 210 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....++..|+|||.+.+..++.++||||+|+++++|++|..||.......... ..............+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA-LIFKIASATTAPSIPEHLSP 238 (268)
T ss_pred cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH-HHHHHhccCCCCCCchhhCH
Confidence 12346789999999988889999999999999999999998875332110000 01111111112334455678
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+++.+||..+|.+|||+.+++++
T Consensus 239 ~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 239 GLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 89999999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=304.11 Aligned_cols=249 Identities=18% Similarity=0.255 Sum_probs=201.1
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
++++++.||.|++|.||++.. .+++.||+|.+..... .....+.+|+++++.++||||+++++.+...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 456677889999999999995 4688999999876543 23456899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccCcceeeCCCCCeeeecCCCccccCCC--Ccc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY 212 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~~ 212 (488)
++++|.+++.... ..+++..+..++.|++.||.|||+ . +++|+||||+||++++++.++|+|||.+...... ...
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~-~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH-KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF 159 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC-CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence 9999999997532 568999999999999999999999 7 9999999999999999999999999998754322 125
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHH-hhccccccccccccCCCChH-HHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-RDRNIQTLTDSCLEGQFSSD-EGTELVRLAS 290 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 290 (488)
.++..|+|||.+.+..++.++||||||+++|+|++|+.|+........ ............ ....+.. .+..+.++|.
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~ 238 (265)
T cd06605 160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-PPRLPSGKFSPDFQDFVN 238 (265)
T ss_pred cCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-CCCCChhhcCHHHHHHHH
Confidence 577899999999988899999999999999999999988764310000 000000011110 1112222 5678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||..+|++|||+.+++.+
T Consensus 239 ~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 239 LCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHcCCCchhCcCHHHHhhC
Confidence 9999999999999999876
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-39 Score=301.05 Aligned_cols=246 Identities=18% Similarity=0.231 Sum_probs=201.9
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEee--CCeeEEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVA 132 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 132 (488)
+|++++.||.|+||.||++. ..++..||+|.+..... .....+..|+++++.++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 36678889999999999998 45788999999875432 234568899999999999999999998754 45689999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhh-----cCCCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCT-----SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 133 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH-----~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
||+++++|.+++... ....+++..++.++.||+.||.||| +. +++|+||||+||++++++.+||+|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~-~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN-TVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC-cceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999999653 2456899999999999999999999 77 899999999999999999999999999887
Q ss_pred cCCCC----ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 206 SRDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 206 ~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..... ...++..|+|||.+.+..++.++||||||+++++|++|..|+............. .......+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~ 234 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK-----EGKFRRIPYRY 234 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh-----cCCCCCCcccc
Confidence 65432 3457889999999998889999999999999999999998876543222211111 11112334456
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+..+.+++.+||+.+|.+|||+.+|+++
T Consensus 235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 235 SSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 7889999999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=299.02 Aligned_cols=244 Identities=18% Similarity=0.264 Sum_probs=199.1
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|.+.+.||.|+||.||+|.. .+++.|++|.++..... ....+.+|+.+++.++|+||+++++.+...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 56677889999999999994 57889999999765443 4667999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----- 210 (488)
++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~ 158 (264)
T cd06626 82 SGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSH-GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE 158 (264)
T ss_pred CCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence 99999999964 34588999999999999999999998 99999999999999999999999999987654321
Q ss_pred ---ccccCCCCCCccccccCC---CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCCh--HHH
Q 011353 211 ---SYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS--DEG 282 (488)
Q Consensus 211 ---~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 282 (488)
...+++.|++||++.+.. .+.++||||||+++|++++|+.||............... ......+. ..+
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 234 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA----GHKPPIPDSLQLS 234 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc----CCCCCCCcccccC
Confidence 234578999999998766 889999999999999999999887543111110000000 00111222 236
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+.+++.+||+.+|.+|||+.+++.+
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 788999999999999999999998864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-39 Score=305.52 Aligned_cols=250 Identities=18% Similarity=0.266 Sum_probs=194.8
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
...|++++.||.|++|.||+|.. .+++.||||.+...... ....+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 35678888999999999999995 46889999998754322 23457789999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++ +|.+++.+.. ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~-~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (291)
T cd07844 84 YLDT-DLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY 160 (291)
T ss_pred cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence 9975 8999886533 3689999999999999999999998 9999999999999999999999999998654321
Q ss_pred CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhh--HHHh---h-------ccccccc-------
Q 011353 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIR---D-------RNIQTLT------- 269 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~---~-------~~~~~~~------- 269 (488)
....++..|+|||++.+ ..++.++||||||+++|+|++|+.||..... +... . .......
T Consensus 161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07844 161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP 240 (291)
T ss_pred cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence 22345788999999876 4578899999999999999999988754321 1000 0 0000000
Q ss_pred -------cccccCCCChHHH--HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 -------DSCLEGQFSSDEG--TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 -------~~~~~~~~~~~~~--~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
........ .... ..+.+++.+||+.+|.+|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 241 YSFPFYPPRPLINHA-PRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ccccccCChhHHHhC-cCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000000 0112 678899999999999999999998865
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=309.00 Aligned_cols=243 Identities=15% Similarity=0.227 Sum_probs=183.5
Q ss_pred ccCCCCCCCeEEEEEeC---CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEee--CCeeEEEEecCCC
Q 011353 63 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPN 137 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E~~~~ 137 (488)
.+||+|+||.||+|... ++..||+|.+.... ....+.+|+.+++.++||||+++++++.. ....++||||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 35799999999999954 35789999987543 23457899999999999999999999854 4678999999965
Q ss_pred CCHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee----CCCCCeeeecCCCcccc
Q 011353 138 DTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 138 gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~DfGla~~~ 206 (488)
+|.+++... ....+++..+..++.||+.||.|||+. +++||||||+|||+ +.++.+||+|||+++..
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 787777421 123588999999999999999999998 99999999999999 56689999999999865
Q ss_pred CCC-------CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh----------------
Q 011353 207 RDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---------------- 262 (488)
Q Consensus 207 ~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---------------- 262 (488)
... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||.....+....
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 432 223568899999999764 47899999999999999999998875321110000
Q ss_pred ----cccc---------ccccccccC------------CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 263 ----RNIQ---------TLTDSCLEG------------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 263 ----~~~~---------~~~~~~~~~------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+. ......... .........+.+++.+||+.||.+|||+.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000 000000000 0001123568899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=300.99 Aligned_cols=248 Identities=15% Similarity=0.182 Sum_probs=197.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC------ee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD------ER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------~~ 128 (488)
.+|++++.||.|++|.||+|.. .+++.+++|++..... ....+.+|+.+++++ .|+||+++++++.... ..
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 4667788889999999999995 4678999999876542 346789999999999 6999999999997644 48
Q ss_pred EEEEecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 129 LLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
++||||+++++|.+++.... +..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN-KVIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEEccCCeEEECCCccceec
Confidence 99999999999999986533 45789999999999999999999998 9999999999999999999999999998754
Q ss_pred CCC----CccccCCCCCCcccccc-----CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCC
Q 011353 207 RDG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (488)
Q Consensus 207 ~~~----~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
... ....++..|+|||++.. ..++.++|||||||++++|++|..||.................. .-..
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~ 240 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP---TLKS 240 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC---CCCc
Confidence 332 23456889999998864 34678999999999999999999887543211111111111000 1111
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+...+..+.+++.+||..||++|||+.+++++
T Consensus 241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 241 PENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 22356789999999999999999999999875
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=305.51 Aligned_cols=252 Identities=17% Similarity=0.217 Sum_probs=198.0
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 129 (488)
++..|++++.||.|+||.||+|.. .+++.+|+|.++..... ....+.+|+.++.+++||||+++++++... +..+
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 445677888899999999999995 46889999999754322 234577899999999999999999999877 8899
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+.+ +|.+++.... ..+++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 83 lv~e~~~~-~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred EEehhcCc-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99999975 8999886532 3589999999999999999999998 9999999999999999999999999998865443
Q ss_pred ----CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc---------------------
Q 011353 210 ----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR--------------------- 263 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--------------------- 263 (488)
....+++.|+|||.+.+.. ++.++|+||||+++|+|++|..||...........
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence 2234578899999987644 68899999999999999999988754321110000
Q ss_pred ----cccccccccccCCCChH-HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 264 ----NIQTLTDSCLEGQFSSD-EGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 264 ----~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.............++.. .+..+.+++.+||+.+|++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000111122222 46779999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=305.67 Aligned_cols=249 Identities=18% Similarity=0.242 Sum_probs=196.3
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|++++.||.|++|.||+|.. .++..||||.++.... .....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 56778889999999999984 5688999999875432 22356889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
. ++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 6 5899988765556789999999999999999999998 9999999999999999999999999998755332 22
Q ss_pred cccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccc--------------cc------cc
Q 011353 212 YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------TL------TD 270 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------------~~------~~ 270 (488)
..++..|+|||++.+.. ++.++|||||||++|+|+||+.||.............. .+ ..
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 34578899999987654 68899999999999999999988865422110000000 00 00
Q ss_pred ccccC---CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 SCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 ~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... ......+..+.+++.+||+.||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000 0011245678999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=307.02 Aligned_cols=249 Identities=20% Similarity=0.276 Sum_probs=196.2
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.|++++.||.|+||.||+|.. .+++.||+|++...... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 467788899999999999995 45889999998654322 245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++++|.++... ...+++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 999999887753 33589999999999999999999998 9999999999999999999999999998764332 2
Q ss_pred ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHH-hh-----ccc----------c----ccc
Q 011353 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-RD-----RNI----------Q----TLT 269 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~-----~~~----------~----~~~ 269 (488)
...++..|+|||++.+. .++.++||||||+++|||++|+.||........ .. ... . ...
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 23467889999998753 478899999999999999999977754321100 00 000 0 000
Q ss_pred ccccc-----CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 DSCLE-----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 ~~~~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+... ....+..+..+.+++.+||+.+|++||++.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000 00012346789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=299.31 Aligned_cols=244 Identities=20% Similarity=0.216 Sum_probs=198.4
Q ss_pred ccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCC-----ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
|+..+.||.|+||.||+|... ++..|++|.+..... ...+.+.+|+.+++.++|+||+++++++......++|+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 344466799999999999954 788999999865331 13456899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
||+++++|.+++.+ ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 158 (258)
T cd06632 82 ELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA 158 (258)
T ss_pred EecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence 99999999999965 34589999999999999999999998 9999999999999999999999999998765433
Q ss_pred CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
....++..|++||.+.... ++.++|+|||||++|+|++|+.||........... .. ........+...+..+.++
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~l 234 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK-IG---RSKELPPIPDHLSDEAKDF 234 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH-HH---hcccCCCcCCCcCHHHHHH
Confidence 2345688899999988766 89999999999999999999988754321111100 00 0001112334456789999
Q ss_pred HHHhccCCCCCCCChHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~ 309 (488)
+.+||+.+|.+||++.+++.+
T Consensus 235 i~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 235 ILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHHHhhcCcccCcCHHHHhcC
Confidence 999999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=303.12 Aligned_cols=248 Identities=15% Similarity=0.123 Sum_probs=194.9
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeC-----CeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG-----DERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-----~~~~ 129 (488)
.+|.++..||.|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +||||+++++++... +..+
T Consensus 22 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 22 DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence 3456777789999999999994 678899999987543 2345678899999999 799999999998754 3589
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus 101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~ 179 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 179 (291)
T ss_pred EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence 999999999999988531 235689999999999999999999998 99999999999999999999999999987644
Q ss_pred CC----CccccCCCCCCccccccC-----CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC
Q 011353 208 DG----RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 208 ~~----~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
.. ....++..|+|||++... .++.++|||||||++|+|++|+.|+................. . .-..+
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~ 256 (291)
T cd06639 180 STRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPP-P--TLLHP 256 (291)
T ss_pred cccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCC-C--CCCcc
Confidence 32 234567889999998643 368899999999999999999988764321111100000000 0 00112
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+..+.+++.+||+.+|++||++.+++++
T Consensus 257 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 257 EKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 2345679999999999999999999999886
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=303.79 Aligned_cols=246 Identities=18% Similarity=0.250 Sum_probs=192.9
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHH-HhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARA-VGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
++++++.||+|+||.||++.. .+|..||+|+++.... ....++..|+.. ++.++||||+++++++...+..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 467788889999999999994 5689999999876432 233456667665 5666899999999999999999999999
Q ss_pred CCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 135 MPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
++ |+|.+++... ....+++..++.++.||+.||.|||++.+++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK 160 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 96 5888887542 23468999999999999999999998558999999999999999999999999998765432
Q ss_pred CccccCCCCCCcccccc----CCCCCCccchhhHHHHHHHHhCCCCCCchh--hHHHhhccccccccccccCCCChHHHH
Q 011353 210 RSYSTNLAFTPPEYLRT----GRVTPESVMYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....++..|+|||++.+ ..++.++|+|||||++|+|++|+.||.... .+.... ..............+.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 235 (283)
T cd06617 161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ-----VVEEPSPQLPAEKFSP 235 (283)
T ss_pred ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH-----HHhcCCCCCCccccCH
Confidence 22456788999998865 346889999999999999999998875321 111111 0100000011123467
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+++.+||..+|.+|||+.+++.+
T Consensus 236 ~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 236 EFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 89999999999999999999999886
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=301.82 Aligned_cols=247 Identities=17% Similarity=0.237 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..|.+...+|.|++|.||++... ++..|++|++..... ....+.+|+++++.++|+||+++++.+...+..++|+||+
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 97 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYM 97 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEecc
Confidence 34566677899999999999964 688999999976543 4567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
++++|.+++.... ..+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 98 ~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~-gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 175 (286)
T cd06614 98 DGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS 175 (286)
T ss_pred CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhcc
Confidence 9999999997633 3699999999999999999999998 9999999999999999999999999987654332 23
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..++..|++||++.+..++.++|||||||++|+|++|+.|+.................. ....+...+..+.+++.+
T Consensus 176 ~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~ 252 (286)
T cd06614 176 VVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP---PLKNPEKWSPEFKDFLNK 252 (286)
T ss_pred ccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC---CCcchhhCCHHHHHHHHH
Confidence 34678899999998888999999999999999999999887543221111110000000 011122256789999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||+.+|.+|||+.+++.+
T Consensus 253 ~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 253 CLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HhccChhhCcCHHHHhhC
Confidence 999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=298.93 Aligned_cols=245 Identities=17% Similarity=0.252 Sum_probs=200.8
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|.+.+.||.|+||.||++.. .++..||+|.+..... ...+.+.+|+.+++.++|+||+++++.+.+.+..++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 45667789999999999994 5688999999875422 23456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC-eeeecCCCccccCCCC----
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-PRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-~kl~DfGla~~~~~~~---- 210 (488)
++++|.+++.+.....+++..+..++.|++.||.|||+. +++|+||||+||++++++. ++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 999999999765555689999999999999999999998 9999999999999988764 6999999987654432
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+++.|+|||++.+..++.++||||||+++++|++|..|+................. .......+..+.+++.
T Consensus 161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~ 235 (257)
T cd08225 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF-----APISPNFSRDLRSLIS 235 (257)
T ss_pred ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC-----CCCCCCCCHHHHHHHH
Confidence 23467889999999888899999999999999999999988765432222211111111 1122334568999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||..+|++|||+.+++++
T Consensus 236 ~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 236 QLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHhccChhhCcCHHHHhhC
Confidence 9999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=301.53 Aligned_cols=238 Identities=18% Similarity=0.262 Sum_probs=194.4
Q ss_pred CCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
||.|+||+||++. ..+++.||+|.+..... .....+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 5999999999998 45688999999864321 2244578899999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---CccccCCC
Q 011353 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA 217 (488)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~~~~~~~ 217 (488)
.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 9999765445699999999999999999999998 9999999999999999999999999998765432 23356788
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh----HHHhhccccccccccccCCCChHHHHHHHHHHHHhc
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 293 (488)
|++||++.+..++.++|||||||++++|++|+.||..... ..+...... .....+...++.+.+++.+||
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l 233 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE------MAVEYPDKFSPEAKDLCEALL 233 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc------ccccCCccCCHHHHHHHHHHc
Confidence 9999999888899999999999999999999988754321 111111110 111233345678999999999
Q ss_pred cCCCCCCC-----ChHHHHHH
Q 011353 294 QYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 294 ~~~p~~Rp-----s~~~il~~ 309 (488)
+.+|.+|| ++.+++.+
T Consensus 234 ~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 234 QKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred cCChhHccCCCcccHHHHHhC
Confidence 99999999 66667664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=305.16 Aligned_cols=248 Identities=21% Similarity=0.197 Sum_probs=195.0
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-----cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
|++++.||.|+||.||+|.. .+++.||||.++..... ....+..|+.+++.++|+||+++++++.+.+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 55667789999999999994 56889999999765432 2345778999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
||+ +|+|.+++.... ..+++..+..++.||+.||.|||++ +++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN-WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 999 889999996533 3699999999999999999999998 9999999999999999999999999998765443
Q ss_pred -CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc--------------ccccccc-
Q 011353 210 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------QTLTDSC- 272 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------~~~~~~~- 272 (488)
....+++.|+|||.+.+ ..++.++|||||||++++|++|..+|............. .......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence 22345678999999865 457889999999999999999976654322100000000 0000000
Q ss_pred --cc-----CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 273 --LE-----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 273 --~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.. .......+..+.+++.+||+.+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00 00112346789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=301.28 Aligned_cols=241 Identities=21% Similarity=0.245 Sum_probs=200.9
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
|++++.||.|+||.||++.. .++..||+|.+..... ...+.+.+|++++++++||||+++++.+.+....++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 56778889999999999995 4688999999975432 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---Cc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 211 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~ 211 (488)
+.+++|.+++... .++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 82 LLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK-GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 9999999999652 4689999999999999999999998 9999999999999999999999999998765543 23
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh---HHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
..++..|+|||.+.+..++.++|+||||+++|+|++|..|+..... ....... .. .....+...+..+.++
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~ 232 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ-ET-----ADVLYPATWSTEAIDA 232 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHh-cc-----ccccCcccCcHHHHHH
Confidence 4567889999999988899999999999999999999988765432 1111111 00 1123344566889999
Q ss_pred HHHhccCCCCCCCCh--HHHHH
Q 011353 289 ASRCLQYEPRERPNP--RSLVT 308 (488)
Q Consensus 289 i~~cl~~~p~~Rps~--~~il~ 308 (488)
+.+||+.+|.+||++ +++++
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HHHHccCChhHcCCccHHHHhc
Confidence 999999999999999 66554
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=297.52 Aligned_cols=241 Identities=17% Similarity=0.164 Sum_probs=190.6
Q ss_pred ccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHH-hccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAV-GQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
+.||.|+||.||+|.. .+++.||||.++..... ....+..|..++ ...+|+||+++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4679999999999994 56889999998754321 122344555544 445899999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCccccCCC
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 217 (488)
++|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..........++..
T Consensus 82 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 999999964 34689999999999999999999998 999999999999999999999999999887665555678889
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCC
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 297 (488)
|++||.+.+..++.++||||||+++|+|+||..||.................. .........+..+.+++.+||+.+|
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p 236 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN--WPEEVKEFCSPEAVDLINRLLCMDP 236 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC--CCCcccccCCHHHHHHHHHHccCCH
Confidence 99999998888899999999999999999999888654322221111111000 0111222356789999999999999
Q ss_pred CCCCChHHHHH
Q 011353 298 RERPNPRSLVT 308 (488)
Q Consensus 298 ~~Rps~~~il~ 308 (488)
++||++.++.+
T Consensus 237 ~~R~~~~~~~~ 247 (260)
T cd05611 237 AKRLGANGYQE 247 (260)
T ss_pred HHccCCCcHHH
Confidence 99997754433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=298.76 Aligned_cols=242 Identities=18% Similarity=0.248 Sum_probs=197.6
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccC---CCCcccEEEEEeeCCeeEEEEe
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~E 133 (488)
|++++.||.|+||.||+|. ..++..||+|.++... ......+.+|+.+++.++ |||++++++++......++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 5567788999999999999 4678999999987543 234567889999999996 9999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++++|.+++.. ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 83 YAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKV-GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred cCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 9999999999853 3689999999999999999999998 9999999999999999999999999998765433
Q ss_pred CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCCh-HHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS-DEGTELVR 287 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ 287 (488)
....++..|+|||.+.++ .++.++|||||||++|+|++|..||............ .... ....+. ..+.++.+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~ 233 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI-PKSK----PPRLEDNGYSKLLRE 233 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc-ccCC----CCCCCcccCCHHHHH
Confidence 233577889999998754 4688999999999999999999887543221111110 0000 111111 24568999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+||+.||++||++.+++.+
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhC
Confidence 9999999999999999999886
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=302.36 Aligned_cols=240 Identities=17% Similarity=0.235 Sum_probs=196.4
Q ss_pred ccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHH
Q 011353 63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 141 (488)
..||+|+||.||++.. .++..||||.+..........+.+|+.+++.++|+||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 4569999999999984 578899999987554444566899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----CccccCCC
Q 011353 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNLA 217 (488)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~~~~ 217 (488)
+++. .+.+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 106 ~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~-givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06657 106 DIVT---HTRMNEEQIAAVCLAVLKALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 181 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence 9884 34589999999999999999999998 9999999999999999999999999987654332 23456889
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCC
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 297 (488)
|++||.+.+..++.++|+|||||++|+|++|..||................. .... .....+..+.+++.+||+.+|
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PKLK--NLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC-cccC--CcccCCHHHHHHHHHHHhCCc
Confidence 9999999888899999999999999999999988765422211111000111 1000 112245678999999999999
Q ss_pred CCCCChHHHHHH
Q 011353 298 RERPNPRSLVTA 309 (488)
Q Consensus 298 ~~Rps~~~il~~ 309 (488)
.+||++.+++.+
T Consensus 259 ~~R~~~~~ll~~ 270 (292)
T cd06657 259 AQRATAAELLKH 270 (292)
T ss_pred ccCcCHHHHhcC
Confidence 999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=285.11 Aligned_cols=239 Identities=18% Similarity=0.168 Sum_probs=196.0
Q ss_pred ccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEee----CCeeEEEEecCC
Q 011353 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE----GDERLLVAEYMP 136 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~~~lv~E~~~ 136 (488)
+.||-|-.|.|-.+. ..+++.+|+|++... ....+|+++.-.. .|||||++++++.. ...+.+|||.|+
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me 142 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME 142 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence 457999999999998 667999999999743 3466899887777 59999999999854 345789999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC---CCCeeeecCCCccccCCC---C
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG---R 210 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~DfGla~~~~~~---~ 210 (488)
||.|.+.+.++..+.+++..+..|+.||+.|+.|||+. +|.||||||+|+|.+. +-.+||+|||+|+..... .
T Consensus 143 GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~-nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~ 221 (400)
T KOG0604|consen 143 GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM-NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM 221 (400)
T ss_pred chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc-chhhccCChhheeeecCCCCcceEecccccccccCCCcccc
Confidence 99999999988888999999999999999999999999 9999999999999964 456999999999976543 3
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC----hHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS----SDEGTELV 286 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~ 286 (488)
+..-|+.|.|||++...+|+..+|+||+||++|-|++|-+||++..-..+..+-...+... .-.|| ...+++..
T Consensus 222 TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g--qy~FP~pEWs~VSe~aK 299 (400)
T KOG0604|consen 222 TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG--QYEFPEPEWSCVSEAAK 299 (400)
T ss_pred CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc--CccCCChhHhHHHHHHH
Confidence 4456899999999999999999999999999999999999987642211111111111000 01122 35788999
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
++|+.+|..+|.+|.|+.+++++
T Consensus 300 dlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 300 DLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred HHHHHHhcCCchhheeHHHhhcC
Confidence 99999999999999999999887
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=291.26 Aligned_cols=244 Identities=18% Similarity=0.223 Sum_probs=206.1
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccH---HHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.++.+++.||+|.||.|-+++ ..+++.+|+|++++...-.. ..-+.|-++|+..+||.+..+.-.|...+.+++||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 455677888999999999999 77899999999987654332 23567889999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC----C
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----D 208 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~----~ 208 (488)
||..||.|.-+|.+ .+.+++.....+...|+.||.|||++ +||+||||.+|.|+|.+|++||+|||+++..- .
T Consensus 248 eyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~-~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t 324 (516)
T KOG0690|consen 248 EYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSR-NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDT 324 (516)
T ss_pred EEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhC-CeeeeechhhhheeccCCceEeeecccchhcccccce
Confidence 99999999998865 45699999999999999999999998 99999999999999999999999999998532 2
Q ss_pred CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 209 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
.++.+|||.|+|||++....|....|.|.+|||+|||++|+.||.....+.+-.-.... .-.+|...++++..|
T Consensus 325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e------d~kFPr~ls~eAktL 398 (516)
T KOG0690|consen 325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME------DLKFPRTLSPEAKTL 398 (516)
T ss_pred eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh------hccCCccCCHHHHHH
Confidence 35678999999999999999999999999999999999999999865433222211111 113566778899999
Q ss_pred HHHhccCCCCCCC-----ChHHHHHH
Q 011353 289 ASRCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rp-----s~~~il~~ 309 (488)
+..+|.+||.+|. .+.+|.++
T Consensus 399 LsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 399 LSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred HHHHhhcChHhhcCCCchhHHHHHhh
Confidence 9999999999995 36666655
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=314.32 Aligned_cols=239 Identities=17% Similarity=0.225 Sum_probs=193.1
Q ss_pred ccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC----CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe--eEEEEecC
Q 011353 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRS----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE--RLLVAEYM 135 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~E~~ 135 (488)
..||+|+|-+||+|. ..+|..||.-.++.. .....++|..|+.+|+.|+||||++++.+|.+... +.+|+|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 346999999999999 456888885544321 22335789999999999999999999999987765 78999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCcccccccCcceeeC-CCCCeeeecCCCccccCCC--Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG--RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~-~~~~~kl~DfGla~~~~~~--~~ 211 (488)
..|+|..|+++. +.++...+..|++||++||.|||++ +.|||||||.+||+|+ ..|.|||+|+|||...+.. .+
T Consensus 126 TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks 203 (632)
T KOG0584|consen 126 TSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS 203 (632)
T ss_pred cCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccce
Confidence 999999999763 4588899999999999999999987 5799999999999996 5689999999999876554 55
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhH-HHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..|||.|||||+.. ..|+..+|||||||+++||+|+..|+...... .+.......+.+..+ ..-..+++.+||.
T Consensus 204 vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl----~kV~dPevr~fIe 278 (632)
T KOG0584|consen 204 VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAAL----SKVKDPEVREFIE 278 (632)
T ss_pred eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHh----hccCCHHHHHHHH
Confidence 78999999999987 88999999999999999999999887543211 111111122221111 1112468999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||.. .++|||+.|+|++
T Consensus 279 kCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 279 KCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHhcC-chhccCHHHHhhC
Confidence 99999 9999999999987
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=325.96 Aligned_cols=250 Identities=16% Similarity=0.174 Sum_probs=184.5
Q ss_pred CcccccccCCCCCCCeEEEEEeCC--CCEEEEE------------------EcCCCCCccHHHHHHHHHHHhccCCCCcc
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN--QFRIAVK------------------RFNRSAWPDARQFLEEARAVGQLRNRRLA 116 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~e~~~l~~l~h~niv 116 (488)
..|+++++||+|+||+||++.... +..+++| .+.. .......+.+|+.+|..++||||+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCCcC
Confidence 578999999999999999987422 2222222 1111 111244688999999999999999
Q ss_pred cEEEEEeeCCeeEEEEecCCCCCHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC
Q 011353 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193 (488)
Q Consensus 117 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (488)
++++++.+.+..++|+|++. ++|.+++.... ........+..|+.||+.||.|||++ +||||||||+|||++.++
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~-gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK-KLIHRDIKLENIFLNCDG 304 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCC
Confidence 99999999999999999995 47887775321 11234566788999999999999998 999999999999999999
Q ss_pred CeeeecCCCccccCCCC-----ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh----HHHhh-c
Q 011353 194 NPRLSCFGLMKNSRDGR-----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRD-R 263 (488)
Q Consensus 194 ~~kl~DfGla~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~~-~ 263 (488)
.+||+|||+++...... ...||+.|+|||++.+..++.++|||||||++|||++|..+|..... ..+.. .
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~ 384 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKII 384 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence 99999999998654332 34689999999999998999999999999999999999865432110 00000 0
Q ss_pred c-----ccccccc----------c----ccCCCC-----hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 264 N-----IQTLTDS----------C----LEGQFS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 264 ~-----~~~~~~~----------~----~~~~~~-----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. ...+.+. . ....++ ...+.++.+++.+||+.||.+|||+.+++.+
T Consensus 385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 0000000 0 000000 1134567888999999999999999999987
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=303.15 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=197.6
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+|++++.||+|+||.||+|.. .+++.||||+++... ......+.+|+++++.++|+||+++++++...+..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 467788889999999999995 468899999987542 22346789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
++++.+..++.. ...+++..+..++.||+.||.|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 82 VERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 998777665543 34589999999999999999999998 99999999999999999999999999987654432
Q ss_pred -ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHH-Hhh-c------------------ccc--
Q 011353 211 -SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRD-R------------------NIQ-- 266 (488)
Q Consensus 211 -~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~-~------------------~~~-- 266 (488)
...++..|+|||++.+. .++.++||||||+++|+|++|+.||....... ... . ...
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 34567889999999887 78999999999999999999998776432110 000 0 000
Q ss_pred ccccc----cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 267 TLTDS----CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 267 ~~~~~----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... .....++...+.++.+|+.+||..+|++|||+++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 00001222346889999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-38 Score=293.34 Aligned_cols=246 Identities=18% Similarity=0.242 Sum_probs=202.9
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
|.+.+.||.|++|.||++.. .++..+++|++..........+.+|+.+++.++|+||+++++++......++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 55667789999999999995 46889999999876544567799999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---Ccccc
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYST 214 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~~~~ 214 (488)
++|.+++.... ..+++..+..++.|++.+|.|||+. +++|+||+|+||+++.++.++|+|||.+...... ....+
T Consensus 82 ~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 159 (253)
T cd05122 82 GSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG 159 (253)
T ss_pred CcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC-CEecCCCCHHHEEEccCCeEEEeeccccccccccccccceec
Confidence 99999986532 4689999999999999999999998 9999999999999999999999999998876554 34567
Q ss_pred CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 215 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
+..|++||.+.+...+.++||||||+++++|++|+.|+.................... ..+...+..+.+++.+||+
T Consensus 160 ~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~ 236 (253)
T cd05122 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGL---RNPEKWSDEFKDFLKKCLQ 236 (253)
T ss_pred CCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCc---CcccccCHHHHHHHHHHcc
Confidence 8899999999988899999999999999999999988765421111111100000000 0111125789999999999
Q ss_pred CCCCCCCChHHHHHH
Q 011353 295 YEPRERPNPRSLVTA 309 (488)
Q Consensus 295 ~~p~~Rps~~~il~~ 309 (488)
.||++|||+.+++.+
T Consensus 237 ~~p~~R~t~~~~l~~ 251 (253)
T cd05122 237 KNPEKRPTAEQLLKH 251 (253)
T ss_pred CChhhCCCHHHHhcC
Confidence 999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=297.19 Aligned_cols=244 Identities=19% Similarity=0.280 Sum_probs=202.8
Q ss_pred cccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
++++++.||.|++|.||++... +++.|+||++..... .....+.+|+..+..++|+||+++++++...+..++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 4566778899999999999954 589999999876543 33567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
++++|.+++... ..+++..++.++.|++.||.|||+ . +++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 82 DGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 999999999653 568999999999999999999999 8 99999999999999999999999999987654432
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh---hHHHhhccccccccccccCCCChH-HHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQTLTDSCLEGQFSSD-EGTELV 286 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 286 (488)
...++..|+|||.+.+..++.++||||||+++|+|+||+.|+.... ....... +.... ....+.. .+..+.
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~l~ 233 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA----ICDGP-PPSLPAEEFSPEFR 233 (264)
T ss_pred ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH----HhcCC-CCCCCcccCCHHHH
Confidence 3356788999999998889999999999999999999998875442 1111111 11111 1112223 567899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++..||..+|++|||+.+++++
T Consensus 234 ~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 234 DFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHccCChhhCCCHHHHHhC
Confidence 99999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=297.49 Aligned_cols=248 Identities=20% Similarity=0.303 Sum_probs=194.2
Q ss_pred cccccCCCCCCCeEEEEEeC----CCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCC------e
Q 011353 60 NIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 127 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 127 (488)
.+.+.||+|+||.||+|... ++..||||++..... ...+++.+|+.+++.++||||+++++++.... .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 45567899999999999842 368899999875432 23556889999999999999999999886542 2
Q ss_pred eEEEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 128 RLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
.++++||+++|+|.+++... ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK-NFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccchhhEEEcCCCCEEECccccc
Confidence 47899999999999887421 122478899999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCC
Q 011353 204 KNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (488)
Q Consensus 204 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
+...... ...+++.|++||.+.+..++.++|||||||++|+|++ |+.|+............... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~ 235 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-----NRLK 235 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-----CcCC
Confidence 8654321 2223567999999998889999999999999999999 77666543222111111000 0011
Q ss_pred CChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1233557899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=300.20 Aligned_cols=239 Identities=18% Similarity=0.181 Sum_probs=188.0
Q ss_pred CCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhc---cCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQ---LRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~---l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
||+|+||.||++.. .+++.+|+|.+...... ....+.+|..++.. .+||||+.+++++...+..++||||+++
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG 81 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence 69999999999994 56889999998654321 12234455544443 4799999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--CccccC
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN 215 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~~~~~ 215 (488)
|+|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||||+|||++.++.++|+|||++...... ....++
T Consensus 82 ~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (279)
T cd05633 82 GDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (279)
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence 999999864 34699999999999999999999998 9999999999999999999999999998754332 234578
Q ss_pred CCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhcc
Q 011353 216 LAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (488)
Q Consensus 216 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (488)
..|+|||.+.+ ..++.++|||||||++|+|++|..||.......... ..... .......+...+.++.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMT-LTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--HHHHh-hcCCcCCccccCHHHHHHHHHHhc
Confidence 99999999874 458899999999999999999999886432110000 00000 001112344467789999999999
Q ss_pred CCCCCCC-----ChHHHHHH
Q 011353 295 YEPRERP-----NPRSLVTA 309 (488)
Q Consensus 295 ~~p~~Rp-----s~~~il~~ 309 (488)
.||.+|| |+.++++|
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhC
Confidence 9999999 59999887
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=305.32 Aligned_cols=249 Identities=17% Similarity=0.202 Sum_probs=192.3
Q ss_pred CCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHh
Q 011353 66 GEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (488)
Q Consensus 66 G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~ 142 (488)
|.|+||+||++.. .+++.||||++...... ..+.+.+|+.+++.++||||++++++|...+..++||||+.+++|.+
T Consensus 9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~ 88 (328)
T cd08226 9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANS 88 (328)
T ss_pred cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHH
Confidence 4459999999994 57899999998754322 24568899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----------Cc
Q 011353 143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----------RS 211 (488)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----------~~ 211 (488)
++.......+++..+..++.|++.||.|||+. +++||||||+|||++.++.++++||+.+...... ..
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (328)
T cd08226 89 LLKTYFPEGMSEALIGNILFGALRGLNYLHQN-GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQF 167 (328)
T ss_pred HHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccccccc
Confidence 99765445689999999999999999999998 9999999999999999999999999854322110 11
Q ss_pred cccCCCCCCccccccC--CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccc-----------------------
Q 011353 212 YSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ----------------------- 266 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~----------------------- 266 (488)
..++..|+|||++.+. .++.++|||||||++|+|++|..||..............
T Consensus 168 ~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (328)
T cd08226 168 STSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQ 247 (328)
T ss_pred ccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccch
Confidence 1235679999999764 478899999999999999999988764321111000000
Q ss_pred ------------------ccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhhhc
Q 011353 267 ------------------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQK 315 (488)
Q Consensus 267 ------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~~ 315 (488)
...........+...+..+.+|+.+||+.||++|||+.+++++ +..+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~ 316 (328)
T cd08226 248 SGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE 316 (328)
T ss_pred hhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence 0000001111123456789999999999999999999999987 444444
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=296.12 Aligned_cols=238 Identities=16% Similarity=0.183 Sum_probs=195.8
Q ss_pred CCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
||.|++|.||++.. .++..||+|++..... .....+.+|+.+++.++||||+++++.+.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 59999999999995 4588999999875432 2345689999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---CccccCCC
Q 011353 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA 217 (488)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~~~~~~~ 217 (488)
.+++.+ ...+++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~-~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRD--RGLFDEYTARFYIACVVLAFEYLHNR-GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999965 34589999999999999999999998 9999999999999999999999999998876543 23456889
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh--hHHHhhccccccccccccCCCChHHHHHHHHHHHHhccC
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (488)
|++||.+.+..++.++|+||||+++|+|++|..|+.... ...... ..........++...+..+.+++.+||+.
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 233 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYN----DILKGNGKLEFPNYIDKAAKDLIKQLLRR 233 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHH----HHhccCCCCCCCcccCHHHHHHHHHHccC
Confidence 999999988889999999999999999999998876543 111111 11111112223344467899999999999
Q ss_pred CCCCCCC-----hHHHHHH
Q 011353 296 EPRERPN-----PRSLVTA 309 (488)
Q Consensus 296 ~p~~Rps-----~~~il~~ 309 (488)
+|++||+ +.+++++
T Consensus 234 ~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 234 NPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred ChhhCcCCcccCHHHHhcC
Confidence 9999999 6777664
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=307.45 Aligned_cols=250 Identities=19% Similarity=0.276 Sum_probs=213.7
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 53 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
.+.+..|.+++.||+|.|+.|.++. ..++..||||.+++.... ....+.+|+++|..|.|||||+++.+......+|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 3556778899999999999999999 456899999999876433 3455889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+.+|.+.++|.++ +.+.+..+..++.|+..+++|||++ +|||||||++||||+.+.++||+|||++..+...
T Consensus 132 lV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k-~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSK-NIVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhc-ceeccccchhhcccccccceeeeccccceeeccc
Confidence 999999999999999763 4467788999999999999999999 9999999999999999999999999999877644
Q ss_pred ---CccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
.+.+|++.|.|||++.+..+ .+.+|+||+|++||-|+.|..||.+..........+.... .++.-.+.+.
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~------rIp~~ms~dc 282 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY------RIPFYMSCDC 282 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee------cccceeechh
Confidence 56789999999999998775 6799999999999999999999987655444333322211 2333456789
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.+++.++|-.+|.+|++..++..+-+
T Consensus 283 e~lLrk~lvl~Pskr~~~dqim~~~W 308 (596)
T KOG0586|consen 283 EDLLRKFLVLNPSKRGPCDQIMKDRW 308 (596)
T ss_pred HHHHHHhhccCccccCCHHHhhhhcc
Confidence 99999999999999999999998844
|
|
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=299.49 Aligned_cols=250 Identities=17% Similarity=0.186 Sum_probs=192.9
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc-HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
..|.+++.||+|+||.||+|. ..++..||+|++....... ...+.+|+.+++.++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 356778889999999999998 4568899999987543222 34678899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+. ++|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++..... .
T Consensus 85 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 161 (291)
T cd07870 85 MH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQ-HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS 161 (291)
T ss_pred cc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence 96 5787777543 24578888999999999999999998 9999999999999999999999999998754322 2
Q ss_pred ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhH--HHhhc----------------cccccccc
Q 011353 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALD--LIRDR----------------NIQTLTDS 271 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~--~~~~~----------------~~~~~~~~ 271 (488)
...+++.|+|||++.+. .++.++|||||||++|+|+||..||...... .+... ........
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07870 162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE 241 (291)
T ss_pred CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence 23457899999998764 4788999999999999999999887542211 00000 00000000
Q ss_pred cccCCCC---------hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 CLEGQFS---------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 ~~~~~~~---------~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
......+ ...+..+.+++.+|+..||.+|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000 0124678999999999999999999998865
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=261.09 Aligned_cols=249 Identities=18% Similarity=0.252 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.|..+++||+|.||+||+++ +++++.||+|.++.+.. +-....++|+-+|+.++|.|||+++++...+..+-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 35566788999999999999 77799999999875432 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
|.. +|..++.. -++.++...+..++.|+++||.|+|+. +++|||+||.|.||+.+|.+|++|||+++-+.-. +
T Consensus 83 cdq-dlkkyfds-lng~~d~~~~rsfmlqllrgl~fchsh-nvlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 83 CDQ-DLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSH-NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred hhH-HHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 965 78888865 346699999999999999999999998 9999999999999999999999999999876544 3
Q ss_pred ccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhc--------------ccccccccccc
Q 011353 211 SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDR--------------NIQTLTDSCLE 274 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~--------------~~~~~~~~~~~ 274 (488)
....|..|++|.++.|.+ |+++.|+||.||++.|+.. |++.|++...+..... .+..+.+...-
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y 239 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY 239 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence 445689999999999866 8999999999999999987 5555666533221111 12222222222
Q ss_pred CCCC---------hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 275 GQFS---------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 275 ~~~~---------~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..++ +.....-.+++.+.|..+|.+|.++++.+++
T Consensus 240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 2222 2233456889999999999999999998876
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=339.27 Aligned_cols=239 Identities=18% Similarity=0.209 Sum_probs=199.2
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
.+|.|.||.||.|. .++|...|+|-++..... ....+.+|..+|..+.|||+|+++|+-.+.+.++|.||||.+|+|
T Consensus 1242 ~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsL 1321 (1509)
T KOG4645|consen 1242 FIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSL 1321 (1509)
T ss_pred ccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcH
Confidence 34999999999999 778999999998754322 244578899999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC--------cc
Q 011353 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--------SY 212 (488)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~--------~~ 212 (488)
.+.+.. ++..++.....+..|++.|+.|||+. |||||||||.||+++.+|.+|++|||.|....... ..
T Consensus 1322 a~ll~~--gri~dE~vt~vyt~qll~gla~LH~~-gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~ 1398 (1509)
T KOG4645|consen 1322 ASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEH-GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSM 1398 (1509)
T ss_pred HHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhc-CceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhh
Confidence 999965 44577788888999999999999998 99999999999999999999999999998765442 45
Q ss_pred ccCCCCCCccccccCC---CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
.||+.|||||++.+.. ...+.||||+|||++||+||+.|+..-..++. +.--+...-.+.+|...+.+-.+|+
T Consensus 1399 ~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a----IMy~V~~gh~Pq~P~~ls~~g~dFl 1474 (1509)
T KOG4645|consen 1399 MGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA----IMYHVAAGHKPQIPERLSSEGRDFL 1474 (1509)
T ss_pred cCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH----HHhHHhccCCCCCchhhhHhHHHHH
Confidence 7899999999998644 55689999999999999999998753221111 1111112223456667889999999
Q ss_pred HHhccCCCCCCCChHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~ 309 (488)
.+||..||.+|.++.+++++
T Consensus 1475 e~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1475 EHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HHHHhcCchhhhHHHHHHHh
Confidence 99999999999999988887
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=299.57 Aligned_cols=249 Identities=18% Similarity=0.240 Sum_probs=195.6
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|++++.||.|++|.||+|.. .+|..||+|++..... .....+.+|+.+++.++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 45677889999999999994 5789999999875432 22356889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
+ ++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~-~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 5 6899998754444689999999999999999999998 9999999999999999999999999998754322 22
Q ss_pred cccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc--------------cccccc------
Q 011353 212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------IQTLTD------ 270 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--------------~~~~~~------ 270 (488)
..++..|+|||++.+. .++.++||||||+++|+|++|+.||............ ...+.+
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 3457889999988764 4788999999999999999999887543211000000 000000
Q ss_pred c---cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 S---CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 ~---~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. ..........+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 00001122345789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=299.87 Aligned_cols=251 Identities=19% Similarity=0.212 Sum_probs=195.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.+|++++.||.|++|.||+|.. .+++.||+|.+..... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 4677888999999999999994 5688999999865432 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-CCCeeeecCCCccccCCC---
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~DfGla~~~~~~--- 209 (488)
|++ ++|.+++.......+++..+..++.||+.||.|||++ +++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 996 4888888654444568889999999999999999998 9999999999999985 567999999998754322
Q ss_pred -CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-------cccc-------cc---
Q 011353 210 -RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------IQTL-------TD--- 270 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------~~~~-------~~--- 270 (488)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.||............ .... .+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 233557899999998764 4788999999999999999999887543211000000 0000 00
Q ss_pred c--cccC----CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 S--CLEG----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 ~--~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. .... ...+..+..+.+++.+||+.+|++||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0000 0112345778999999999999999999999986
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-38 Score=297.43 Aligned_cols=247 Identities=18% Similarity=0.211 Sum_probs=191.7
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccC-CCCcccEEEEEeeC--CeeEEEEe
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEG--DERLLVAE 133 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~E 133 (488)
|++++.+|+|+||.||+|. ..++..||+|+++.... .......+|+.++.++. |+||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 4577889999999999999 45688999999875422 22334567899999985 99999999999987 88999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---C
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R 210 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~ 210 (488)
|+++ +|.+++... ...+++..+..++.|++.||.|||+. +++|+||+|+||+++. +.+||+|||+++..... .
T Consensus 81 ~~~~-~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMDM-NLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRN-GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCCc-cHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 9974 888888643 34689999999999999999999998 9999999999999999 99999999998765432 2
Q ss_pred ccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHH-h---h---cccc---------ccccccc
Q 011353 211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-R---D---RNIQ---------TLTDSCL 273 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~---~---~~~~---------~~~~~~~ 273 (488)
...++..|+|||++.+ ..++.++|||||||++|||++|..||+....... . . .... .......
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 3456889999997754 4578899999999999999999988865321110 0 0 0000 0000000
Q ss_pred cC-------CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 274 EG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 274 ~~-------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.. ......+..+.+++.+||+.+|++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 0012346889999999999999999999999876
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-38 Score=301.23 Aligned_cols=252 Identities=20% Similarity=0.240 Sum_probs=195.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 129 (488)
+...|++++.||.|+||.||+|.. .+|..||+|.++..... ....+.+|+.++++++|+||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 456788888899999999999994 56899999998744322 133467899999999999999999998755 5689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+.+ +|.+++... ...+++..+..++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~~-~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHEN-FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 99999965 898888653 35689999999999999999999998 9999999999999999999999999998865433
Q ss_pred ----CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc-------cccc----c---
Q 011353 210 ----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------QTLT----D--- 270 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------~~~~----~--- 270 (488)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||............. .... .
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07845 162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL 241 (309)
T ss_pred cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence 12234678999999876 457899999999999999999998876432211110000 0000 0
Q ss_pred --c-ccc-CCC------ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 --S-CLE-GQF------SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 --~-~~~-~~~------~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. ... ... ....++.+.++|.+||+.||++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 000 000 01136778999999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=306.63 Aligned_cols=247 Identities=15% Similarity=0.205 Sum_probs=194.7
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeC------Ce
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 127 (488)
..|++++.||+|+||.||++. ..+++.||||.+.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 467788888999999999999 4578999999986432 22345678899999999999999999988643 35
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+.+ +|.+.+.. .+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 96 VYLVMELMDA-NLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred EEEEEeccCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 7999999965 88888843 288999999999999999999998 99999999999999999999999999998654
Q ss_pred CCC---ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc------------------c--
Q 011353 208 DGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR------------------N-- 264 (488)
Q Consensus 208 ~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~------------------~-- 264 (488)
... ...++..|+|||.+.+..++.++|||||||++|+|++|+.||........... .
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 432 23567889999999998999999999999999999999988864321000000 0
Q ss_pred -------------ccccccccc----cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 265 -------------IQTLTDSCL----EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 265 -------------~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+..+..... ....+...+..+.+++.+||+.||++|||+.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 000012346678999999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=298.70 Aligned_cols=244 Identities=19% Similarity=0.217 Sum_probs=195.7
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+..+.+||.|+||+||+|.. .++..|++|++...... ....+.+|+.+++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 34456689999999999994 56889999998754322 234688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcccc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST 214 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 214 (488)
+. |+|.+++... ..++++..+..++.||+.+|.|||+. |++|+||+|+||+++.++.++|+|||++..........+
T Consensus 103 ~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~ 179 (313)
T cd06633 103 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG 179 (313)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence 96 4788877542 35689999999999999999999998 999999999999999999999999999876655556678
Q ss_pred CCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 215 ~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
+..|+|||++. ...++.++|||||||++|+|++|..|+................. ........+..+.+++.+
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~ 255 (313)
T cd06633 180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS----PTLQSNEWTDSFRGFVDY 255 (313)
T ss_pred cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC----CCCCccccCHHHHHHHHH
Confidence 88999999984 35688899999999999999999988765321111111100000 111122244679999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||+.+|.+||++.+++.+
T Consensus 256 ~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 256 CLQKIPQERPASAELLRH 273 (313)
T ss_pred HccCChhhCcCHHHHhcC
Confidence 999999999999999976
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=299.11 Aligned_cols=246 Identities=19% Similarity=0.216 Sum_probs=197.7
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
|..++.||.|+||.||+|. ..++..||+|.+..... ....++.+|+.+++.++|+|++++++++......++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 4556778999999999999 45688999999864321 2245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcccc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST 214 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 214 (488)
+. |+|.+.+... ..++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..........+
T Consensus 97 ~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (308)
T cd06634 97 CL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVG 173 (308)
T ss_pred cC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHhEEECCCCcEEECCcccceeecCcccccC
Confidence 96 5888877542 34689999999999999999999998 999999999999999999999999999887766666678
Q ss_pred CCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 215 ~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
++.|+|||++. ...++.++|||||||++|+|++|..|+................. ........+..+.+++.+
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~ 249 (308)
T cd06634 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES----PALQSGHWSEYFRNFVDS 249 (308)
T ss_pred CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC----CCcCcccccHHHHHHHHH
Confidence 89999999975 34578899999999999999999988754321111110111000 111122356779999999
Q ss_pred hccCCCCCCCChHHHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~ 311 (488)
||+.+|++||++.+++.+..
T Consensus 250 cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 250 CLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred HhhCCcccCCCHHHHhhCcc
Confidence 99999999999999998844
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=291.19 Aligned_cols=245 Identities=20% Similarity=0.244 Sum_probs=204.3
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|.+++.||.|+||.||++.. .++..|++|++..... .....+.+|+++++.++|||++++++.+......++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 56777889999999999995 4688999999976543 34567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC---
Q 011353 136 PNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~--- 210 (488)
++++|.+++.... ...+++..+..++.+++.||.|||+. |++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 9999999997532 36699999999999999999999998 99999999999999999999999999987654432
Q ss_pred -ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+++.|+|||.+.+..++.++||||+|+++++|++|+.|+................ ....+...+..+.+++
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i 235 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-----YPPIPSQYSSELRNLV 235 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-----CCCCCCCCCHHHHHHH
Confidence 2356788999999998889999999999999999999998876543222222111111 1122334567899999
Q ss_pred HHhccCCCCCCCChHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~ 309 (488)
.+||..+|++|||+.+++++
T Consensus 236 ~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 236 SSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHcCCChhhCcCHHHHhcC
Confidence 99999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=290.92 Aligned_cols=245 Identities=18% Similarity=0.224 Sum_probs=201.9
Q ss_pred ccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeEEEEe
Q 011353 59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE 133 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~E 133 (488)
|.+.+.||.|++|.||+|... ++..|++|++..... ...+.+.+|+.++++++||||+++++.+.+. ...++|+|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 345566799999999999954 788999999876542 3356789999999999999999999999988 88999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC---
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~--- 210 (488)
|+++++|.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~-~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 158 (260)
T cd06606 82 YVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSN-GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE 158 (260)
T ss_pred ecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence 99999999999753 3799999999999999999999998 99999999999999999999999999987655432
Q ss_pred ---ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 211 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
...++..|++||.+.+...+.++||||||+++++|++|..||.......... ..+.........+...+..+.+
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T cd06606 159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAAL---YKIGSSGEPPEIPEHLSEEAKD 235 (260)
T ss_pred cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH---HhccccCCCcCCCcccCHHHHH
Confidence 3456789999999998889999999999999999999998876543111100 0111111112234445788999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+||..+|.+||++.+++++
T Consensus 236 ~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 236 FLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHHhCcCChhhCCCHHHHhhC
Confidence 9999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-38 Score=297.61 Aligned_cols=249 Identities=17% Similarity=0.245 Sum_probs=196.2
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
|++++.||.|++|.||+|.. .++..||||+++..... ....+.+|+.+++.++|+||+++++++.+.+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 56778889999999999995 56889999999765332 34567889999999999999999999999999999999998
Q ss_pred CCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 137 NDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 137 ~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
+ +|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++...... ..
T Consensus 82 ~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 82 K-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred c-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 5 8988886533 24689999999999999999999998 9999999999999999999999999998754332 23
Q ss_pred cccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc-----------ccccc-ccccC---
Q 011353 212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-----------QTLTD-SCLEG--- 275 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-----------~~~~~-~~~~~--- 275 (488)
..++..|++||++.+. .++.++|||||||++|+|++|+.||............. ..+.. .....
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 4467889999998764 47889999999999999999998876432211110000 00000 00000
Q ss_pred --------CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 276 --------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 276 --------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+..+..+.+++.+||+.||.+||++.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0112345778999999999999999999999865
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=298.50 Aligned_cols=250 Identities=16% Similarity=0.168 Sum_probs=192.7
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCe-----e
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDE-----R 128 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~-----~ 128 (488)
.|++++.||.|+||.||+|.. .+++.||||.++.... .....+.+|+.+++.++ ||||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 456777889999999999994 5689999999865432 22456889999999995 6999999999987665 8
Q ss_pred EEEEecCCCCCHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-CCCeeeecCCCcc
Q 011353 129 LLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMK 204 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~DfGla~ 204 (488)
++||||+++ +|.+++.... ...+++..+..++.||+.||.|||+. +++||||||+||+++. ++.+||+|||++.
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEecCCCeEEEeecccce
Confidence 999999986 7988886432 24689999999999999999999998 9999999999999998 8999999999987
Q ss_pred ccCCC----CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc--------c---cccc
Q 011353 205 NSRDG----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR--------N---IQTL 268 (488)
Q Consensus 205 ~~~~~----~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--------~---~~~~ 268 (488)
..... ....+++.|+|||++.+ ..++.++||||||+++|+|++|..||........... . ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 54322 22345788999998875 4478999999999999999999988765321110000 0 0000
Q ss_pred cc-----------ccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 TD-----------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 ~~-----------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.. ........+..+..+.++|.+||..+|.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 000000112356779999999999999999999999876
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=291.64 Aligned_cols=244 Identities=16% Similarity=0.189 Sum_probs=196.5
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC-----CccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 129 (488)
.|++.+.||+|+||.||++. ..++..||+|.+.... ......+.+|+.+++.++|+||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 45667778999999999999 4568999999875321 12245688999999999999999999998764 4588
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+|+||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++.....
T Consensus 83 ~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 83 IFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 99999999999999864 34588999999999999999999998 9999999999999999999999999998754321
Q ss_pred -------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 210 -------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
....++..|+|||++.+..++.++|||||||++++|++|+.||......... ............+...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~p~~~~ 235 (264)
T cd06653 160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAI----FKIATQPTKPMLPDGVS 235 (264)
T ss_pred cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHH----HHHHcCCCCCCCCcccC
Confidence 2245688999999999888999999999999999999999887543211111 11111111223455667
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+.+++.+||+ +|..||++.+++.|
T Consensus 236 ~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 236 DACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 889999999999 57999999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=301.22 Aligned_cols=249 Identities=16% Similarity=0.216 Sum_probs=192.7
Q ss_pred ccccccCCCCCCCeEEEEEe-C--CCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-E--NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 130 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 130 (488)
|++++.||+|+||.||+|.. . ++..||||.+.... ......+.+|+.++..++||||+++++++.+. ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 56778899999999999995 4 57899999998633 23345678899999999999999999999988 78999
Q ss_pred EEecCCCCCHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC----CCCeeeecCCCc
Q 011353 131 VAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGLM 203 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~DfGla 203 (488)
||||+++ +|.+++... ....+++..++.++.||+.||.|||+. +++||||||+||+++. ++.+||+|||++
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN-WVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999975 677766432 223689999999999999999999998 9999999999999998 999999999998
Q ss_pred cccCCC-------CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHH----------Hh----
Q 011353 204 KNSRDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----------IR---- 261 (488)
Q Consensus 204 ~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----------~~---- 261 (488)
...... ....++..|+|||++.+. .++.++|||||||++++|++|+.||.....+. +.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 865432 123457889999988764 47899999999999999999998875432111 00
Q ss_pred ---------------hccccccccccccCCCC---------h--HHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 262 ---------------DRNIQTLTDSCLEGQFS---------S--DEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 262 ---------------~~~~~~~~~~~~~~~~~---------~--~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
........+......++ . ..+..+.+++.+||+.||++|||+.+++.+
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00000000000000111 0 234678999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=296.29 Aligned_cols=248 Identities=21% Similarity=0.239 Sum_probs=195.3
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeEEEEe
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE 133 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~E 133 (488)
|++++.||.|+||.||+|.. .++..+|+|++.... ......+.+|+.+++.++|+|++++++++.+. +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 45778889999999999995 458899999998653 23345688999999999999999999999888 88999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC---
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~--- 210 (488)
|+++ +|.+++... ...+++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~-~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMDH-DLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred cccc-cHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 9975 899988653 24689999999999999999999998 99999999999999999999999999987655432
Q ss_pred --ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-----------cccccc------
Q 011353 211 --SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------IQTLTD------ 270 (488)
Q Consensus 211 --~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~~~~~~------ 270 (488)
...++..|+|||.+.+. .++.++||||||+++|||+||+.||............ +.....
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 23457789999987753 5789999999999999999999887643321111000 000000
Q ss_pred --------ccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 --------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 --------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
......+...++..+.+++.+||+.+|.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000111126789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=288.75 Aligned_cols=243 Identities=19% Similarity=0.275 Sum_probs=201.8
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|.+.+.||.|++|.||++.. .++..|++|.+..... .....+.+|++++..++|+|++++++++.+.+..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 56677889999999999984 4678999999986654 34567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc----
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---- 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~---- 211 (488)
++++|.+++... ..+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++........
T Consensus 82 ~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (254)
T cd06627 82 ENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS 158 (254)
T ss_pred CCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence 999999999653 5689999999999999999999998 999999999999999999999999999887654332
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..++..|+|||...+...+.++||||||+++++|++|..|+.............. ......+...+..+.+++.+
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~ 233 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ-----DDHPPLPEGISPELKDFLMQ 233 (254)
T ss_pred cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-----cCCCCCCCCCCHHHHHHHHH
Confidence 3567889999999887789999999999999999999988754321111100000 11122334456789999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||..+|++|||+.+++.+
T Consensus 234 ~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 234 CFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHhCChhhCcCHHHHhcC
Confidence 999999999999998864
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-38 Score=305.24 Aligned_cols=252 Identities=17% Similarity=0.255 Sum_probs=194.2
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeC-----CeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~l 130 (488)
+|.+++.||+|+||.||+|. ..++..||||.++.... .....+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEE
Confidence 56778888999999999998 56789999999864322 2345688899999999999999999987654 35799
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
|+||+.+ +|.+++. .+.+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 86 v~e~~~~-~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 86 VQELMET-DLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred Eehhccc-CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 9999965 8888874 35699999999999999999999998 9999999999999999999999999998764332
Q ss_pred ------CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh--------h---ccccc----
Q 011353 210 ------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR--------D---RNIQT---- 267 (488)
Q Consensus 210 ------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--------~---~~~~~---- 267 (488)
....++..|+|||++.+ ..++.++|||||||++|+|++|+.||......... . .....
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence 12356788999998765 45889999999999999999999888643211000 0 00000
Q ss_pred ----cccccc-cCC-----CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhhh
Q 011353 268 ----LTDSCL-EGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ 314 (488)
Q Consensus 268 ----~~~~~~-~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~ 314 (488)
...... ... ..+..+..+.+++.+||+.+|++|||+.+++++ ++...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 000000 000 011235679999999999999999999999998 55443
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=340.13 Aligned_cols=250 Identities=25% Similarity=0.427 Sum_probs=198.8
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..+...+ .||+|+||.||+|.. .++..||||++...... ...|+..+++++|||||+++++|.+.+..++||
T Consensus 690 ~~~~~~~---~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 690 SSLKEEN---VISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hhCCccc---EEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 3444444 459999999999994 67899999998754322 235688999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh---cCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT---SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
||+++|+|.++++ .++|..+.+++.||+.||.||| +. +++||||||+||+++.++.+++. ||........
T Consensus 763 Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~ 835 (968)
T PLN00113 763 EYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD 835 (968)
T ss_pred eCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCC-CeecCCCCHHhEEECCCCceEEE-eccccccccC
Confidence 9999999999994 2899999999999999999999 55 89999999999999998888876 6665544444
Q ss_pred CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh------hHHHh----hccccccccccccC--CC
Q 011353 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA------LDLIR----DRNIQTLTDSCLEG--QF 277 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~------~~~~~----~~~~~~~~~~~~~~--~~ 277 (488)
....+++.|+|||++.+..++.++|||||||++|||+||+.|+.... ..... ......+.++.... ..
T Consensus 836 ~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (968)
T PLN00113 836 TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSV 915 (968)
T ss_pred CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCc
Confidence 44567899999999998899999999999999999999998874321 11110 11122223332222 22
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+.....++.+++.+||+.+|++|||+.++++.|+.+.+..
T Consensus 916 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 916 NQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred cHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 3455667899999999999999999999999999887654
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=296.65 Aligned_cols=247 Identities=13% Similarity=0.070 Sum_probs=182.4
Q ss_pred CcccccccCCCCCCCeEEEEEeCC----CCEEEEEEcCCCCCccH-----------HHHHHHHHHHhccCCCCcccEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDA-----------RQFLEEARAVGQLRNRRLANLLGC 121 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~l~~~ 121 (488)
..|.+.+.||+|+||.||+|...+ +..+|+|+......... .....+...+..++|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 367888899999999999999543 45667776543321110 112233445666789999999997
Q ss_pred EeeCC----eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeee
Q 011353 122 CCEGD----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (488)
Q Consensus 122 ~~~~~----~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 197 (488)
+.... ..++++|++.. ++.+.+.. ....++..+..++.|++.||.|||++ +++||||||+|||++.++.++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEH-GISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCcEEE
Confidence 76543 34788888744 67776643 23367888999999999999999998 9999999999999999999999
Q ss_pred ecCCCccccCCC-----------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh-H-HHh---
Q 011353 198 SCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-D-LIR--- 261 (488)
Q Consensus 198 ~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~-~~~--- 261 (488)
+|||+++..... ....||+.|+|||++.+..++.++|||||||+++||++|+.||..... . ...
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 999998754211 123578999999999998999999999999999999999988864411 1 010
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 262 DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
......+.... ......+..+.+++..||+.+|++||++.++++.|
T Consensus 248 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 248 CDFIKRLHEGK---IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHHhhhhh---hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 00011111110 01223467899999999999999999999999876
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=283.75 Aligned_cols=253 Identities=15% Similarity=0.206 Sum_probs=196.0
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCC----CCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEee-CCe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LEN----QFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE-GDE 127 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~----~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 127 (488)
...|++++.||+|+||.||+|. .++ ...+|||.++..... -.....+|+.+++.++||||+.+..+|.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 3478899999999999999996 322 237899999865322 23457899999999999999999999977 778
Q ss_pred eEEEEecCCCCCHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC----CCeeeecC
Q 011353 128 RLLVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLSCF 200 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~----~~~kl~Df 200 (488)
+++++||.+. +|...|+.+ +.+.++...+..|++||+.|+.|||++ =|+||||||.|||+..+ |.|||+||
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N-WvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN-WVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh-heeeccCCcceEEEeccCCccCeeEeecc
Confidence 9999999987 799988642 234689999999999999999999998 89999999999999777 99999999
Q ss_pred CCccccCCC-------CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh----------
Q 011353 201 GLMKNSRDG-------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---------- 262 (488)
Q Consensus 201 Gla~~~~~~-------~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---------- 262 (488)
|+++...+. ...+.|+.|+|||.+.|.. ||.+.|||+.|||..||+|-++.|.+...+....
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r 260 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR 260 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence 999986653 2345689999999999865 9999999999999999999987765432111000
Q ss_pred ----------cccc---ccccc------cccCCC-C----------hHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 263 ----------RNIQ---TLTDS------CLEGQF-S----------SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 263 ----------~~~~---~~~~~------~~~~~~-~----------~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
..+. .+++. ...... + ..-++...+|+.++|..||-+|.|+.+.+++.
T Consensus 261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 0000 00000 000000 0 00124488999999999999999999999884
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=290.95 Aligned_cols=245 Identities=16% Similarity=0.238 Sum_probs=202.9
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|++++.+|.|+||.||++. ..++..+++|.+..... .....+.+|+.+++.++|+||+++++++.+....++||||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 5677888999999999998 45788999999875432 23456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--Cc
Q 011353 136 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~ 211 (488)
++++|.+++.+. ....+++..++.++.|++.||.|||+. |++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~-~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 999999998652 134689999999999999999999998 9999999999999999999999999998765443 22
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..++..|++||.+.+..++.++|+||||+++|+|++|+.||............... .....+...+.++.+++.+
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-----KYPPIPPIYSQDLQNFIRS 235 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----CCCCCchhhCHHHHHHHHH
Confidence 34678999999999888999999999999999999999887654332222111111 1112333567789999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||+.+|++|||+.+++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 236 MLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HcCCCcccCCCHHHHhcC
Confidence 999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=324.86 Aligned_cols=253 Identities=18% Similarity=0.155 Sum_probs=207.8
Q ss_pred HHHHhcCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC---CCccHHHHHHHHHHHhccCCCCcccEEEEEee
Q 011353 49 LRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124 (488)
Q Consensus 49 ~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 124 (488)
+....-+-.+|.+++.||+|+||.|..++ ..+++.+|+|++++. ...+..-|..|-.+|..-+.+.|++++-.|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 33334455678899999999999999999 567889999999862 22344568999999999999999999999999
Q ss_pred CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 125 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
..++|+||||++||+|-.++.+.. ++++..+..++..|..||.-||+. |+|||||||+|||||..|++||+|||.+-
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEecccCcEeeccchhHH
Confidence 999999999999999999997644 699999999999999999999999 99999999999999999999999999877
Q ss_pred ccC-CC----CccccCCCCCCccccc----c-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccccccccc
Q 011353 205 NSR-DG----RSYSTNLAFTPPEYLR----T-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 205 ~~~-~~----~~~~~~~~y~aPE~~~----~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
.+. ++ ...+|||.|++||++. + +.|+..+|.||+||++|||+.|..||+.+..-......+ +..-.
T Consensus 224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm----~hk~~ 299 (1317)
T KOG0612|consen 224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIM----NHKES 299 (1317)
T ss_pred hcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHh----chhhh
Confidence 665 33 3457999999999996 2 569999999999999999999999998764432222111 11111
Q ss_pred CCCC--hHHHHHHHHHHHHhccCCCCCCCC---hHHHHHH
Q 011353 275 GQFS--SDEGTELVRLASRCLQYEPRERPN---PRSLVTA 309 (488)
Q Consensus 275 ~~~~--~~~~~~l~~li~~cl~~~p~~Rps---~~~il~~ 309 (488)
-.+| ...++++.+||.+.+. +|+.|.. +.++..|
T Consensus 300 l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 300 LSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred cCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 1222 3478899999999885 6888877 8888777
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=299.21 Aligned_cols=240 Identities=19% Similarity=0.218 Sum_probs=187.2
Q ss_pred CCCeEEEEE-eCCCCEEEEEEcCCC--CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHhhhc
Q 011353 69 APNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF 145 (488)
Q Consensus 69 ~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~ 145 (488)
++|.||.+. ..++..||||+++.. .......+.+|+.+++.++|+||+++++++.+.+..+++|||+++|+|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 445556555 336889999998754 22345679999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----------Ccccc
Q 011353 146 HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----------RSYST 214 (488)
Q Consensus 146 ~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----------~~~~~ 214 (488)
......+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.+||+|||.+...... ....+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSK-GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 65445689999999999999999999998 9999999999999999999999999987643221 12345
Q ss_pred CCCCCCccccccC--CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh----hcccccccc------------------
Q 011353 215 NLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----DRNIQTLTD------------------ 270 (488)
Q Consensus 215 ~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----~~~~~~~~~------------------ 270 (488)
+..|+|||++.+. .++.++|||||||++|||++|..||......... .+......+
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
T cd08216 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN 250 (314)
T ss_pred cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence 6789999998763 4888999999999999999999888643211110 000000000
Q ss_pred --c----cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 --S----CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 --~----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. ..........+.++.+++..||..||++|||+.+++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0 00011123356789999999999999999999999987
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=292.33 Aligned_cols=236 Identities=19% Similarity=0.196 Sum_probs=187.6
Q ss_pred CCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc---cHHHHHHHHH---HHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEAR---AVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
||+|+||.||++. ..+++.||+|.+...... ....+..|.. .++...||||+.+++++.+.+..++||||++|
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g 81 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 81 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence 6999999999998 456889999998754322 1222444443 34445799999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--CccccC
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN 215 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~~~~~~ 215 (488)
|+|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... ....++
T Consensus 82 ~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (278)
T cd05606 82 GDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (278)
T ss_pred CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence 999998864 34699999999999999999999998 9999999999999999999999999998754332 234678
Q ss_pred CCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhh---HHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 216 LAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 216 ~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..|+|||++.++ .++.++||||+||++|+|++|+.||..... ........ ......+...+..+.+++.+
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~s~~~~~li~~ 232 (278)
T cd05606 159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL------TMAVELPDSFSPELRSLLEG 232 (278)
T ss_pred cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh------ccCCCCCCcCCHHHHHHHHH
Confidence 999999999754 589999999999999999999988865411 11110000 01112333456789999999
Q ss_pred hccCCCCCCC-----ChHHHHHH
Q 011353 292 CLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rp-----s~~~il~~ 309 (488)
||..+|.+|| ++.+++++
T Consensus 233 ~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 233 LLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred HhhcCHHhccCCCCCCHHHHHhC
Confidence 9999999999 89899875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=295.86 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=195.1
Q ss_pred CCCcccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 131 (488)
++.++.+++.||.|+||.||+|... ++..||||.++..... ....+.+|+.++..+ .||||+++++++.+....++|
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 4566788899999999999999965 4889999999754322 344567788777777 599999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||+.+ +|.+++... ...+++..+..++.|++.||.|||+..+++||||+|+||++++++.+||+|||++.......
T Consensus 93 ~e~~~~-~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 93 MELMST-CLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred eeccCc-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 999854 787777542 34789999999999999999999974489999999999999999999999999987654322
Q ss_pred --ccccCCCCCCccccccCC----CCCCccchhhHHHHHHHHhCCCCCCchhh--HHHhhccccccccccccCCCChHHH
Q 011353 211 --SYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 211 --~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
...++..|+|||.+.+.. ++.++||||||+++|+|++|+.||..... +.... ........ . ......+
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~-~--~~~~~~~ 246 (296)
T cd06618 171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTK-ILQEEPPS-L--PPNEGFS 246 (296)
T ss_pred ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHH-HhcCCCCC-C--CCCCCCC
Confidence 234577899999987654 78899999999999999999988754211 11110 00000000 0 0111245
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
.++.+++.+||..+|.+||++.+++.+-
T Consensus 247 ~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 247 PDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 7899999999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=295.89 Aligned_cols=248 Identities=19% Similarity=0.249 Sum_probs=197.8
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|++++.||.|++|.||++.. .++..+++|.++..... ....+.+|+.+++.++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 45677889999999999994 57889999998765432 3557889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----c
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----~ 211 (488)
++ +|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.+....... .
T Consensus 81 ~~-~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 DT-DLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSH-GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred CC-CHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHC-CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 76 888888653 25799999999999999999999998 99999999999999999999999999987654432 3
Q ss_pred cccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHH-hh----------cccccccc---------
Q 011353 212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-RD----------RNIQTLTD--------- 270 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~----------~~~~~~~~--------- 270 (488)
..++..|+|||.+.+. ..+.++||||||+++|+|+||+.||+....... .. .....+..
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 4467789999999876 689999999999999999999988764321100 00 00000000
Q ss_pred --c--cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 --S--CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 --~--~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. ..........+..+.+++.+||+.||.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 00001112356789999999999999999999999875
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=291.93 Aligned_cols=236 Identities=21% Similarity=0.229 Sum_probs=192.9
Q ss_pred CCCCCCCeEEEEEeC-CCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 65 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
||.|+||.||++... +++.+++|.+..... .....+.+|+.+++.++||||+++++.+......++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999965 589999999975433 2355688999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----------
Q 011353 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----------- 209 (488)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----------- 209 (488)
.+++.+. ..+++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLENV--GSLDEDVARIYIAEIVLALEYLHSN-GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 9999753 3689999999999999999999998 9999999999999999999999999998754332
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChH--HHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EGTELV 286 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 286 (488)
....++..|++||.+.....+.++||||||+++++|++|..||................. ..+.. .+..+.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 231 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI------EWPEDVEVSDEAI 231 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc------CCCccccCCHHHH
Confidence 123457789999999888899999999999999999999988765433222211111000 11111 267899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++.+||+.+|.+|||+..+.+.
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~ 254 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEI 254 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHH
Confidence 99999999999999999444443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=302.51 Aligned_cols=263 Identities=15% Similarity=0.215 Sum_probs=199.1
Q ss_pred HHHHHHHh-cCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEE
Q 011353 46 IETLRTAT-SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGC 121 (488)
Q Consensus 46 ~~~~~~~~-~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~ 121 (488)
.+++.+++ .-...|.++..||.|+||.||+|. ..++..||||++..... .....+.+|+.+++.++||||++++++
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 82 (342)
T cd07879 3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82 (342)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhe
Confidence 34444443 223467778888999999999999 45789999999875321 224568899999999999999999999
Q ss_pred EeeCC------eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCe
Q 011353 122 CCEGD------ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (488)
Q Consensus 122 ~~~~~------~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (488)
+.... ..++|+||+.. +|..++ +..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dlkp~NIll~~~~~~ 156 (342)
T cd07879 83 FTSAVSGDEFQDFYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSA-GIIHRDLKPGNLAVNEDCEL 156 (342)
T ss_pred ecccccCCCCceEEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCE
Confidence 87543 46899999964 777765 33589999999999999999999998 99999999999999999999
Q ss_pred eeecCCCccccCCC-CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc--------
Q 011353 196 RLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------- 265 (488)
Q Consensus 196 kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------- 265 (488)
+|+|||+++..... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.............
T Consensus 157 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 157 KILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGP 236 (342)
T ss_pred EEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999998765433 23456788999999876 458899999999999999999999886542111000000
Q ss_pred -----------cccc---cccccCCC---ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhhh
Q 011353 266 -----------QTLT---DSCLEGQF---SSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ 314 (488)
Q Consensus 266 -----------~~~~---~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~ 314 (488)
.... ........ .+..+..+.+++.+||+.||.+||++.+++.+ ++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000 00000000 01235678999999999999999999999987 55554
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=297.19 Aligned_cols=252 Identities=17% Similarity=0.208 Sum_probs=191.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCC-----
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD----- 126 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 126 (488)
....|++++.||+|+||.||+|.. .++..||||.+..... .....+.+|+.++++++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 345678889999999999999994 5689999999864322 22345678999999999999999999987654
Q ss_pred ---eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 127 ---ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 127 ---~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
..++||||+.+ +|.+.+... ...+++..+..++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 35999999965 888888542 33689999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCC--------ccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHh-------hccccc
Q 011353 204 KNSRDGR--------SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-------DRNIQT 267 (488)
Q Consensus 204 ~~~~~~~--------~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-------~~~~~~ 267 (488)
....... ...++..|+|||.+.+.. ++.++||||||+++|+|+||..||......... ......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 7653321 224567899999987644 788999999999999999999877543211100 000000
Q ss_pred ccccc----------ccCC---------CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 LTDSC----------LEGQ---------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 ~~~~~----------~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+.... .... .+...+..+.+++.+||..||.+|||+.+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00000 0000 000123567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=288.36 Aligned_cols=250 Identities=18% Similarity=0.259 Sum_probs=194.0
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc--CCCCcccEEEEEeeCC----eeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL--RNRRLANLLGCCCEGD----ERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~~----~~~lv 131 (488)
..++++.+|+|.||.||||.+.+ +.||||++... +...|..|-.+.... +|+||++++++-.... ..+||
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred chhhHHHhhcCccceeehhhccC-ceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 44556677999999999999844 79999999743 456677777776654 7999999999876554 78999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC--------CCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--------ERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
+||.+.|+|.++|. ...++|....+|+..+++||+|||+. ..|+|||||..|||+.+++++.|+|||+|
T Consensus 287 t~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 99999999999995 45699999999999999999999983 46999999999999999999999999999
Q ss_pred cccCCCC------ccccCCCCCCccccccCC-CC-----CCccchhhHHHHHHHHhCCCCC-------Cchh--------
Q 011353 204 KNSRDGR------SYSTNLAFTPPEYLRTGR-VT-----PESVMYSFGTLLLDLLSGKHIP-------PSHA-------- 256 (488)
Q Consensus 204 ~~~~~~~------~~~~~~~y~aPE~~~~~~-~~-----~~~Dv~slG~~l~el~tg~~p~-------~~~~-------- 256 (488)
.....+. ..+||.+|||||++.+.. +. .+.||||+|.|||||+++..-. +...
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 8765432 357899999999998643 22 2589999999999999965322 1111
Q ss_pred --hHHHhhccccccccccccCCCCh-----HHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 257 --LDLIRDRNIQTLTDSCLEGQFSS-----DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
.+.+.... +....++.++. .....+.+.+..||+.||+.|.|+.-+.+.+..+....+
T Consensus 444 Pt~e~mq~~V----V~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 444 PTLEEMQELV----VRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCHHHHHHHH----HhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 11111111 11111222221 235679999999999999999999999999888876554
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=302.01 Aligned_cols=253 Identities=17% Similarity=0.258 Sum_probs=196.9
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeC-----CeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 129 (488)
.|.+++.||.|+||+||++. ..++..||||.+.... ......+.+|+.+++.++|+||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 46677888999999999999 5678999999987532 22345678899999999999999999988654 3479
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+|+||+. ++|.+++.. .+.+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus 86 lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 86 IVYELMD-TDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EEEeCCC-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 9999996 689988864 34699999999999999999999998 9999999999999999999999999998865433
Q ss_pred ----CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh-------------------hccc
Q 011353 210 ----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-------------------DRNI 265 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-------------------~~~~ 265 (488)
....++..|+|||.+.. ..++.++|||||||++|+|++|+.||......... ....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 23456788999998875 45889999999999999999999887643210000 0000
Q ss_pred ccccc---cccc---CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhhh
Q 011353 266 QTLTD---SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ 314 (488)
Q Consensus 266 ~~~~~---~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~ 314 (488)
..... .... .......+.++.+++.+||+.+|++|||+.+++++ +..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 00000 0000 00112356789999999999999999999999998 55443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=292.12 Aligned_cols=249 Identities=19% Similarity=0.200 Sum_probs=193.9
Q ss_pred ccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCc--cHHHHHHHHHHHhcc---CCCCcccEEEEEeeCCe-----
Q 011353 59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCEGDE----- 127 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~----- 127 (488)
|++++.||.|+||.||+|... ++..||+|+++..... ....+.+|+.++..+ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 456778899999999999964 5899999999754322 234566788777666 59999999999988776
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.+++|||+.+ +|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 8999999975 899988764444689999999999999999999998 99999999999999999999999999987654
Q ss_pred CCC---ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccc-----------------
Q 011353 208 DGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT----------------- 267 (488)
Q Consensus 208 ~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~----------------- 267 (488)
... ...++..|+|||++.+..++.++|||||||++|+|++|..||...............
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 332 234678899999999888999999999999999999998777543221110000000
Q ss_pred -ccccccc---CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 -LTDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 -~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....... .......+..+.+++.+||+.||.+||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000 01112346788999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=302.34 Aligned_cols=253 Identities=20% Similarity=0.299 Sum_probs=200.8
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCC-----eeEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLL 130 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~l 130 (488)
|++.+.||.|++|.||+|.. .++..||||++.... ....+.+.+|+.+++.++|+||+++++++.... ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 56778889999999999995 458899999987643 234567899999999999999999999998775 7899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
||||+++ +|.+++.+ ...+++..+..++.||+.||.|||+. |++|+||||+|||++.++.++|+|||++.......
T Consensus 82 v~e~~~~-~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~-gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 82 VTELMET-DLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSA-NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred Eecchhh-hHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 9999975 89998864 33799999999999999999999998 99999999999999999999999999988755432
Q ss_pred -------ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccc----------------
Q 011353 211 -------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ---------------- 266 (488)
Q Consensus 211 -------~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~---------------- 266 (488)
...++..|+|||++.+. .++.++||||||+++|+|++|..||..............
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 237 (330)
T cd07834 158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE 237 (330)
T ss_pred cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence 23467889999999887 789999999999999999999988865432111100000
Q ss_pred ---cccccc------ccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhhhc
Q 011353 267 ---TLTDSC------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQK 315 (488)
Q Consensus 267 ---~~~~~~------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~~ 315 (488)
...... .........+..+.+++.+||+.+|.+|||+.+++.+ ++.+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 000000 0000112246789999999999999999999999987 555444
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=299.37 Aligned_cols=247 Identities=21% Similarity=0.289 Sum_probs=191.6
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCC--CCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeC--CeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG--DERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~~lv 131 (488)
+|.+.+.||.|+||.||+|.. .++..||||++... .......+.+|+.++.++ +||||+++++++... ...++|
T Consensus 8 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv 87 (337)
T cd07852 8 KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLV 87 (337)
T ss_pred HHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEE
Confidence 466777789999999999995 46889999998643 222345577899999999 999999999998653 468999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||+++ +|.+++.. +.+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~-~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 88 FEYMET-DLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSG-NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred eccccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 999974 89998854 2689999999999999999999998 99999999999999999999999999987543321
Q ss_pred --------ccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc------------------
Q 011353 211 --------SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR------------------ 263 (488)
Q Consensus 211 --------~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~------------------ 263 (488)
...++..|+|||++.+ ..++.++||||||+++|+|+||+.||...........
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07852 163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS 242 (337)
T ss_pred cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHh
Confidence 2356788999998865 4578899999999999999999988764321100000
Q ss_pred -cccccccccc------cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 264 -NIQTLTDSCL------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 264 -~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....+..... ........+.++.+++.+||+.+|++|||+.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 243 PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000000 000111246789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=301.40 Aligned_cols=248 Identities=17% Similarity=0.255 Sum_probs=193.3
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEee----CCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~l 130 (488)
.|.+.+.||.|+||.||+|. ..++..||+|++..... .....+.+|+.+++.++||||+++++++.. ....++
T Consensus 6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 85 (334)
T cd07855 6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV 85 (334)
T ss_pred ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEE
Confidence 45566778999999999999 55689999999875422 234567889999999999999999988753 356899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||+. ++|.+++.. ...+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 86 v~e~~~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 86 VMDLME-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred EEehhh-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 999995 589998864 34599999999999999999999998 9999999999999999999999999998754322
Q ss_pred -------CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHH----h---h------------
Q 011353 210 -------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----R---D------------ 262 (488)
Q Consensus 210 -------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~----~---~------------ 262 (488)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........ . .
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 12356788999999865 4588999999999999999999988865321100 0 0
Q ss_pred cccccccccc-ccCC-----CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 263 RNIQTLTDSC-LEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 263 ~~~~~~~~~~-~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.......... .... .....+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000000000 0000 112346789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=293.46 Aligned_cols=249 Identities=16% Similarity=0.269 Sum_probs=194.8
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
|.+++.||.|++|+||+|.. .+++.|+||++...... ......+|+..+.+++ |+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 45667889999999999995 45789999998754321 2334567999999998 999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---Ccc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSY 212 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~~ 212 (488)
+|+|.+++.......+++..+..++.|++.+|.|||++ +++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence 77999998764445689999999999999999999998 9999999999999999999999999998765543 234
Q ss_pred ccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh----------------c-----ccccccc
Q 011353 213 STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD----------------R-----NIQTLTD 270 (488)
Q Consensus 213 ~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~----------------~-----~~~~~~~ 270 (488)
.++..|+|||++.+ ..++.++|+||||+++++|++|+.||+......... . .......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP 238 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence 56788999998864 457899999999999999999998876432111000 0 0000000
Q ss_pred cccc---CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 ~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.... .......+..+.+++.+||+.+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0000 00011124679999999999999999999999875
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=287.86 Aligned_cols=250 Identities=16% Similarity=0.173 Sum_probs=199.8
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-C-C----CcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N-R----RLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~----niv~l~~~~~~~~~~~ 129 (488)
.+|.+++.+|+|.||.|-.+. ...+..||||+++... .-.+..+-|+++|.++. + | -+|++.++|...++.+
T Consensus 89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 467888999999999999999 4557899999998543 22345677999999993 2 3 3888899999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC------------------
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD------------------ 191 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~------------------ 191 (488)
||+|.+ |.|+.++|..++-.+++...+..+++|++.+++|||+. +++|.||||+|||+.+
T Consensus 168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~-kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL-KLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc-ceeecCCChheEEEeccceEEEeccCCccceecc
Confidence 999999 66999999887778899999999999999999999999 9999999999999932
Q ss_pred --CCCeeeecCCCccccCCC-CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh-------HHHh
Q 011353 192 --DVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIR 261 (488)
Q Consensus 192 --~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------~~~~ 261 (488)
+..++|+|||.|...... +..+.|..|+|||++.+..++..+||||+||||.|++||...|+.+.. +.+.
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl 325 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL 325 (415)
T ss_pred CCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence 235899999999876655 455679999999999999999999999999999999999988875421 1111
Q ss_pred hcccccccccc-----------------ccC----------------CCChHHHHHHHHHHHHhccCCCCCCCChHHHHH
Q 011353 262 DRNIQTLTDSC-----------------LEG----------------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVT 308 (488)
Q Consensus 262 ~~~~~~~~~~~-----------------~~~----------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~ 308 (488)
+.....++... ..+ .........|.+|+.+||..||.+|+|+.|++.
T Consensus 326 Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 326 GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 10000000000 000 011234567999999999999999999999998
Q ss_pred H
Q 011353 309 A 309 (488)
Q Consensus 309 ~ 309 (488)
|
T Consensus 406 H 406 (415)
T KOG0671|consen 406 H 406 (415)
T ss_pred C
Confidence 7
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=292.96 Aligned_cols=246 Identities=17% Similarity=0.228 Sum_probs=194.2
Q ss_pred ccccccCCCCCCCeEEEEEe----CCCCEEEEEEcCCCCC----ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
|++.+.||.|+||.||++.. .+|..||+|+++.... ...+.+.+|+.++..+ +|+||+++++.+..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 56778889999999999985 3688999999875321 2245688899999999 5999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+|||++.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 99999999999999965 34588999999999999999999998 9999999999999999999999999998765432
Q ss_pred -----CccccCCCCCCccccccC--CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 210 -----RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
....++..|+|||.+.+. .++.++||||||+++|+|++|..|+................... ...++...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--EPPYPQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--CCCCCccCC
Confidence 123468899999998753 46789999999999999999998875321100000000000000 112334456
Q ss_pred HHHHHHHHHhccCCCCCCC-----ChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rp-----s~~~il~~ 309 (488)
..+.+++.+||+.+|++|| ++.+++.+
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 7899999999999999997 66777665
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=302.91 Aligned_cols=241 Identities=19% Similarity=0.221 Sum_probs=200.1
Q ss_pred CCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.+..|.+-.++|.|+|+.|-.+. ..+++..+||++.+.. .+..+|+.++... +||||+++.+++.+..+.++||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 46778888899999999999998 6678899999998662 2234677676666 7999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee-CCCCCeeeecCCCccccCCCC-
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF-DDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill-~~~~~~kl~DfGla~~~~~~~- 210 (488)
|++.|+-|.+.+.. .+.....+..|+.+|+.++.|||++ |+|||||||+|||+ ++.++++|+|||.++......
T Consensus 396 e~l~g~ell~ri~~---~~~~~~e~~~w~~~lv~Av~~LH~~-gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 396 ELLDGGELLRRIRS---KPEFCSEASQWAAELVSAVDYLHEQ-GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred hhccccHHHHHHHh---cchhHHHHHHHHHHHHHHHHHHHhc-CeeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 99999998888854 2233367788999999999999998 99999999999999 699999999999998776652
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
+..-|..|.|||++....++.++|+||||++||+|++|+.||.....+. ++......+.+....+..+++|+.
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~-------ei~~~i~~~~~s~~vS~~AKdLl~ 544 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI-------EIHTRIQMPKFSECVSDEAKDLLQ 544 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH-------HHHHhhcCCccccccCHHHHHHHH
Confidence 2244788999999998999999999999999999999999987654431 111112223333557889999999
Q ss_pred HhccCCCCCCCChHHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L 310 (488)
+||+.||.+||++.++..+=
T Consensus 545 ~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 545 QLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred HhccCChhhCcChhhhccCc
Confidence 99999999999999998873
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=293.26 Aligned_cols=243 Identities=21% Similarity=0.244 Sum_probs=199.8
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 132 (488)
+|.+.+.||.|+||.||++.. .++..||+|++..... .....+.+|+.++.+++ ||||+++++++.+.+..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 466778889999999999994 5789999999875322 22456888999999998 999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC--
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 210 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-- 210 (488)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~-~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSK-GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999975 34699999999999999999999998 99999999999999999999999999987544322
Q ss_pred ----------------------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccc
Q 011353 211 ----------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268 (488)
Q Consensus 211 ----------------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 268 (488)
...++..|++||++.+..++.++||||||++++++++|+.|+.............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--- 235 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL--- 235 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH---
Confidence 1235678999999988889999999999999999999998876543211111111
Q ss_pred ccccccCCCChHHHHHHHHHHHHhccCCCCCCCCh----HHHHHH
Q 011353 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP----RSLVTA 309 (488)
Q Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~----~~il~~ 309 (488)
.....++...+..+.+++.+||+.+|.+|||+ .+++++
T Consensus 236 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 236 ---KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred ---hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 01112334456789999999999999999999 887765
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=292.99 Aligned_cols=249 Identities=18% Similarity=0.216 Sum_probs=195.9
Q ss_pred ccccccCCCCCCCeEEEEEe----CCCCEEEEEEcCCCCC----ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
|++++.||.|++|.||++.. .++..||||+++.... .....+.+|+.++..+ +||||+++++.+......+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 56677889999999999984 3568899999874321 1234688999999999 5999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||+++.....
T Consensus 82 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~-~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQL-GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 99999999999999864 34689999999999999999999998 9999999999999999999999999998764332
Q ss_pred C-----ccccCCCCCCccccccCC--CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 210 R-----SYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 210 ~-----~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
. ...++..|++||.+.+.. .+.++||||||+++|+|+||..|+................... ....+...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMS 236 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccC
Confidence 1 234688999999987655 7889999999999999999998875321100000000001100 112233356
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHHHHh
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 312 (488)
..+.+++.+||+.+|++|||+.++...|+.
T Consensus 237 ~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 237 AEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 789999999999999999998877666554
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=301.39 Aligned_cols=248 Identities=16% Similarity=0.218 Sum_probs=191.7
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeC----------
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG---------- 125 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---------- 125 (488)
.+|.+++.||.|+||.||+|. ..++..||+|.+........+.+.+|+++++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 457788889999999999999 466889999999766555567789999999999999999999776543
Q ss_pred ----CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC-CCCCeeeecC
Q 011353 126 ----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCF 200 (488)
Q Consensus 126 ----~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Df 200 (488)
...++||||++ ++|.+++. ...+++..+..++.||+.||.|||+. |++||||||+||+++ .++.++|+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~-givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCceEEECCc
Confidence 35789999997 48988884 34589999999999999999999998 999999999999997 4567899999
Q ss_pred CCccccCCC-------CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc-------
Q 011353 201 GLMKNSRDG-------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------- 265 (488)
Q Consensus 201 Gla~~~~~~-------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------- 265 (488)
|++...... ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 998764322 12345778999998764 457889999999999999999998886432110000000
Q ss_pred --------ccccc----ccccC-----CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 --------QTLTD----SCLEG-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 --------~~~~~----~~~~~-----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... ..... ......+.++.+++.+||+.||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000 00000 0011245678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=280.04 Aligned_cols=244 Identities=17% Similarity=0.201 Sum_probs=194.2
Q ss_pred ccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
-+++||.|+||+|+|-. .+.|+..|||+++.... ...++++.|.+...+- +.||||+++|.+-..+..+|.||+|+-
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~ 147 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI 147 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh
Confidence 45778999999999998 67899999999987654 3456788888875555 799999999999999999999999965
Q ss_pred CCHHhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---Cc
Q 011353 138 DTLAKHLFH---WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 211 (488)
Q Consensus 138 gsL~~~l~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~ 211 (488)
||+.+... -....+++..+-.|...+.+||.||-....|||||+||+|||++..|.+||+|||++....+. +.
T Consensus 148 -SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~ 226 (361)
T KOG1006|consen 148 -SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV 226 (361)
T ss_pred -hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhh
Confidence 77765532 234468999999999999999999988778999999999999999999999999998765443 44
Q ss_pred cccCCCCCCcccccc--CCCCCCccchhhHHHHHHHHhCCCCCCchhh--HHH---hhccccccccccccCCCChHHHHH
Q 011353 212 YSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLI---RDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
..|-..|||||-+.. ..|+.+|||||||++|+|+.||..|...... +.+ ..+....+. ......+.+..
T Consensus 227 daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~----~~~~~~~~s~~ 302 (361)
T KOG1006|consen 227 DAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILL----FDKECVHYSFS 302 (361)
T ss_pred ccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeec----CcccccccCHH
Confidence 567789999999864 3489999999999999999999977654321 111 111111111 11112346778
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHH
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+..+|..||.+|-..||.+.+++.+
T Consensus 303 ~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 303 MVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHHHHHhhcccccCcchhhhhcC
Confidence 9999999999999999999998876
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=289.82 Aligned_cols=247 Identities=21% Similarity=0.254 Sum_probs=195.5
Q ss_pred cccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 60 NIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
++++.||+|++|.||+|.. .+++.||+|++.... ......+..|+.+++.++|+||+++++++.+.+..++||||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 4567789999999999994 458999999998653 2234568899999999999999999999999999999999997
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----cc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----~~ 212 (488)
++|.+++.... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++....... ..
T Consensus 82 -~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 82 -MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred -cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 48999997532 4699999999999999999999998 99999999999999999999999999987654332 23
Q ss_pred ccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-----------c---------cccccc
Q 011353 213 STNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------I---------QTLTDS 271 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~---------~~~~~~ 271 (488)
..+..|+|||.+.+. .++.++|||||||+++||++|..||............ + ......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 346789999998876 7899999999999999999998877654321110000 0 000000
Q ss_pred cccC---CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 CLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 ~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.... ...+..+..+.+++..||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000 0011235689999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=317.16 Aligned_cols=250 Identities=19% Similarity=0.189 Sum_probs=189.1
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEee-------
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCE------- 124 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 124 (488)
+.+.+++.+..||+|+||.|||++ .-||+.+|||+|.... ......+.+|+.+|.+|+|||||+++..|.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 344555666777999999999999 6689999999998653 2234568899999999999999999854310
Q ss_pred -----------------------------------------------------------------------C--------
Q 011353 125 -----------------------------------------------------------------------G-------- 125 (488)
Q Consensus 125 -----------------------------------------------------------------------~-------- 125 (488)
+
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred ---------------------------------CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 011353 126 ---------------------------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172 (488)
Q Consensus 126 ---------------------------------~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH 172 (488)
..+||-||||+.-+|.++++++.-. -.....++++.+|+.||.|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHH
Confidence 1248999999998888888653211 136678999999999999999
Q ss_pred cCCCcccccccCcceeeCCCCCeeeecCCCccccC----------------------CCCccccCCCCCCccccccCC--
Q 011353 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----------------------DGRSYSTNLAFTPPEYLRTGR-- 228 (488)
Q Consensus 173 ~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~----------------------~~~~~~~~~~y~aPE~~~~~~-- 228 (488)
+. |+|||||||.||+++++..|||+|||+|.... +.+...||.-|+|||++.+..
T Consensus 715 ~~-giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 715 DQ-GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred hC-ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 99 99999999999999999999999999988611 113456788999999998754
Q ss_pred -CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHH
Q 011353 229 -VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307 (488)
Q Consensus 229 -~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il 307 (488)
|+.|+|+||||||++||+. ||.........-..+....-+.. ..+.....+.-..+|.++++.||.+|||+.++|
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL 869 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSKRPTATELL 869 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence 9999999999999999996 45543322111111111111111 223334456678999999999999999999998
Q ss_pred HH
Q 011353 308 TA 309 (488)
Q Consensus 308 ~~ 309 (488)
+.
T Consensus 870 ~s 871 (1351)
T KOG1035|consen 870 NS 871 (1351)
T ss_pred hc
Confidence 74
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=293.12 Aligned_cols=250 Identities=21% Similarity=0.227 Sum_probs=192.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCC-------
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------- 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 126 (488)
..|.+.+.||.|+||.||+|.. .+++.||||.++.... .....+.+|+.+++.++||||+++++++.+..
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 3456677789999999999995 4688999999975432 23346788999999999999999999987654
Q ss_pred ---eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 127 ---ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 127 ---~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
..++|+||+++ +|.+++... ...+++..+..++.||+.||.|||+. +++|+||||+||++++++.+||+|||++
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~kl~dfg~~ 163 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSNILLNNKGQIKLADFGLA 163 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCcEEeCccccc
Confidence 78999999976 777777543 34689999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCC-----ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHH----Hhh---ccc----c
Q 011353 204 KNSRDGR-----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----IRD---RNI----Q 266 (488)
Q Consensus 204 ~~~~~~~-----~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~~---~~~----~ 266 (488)
....... ...++..|+|||++.+. .++.++|||||||++++|++|+.||....... +.. ... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (302)
T cd07864 164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP 243 (302)
T ss_pred ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence 7654322 12346789999988654 47889999999999999999997775432110 000 000 0
Q ss_pred cccccccc-------------CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 267 TLTDSCLE-------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 267 ~~~~~~~~-------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+...... .......+..+.+++..||+.+|.+|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000000 00011246789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=295.83 Aligned_cols=248 Identities=18% Similarity=0.178 Sum_probs=191.8
Q ss_pred ccccc-ccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc--------------HHHHHHHHHHHhccCCCCcccEEEE
Q 011353 58 MENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--------------ARQFLEEARAVGQLRNRRLANLLGC 121 (488)
Q Consensus 58 ~~~~i-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~l~~~ 121 (488)
+|..+ +.||.|+||+||+|. ..+++.||||++....... ...+.+|+.+++.++|+||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 44444 458999999999999 4568999999986543221 1247789999999999999999999
Q ss_pred EeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCC
Q 011353 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (488)
Q Consensus 122 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfG 201 (488)
+...+..++||||+. |+|.+++.. ...+++.....++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~-~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKW-YFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHeEECCCCCEEECCcc
Confidence 999999999999997 589999864 34589999999999999999999998 99999999999999999999999999
Q ss_pred CccccCCC------------------CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh
Q 011353 202 LMKNSRDG------------------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD 262 (488)
Q Consensus 202 la~~~~~~------------------~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 262 (488)
++...... ....++..|+|||.+.+.. ++.++|||||||++|+|+||..||..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 244 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG 244 (335)
T ss_pred ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 98754410 1123467899999987644 6889999999999999999998876542211100
Q ss_pred c-------cccc-cccc-----------ccc---CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 263 R-------NIQT-LTDS-----------CLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 263 ~-------~~~~-~~~~-----------~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. .... +... ... .......+..+.+++.+||+.+|++|||+.+++.+
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 0 0000 0000 000 00012235678999999999999999999999986
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=293.76 Aligned_cols=247 Identities=17% Similarity=0.258 Sum_probs=192.8
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEee-CCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~E 133 (488)
.|.+++.||.|+||.||++. ..++..||||++.... ....+.+.+|+.++..++||||+++++++.. ....++|+|
T Consensus 11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e 90 (328)
T cd07856 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE 90 (328)
T ss_pred ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence 45677788999999999998 5578999999886432 2234568899999999999999999999865 567899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-Ccc
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~ 212 (488)
|+ +++|.+++. ..++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 91 ~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~-~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 165 (328)
T cd07856 91 LL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY 165 (328)
T ss_pred hh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCC
Confidence 98 568998884 34588888999999999999999999 9999999999999999999999999998765433 234
Q ss_pred ccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHH----h---------------hcccccccccc
Q 011353 213 STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----R---------------DRNIQTLTDSC 272 (488)
Q Consensus 213 ~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~----~---------------~~~~~~~~~~~ 272 (488)
.++..|+|||.+.+ ..++.++|||||||++|+|+||+.||+....... . ......+....
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (328)
T cd07856 166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSL 245 (328)
T ss_pred cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhc
Confidence 56788999999876 4689999999999999999999988764321000 0 00000000000
Q ss_pred c-cCCCC-----hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 273 L-EGQFS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 273 ~-~~~~~-----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. ....+ ...+..+.++|.+||+.+|++|||+.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 246 PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 00011 1245789999999999999999999999877
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=293.61 Aligned_cols=239 Identities=21% Similarity=0.228 Sum_probs=200.0
Q ss_pred ccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
+.||+|.||+||-|+ ..+|+.||||+|.+.... ...++.+|+.+|+.++||.||.+...|+..+.+++|||-+.| +
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-D 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-D 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-h
Confidence 457999999999999 567999999999865433 356789999999999999999999999999999999999955 6
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC---CCeeeecCCCccccCCC---Cccc
Q 011353 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG---RSYS 213 (488)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~DfGla~~~~~~---~~~~ 213 (488)
+.+.|...+.+.+++.....++.||+.||.|||.+ +|+|+||||+|||+.+. -.+||+|||+|+..... ++..
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k-nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFK-NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc-ceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence 66666666677899999999999999999999999 99999999999999533 46999999999988764 5678
Q ss_pred cCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCch--hhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH--ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 214 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
||+.|+|||+++...|+..-|+||.|||+|--++|..||..+ ..+.+.+..+.--. ..-.+.+..+.+||..
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp------~PW~eis~~AidlIn~ 801 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPP------NPWSEISPEAIDLINN 801 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCC------CchhhcCHHHHHHHHH
Confidence 999999999999999999999999999999999999887643 22223222222111 1224567889999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
+|+..-.+|-|....+.|
T Consensus 802 LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 802 LLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred HHHHHHHHhcchHhhccc
Confidence 999999999998877665
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=287.50 Aligned_cols=237 Identities=19% Similarity=0.251 Sum_probs=199.9
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 131 (488)
.+++++..||+|+||.|.++. ..+.+.+|||+++++.. .+.+--+.|-++|... +-|.+++++.+|...+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 356778888999999999999 45578999999987532 2233345677778777 678999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC----
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR---- 207 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~---- 207 (488)
|||+.||+|--+|.. -+.+.+..+..++.+|+-||-|||++ |||+||||.+|||+|.+|++||+|||+++..-
T Consensus 429 MEyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFLh~k-gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhhhcC-CeeeeeccccceEeccCCceEeeecccccccccCCc
Confidence 999999999988865 34588999999999999999999999 99999999999999999999999999988532
Q ss_pred CCCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 208 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 208 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
..++..||+.|+|||.+...+|+.++|.|||||+||||+.|++||.++..+.+-...... .-.+|...+.++.+
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh------nvsyPKslSkEAv~ 579 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH------NVSYPKSLSKEAVA 579 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc------cCcCcccccHHHHH
Confidence 234668999999999999999999999999999999999999999887655443332221 12467778899999
Q ss_pred HHHHhccCCCCCCCC
Q 011353 288 LASRCLQYEPRERPN 302 (488)
Q Consensus 288 li~~cl~~~p~~Rps 302 (488)
+....|.+.|.+|..
T Consensus 580 ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 580 ICKGLLTKHPGKRLG 594 (683)
T ss_pred HHHHHhhcCCccccC
Confidence 999999999999953
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=285.39 Aligned_cols=244 Identities=16% Similarity=0.194 Sum_probs=194.3
Q ss_pred ccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCC-----CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
|.+.+.||.|+||.||++... .+..+++|.++... .....++..|+.+++.++||||+++++++.+....++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 567788999999999999843 34456666654321 123445778999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 133 EYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||+++++|.+++.. .....+++..+..++.|++.||.|||+. +++|+||+|+||++++ +.++|+|||++......
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 99999999998864 2345689999999999999999999998 9999999999999975 56999999998765332
Q ss_pred ---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
....+++.|+|||.+.+..++.++|+||||+++|+|++|..||.............. ......+...+.++.
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 234 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-----GPTPSLPETYSRQLN 234 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-----CCCCCCcchhcHHHH
Confidence 234567889999999888889999999999999999999988764332211111111 111123445677899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++.+||+.+|++||++.+++++
T Consensus 235 ~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 235 SIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHHHhcCChhhCcCHHHHhhC
Confidence 99999999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=282.63 Aligned_cols=236 Identities=22% Similarity=0.244 Sum_probs=194.6
Q ss_pred CCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
||.|+||.||++.. .++..+|+|.+...... ....+..|+.+++.++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 59999999999995 45889999998765432 345688999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----CccccCC
Q 011353 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL 216 (488)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~~~~~ 216 (488)
.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~-~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSK--EGRFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999965 33589999999999999999999998 9999999999999999999999999998765442 2345678
Q ss_pred CCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCC
Q 011353 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (488)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 296 (488)
.|++||...+...+.++|+||||+++|++++|..||.............. ....++...+..+.+++.+||..|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK------DPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc------CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999999888889999999999999999999988865432221111111 111233334678999999999999
Q ss_pred CCCCCCh---HHHHHH
Q 011353 297 PRERPNP---RSLVTA 309 (488)
Q Consensus 297 p~~Rps~---~~il~~ 309 (488)
|++||++ .+++.+
T Consensus 232 p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 232 PTKRLGSGGAEEIKAH 247 (250)
T ss_pred HhhCCCcccHHHHHhC
Confidence 9999999 555543
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=296.26 Aligned_cols=248 Identities=15% Similarity=0.205 Sum_probs=194.3
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCC------e
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 127 (488)
..|.+++.||.|+||.||++. ..++..||||++...... ....+.+|+.+++.++||||+++++++.... .
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD 94 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence 457788899999999999998 567899999998653222 2346889999999999999999999987654 3
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+ +++|.+++. ...+++..+..++.||+.||.|||+. |++||||||+||+++.++.++|+|||++....
T Consensus 95 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~-gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 95 FYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred EEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 58999999 779998884 34689999999999999999999998 99999999999999999999999999988654
Q ss_pred CC-CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc-------cc------------c
Q 011353 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-------NI------------Q 266 (488)
Q Consensus 208 ~~-~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-------~~------------~ 266 (488)
.. ....+++.|++||++.+ ..++.++|+|||||++|+|++|..||........... .. .
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07880 170 SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAK 249 (343)
T ss_pred cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHH
Confidence 43 23456889999999876 3588899999999999999999988764321100000 00 0
Q ss_pred cccc---cccc---CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 267 TLTD---SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 267 ~~~~---~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.... .... .......+..+.+++.+||..||.+|||+.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 250 NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000 00112345678999999999999999999999976
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=295.47 Aligned_cols=248 Identities=18% Similarity=0.224 Sum_probs=192.5
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeC------Ce
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 127 (488)
..|.+++.||+|+||.||++. ..++..||+|++..... ...+.+.+|+.++.+++||||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 96 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence 456677888999999999998 56788999999975422 2245688899999999999999999988643 34
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++....
T Consensus 97 ~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 97 VYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred EEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 67888887 7799988853 3589999999999999999999998 99999999999999999999999999987654
Q ss_pred CC-CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc-------cccccc---------
Q 011353 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-------NIQTLT--------- 269 (488)
Q Consensus 208 ~~-~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-------~~~~~~--------- 269 (488)
.. ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||+.......... ....+.
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
T cd07877 172 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 251 (345)
T ss_pred ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHH
Confidence 43 23466889999999876 4688899999999999999999988764321110000 000000
Q ss_pred ------cccccC---CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 ------DSCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 ------~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...... ......+..+.+++.+||+.||.+|||+.+++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 252 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000 0001235678999999999999999999999988
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=305.52 Aligned_cols=251 Identities=20% Similarity=0.269 Sum_probs=207.1
Q ss_pred ccccccCCCCCCCeEEEEEe-CC----CCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-EN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.+..++||.|+||+||+|.+ +. ..+||+|++..... +...+++.|+-.|.+|+|||+++++|+|.... +.||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34457789999999999984 44 35789999876543 34667999999999999999999999998765 88999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 212 (488)
+|+++|+|.++++.+ +.++-....+.|..||++||.|||.+ +++||||...|||+..-.++||.|||+++........
T Consensus 777 q~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~q-rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQ-RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred HhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhc-chhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 999999999999874 45688899999999999999999998 9999999999999999999999999999986654322
Q ss_pred ------ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 213 ------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 213 ------~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
...+.|||-|.+....++.++|||||||++||++| |..|..+...+.+ ..++....+-.-|+.++-++
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI-----~dlle~geRLsqPpiCtiDV 929 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI-----PDLLEKGERLSQPPICTIDV 929 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-----hHHHhccccCCCCCCccHHH
Confidence 22567999999999999999999999999999999 6666655433322 22222222223456688899
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
..++.+||..|+..||+++++...+.+..+.+
T Consensus 930 y~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 930 YMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred HHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 99999999999999999999999988876554
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=300.66 Aligned_cols=191 Identities=23% Similarity=0.260 Sum_probs=167.3
Q ss_pred ccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCC------eeEEEEec
Q 011353 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ERLLVAEY 134 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~E~ 134 (488)
..||+|+||.||+|+ ..+|+.||||.++... ....+...+|+++|++|+|+|||+++++-++.. ...+||||
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy 98 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY 98 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence 446999999999999 7789999999998743 345677999999999999999999999866543 46899999
Q ss_pred CCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee--CCCC--CeeeecCCCccccCCC
Q 011353 135 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF--DDDV--NPRLSCFGLMKNSRDG 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill--~~~~--~~kl~DfGla~~~~~~ 209 (488)
|.||||...|.+.++ ..+++...+.++.+++.||.|||++ ||+||||||.||++ +.+| .-||+|||.|+...+.
T Consensus 99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn-~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~ 177 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN-GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN 177 (732)
T ss_pred cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence 999999999976432 4699999999999999999999998 99999999999999 3334 4799999999988776
Q ss_pred C---ccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCc
Q 011353 210 R---SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPS 254 (488)
Q Consensus 210 ~---~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~ 254 (488)
+ +..||..|.+||+... ..|+.-+|.|||||++|+.+||..||-.
T Consensus 178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 4 5679999999999984 7799999999999999999999999854
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=274.18 Aligned_cols=243 Identities=20% Similarity=0.200 Sum_probs=194.4
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCCCHH
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 141 (488)
.||+|+++.|-.+. ..+|..+|||++.+.......+..+|++++..+ .|+||++++.+|+++...|+|||-|.||+|.
T Consensus 85 ~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplL 164 (463)
T KOG0607|consen 85 LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLL 164 (463)
T ss_pred HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHH
Confidence 36999999999998 788999999999887656677899999999999 4999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC---CeeeecCCCccccCCC---------
Q 011353 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNSRDG--------- 209 (488)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~DfGla~~~~~~--------- 209 (488)
++|.. +.-+++..+.++..+|+.||.|||.+ ||.||||||+|||-..-. -+||+||.+.......
T Consensus 165 shI~~--~~~F~E~EAs~vvkdia~aLdFlH~k-gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP 241 (463)
T KOG0607|consen 165 SHIQK--RKHFNEREASRVVKDIASALDFLHTK-GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTP 241 (463)
T ss_pred HHHHH--hhhccHHHHHHHHHHHHHHHHHHhhc-CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCc
Confidence 99975 45599999999999999999999999 999999999999996443 4899999886543221
Q ss_pred --CccccCCCCCCccccc---c--CCCCCCccchhhHHHHHHHHhCCCCCCchhhH--HHhhcc-----ccccccccccC
Q 011353 210 --RSYSTNLAFTPPEYLR---T--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD--LIRDRN-----IQTLTDSCLEG 275 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~---~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~--~~~~~~-----~~~~~~~~~~~ 275 (488)
.+..|+-.|||||+.. + ..|+.++|.||||||||-|++|.+||.+.-.. -|..+. ...+......+
T Consensus 242 ~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEG 321 (463)
T KOG0607|consen 242 ELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG 321 (463)
T ss_pred cccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhcc
Confidence 1234566799999874 2 34899999999999999999999998754110 000000 01111111111
Q ss_pred --CCC----hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 276 --QFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 276 --~~~----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
++| ...+.+..+++..+|..++.+|.++..++++
T Consensus 322 kYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 322 KYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 223 2467889999999999999999998888875
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=291.63 Aligned_cols=251 Identities=18% Similarity=0.218 Sum_probs=190.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeC-------
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG------- 125 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 125 (488)
..+|.+++.||.|+||.||+|.. .+++.||||++...... ....+.+|+++++.++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 45778888899999999999994 56889999998644322 234578899999999999999999987543
Q ss_pred -CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 126 -DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 126 -~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
...++||||+.+ +|.+.+... ...+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|+|||++.
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECcCccch
Confidence 346999999965 677777542 34699999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCC---------------ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc-----
Q 011353 205 NSRDGR---------------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR----- 263 (488)
Q Consensus 205 ~~~~~~---------------~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~----- 263 (488)
...... ...+++.|+|||.+.+. .++.++|||||||++|+|++|+.||...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 543221 12346789999988754 478999999999999999999987754321110000
Q ss_pred ------------cccccccccccCCCC-------hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 264 ------------NIQTLTDSCLEGQFS-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 264 ------------~~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..............+ ......+.+++.+||+.+|.+|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 000000000000000 1123678999999999999999999998865
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=296.27 Aligned_cols=241 Identities=17% Similarity=0.177 Sum_probs=203.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEeCCCC-EEEEEEcCCCCCcc---HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLENQF-RIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.+++.+++..||-|+||.|-++...+.. .+|+|++++...-+ .+....|-.+|..++.|.||+++..|.+...+|+
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 4567778899999999999999965543 48999998765443 3447789999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
+||-|-||.|+..|++ ++.++..+...++..++.|++|||++ |||+|||||+|.+++.+|-+||.|||+|+....+.
T Consensus 498 LmEaClGGElWTiLrd--Rg~Fdd~tarF~~acv~EAfeYLH~k-~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 498 LMEACLGGELWTILRD--RGSFDDYTARFYVACVLEAFEYLHRK-GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hHHhhcCchhhhhhhh--cCCcccchhhhhHHHHHHHHHHHHhc-CceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 9999999999999975 56699999999999999999999999 99999999999999999999999999999887764
Q ss_pred ---ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 211 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
+.+||+.|.|||++.....+.++|.||||+++|||+||.+||.+-......+..+. -++. -.+|...+....+
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILk-Gid~---i~~Pr~I~k~a~~ 650 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILK-GIDK---IEFPRRITKTATD 650 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHh-hhhh---hhcccccchhHHH
Confidence 45799999999999999999999999999999999999988765432221111111 1111 1355667788999
Q ss_pred HHHHhccCCCCCCCC
Q 011353 288 LASRCLQYEPRERPN 302 (488)
Q Consensus 288 li~~cl~~~p~~Rps 302 (488)
+|.+++..+|.+|..
T Consensus 651 Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 651 LIKKLCRDNPTERLG 665 (732)
T ss_pred HHHHHHhcCcHhhhc
Confidence 999999999999964
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=315.65 Aligned_cols=146 Identities=21% Similarity=0.215 Sum_probs=130.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
+..|.+++.||.|+||.||+|.. .+++.||||+++..... ....+.+|+.++..++||||+++++++...+..+||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 45678889999999999999995 46889999999754322 235688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
|||+.+++|.+++.. .+.+++..++.|+.||+.||.|||.. +||||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRH-GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999964 34588999999999999999999998 99999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=298.28 Aligned_cols=249 Identities=18% Similarity=0.232 Sum_probs=195.3
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe-----
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----- 127 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 127 (488)
..+|.++..||.|++|.||+|.. .++..||||++.... ......+.+|+.+++.++||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 34677888899999999999995 568899999987532 2234567889999999999999999988866554
Q ss_pred -eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 128 -~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...
T Consensus 94 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred cEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999998 6699999853 4699999999999999999999998 9999999999999999999999999998765
Q ss_pred CCC-CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccc-------cc---------
Q 011353 207 RDG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------TL--------- 268 (488)
Q Consensus 207 ~~~-~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------~~--------- 268 (488)
... ....++..|+|||.+.+. .++.++|||||||++|+|+||+.||+............. .+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07851 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESA 248 (343)
T ss_pred cccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhH
Confidence 433 344568889999998753 578899999999999999999988864322111000000 00
Q ss_pred ---cc---ccccCC---CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 ---TD---SCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 ---~~---~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.. ...... .....+..+.+++.+||..+|.+|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 249 RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00 000000 001236789999999999999999999999877
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=291.76 Aligned_cols=247 Identities=18% Similarity=0.234 Sum_probs=188.7
Q ss_pred ccccccCCCCCCCeEEEEEe-CC--CCEEEEEEcCCCCC--ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeC----Cee
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-EN--QFRIAVKRFNRSAW--PDARQFLEEARAVGQL-RNRRLANLLGCCCEG----DER 128 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~--~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~~~ 128 (488)
|++.+.||+|+||.||++.. .. +..||||++..... ...+.+.+|+.++..+ .||||+++++.+... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 56677889999999999994 34 78999999875321 2245688999999999 599999999875432 457
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++++||+. ++|.+++.. ...+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 82 YLYEELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSA-NVLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 88999985 589998854 45689999999999999999999998 999999999999999999999999999875432
Q ss_pred C--------CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh-----------------
Q 011353 209 G--------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD----------------- 262 (488)
Q Consensus 209 ~--------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~----------------- 262 (488)
. ....++..|+|||++.+ ..++.++|||||||++|+|++|..||..........
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 1 22357889999998876 458999999999999999999998775432110000
Q ss_pred --ccccccc---ccccc---CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 263 --RNIQTLT---DSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 263 --~~~~~~~---~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....... ..... .......+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000 00000 00111235689999999999999999999999876
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=279.40 Aligned_cols=218 Identities=20% Similarity=0.210 Sum_probs=177.5
Q ss_pred CCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHhhhcc
Q 011353 68 KAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 146 (488)
Q Consensus 68 G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~ 146 (488)
|.+|.||++. ..+++.||+|.++... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 7899999999 5678999999997543 233455555566799999999999999999999999999999999865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-CccccCCCCCCccccc
Q 011353 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLR 225 (488)
Q Consensus 147 ~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~ 225 (488)
...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++++|||.+...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHRE-GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 34589999999999999999999998 9999999999999999999999999987655433 2334567899999998
Q ss_pred cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCCh
Q 011353 226 TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303 (488)
Q Consensus 226 ~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 303 (488)
+..++.++||||+|+++|||++|..|+...... . . ....-..+...+..+.+++.+||+.||++||++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~-----~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG-I-----N----THTTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c-----c----cccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 888999999999999999999999765422111 0 0 000112333456789999999999999999996
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=310.30 Aligned_cols=248 Identities=21% Similarity=0.304 Sum_probs=201.5
Q ss_pred ccCCCCCCCeEEEEEeC--------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEE
Q 011353 63 SEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 132 (488)
+.||+|.||.|++|... ....||||.++.... ...+.+..|+.+|+.+ +|+||+.++|+|...+..++|+
T Consensus 302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~ 381 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV 381 (609)
T ss_pred ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence 46799999999999832 145799999986543 3466799999999999 6999999999999999999999
Q ss_pred ecCCCCCHHhhhccCC------C--------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeee
Q 011353 133 EYMPNDTLAKHLFHWE------T--------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS 198 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 198 (488)
||+..|+|.++|+..+ . ..++....+.+++||+.||+||+++ ++|||||...|||+..+..+||+
T Consensus 382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~-~~vHRDLAaRNVLi~~~~~~kIa 460 (609)
T KOG0200|consen 382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV-PCVHRDLAARNVLITKNKVIKIA 460 (609)
T ss_pred EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC-CccchhhhhhhEEecCCCEEEEc
Confidence 9999999999997644 0 1388899999999999999999999 89999999999999999999999
Q ss_pred cCCCccccCCCCccc-----c--CCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccc
Q 011353 199 CFGLMKNSRDGRSYS-----T--NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 271 (488)
Q Consensus 199 DfGla~~~~~~~~~~-----~--~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 271 (488)
|||+++.......+. + ...|||||.+....++.++|||||||+||||+|...+|..... ....+...+..
T Consensus 461 DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~---~~~~l~~~l~~ 537 (609)
T KOG0200|consen 461 DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP---PTEELLEFLKE 537 (609)
T ss_pred cccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC---cHHHHHHHHhc
Confidence 999999655433221 1 3459999999998999999999999999999995544433210 00011112223
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
..+...|..++.++.++|..||+.+|++||++.++...+....
T Consensus 538 G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 538 GNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 3333455667889999999999999999999999999998853
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=270.75 Aligned_cols=252 Identities=17% Similarity=0.230 Sum_probs=195.0
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC--CCccHHHHHHHHHHHhccCCCCcccEEEEEee--------C
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCE--------G 125 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~ 125 (488)
+.|..+.++|+|.||.||+|. .++|+.||+|++-.. ..+.....++|+.+|..|+|+|++.++.+|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 456677888999999999999 556888999987542 22335567899999999999999999988753 2
Q ss_pred CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 126 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
..+++||.+|+. +|..+|.+ ....++...+.+++.++..||.|+|+. .|+|||+||.|+||+.+|.+||+|||+++.
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~-kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRN-KILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHh-hHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 448999999987 79998865 335699999999999999999999998 999999999999999999999999999976
Q ss_pred cCCC--------CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHH-------Hhhccccccc
Q 011353 206 SRDG--------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDL-------IRDRNIQTLT 269 (488)
Q Consensus 206 ~~~~--------~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-------~~~~~~~~~~ 269 (488)
+... +....|..|++||.+.|.. ++++.|||+.|||+.||+||.+.+.+..... .......+.+
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW 253 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence 5433 2234589999999999854 9999999999999999999997776542211 0011011110
Q ss_pred cc--------------cccCCC--------ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 270 DS--------------CLEGQF--------SSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 270 ~~--------------~~~~~~--------~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
+. ...+.+ |-.-..+..+|+..++..||.+|+++.++++|--
T Consensus 254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 00 000000 0112357899999999999999999999999843
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=293.57 Aligned_cols=247 Identities=15% Similarity=0.200 Sum_probs=201.5
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEee-----CCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE-----GDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~-----~~~~~l 130 (488)
..+++..+|.|.+|.||+++ ..+++.+|||++...... .++...|..+|+.+ .|||++.++|++.- ++.++|
T Consensus 20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL 98 (953)
T KOG0587|consen 20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL 98 (953)
T ss_pred ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence 34566777999999999999 778999999999866533 35677888999988 69999999999853 577999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~-- 208 (488)
|||||.|||..|+++...+..+.|..+..|++.++.||.+||.. .+||||||-.|||++.++.|||.|||.+.....
T Consensus 99 VMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n-kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~ 177 (953)
T KOG0587|consen 99 VMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV 177 (953)
T ss_pred EeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc-ceeeecccCceEEEeccCcEEEeeeeeeeeeeccc
Confidence 99999999999999876777899999999999999999999998 999999999999999999999999998765443
Q ss_pred --CCccccCCCCCCcccccc-----CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 209 --GRSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 209 --~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..+..||+.|||||++.- ..|+.++|+||||++..||--|.+|+...- +...-..+..- +...-.-+...
T Consensus 178 grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH-PmraLF~IpRN--PPPkLkrp~kW 254 (953)
T KOG0587|consen 178 GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRN--PPPKLKRPKKW 254 (953)
T ss_pred ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc-hhhhhccCCCC--CCccccchhhH
Confidence 245678999999999962 347889999999999999999986654321 11110111111 11111235668
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+..+.++|..||.+|.++||++.++++|
T Consensus 255 s~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 255 SKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred HHHHHHHHHHHHhhccccCcchhhhccC
Confidence 8999999999999999999999999876
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-36 Score=276.26 Aligned_cols=248 Identities=21% Similarity=0.279 Sum_probs=195.0
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC-CCcc------HHHHHHHHHHHhccCCCCcccEEEEEee-CCee
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS-AWPD------ARQFLEEARAVGQLRNRRLANLLGCCCE-GDER 128 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~------~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 128 (488)
+|-++..||+|+|+.||++. +...+.||||+-... ++.+ .+...+|.++.+.|+||.||+++++|.- .+.+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 34466788999999999999 666889999986432 2222 2346789999999999999999999964 4568
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCcccccccCcceee---CCCCCeeeecCCCcc
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVF---DDDVNPRLSCFGLMK 204 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill---~~~~~~kl~DfGla~ 204 (488)
|-|+|||+|.+|+-+|+. .+.+++..+..|+.||+.||.||.+. ..|||-||||.|||+ +..|.+||+|||+++
T Consensus 544 CTVLEYceGNDLDFYLKQ--hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK 621 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQ--HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK 621 (775)
T ss_pred eeeeeecCCCchhHHHHh--hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence 899999999999999975 44689999999999999999999875 579999999999999 356889999999999
Q ss_pred ccCCCC-----------ccccCCCCCCccccccC----CCCCCccchhhHHHHHHHHhCCCCCCchhh--HHHhhccccc
Q 011353 205 NSRDGR-----------SYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNIQT 267 (488)
Q Consensus 205 ~~~~~~-----------~~~~~~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~~~~~~ 267 (488)
.+.+.+ -..||++|++||.+.-+ +.+.++||||.|||+|+.+.|+.||..... +.+....+..
T Consensus 622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk 701 (775)
T KOG1151|consen 622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK 701 (775)
T ss_pred hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc
Confidence 876543 23579999999988644 378899999999999999999999865422 2222222222
Q ss_pred cccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...... ...+.++.++..||.+||++.-++|....++..+
T Consensus 702 AtEVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 702 ATEVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred ceeccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 111111 1123467889999999999999999887776654
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=255.92 Aligned_cols=258 Identities=19% Similarity=0.264 Sum_probs=204.4
Q ss_pred ccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEE
Q 011353 43 EYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLG 120 (488)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~ 120 (488)
-++++.......+-++|++++++|+|.++.||.|. ..+++.++||+++... .+.+.+|+.+|..|+ ||||+++++
T Consensus 24 YWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~D 100 (338)
T KOG0668|consen 24 YWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLD 100 (338)
T ss_pred hcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhh
Confidence 35666666667778899999999999999999999 6678899999998543 467899999999996 999999999
Q ss_pred EEeeCC--eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-CCCeee
Q 011353 121 CCCEGD--ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRL 197 (488)
Q Consensus 121 ~~~~~~--~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl 197 (488)
+..++. ...+|+||+.+.+...+. ..++...+..++.+++.||.|+|+. ||+|||+||.|++||. ...++|
T Consensus 101 iV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~-GImHRDVKPhNvmIdh~~rkLrl 174 (338)
T KOG0668|consen 101 IVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSM-GIMHRDVKPHNVMIDHELRKLRL 174 (338)
T ss_pred hhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhc-CcccccCCcceeeechhhceeee
Confidence 997754 468999999997776665 3478888999999999999999999 9999999999999984 456999
Q ss_pred ecCCCccccCCCCcc---ccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhh--H-HHh---------
Q 011353 198 SCFGLMKNSRDGRSY---STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL--D-LIR--------- 261 (488)
Q Consensus 198 ~DfGla~~~~~~~~~---~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~-~~~--------- 261 (488)
+|+|+|.+...+..+ ..+..|.-||.+.. ..++.+-|+|||||++..|+..+.||+.... + ..+
T Consensus 175 IDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~e 254 (338)
T KOG0668|consen 175 IDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDE 254 (338)
T ss_pred eecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHH
Confidence 999999987776554 34678999999976 4589999999999999999999999864310 0 000
Q ss_pred ------------hccccccccc--------cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 262 ------------DRNIQTLTDS--------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 262 ------------~~~~~~~~~~--------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+.....++.. ........-.++++.+|+.+.|..|-.+|+|++|.+.|
T Consensus 255 l~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 255 LYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 0001110000 00111112235889999999999999999999999987
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=271.58 Aligned_cols=251 Identities=18% Similarity=0.225 Sum_probs=191.4
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc--CCCCcccEEEEEeeCC----eeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL--RNRRLANLLGCCCEGD----ERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~~----~~~lv 131 (488)
...+++.+|+|.||.||+|.+ .|+.||||++... +.+.+.+|.++.+.+ +|+||+.+++.-..+. +++||
T Consensus 212 qI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred eeEEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence 345678889999999999999 4568999999743 356678888888765 9999999998754432 47999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
++|.+.|||.|||.+ ..++....++++..++.||++||.. +.|.|||||..|||+..++.+.|+|+|||.
T Consensus 288 TdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 288 TDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred eecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 999999999999954 5699999999999999999999973 569999999999999999999999999997
Q ss_pred ccCCC--------CccccCCCCCCccccccCC----C-CC-CccchhhHHHHHHHHhCC----------CCCCch-----
Q 011353 205 NSRDG--------RSYSTNLAFTPPEYLRTGR----V-TP-ESVMYSFGTLLLDLLSGK----------HIPPSH----- 255 (488)
Q Consensus 205 ~~~~~--------~~~~~~~~y~aPE~~~~~~----~-~~-~~Dv~slG~~l~el~tg~----------~p~~~~----- 255 (488)
..... ....||.+|||||++...- + +. .+||||||.|+||+..+- .||.+-
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 65543 3457899999999997432 2 22 589999999999997633 233221
Q ss_pred hhHHHhhcc-ccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 256 ALDLIRDRN-IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 256 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
..+.+..-. ...+-+.....-........+.++|..||..+|.-|-|+=-|.+.|.++..
T Consensus 445 s~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 445 SFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 111111111 111111111111123456789999999999999999999999999888875
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=280.44 Aligned_cols=248 Identities=17% Similarity=0.179 Sum_probs=191.5
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEE
Q 011353 46 IETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGC 121 (488)
Q Consensus 46 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~ 121 (488)
+-.+.++.-+-+.+-.|+-||-|+||.|.++. .++...+|+|.+++.+.- .....+.|-+||..-+.+.||+|+-.
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 33344444444556678889999999999999 556778999999764321 23346779999999999999999999
Q ss_pred EeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCC
Q 011353 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (488)
Q Consensus 122 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfG 201 (488)
|.+.+.+|+||+|++||++-++|.+ .+.|.+..+..++.++..|+++.|.. |+|||||||+|||||.+|++||+|||
T Consensus 698 FQDkdnLYFVMdYIPGGDmMSLLIr--mgIFeE~LARFYIAEltcAiesVHkm-GFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 698 FQDKDNLYFVMDYIPGGDMMSLLIR--MGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred eccCCceEEEEeccCCccHHHHHHH--hccCHHHHHHHHHHHHHHHHHHHHhc-cceecccCccceEEccCCceeeeecc
Confidence 9999999999999999999999975 56799999999999999999999999 99999999999999999999999999
Q ss_pred CccccCC---------C-------------------------------------CccccCCCCCCccccccCCCCCCccc
Q 011353 202 LMKNSRD---------G-------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVM 235 (488)
Q Consensus 202 la~~~~~---------~-------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv 235 (488)
|+..+.- + ...+||+.|+|||++....++..+|.
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 9864320 0 02357899999999999999999999
Q ss_pred hhhHHHHHHHHhCCCCCCchhhH--HHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCC
Q 011353 236 YSFGTLLLDLLSGKHIPPSHALD--LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301 (488)
Q Consensus 236 ~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 301 (488)
||.|||||||+.|+.||.....- ..+...+...++-. +..+.+.+..++|.+++ .+++.|.
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~----~~~~ls~e~~~li~kLc-~sad~RL 917 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIP----YQGNLSKEALDLIQKLC-CSADSRL 917 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccc----cccccCHHHHHHHHHHh-cChhhhh
Confidence 99999999999999988543211 01111222222221 22334566677766544 3566664
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=296.83 Aligned_cols=250 Identities=18% Similarity=0.195 Sum_probs=166.9
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CC----CCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEE------Ee
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-EN----QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC------CC 123 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~~ 123 (488)
...+|.+.+.||+|+||.||+|.. .+ +..||||++..... .+.+..+ .+....+.+++.++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 456778888999999999999995 45 78999999864331 1112221 1122222222222211 24
Q ss_pred eCCeeEEEEecCCCCCHHhhhccCCCC------------------CCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCc
Q 011353 124 EGDERLLVAEYMPNDTLAKHLFHWETQ------------------PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185 (488)
Q Consensus 124 ~~~~~~lv~E~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~ 185 (488)
.....++||||+.+++|.+++...... ......+..++.||+.||.|||+. +|+||||||+
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~-gIiHRDLKP~ 284 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST-GIVHRDVKPQ 284 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC-CEEeCcCCHH
Confidence 566789999999999999998642110 012334668999999999999998 9999999999
Q ss_pred ceeeCC-CCCeeeecCCCccccCCC-----CccccCCCCCCccccccC----------------------CCCCCccchh
Q 011353 186 RIVFDD-DVNPRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTG----------------------RVTPESVMYS 237 (488)
Q Consensus 186 Nill~~-~~~~kl~DfGla~~~~~~-----~~~~~~~~y~aPE~~~~~----------------------~~~~~~Dv~s 237 (488)
|||++. ++.+||+|||+++..... ....+++.|+|||.+... .++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999985 689999999999865432 345678999999966432 2344679999
Q ss_pred hHHHHHHHHhCCCCCCchhhHHHh---hc--ccc---ccccccccCC------CChHHHHHHHHHHHHhccCCCCCCCCh
Q 011353 238 FGTLLLDLLSGKHIPPSHALDLIR---DR--NIQ---TLTDSCLEGQ------FSSDEGTELVRLASRCLQYEPRERPNP 303 (488)
Q Consensus 238 lG~~l~el~tg~~p~~~~~~~~~~---~~--~~~---~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rps~ 303 (488)
|||+||||+++..++......... .. ... .......... ..........+|+.+||+.||++|||+
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta 444 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISA 444 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCH
Confidence 999999999987554432211111 00 000 0000000000 000112345689999999999999999
Q ss_pred HHHHHH
Q 011353 304 RSLVTA 309 (488)
Q Consensus 304 ~~il~~ 309 (488)
.++++|
T Consensus 445 ~e~L~H 450 (566)
T PLN03225 445 KAALAH 450 (566)
T ss_pred HHHhCC
Confidence 999987
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=244.51 Aligned_cols=198 Identities=17% Similarity=0.200 Sum_probs=167.2
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC-CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecC
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..-+.+||+|++|.|-+.+ ..+|...|+|.+...- .+...+.++|+.+..+. ..|++|+++|.......++|.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 3455778999999999998 5789999999998653 23355688888876666 7999999999999999999999999
Q ss_pred CCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---C
Q 011353 136 PNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R 210 (488)
Q Consensus 136 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~ 210 (488)
.. ||+.+-.. ..++.+++..+-+|+..+..||.|||++..+||||+||+||||+.+|++|++|||++....+. +
T Consensus 128 ~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt 206 (282)
T KOG0984|consen 128 DT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT 206 (282)
T ss_pred hh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH
Confidence 65 78877653 245679999999999999999999999888999999999999999999999999998766554 2
Q ss_pred ccccCCCCCCcccccc----CCCCCCccchhhHHHHHHHHhCCCCCCchhh
Q 011353 211 SYSTNLAFTPPEYLRT----GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL 257 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 257 (488)
...|-..|||||.+.. ..|+.+|||||||++++||.+++.|++....
T Consensus 207 ~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 207 MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 2456788999998864 3589999999999999999999988765543
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=261.74 Aligned_cols=235 Identities=21% Similarity=0.246 Sum_probs=192.6
Q ss_pred CCCeEEEEEeC-CCCEEEEEEcCCCCCcc-HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHhhhcc
Q 011353 69 APNVVYKGKLE-NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 146 (488)
Q Consensus 69 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~ 146 (488)
+||.||+|... +++.+++|++....... .+.+.+|++.+++++|+||+++++.+......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 47899999964 58899999998665444 67899999999999999999999999999999999999999999999965
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---CccccCCCCCCccc
Q 011353 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEY 223 (488)
Q Consensus 147 ~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~~~~~~~~y~aPE~ 223 (488)
.. .+++..+..++.+++.+|.|||+. +++|+||+|.||++++++.++|+|||.+...... ....++..|++||.
T Consensus 81 ~~--~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 RG--RLSEDEARFYARQILSALEYLHSN-GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred cc--CCCHHHHHHHHHHHHHHHHHHHHc-CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 22 389999999999999999999998 9999999999999999999999999998876553 34556789999999
Q ss_pred cccCCCCCCccchhhHHHHHHHHhCCCCCCc-hhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCC
Q 011353 224 LRTGRVTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302 (488)
Q Consensus 224 ~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 302 (488)
+.+..++.++||||||+++++|++|..|+.. ................. .......+..+.+++.+||..+|++||+
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 234 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF---PPPEWKISPEAKDLIRKLLVKDPEKRLT 234 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC---ccccccCCHHHHHHHHHHccCCchhccC
Confidence 9988899999999999999999999988765 22221111111110000 0000014578999999999999999999
Q ss_pred hHHHHHH
Q 011353 303 PRSLVTA 309 (488)
Q Consensus 303 ~~~il~~ 309 (488)
+.+++++
T Consensus 235 ~~~~~~~ 241 (244)
T smart00220 235 AEEALQH 241 (244)
T ss_pred HHHHhhC
Confidence 9999874
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=280.82 Aligned_cols=252 Identities=15% Similarity=0.163 Sum_probs=177.3
Q ss_pred CcccccccCCCCCCCeEEEEEe-----------------CCCCEEEEEEcCCCCCccHHHH--------------HHHHH
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-----------------ENQFRIAVKRFNRSAWPDARQF--------------LEEAR 105 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~e~~ 105 (488)
++|.+.++||+|+||+||+|.. ..++.||||+++.......++| ..|+.
T Consensus 145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~ 224 (507)
T PLN03224 145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY 224 (507)
T ss_pred cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence 4566777789999999999963 2356899999875433222333 34667
Q ss_pred HHhccCCCCc-----ccEEEEEee--------CCeeEEEEecCCCCCHHhhhccCC----------------------CC
Q 011353 106 AVGQLRNRRL-----ANLLGCCCE--------GDERLLVAEYMPNDTLAKHLFHWE----------------------TQ 150 (488)
Q Consensus 106 ~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~E~~~~gsL~~~l~~~~----------------------~~ 150 (488)
.+.+++|.++ ++++++|.. .+..++||||+++++|.++++... ..
T Consensus 225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~ 304 (507)
T PLN03224 225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQD 304 (507)
T ss_pred HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccc
Confidence 7777766544 677777753 356899999999999999986421 11
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----ccccCCCCCCccccc
Q 011353 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SYSTNLAFTPPEYLR 225 (488)
Q Consensus 151 ~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-----~~~~~~~y~aPE~~~ 225 (488)
.+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++....... ...+++.|+|||.+.
T Consensus 305 ~~~~~~~~~i~~ql~~aL~~lH~~-~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 305 KRDINVIKGVMRQVLTGLRKLHRI-GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV 383 (507)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence 246778899999999999999998 99999999999999999999999999987654322 123378999999986
Q ss_pred cCCC----------------------CCCccchhhHHHHHHHHhCCCCCCchhh---HHHhh--cccc---ccccccccC
Q 011353 226 TGRV----------------------TPESVMYSFGTLLLDLLSGKHIPPSHAL---DLIRD--RNIQ---TLTDSCLEG 275 (488)
Q Consensus 226 ~~~~----------------------~~~~Dv~slG~~l~el~tg~~p~~~~~~---~~~~~--~~~~---~~~~~~~~~ 275 (488)
.... ..+.||||+||++++|++|..++..... ..... .... ........-
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~ 463 (507)
T PLN03224 384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDF 463 (507)
T ss_pred CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCc
Confidence 4321 1347999999999999999853322110 00000 0000 000000000
Q ss_pred CCChHHHHHHHHHHHHhccCCC---CCCCChHHHHHH
Q 011353 276 QFSSDEGTELVRLASRCLQYEP---RERPNPRSLVTA 309 (488)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~~p---~~Rps~~~il~~ 309 (488)
......+....+|+.++|..+| .+|+|+.++++|
T Consensus 464 ~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 464 SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 1122356789999999999876 689999999987
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=260.90 Aligned_cols=243 Identities=17% Similarity=0.237 Sum_probs=197.4
Q ss_pred CCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
+..+++++..||+|+|..|..+. ..+.+.+|+|++++... .+..-...|-.+..+- +||.+|-+..+|.....++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 35677788888999999999999 56788999999986432 3344466777777777 6999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC--
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-- 207 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~-- 207 (488)
+|.||++||+|--++.+ .+.++++.+..+..+|+.||.|||+. |||+||||..|||+|..|++||+|+|+++..-
T Consensus 328 fvieyv~ggdlmfhmqr--qrklpeeharfys~ei~lal~flh~r-giiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEICLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEEecCcceeeehhh--hhcCcHHHhhhhhHHHHHHHHHHhhc-CeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 99999999999877754 45699999999999999999999999 99999999999999999999999999987532
Q ss_pred --CCCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH----HhhccccccccccccCCCChHH
Q 011353 208 --DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----IRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 208 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..++..||+.|+|||.+.+..|..+.|.|+|||+++||+.|+.||.--..+. ..+..++.++... -.+|...
T Consensus 405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq--iriprsl 482 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ--IRIPRSL 482 (593)
T ss_pred CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc--cccccee
Confidence 2356789999999999999999999999999999999999999985211110 1111112222211 1345556
Q ss_pred HHHHHHHHHHhccCCCCCCCC
Q 011353 282 GTELVRLASRCLQYEPRERPN 302 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps 302 (488)
+..+..++..-|.+||.+|..
T Consensus 483 svkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 483 SVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred ehhhHHHHHHhhcCCcHHhcC
Confidence 777889999999999999953
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=262.45 Aligned_cols=132 Identities=16% Similarity=0.185 Sum_probs=115.4
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-----C---CCcccEEEEEee---
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----N---RRLANLLGCCCE--- 124 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~--- 124 (488)
.+|-++++||-|.|++||++. ..+.+.||+|+.+... .-.+..+.||.+|++++ | .+||+|++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 478899999999999999999 6778899999987432 33556788999999994 3 369999999965
Q ss_pred -CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC
Q 011353 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190 (488)
Q Consensus 125 -~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~ 190 (488)
+.+++||+|++ |.+|..+|....-+.++...+..|++||+.||.|||.++||||.||||+|||+.
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 46899999999 779999998877778999999999999999999999999999999999999993
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=283.26 Aligned_cols=240 Identities=21% Similarity=0.222 Sum_probs=181.9
Q ss_pred CCcccccccCCCCCCCe-EEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEe
Q 011353 56 FAMENIVSEHGEKAPNV-VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 133 (488)
|+..+++ |.|+-|+ ||+|.. .|+.||||++-... .....+|+..|+.- .|||||++++.-.+.++.||..|
T Consensus 511 ~~~~eil---G~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEIL---GYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHc---ccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 4444454 7777764 799998 56699999986433 34568999999999 69999999999999999999999
Q ss_pred cCCCCCHHhhhccC-CCCC-CCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC---C--CCeeeecCCCcccc
Q 011353 134 YMPNDTLAKHLFHW-ETQP-MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---D--VNPRLSCFGLMKNS 206 (488)
Q Consensus 134 ~~~~gsL~~~l~~~-~~~~-l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~--~~~kl~DfGla~~~ 206 (488)
.|.. ||.+++... .... ......+.+..|++.||++||+. +||||||||.||||+. + .+++|+|||+++..
T Consensus 584 LC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl-~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 584 LCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL-KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred Hhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc-ccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 9966 999999652 1111 11134578899999999999997 9999999999999964 3 46999999999876
Q ss_pred CCC-------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhC-CCCCCchhhHHHhhccccccccccccCCCC
Q 011353 207 RDG-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-KHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 207 ~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
..+ ....||-+|+|||++....-+..+||||+|||+|+.++| .+||....... .++..-......-...
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~---~NIl~~~~~L~~L~~~ 738 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ---ANILTGNYTLVHLEPL 738 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh---hhhhcCccceeeeccC
Confidence 544 234679999999999988888899999999999999998 55665432211 1110000000000001
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.++ ++.+||.+|+..+|..||++.+|+.|
T Consensus 739 ~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 739 PDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred chH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 111 89999999999999999999999987
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=254.29 Aligned_cols=245 Identities=18% Similarity=0.263 Sum_probs=188.0
Q ss_pred ccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeC-----CeeEEEEec
Q 011353 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERLLVAEY 134 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~E~ 134 (488)
+-||.|+||.||.++ -++|+.||+|++.... ....+++.+|+.+|..++|.|++..+++..-. ..+|+|+|.
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 445999999999999 5679999999986432 22356788999999999999999998876543 346889999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
|.. +|...|-. .+.++...+.-+.+||++||+|||+. +|+||||||.|.|++++..+||+|||+++......
T Consensus 139 mQS-DLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA-~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM 214 (449)
T KOG0664|consen 139 MQS-DLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTA-NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM 214 (449)
T ss_pred HHh-hhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhc-chhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence 955 78888853 56799999999999999999999998 99999999999999999999999999998755432
Q ss_pred -ccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCch----hhHHHh---------------hccccccc
Q 011353 211 -SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH----ALDLIR---------------DRNIQTLT 269 (488)
Q Consensus 211 -~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~----~~~~~~---------------~~~~~~~~ 269 (488)
....|..|+|||.+.|.. |+...||||.||++.||+.++..|... ..+.+. ++-...++
T Consensus 215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~L 294 (449)
T KOG0664|consen 215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVL 294 (449)
T ss_pred HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhh
Confidence 234578999999999865 999999999999999999888766432 111110 01111111
Q ss_pred ccccc-CC--------CChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 270 DSCLE-GQ--------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 270 ~~~~~-~~--------~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
..... .. .+.....+...+...++..||+.|.+..+.+.++.
T Consensus 295 R~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 295 RAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred ccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 10000 00 11123356778889999999999999999988854
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-33 Score=273.00 Aligned_cols=248 Identities=16% Similarity=0.181 Sum_probs=204.8
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.+|+++.++|.|++|.|||++ ..++...|||+++.....+..-..+|+-+++.++|||||.++|.+...+..+|+||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 578888999999999999999 6789999999999877777777889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC----CCCc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----DGRS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~----~~~~ 211 (488)
.||+|.+.-+ ..+++++.++..++++.++||+|||+. |-+|||||-.|||+++.|.+|++|||.+.... ....
T Consensus 95 gggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~-gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks 171 (829)
T KOG0576|consen 95 GGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQ-GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS 171 (829)
T ss_pred CCCcccceee--ecccchhHHHHHHHhhhhccchhhhcC-CcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence 9999999765 367899999999999999999999999 99999999999999999999999999876543 3467
Q ss_pred cccCCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCc-hhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 212 ~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
..||+.|||||+.. .+.|...+|||+.|+...|+---+.|.+. +......--. ....++.. -.-+...++.|.+
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT-kS~~qpp~-lkDk~kws~~fh~ 249 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT-KSGFQPPT-LKDKTKWSEFFHN 249 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh-ccCCCCCc-ccCCccchHHHHH
Confidence 78999999999875 46699999999999999999877754332 1111111001 11111111 1123346788999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
|+..|+.++|.+|||+..+++|
T Consensus 250 fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 250 FVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred HHHHHhcCCCccCCChhhheec
Confidence 9999999999999999988775
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-32 Score=246.66 Aligned_cols=245 Identities=17% Similarity=0.212 Sum_probs=191.2
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC--CCccHHHHHHHHHHHhccCCCCcccEEEEEeeC------Cee
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DER 128 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 128 (488)
+|.-++.+|.|.- .|..+. .-.++.||+|++... .....++..+|..++..+.|+||++++.+|+-. ...
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 3444566688876 555555 345889999998643 334567788999999999999999999999654 347
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
|+|||||.. +|...+. -.++-.++..|..|++.|++|||+. ||+||||||+||++..+..+||.|||+|+....
T Consensus 97 y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~-~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 97 YLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHSA-GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred HHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc-ceeecccCcccceecchhheeeccchhhcccCc
Confidence 999999955 8999885 3477788999999999999999999 999999999999999999999999999987655
Q ss_pred C---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh-hHHHh-----------------------
Q 011353 209 G---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIR----------------------- 261 (488)
Q Consensus 209 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~----------------------- 261 (488)
. +.+..|..|.|||++.+-.+...+||||+||++.||++|...|++.. .+.+.
T Consensus 171 ~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~ 250 (369)
T KOG0665|consen 171 DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRN 250 (369)
T ss_pred ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHH
Confidence 4 55678899999999998889999999999999999999998887541 00000
Q ss_pred ---------hcccccccccc-ccC--CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 262 ---------DRNIQTLTDSC-LEG--QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 262 ---------~~~~~~~~~~~-~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+...++.. ... +.++..+..+.+++.+||..+|++|.|++++|+|
T Consensus 251 yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 251 YVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00111111110 000 1112245678999999999999999999999998
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-33 Score=262.54 Aligned_cols=250 Identities=15% Similarity=0.145 Sum_probs=197.3
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC------CCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR------NRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~~~~~~~ 129 (488)
..|.+.+..|.|-||+|..|.. ..|..||||+|..... -.+.=++|+++|++|. --|+++++..|.+.+++|
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 4678888899999999999994 4477999999986532 2344578999999995 248999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC-CCeeeecCCCccccC
Q 011353 130 LVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR 207 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~DfGla~~~~ 207 (488)
||||-+ ..+|.++|...+. -.|....+..++.|++-||..|-.. ||+|.||||.|||+++. ..+||||||.|....
T Consensus 511 lVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c-~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ 588 (752)
T KOG0670|consen 511 LVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC-GVLHADIKPDNILVNESKNILKLCDFGSASFAS 588 (752)
T ss_pred EEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc-CeeecccCccceEeccCcceeeeccCccccccc
Confidence 999998 4589999976432 3578889999999999999999887 99999999999999855 568999999998766
Q ss_pred CC--CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh----------------c------
Q 011353 208 DG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD----------------R------ 263 (488)
Q Consensus 208 ~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~----------------~------ 263 (488)
.. +.+..+..|.|||++.|.+|+...|+||.||+||||.||+..||+.....+.. +
T Consensus 589 eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqH 668 (752)
T KOG0670|consen 589 ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQH 668 (752)
T ss_pred cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhh
Confidence 54 45667788999999999999999999999999999999999998753221110 0
Q ss_pred ------------------c---cccccccc------cc--CCCC---hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 264 ------------------N---IQTLTDSC------LE--GQFS---SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 264 ------------------~---~~~~~~~~------~~--~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. +...+.+. +. ..++ ......|.+|+..||..||++|.|..+.|+|
T Consensus 669 FD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 669 FDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred cccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 0 00000000 00 0112 2234678999999999999999999999887
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=235.07 Aligned_cols=207 Identities=26% Similarity=0.383 Sum_probs=183.1
Q ss_pred CCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHh
Q 011353 65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (488)
Q Consensus 65 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~ 142 (488)
||.|++|.||++... +++.+++|++...... ....+.+|+..++.++|++|+++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 589999999999964 4889999999865432 24679999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-CCCeeeecCCCccccCCC----CccccCCC
Q 011353 143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG----RSYSTNLA 217 (488)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~DfGla~~~~~~----~~~~~~~~ 217 (488)
++.... ..+++..+..++.+++.+|.+||+. +++|+||+|.||+++. ++.++|+|||.+...... ....+...
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~-~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSN-GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 996432 3589999999999999999999999 9999999999999998 899999999998866543 23456788
Q ss_pred CCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCC
Q 011353 218 FTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (488)
Q Consensus 218 y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 296 (488)
|++||.+... ..+.++|+|++|+++++| ..+.+++..|++.+
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 9999999877 788999999999999998 46899999999999
Q ss_pred CCCCCChHHHHHHH
Q 011353 297 PRERPNPRSLVTAL 310 (488)
Q Consensus 297 p~~Rps~~~il~~L 310 (488)
|.+||++.++++++
T Consensus 202 p~~R~~~~~l~~~~ 215 (215)
T cd00180 202 PEKRPSAKEILEHL 215 (215)
T ss_pred cccCcCHHHHhhCC
Confidence 99999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=243.35 Aligned_cols=251 Identities=19% Similarity=0.211 Sum_probs=196.6
Q ss_pred ccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEee-CCeeEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLL 130 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~l 130 (488)
.+....+-+|.||.||.|.+ .+.+.|-+|.++....+ ....++.|.-++..+.|||+..+.+++.+ ....++
T Consensus 286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V 365 (563)
T KOG1024|consen 286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFV 365 (563)
T ss_pred eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceE
Confidence 33445568999999999964 34566788888765433 24458889999999999999999999865 456899
Q ss_pred EEecCCCCCHHhhhc-----c-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 131 VAEYMPNDTLAKHLF-----H-WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 131 v~E~~~~gsL~~~l~-----~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
++.++.-|+|..||. + ...+.++..+...++.|++.|++|||+. ++||.||...|.+||+..++||+|-.+++
T Consensus 366 ~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~-~ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 366 LYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH-GVIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred EEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc-CcccchhhhhcceehhheeEEeccchhcc
Confidence 999999999999997 2 2234577888999999999999999998 99999999999999999999999999988
Q ss_pred ccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC
Q 011353 205 NSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 205 ~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
..-... .......||+||.+....|+..+|||||||+||||+|-...|..+..+... ...+....+-.-|
T Consensus 445 DLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm----~~ylkdGyRlaQP 520 (563)
T KOG1024|consen 445 DLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM----EHYLKDGYRLAQP 520 (563)
T ss_pred ccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH----HHHHhccceecCC
Confidence 654332 223457899999999999999999999999999999944444433222111 1111111111234
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
-+++.++..+|..||...|++||++++++.-|.+.-
T Consensus 521 ~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 521 FNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 568899999999999999999999999999887653
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-32 Score=257.60 Aligned_cols=200 Identities=15% Similarity=0.176 Sum_probs=172.6
Q ss_pred HHhcCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--------cHHHHHHHHHHHhccC---CCCcccE
Q 011353 51 TATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLR---NRRLANL 118 (488)
Q Consensus 51 ~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~---h~niv~l 118 (488)
....+|++|..++.+|.|+||.|++|. ..+...|+||.|.+...- +.-..-.||++|..|+ |+||+++
T Consensus 555 ~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 555 KEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL 634 (772)
T ss_pred eeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence 335678999999999999999999999 456778999998754211 1112556999999997 9999999
Q ss_pred EEEEeeCCeeEEEEecC-CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeee
Q 011353 119 LGCCCEGDERLLVAEYM-PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (488)
Q Consensus 119 ~~~~~~~~~~~lv~E~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 197 (488)
+++|+++++.||+||-. +|-+|.++|.. +..+++.....|++||+.|+++||+. ||||||||-+||+++.+|-+||
T Consensus 635 LdfFEddd~yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~-~ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 635 LDFFEDDDYYYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQ-GIVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred hheeecCCeeEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhcccccccc-CceecccccccEEEecCCeEEE
Confidence 99999999999999984 56799999965 44599999999999999999999999 9999999999999999999999
Q ss_pred ecCCCccccCCC--CccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCC
Q 011353 198 SCFGLMKNSRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPP 253 (488)
Q Consensus 198 ~DfGla~~~~~~--~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~ 253 (488)
+|||.+.....+ ....||..|.|||++.|.+| ...-|||++|++||-++....|++
T Consensus 712 idfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999998766554 56789999999999999887 456799999999999998887765
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=243.41 Aligned_cols=244 Identities=22% Similarity=0.277 Sum_probs=190.7
Q ss_pred cccccccCCCCCCCeEEEEEe-C---CCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-E---NQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.|.++.++|.|+|++||+++. . .++.||+|.+...+. ..++.+|+++|..+ -+.||+.+.+++...+.+.+|+
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 456778889999999999993 3 468999999987653 45688999999999 5999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC-CCCCeeeecCCCccccC----
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSR---- 207 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~DfGla~~~~---- 207 (488)
||++.-+..+++.. ++...+..+++.++.||.++|.+ |||||||||+|+|.+ ..+.-.|.|||+|....
T Consensus 115 p~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~-GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 115 PYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKN-GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred cccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhcc-CccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 99999999888843 77889999999999999999999 999999999999997 45678999999976100
Q ss_pred -------------C--C-----------------------------CccccCCCCCCccccccCC-CCCCccchhhHHHH
Q 011353 208 -------------D--G-----------------------------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLL 242 (488)
Q Consensus 208 -------------~--~-----------------------------~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l 242 (488)
. + -...||++|+|||++.... .++++||||.|||+
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 0 0 0124689999999998754 78899999999999
Q ss_pred HHHHhCCCCCCchhhHH--------------Hh-----hcc------------------cccc-ccccccCC--------
Q 011353 243 LDLLSGKHIPPSHALDL--------------IR-----DRN------------------IQTL-TDSCLEGQ-------- 276 (488)
Q Consensus 243 ~el~tg~~p~~~~~~~~--------------~~-----~~~------------------~~~~-~~~~~~~~-------- 276 (488)
+.+++++.||.....+. +. .+. +..+ ...+...+
T Consensus 269 Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~ 348 (418)
T KOG1167|consen 269 LSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI 348 (418)
T ss_pred ehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence 99999999986431110 00 000 0000 00000000
Q ss_pred CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.....+..+.+++.+|+..||.+|.|+++.|+|
T Consensus 349 ~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 349 GSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 011234579999999999999999999999987
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=229.51 Aligned_cols=193 Identities=23% Similarity=0.259 Sum_probs=169.4
Q ss_pred cccccCCCCCCCeEEEEEeCC-CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 60 NIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
.+...+|.|++|.||++...+ +..+++|.+...... ....+.+|+..+..++|+|++++++++......++++|++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~ 81 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG 81 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence 455677999999999999654 889999999876544 567799999999999999999999999998999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----Ccc
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RSY 212 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~~~ 212 (488)
++|.+++..... .+++..+..++.+++.+|.+||+. +++|+||+|.||+++.++.++|+|||++...... ...
T Consensus 82 ~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 82 GDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL-GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 999999965322 288999999999999999999998 9999999999999999999999999998876544 345
Q ss_pred ccCCCCCCcccc-ccCCCCCCccchhhHHHHHHHHhCCCCCCc
Q 011353 213 STNLAFTPPEYL-RTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254 (488)
Q Consensus 213 ~~~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 254 (488)
.++..|++||.+ ....++.++||||||+++++|++|+.||..
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 567889999998 666688899999999999999999998865
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-30 Score=222.79 Aligned_cols=241 Identities=20% Similarity=0.252 Sum_probs=186.1
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEE-EeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGC-CCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~lv~E~ 134 (488)
.|++.+.+|+|-||.+-++.+ .+...+++|-+.... ...++|.+|..----| .|.||+.-+++ |+..+..++++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 577888899999999999994 567889999998654 3467899998876667 58999987754 6777888899999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee--CCCCCeeeecCCCccccCCCCcc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF--DDDVNPRLSCFGLMKNSRDGRSY 212 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill--~~~~~~kl~DfGla~~~~~~~~~ 212 (488)
+|.|+|.+-+. ...+-+....+++.|++.||.|||++ ++||||||.+|||| .+..++||+|||+.+..+.....
T Consensus 104 aP~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHsk-nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 104 APRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSK-NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred CccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhcc-chhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 99999999884 34588888999999999999999999 99999999999999 34568999999998766554333
Q ss_pred -ccCCCCCCccccccC-----CCCCCccchhhHHHHHHHHhCCCCCCchh--------hHHHhhccccccccccccCCCC
Q 011353 213 -STNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHA--------LDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 213 -~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~tg~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
..+..|.+||++... ...+.+|||.||++++.++||..|+.... +..+..+....+++ .+
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~-----~F- 253 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK-----KF- 253 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch-----hh-
Confidence 235789999987642 26778999999999999999998775321 11222222222221 11
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...++.+..+..+-|..+|++|--..++.+.
T Consensus 254 ~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 254 NPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred cccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 1245678889999999999999555555444
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-28 Score=266.51 Aligned_cols=191 Identities=16% Similarity=0.145 Sum_probs=140.0
Q ss_pred ccCC-CCcccEEEEE-------eeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 011353 109 QLRN-RRLANLLGCC-------CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180 (488)
Q Consensus 109 ~l~h-~niv~l~~~~-------~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~ 180 (488)
.++| +||++++++| .+...+++++|++ +++|.++|... ...+++..+..++.||+.||.|||++ ||+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-gIvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ-GIVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC-Ceeec
Confidence 3445 5788888877 3334577889988 55999999642 35699999999999999999999998 99999
Q ss_pred cccCcceeeCC-------------------CCCeeeecCCCccccCCC--------------------CccccCCCCCCc
Q 011353 181 DLNAYRIVFDD-------------------DVNPRLSCFGLMKNSRDG--------------------RSYSTNLAFTPP 221 (488)
Q Consensus 181 Dlkp~Nill~~-------------------~~~~kl~DfGla~~~~~~--------------------~~~~~~~~y~aP 221 (488)
||||+||||+. ++.+|++|||+++..... ....+|+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 455677777776532110 013467889999
Q ss_pred cccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCC
Q 011353 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301 (488)
Q Consensus 222 E~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 301 (488)
|++.+..++.++|||||||+||||++|..|+.... ....... ....++. . .........++.+||+.+|.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-~~~~~~~-~~~~~~~----~-~~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-RTMSSLR-HRVLPPQ----I-LLNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-HHHHHHH-HhhcChh----h-hhcCHHHHHHHHHhCCCChhhCc
Confidence 99999999999999999999999999886544221 1111000 0111110 0 11234567889999999999999
Q ss_pred ChHHHHHH
Q 011353 302 NPRSLVTA 309 (488)
Q Consensus 302 s~~~il~~ 309 (488)
|+.+++++
T Consensus 258 s~~eil~h 265 (793)
T PLN00181 258 SMSELLQS 265 (793)
T ss_pred ChHHHhhc
Confidence 99999987
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-28 Score=212.17 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=127.8
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCccccCCC
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 217 (488)
|||.+++... +.++++..++.|+.||+.||.|||+. + ||+|||++.++.+|+ ||+++...... ..+|+.
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~-~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQ-A------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhc-C------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 6899999653 44699999999999999999999998 6 999999999999999 99988765433 367899
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhH-HHhhcccccccccccc-CCCChHHHH--HHHHHHHHhc
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLE-GQFSSDEGT--ELVRLASRCL 293 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~l~~li~~cl 293 (488)
|+|||++.+..++.++|||||||++|||+||+.||...... ................ ...+...+. .+.+++..||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999887543110 0000001111110000 011222333 6999999999
Q ss_pred cCCCCCCCChHHHHHHHHhhhc
Q 011353 294 QYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 294 ~~~p~~Rps~~~il~~L~~~~~ 315 (488)
..+|.+|||+.++++++..+..
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred hcccccccCHHHHHHHHHHHHH
Confidence 9999999999999999876643
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-28 Score=212.81 Aligned_cols=254 Identities=20% Similarity=0.288 Sum_probs=201.6
Q ss_pred CCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
+++..+++-+|.....|..|+|+++++ -+++|+++..... ..+.|..|.-.|+.+.||||..++|.|..+.++.+|.
T Consensus 188 d~~~lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 188 DVSSLNLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS 266 (448)
T ss_pred chhhhhhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence 466777888889999999999998665 4666877644322 3457999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccc-cccCcceeeCCCCCeeeecCCCccccCCCCc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 211 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~-Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 211 (488)
.||+.|||...|+...+-.++..++.+++.+|++|+.|||+...+|-| -|....++||++.+++|+ .+-+++.-....
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~g 345 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVG 345 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccc
Confidence 999999999999876665678889999999999999999998667666 799999999999988876 222232222222
Q ss_pred cccCCCCCCccccccCCC---CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRV---TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~---~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
..-.+.||+||.++..+- -.++|+|||.+++|||.|...||....... .-..+.-..++..+|+..+..+..+
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspme----cgmkialeglrv~ippgis~hm~kl 421 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME----CGMKIALEGLRVHIPPGISRHMNKL 421 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh----hhhhhhhccccccCCCCccHHHHHH
Confidence 334689999999987653 346899999999999999999886432111 1122233344556777888999999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 289 ASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
+.-|+..||.+||.+..|+-.|+.++
T Consensus 422 m~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 422 MNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHhcCCCCcCCCcceehhhHHHhc
Confidence 99999999999999999999988764
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-26 Score=218.36 Aligned_cols=257 Identities=16% Similarity=0.143 Sum_probs=198.3
Q ss_pred cccccccCCCCCCCeEEEEEeCC--CCEEEEEEcCCCCCccHHHHHHHHHHHhccCC----CCcccEEEEE-eeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLEN--QFRIAVKRFNRSAWPDARQFLEEARAVGQLRN----RRLANLLGCC-CEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~~l 130 (488)
.|.+.+.||+|+||.||++.... ...+|+|............+..|+.++..+.. +++..+++.+ ......+|
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 78899999999999999999544 35799999876543333368889999999863 6899999999 57788999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC-----CCeeeecCCCccc
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-----VNPRLSCFGLMKN 205 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-----~~~kl~DfGla~~ 205 (488)
||+.+ |.+|.++......+.++..++..|+.|++.+|++||+. |++||||||.|++++.. ..+.|.|||+++.
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~-G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK-GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc-CcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 99998 88999988665557799999999999999999999999 99999999999999754 4699999999982
Q ss_pred cC---C-------C----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccc
Q 011353 206 SR---D-------G----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 271 (488)
Q Consensus 206 ~~---~-------~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 271 (488)
.. . . ....||..|.++....+...+.+.|+||++.++.+++.|..|+......... .........
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~-~~~~~~~~~ 255 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK-SKFEKDPRK 255 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH-HHHHHHhhh
Confidence 11 1 1 1234899999999999999999999999999999999998776432211000 000011000
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
..........+..+.++...+-..+...+|....+...|.......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 256 LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 0000012224567888888888899999999999999988776543
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-26 Score=196.68 Aligned_cols=256 Identities=16% Similarity=0.158 Sum_probs=202.6
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
..|+++++||.|+||.+|.|. ..+|..||||.-+... ...++..|..+.+.|+ ...|+.+..++.+..+-.+||+.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 468899999999999999999 7789999999976544 2346788999999997 47899999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC---CCeeeecCCCccccCCC--
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~DfGla~~~~~~-- 209 (488)
. |.||.+++.- ..+.++..+++-++-|++.-++|+|.+ ++|||||||+|+|..-+ ..+.++|||+++...+.
T Consensus 93 L-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r-~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 93 L-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLR-NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred c-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhh-ccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 9 8899998854 345699999999999999999999999 99999999999999643 45889999999875443
Q ss_pred ---------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccc---cccCCC
Q 011353 210 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS---CLEGQF 277 (488)
Q Consensus 210 ---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~ 277 (488)
+...||..|.+-....+...+.+.|+-|+|.+|..+.-|..|+.+-... .+.+....+... ......
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~-tk~QKyEkI~EkK~s~~ie~L 248 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA-TKKQKYEKISEKKMSTPIEVL 248 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh-hHHHHHHHHHHhhcCCCHHHH
Confidence 3456788999988888888899999999999999999999887653211 111111111111 111111
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
-...|.++.-.+..|-...-++-|...-+.+.+.-+.....
T Consensus 249 C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln 289 (341)
T KOG1163|consen 249 CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN 289 (341)
T ss_pred hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence 23356789999999999999999999888888777765543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-25 Score=198.17 Aligned_cols=253 Identities=17% Similarity=0.173 Sum_probs=200.4
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.|++-++||+|+||.++.|+ +-++++||||.-...+ ...++..|....+.| ..++|+.++-+..++.+-.||+|++
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 46778899999999999999 7789999999976543 345677888888888 5799999999999998999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC-----CCeeeecCCCccccCCC-
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-----VNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-----~~~kl~DfGla~~~~~~- 209 (488)
|.||.|++ ++.++.|+..++.-++.|++.-++|+|++ .+|+|||||+|+||..- ..+.++|||+|+...+.
T Consensus 107 -GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k-~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 107 -GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEK-DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred -CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhc-ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 88999987 45677899999999999999999999999 99999999999999643 35899999999876543
Q ss_pred ----------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh--hccccccccccccCCC
Q 011353 210 ----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR--DRNIQTLTDSCLEGQF 277 (488)
Q Consensus 210 ----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~ 277 (488)
++..||-.||+-....|...+.+.|+-|||-|+...+-|..||.+.-.+..+ ...+-+-.........
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~L 263 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVL 263 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHH
Confidence 3557899999999999999999999999999999999999888653221111 0111100000000111
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
-...+.++...+...-..+-.+-|...-+...+..+..
T Consensus 264 c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 264 CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 22356788899999999999999998877776666543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-25 Score=212.11 Aligned_cols=156 Identities=15% Similarity=-0.003 Sum_probs=121.6
Q ss_pred cccccccCCCCCCCeEEEEEeC--CCCEEEEEEcCCCC-----CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.|.+.+.||+|+||+||+|... +++.||||++.... ......|.+|+++|+.++|+|++..+.. .+..++
T Consensus 19 ~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~L 95 (365)
T PRK09188 19 RFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGL 95 (365)
T ss_pred CceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEE
Confidence 4667777899999999999853 57778999875331 1124568999999999999999853322 245799
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccc-cCcceeeCCCCCeeeecCCCccccCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL-NAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dl-kp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
||||++|++|.. +. . .. ...++.|++.+|.|||+. ||+|||| ||+|||++.++.+||+|||+++.....
T Consensus 96 VmE~~~G~~L~~-~~---~--~~---~~~~~~~i~~aL~~lH~~-gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 96 VRGWTEGVPLHL-AR---P--HG---DPAWFRSAHRALRDLHRA-GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRR 165 (365)
T ss_pred EEEccCCCCHHH-hC---c--cc---hHHHHHHHHHHHHHHHHC-CCeeCCCCCcceEEEcCCCCEEEEECccceecccC
Confidence 999999999973 21 1 11 146789999999999998 9999999 999999999999999999999865433
Q ss_pred C------------ccccCCCCCCcccccc
Q 011353 210 R------------SYSTNLAFTPPEYLRT 226 (488)
Q Consensus 210 ~------------~~~~~~~y~aPE~~~~ 226 (488)
. ...+++.|+|||.+.-
T Consensus 166 ~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 166 GALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 2 2345678999999863
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.4e-23 Score=199.97 Aligned_cols=247 Identities=22% Similarity=0.262 Sum_probs=193.3
Q ss_pred ccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCC-CcccEEEEEeeCCeeEEEEec
Q 011353 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~E~ 134 (488)
|.++..||.|+||.||++... ..+++|.+...... ....+.+|+.++..+.|+ +|+++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 456778899999999999976 68999999765433 256799999999999888 799999999877778999999
Q ss_pred CCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-CeeeecCCCccccCC----
Q 011353 135 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD---- 208 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~DfGla~~~~~---- 208 (488)
+.++++.+++..... ..++......+..|++.++.|+|+. +++|||+||+||+++..+ .++++|||+++....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~-~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK-GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999977754221 2688999999999999999999999 999999999999999888 799999999875432
Q ss_pred ------CCccccCCCCCCcccccc---CCCCCCccchhhHHHHHHHHhCCCCCCchhh----HHHhhccccccccccccC
Q 011353 209 ------GRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEG 275 (488)
Q Consensus 209 ------~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~ 275 (488)
.....++..|++||.+.+ ...+...|+||+|++++++++|..|+..... .......... .......
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL-PTPSLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhc-CCccccc
Confidence 244567899999999987 5788899999999999999999988654431 1111111111 1000000
Q ss_pred CCC----hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 276 QFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 276 ~~~----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
... ......+.+++..|+..+|..|.+..+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111 1123578999999999999999998887765
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=185.27 Aligned_cols=140 Identities=16% Similarity=0.158 Sum_probs=109.5
Q ss_pred cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--c-------HHH-----------------HHHHHHHHhccCCCCc
Q 011353 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--D-------ARQ-----------------FLEEARAVGQLRNRRL 115 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~e~~~l~~l~h~ni 115 (488)
.+.||+|+||.||+|...+|+.||||+++..... . ..+ ..+|+..+..+.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4678999999999999778999999999754211 1 111 2349999999988876
Q ss_pred ccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCcccccccCcceeeCCCCC
Q 011353 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAYRIVFDDDVN 194 (488)
Q Consensus 116 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~iiH~Dlkp~Nill~~~~~ 194 (488)
.....+.. ...+|||||++|+++...+.. ..++++..+..++.|++.+|.++ |+. |++||||||+|||++ ++.
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~-giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDC-RLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEE-CCc
Confidence 44333322 223899999998877655322 35689999999999999999999 687 999999999999998 478
Q ss_pred eeeecCCCccccC
Q 011353 195 PRLSCFGLMKNSR 207 (488)
Q Consensus 195 ~kl~DfGla~~~~ 207 (488)
++|+|||++....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=186.95 Aligned_cols=169 Identities=11% Similarity=0.033 Sum_probs=131.8
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHH---------HHHHHHHHhccCCCCcccEEEEEeeC--
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQ---------FLEEARAVGQLRNRRLANLLGCCCEG-- 125 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l~h~niv~l~~~~~~~-- 125 (488)
.+|++++.+|.|+||.||+... ++..+|||.++......... +.+|+..+.++.|++|+.+..++...
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred CceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 3678888899999999999766 56689999997654333222 57899999999999999999886643
Q ss_pred ------CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeec
Q 011353 126 ------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 199 (488)
Q Consensus 126 ------~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~D 199 (488)
+..+|||||++|.+|.++.. ++. ....+++.+|..+|+. |++|||+||+||+++.+| ++|+|
T Consensus 110 ~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~-gi~H~Dikp~Nili~~~g-i~liD 177 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH-GMVSGDPHKGNFIVSKNG-LRIID 177 (232)
T ss_pred ccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc-CCccCCCChHHEEEeCCC-EEEEE
Confidence 34789999999999988741 333 2456999999999999 999999999999999888 99999
Q ss_pred CCCccccCCCCccccCCCCCCccccccCCCCCCccchhhHHHHHHHH
Q 011353 200 FGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246 (488)
Q Consensus 200 fGla~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 246 (488)
||........... ..++....+..++|+||||+++..+.
T Consensus 178 fg~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 178 LSGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 9987655322111 11333445677999999999987654
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-24 Score=207.77 Aligned_cols=224 Identities=16% Similarity=0.166 Sum_probs=186.8
Q ss_pred CCCCCCCeEEEEEe----CCCCEEEEEEcCCCCCcc--HHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 65 HGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 65 lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
+|.|+||.|+++.. +.|..+|+|++++..... ......|..++..++ ||.+|++.-.+..+...++++++..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 69999999998763 347789999987643221 224556788888886 99999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCccccCCC
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 217 (488)
|.|...+.. ...+++.....+...++-+++++|+. +++|||+|++||+++.+|++++.|||+.+..-.....+||..
T Consensus 82 g~lft~l~~--~~~f~~~~~~~~~aelaLald~lh~l-~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 82 GDLFTRLSK--EVMFDELDVAFYLAELALALDHLHKL-GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred chhhhcccc--CCchHHHHHHHHHHHHHHHHhhcchh-HHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 999888854 44578888888999999999999998 999999999999999999999999999998777766699999
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCC
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 297 (488)
|||||++. .....+|.||||++++||+||-.||..+....+... ....|...+..+.+++..++..+|
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~----------~~~~p~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKA----------ELEMPRELSAEARSLFRQLFKRNP 226 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhh----------ccCCchhhhHHHHHHHHHHHhhCH
Confidence 99999998 567789999999999999999999887333222111 123566778899999999999999
Q ss_pred CCCCCh
Q 011353 298 RERPNP 303 (488)
Q Consensus 298 ~~Rps~ 303 (488)
..|--.
T Consensus 227 ~nrLg~ 232 (612)
T KOG0603|consen 227 ENRLGA 232 (612)
T ss_pred HHHhcc
Confidence 999643
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.8e-24 Score=216.62 Aligned_cols=244 Identities=15% Similarity=0.078 Sum_probs=179.6
Q ss_pred cccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC--CCccH----HHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 62 VSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~----~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
...+|.|++|.|+... ......++.|..... ..... ..+..|+.+-..+.|+|++..+..+.+.....-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 3456999999888877 334444555544311 11111 1255677788889999998877777666665666999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----- 209 (488)
|++ +|..++.. ...++...+-.++.|++.|+.|+|+. |+.|||+|++|++++.+|.+||+|||.+......
T Consensus 403 ~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~-GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 403 CPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSM-GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred ccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhc-CceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 999 99999964 23588889999999999999999999 9999999999999999999999999998765432
Q ss_pred ---CccccCCCCCCccccccCCCCC-CccchhhHHHHHHHHhCCCCCCchhhHHH---hhccccccccccccCCCChHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTP-ESVMYSFGTLLLDLLSGKHIPPSHALDLI---RDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~-~~Dv~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
....|+-+|+|||++.+..|++ ..||||.|+++..|++|+.||.......- ........-...-...+....+
T Consensus 479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 558 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLP 558 (601)
T ss_pred hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhch
Confidence 2346788999999999999987 57999999999999999977643211100 0000000000000111223456
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..-+.+|.++|+.+|.+|.|+.+|++.
T Consensus 559 ~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 559 RETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred hhHHHHHHHHccCChhheecHHHHhhC
Confidence 788999999999999999999999976
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-22 Score=177.36 Aligned_cols=141 Identities=15% Similarity=0.142 Sum_probs=112.2
Q ss_pred cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc---------------------c-----HHHHHHHHHHHhccCCCCc
Q 011353 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP---------------------D-----ARQFLEEARAVGQLRNRRL 115 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~e~~~l~~l~h~ni 115 (488)
.+.||+|+||.||+|...+|+.||||+++..... . ...+.+|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999768999999998764211 0 1124578999999999987
Q ss_pred ccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccCcceeeCCCCC
Q 011353 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVN 194 (488)
Q Consensus 116 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~ 194 (488)
.....+.... .+|||||++|+++...... ...++......++.|++.+|.++|+ . |++||||||+|||++ ++.
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~-givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEA-GLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhC-CEecCCCChhhEEEE-CCC
Confidence 6554444332 4899999998865443222 3457888999999999999999999 7 999999999999999 889
Q ss_pred eeeecCCCccccCC
Q 011353 195 PRLSCFGLMKNSRD 208 (488)
Q Consensus 195 ~kl~DfGla~~~~~ 208 (488)
++|+|||++.....
T Consensus 156 ~~liDFG~a~~~~~ 169 (190)
T cd05145 156 PYIIDVSQAVELDH 169 (190)
T ss_pred EEEEEcccceecCC
Confidence 99999999876654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-21 Score=168.34 Aligned_cols=179 Identities=15% Similarity=0.100 Sum_probs=137.5
Q ss_pred ccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCcc----HHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEecC
Q 011353 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD----ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
+...|++|+||+||.+.. .+.+++.+.+.....-. ...+.+|+++|++|. |++|++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 345679999999997766 66788888887554311 225889999999995 5889999886 3469999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccc-cCcceeeCCCCCeeeecCCCccccCCCCcc--
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL-NAYRIVFDDDVNPRLSCFGLMKNSRDGRSY-- 212 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dl-kp~Nill~~~~~~kl~DfGla~~~~~~~~~-- 212 (488)
.|.+|...+.. . ...++.|++.+|.++|+. ||+|||| ||+|||++.++.++|+|||++.........
T Consensus 81 ~G~~L~~~~~~---~------~~~~~~qi~~~L~~lH~~-GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 81 AGAAMYQRPPR---G------DLAYFRAARRLLQQLHRC-GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred cCccHHhhhhh---h------hHHHHHHHHHHHHHHHHC-cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 99998765411 1 135778999999999999 9999999 799999999999999999999865443310
Q ss_pred ---------------ccCCCCCCccccccC-CCC-CCccchhhHHHHHHHHhCCCCCCc
Q 011353 213 ---------------STNLAFTPPEYLRTG-RVT-PESVMYSFGTLLLDLLSGKHIPPS 254 (488)
Q Consensus 213 ---------------~~~~~y~aPE~~~~~-~~~-~~~Dv~slG~~l~el~tg~~p~~~ 254 (488)
..++.|++|+..... ..+ ...+.++-|..+|.++|++.+..+
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 125678888765432 233 467889999999999999976544
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.5e-21 Score=172.33 Aligned_cols=108 Identities=23% Similarity=0.330 Sum_probs=104.2
Q ss_pred hhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHH
Q 011353 377 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 456 (488)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (488)
.....+++++..|+.+++.++|++|+..|++||+++|+ ++.+|.|||.+|.++|+|+.|+++|+.||++||.+.++|.+
T Consensus 76 e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~R 154 (304)
T KOG0553|consen 76 EDKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGR 154 (304)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHH
Confidence 45677899999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 457 QAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+|.+|+.+|++++|++.|++||++||++.
T Consensus 155 LG~A~~~~gk~~~A~~aykKaLeldP~Ne 183 (304)
T KOG0553|consen 155 LGLAYLALGKYEEAIEAYKKALELDPDNE 183 (304)
T ss_pred HHHHHHccCcHHHHHHHHHhhhccCCCcH
Confidence 99999999999999999999999999763
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-21 Score=190.50 Aligned_cols=209 Identities=22% Similarity=0.333 Sum_probs=161.5
Q ss_pred HhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcc
Q 011353 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186 (488)
Q Consensus 107 l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~N 186 (488)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.-...++++|+.||.|||......|+.+++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 4578999999999999999999999999999999999976 445689999999999999999999987333899999999
Q ss_pred eeeCCCCCeeeecCCCccccCC------CCccccCCCCCCccccccCC-------CCCCccchhhHHHHHHHHhCCCCCC
Q 011353 187 IVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAFTPPEYLRTGR-------VTPESVMYSFGTLLLDLLSGKHIPP 253 (488)
Q Consensus 187 ill~~~~~~kl~DfGla~~~~~------~~~~~~~~~y~aPE~~~~~~-------~~~~~Dv~slG~~l~el~tg~~p~~ 253 (488)
.++|..+.+||+|||+...... ........-|.|||.+.+.. .+.+.||||||++++|+++.+.||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 9999999999999999776642 11122346799999998631 4667999999999999999999887
Q ss_pred chhhHHHhhccccccc---cccccCCCC-h-HHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 254 SHALDLIRDRNIQTLT---DSCLEGQFS-S-DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 254 ~~~~~~~~~~~~~~~~---~~~~~~~~~-~-~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
..............+. ....++... . ...+++..++..||..+|..||++..+-..++.+.+.
T Consensus 160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 5321111000101100 011111111 1 3445799999999999999999999999998877664
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.9e-21 Score=169.66 Aligned_cols=133 Identities=15% Similarity=0.131 Sum_probs=105.4
Q ss_pred ccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-----CCCCcccEEEEEeeCC---eeE-EEEe
Q 011353 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-----RNRRLANLLGCCCEGD---ERL-LVAE 133 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~~~-lv~E 133 (488)
..||+|+||.||. ...++.. +||++........+.+.+|+.+++.+ +||||++++|++.++. .++ +|+|
T Consensus 8 ~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 8 SPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred ceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 4569999999996 3334444 69998765444567799999999999 5799999999998873 434 7899
Q ss_pred c--CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHH-HHhhcCCCcccccccCcceeeCC----CCCeeeecCCCc
Q 011353 134 Y--MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEAL-EYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGLM 203 (488)
Q Consensus 134 ~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L-~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~DfGla 203 (488)
| +++|||.+++.+ ..+++. ..++.|++.++ +|||+. +|+||||||+|||++. ++.++|+||+.+
T Consensus 86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~-~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDN-RIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 9 667999999954 236655 36688888888 999998 9999999999999963 347999995443
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-21 Score=201.40 Aligned_cols=244 Identities=18% Similarity=0.209 Sum_probs=174.9
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCC-CccHHHHHH---HHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA-WPDARQFLE---EARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~---e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
++...+.||.+.|=.|.+|+.+.|. |+||++-+.. .-..+.|.+ |++ ...++|||++.+.-+......-|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4556678899999999999988885 9999975433 223444444 444 455589999998888777777899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC---C-C
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR---D-G 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~---~-~ 209 (488)
|+.+ +|.|.|.. +.-+.......|+.|++.||.-+|.. ||+|||||.+||||+.-.-+.|+||..-+... + .
T Consensus 102 yvkh-nLyDRlST--RPFL~~iEKkWiaFQLL~al~qcH~~-gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 102 YVKH-NLYDRLST--RPFLVLIEKKWIAFQLLKALSQCHKL-GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHhh-hhhhhhcc--chHHHHHHHHHHHHHHHHHHHHHHHc-CccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 9966 89999942 22356677888999999999999999 99999999999999999999999997644221 1 1
Q ss_pred Cc-------cccCCCCCCcccccc----------CC-CCCCccchhhHHHHHHHHhC-CCCCCchhhHHHhhcccccccc
Q 011353 210 RS-------YSTNLAFTPPEYLRT----------GR-VTPESVMYSFGTLLLDLLSG-KHIPPSHALDLIRDRNIQTLTD 270 (488)
Q Consensus 210 ~~-------~~~~~~y~aPE~~~~----------~~-~~~~~Dv~slG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~ 270 (488)
.. ......|+|||-+.. .. .+++-||||+||++.||++- ++||.-...-.++.+. .....
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e 256 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPE 256 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHH
Confidence 11 111246999997753 12 67889999999999999985 5444322211122221 11111
Q ss_pred ccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHh
Q 011353 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 271 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 312 (488)
..+. .+ ....+++++..|++.||++|.|+.+.|+.-.+
T Consensus 257 ~~Le-~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 257 QLLE-KI---EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred HHHH-hC---cCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 1111 11 12368999999999999999999999988433
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-21 Score=178.60 Aligned_cols=226 Identities=20% Similarity=0.186 Sum_probs=145.8
Q ss_pred ccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCC----------CCcccEEEEEe-----
Q 011353 63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRN----------RRLANLLGCCC----- 123 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~----- 123 (488)
+.||.|+++.||.++. .+++.+|||++.... ....+++.+|.-....+.+ -.++.-++...
T Consensus 18 ~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~ 97 (288)
T PF14531_consen 18 RIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKP 97 (288)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-
T ss_pred cccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCC
Confidence 4569999999999995 568999999985433 2235667777665555432 12222222221
Q ss_pred ----eCC--------eeEEEEecCCCCCHHhhhc---cCCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcc
Q 011353 124 ----EGD--------ERLLVAEYMPNDTLAKHLF---HWET--QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186 (488)
Q Consensus 124 ----~~~--------~~~lv~E~~~~gsL~~~l~---~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~N 186 (488)
... +.+++|+-+. ++|.+++. .... ..+....+..+..|+++.+++||+. |++|+||+|+|
T Consensus 98 ~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-GlVHgdi~~~n 175 (288)
T PF14531_consen 98 PFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-GLVHGDIKPEN 175 (288)
T ss_dssp SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGG
T ss_pred cceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc-ceEecccceee
Confidence 111 2367888874 48888764 1111 1233455677789999999999999 99999999999
Q ss_pred eeeCCCCCeeeecCCCccccCCCCc-cccCCCCCCcccccc--------CCCCCCccchhhHHHHHHHHhCCCCCCchhh
Q 011353 187 IVFDDDVNPRLSCFGLMKNSRDGRS-YSTNLAFTPPEYLRT--------GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL 257 (488)
Q Consensus 187 ill~~~~~~kl~DfGla~~~~~~~~-~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 257 (488)
++++.+|.+.|+||+.....+.... ...+..|.+||.... ..++.+.|.|++|+++|.|++|..||.....
T Consensus 176 fll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~ 255 (288)
T PF14531_consen 176 FLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSP 255 (288)
T ss_dssp EEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGG
T ss_pred EEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCc
Confidence 9999999999999998776655433 344678999997753 2478899999999999999999988864322
Q ss_pred HHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCC
Q 011353 258 DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 300 (488)
...... ...... +.++.+..||..+|+.+|.+|
T Consensus 256 ~~~~~~---------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 256 EADPEW---------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GSTSGG---------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cccccc---------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 111111 111223 578899999999999999987
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-19 Score=167.23 Aligned_cols=192 Identities=16% Similarity=0.174 Sum_probs=142.8
Q ss_pred CCCCcccEEEEEee---------------------------CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHH
Q 011353 111 RNRRLANLLGCCCE---------------------------GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALH 163 (488)
Q Consensus 111 ~h~niv~l~~~~~~---------------------------~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~q 163 (488)
+|||||++.++|.+ +..+|+||.-.+. ||.+++.. +..+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~---~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT---RHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc---CCCchHHHHHHHHH
Confidence 59999999998854 2346899998866 89999953 34666777889999
Q ss_pred HHHHHHHhhcCCCcccccccCcceee--CCCCC--eeeecCCCccccCC----------CCccccCCCCCCccccccCC-
Q 011353 164 IAEALEYCTSKERALYHDLNAYRIVF--DDDVN--PRLSCFGLMKNSRD----------GRSYSTNLAFTPPEYLRTGR- 228 (488)
Q Consensus 164 i~~~L~~LH~~~~iiH~Dlkp~Nill--~~~~~--~kl~DfGla~~~~~----------~~~~~~~~~y~aPE~~~~~~- 228 (488)
+++|+.|||.. ||.|||+|.+|||+ |+++. +.|+|||.+--... .....|.-.-||||+...-+
T Consensus 350 lLEav~hL~~h-gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKH-GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHc-cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 99999999998 99999999999999 45544 68999997542221 11223566789999986422
Q ss_pred ----CC-CCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCCh
Q 011353 229 ----VT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303 (488)
Q Consensus 229 ----~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 303 (488)
.+ .++|.|+.|.+.||+++...||+............++- .....+..+++.+.+++...|+.||++|+|.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~----qLPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES----QLPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh----hCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 22 38999999999999999999998743222222221111 1123445577889999999999999999998
Q ss_pred HHHHHHHH
Q 011353 304 RSLVTALV 311 (488)
Q Consensus 304 ~~il~~L~ 311 (488)
.-..+.|+
T Consensus 505 ~iAANvl~ 512 (598)
T KOG4158|consen 505 NIAANVLN 512 (598)
T ss_pred cHHHhHHH
Confidence 77776655
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-19 Score=165.27 Aligned_cols=143 Identities=15% Similarity=0.102 Sum_probs=111.8
Q ss_pred cccccccCCCCCCCeEEEEE--eCCCCEEEEEEcCCCCCc-------------------c-----HHHHHHHHHHHhccC
Q 011353 58 MENIVSEHGEKAPNVVYKGK--LENQFRIAVKRFNRSAWP-------------------D-----ARQFLEEARAVGQLR 111 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~-------------------~-----~~~~~~e~~~l~~l~ 111 (488)
.|.+.+.||.|+||.||+|. ..+|+.||||+++..... . ...+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46677889999999999998 568999999998754211 0 123568999999997
Q ss_pred CC--CcccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-cccccccCccee
Q 011353 112 NR--RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-ALYHDLNAYRIV 188 (488)
Q Consensus 112 h~--niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-iiH~Dlkp~Nil 188 (488)
+. .+++++++ ...++||||++|++|...... ...+.......++.||+.+|.+||+. | ++|+||||+||+
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-g~iiH~Dikp~NIl 181 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLYKE-GELVHGDLSEYNIL 181 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHHhc-CCEEeCCCChhhEE
Confidence 53 34455543 234899999999888765532 23456667789999999999999998 8 999999999999
Q ss_pred eCCCCCeeeecCCCccccCC
Q 011353 189 FDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 189 l~~~~~~kl~DfGla~~~~~ 208 (488)
++ ++.++|+|||.+.....
T Consensus 182 i~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 182 VH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred EE-CCCEEEEEChhhhccCC
Confidence 99 88999999999875443
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.1e-19 Score=160.67 Aligned_cols=134 Identities=16% Similarity=0.164 Sum_probs=113.1
Q ss_pred ccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCcc--------HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+.||+|++|.||+|.. ++..|+||+........ ...+.+|+.++..+.|++|+....++.+....++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4679999999999987 66689999865433211 23578899999999999988877777777888999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
++|++|.+++... .+ .+..++.+++.+|.++|+. +++|+|++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~-~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSA-GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhC-CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999998531 22 7889999999999999998 999999999999999 78999999998754
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-19 Score=188.32 Aligned_cols=240 Identities=16% Similarity=0.130 Sum_probs=170.4
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC---CCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.+.|-+++|.|+||.||+|...+|+.||||+-+..+.- +|.--.+++.+|+ -+-|..+.....-.+..++|+||
T Consensus 699 ~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey 775 (974)
T KOG1166|consen 699 KFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEY 775 (974)
T ss_pred eEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeec
Confidence 45566788999999999999778999999998765421 1222334455555 22344444444445667999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC-------CCCCeeeecCCCcccc-
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-------DDVNPRLSCFGLMKNS- 206 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-------~~~~~kl~DfGla~~~- 206 (488)
.+.|||.+++. ..+.++|..+..++.|+++.++.||.. +|||+||||+|+||. +.-.++|+|||.+-.+
T Consensus 776 ~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~-~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 776 SPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAM-GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred cccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhc-ceecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 99999999996 456799999999999999999999998 999999999999993 3345899999987643
Q ss_pred --CCCC---ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 207 --RDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 207 --~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
.++. ...+|-.+-.+|...|..++...|.|.|.-+++-|+.|+..- ..++....+... ....+..
T Consensus 853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------~~~g~~~~~~~~-~~Ry~~~-- 922 (974)
T KOG1166|consen 853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------VKNGSSWMVKTN-FPRYWKR-- 922 (974)
T ss_pred EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------hcCCcceecccc-chhhhhH--
Confidence 3332 234678899999999999999999999999999999998421 111111111111 1111112
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
...-+|...+|..|-..=|...++...++...
T Consensus 923 -~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 923 -DMWNKFFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred -HHHHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 23445556666633333377777777776654
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-20 Score=176.46 Aligned_cols=165 Identities=24% Similarity=0.329 Sum_probs=126.5
Q ss_pred CeeEEEEecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 126 DERLLVAEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 126 ~~~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
..++|.|++|...+|.++|.++. ....++.....++.|++.|++| + +.+|+|+||.||.+..+..+||+|||+..
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhccccccccccchhhhhhhhhhee
Confidence 35789999999999999997432 3346788899999999999999 6 89999999999999999999999999976
Q ss_pred ccCCC----------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCch-----hhHHHhhccccccc
Q 011353 205 NSRDG----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-----ALDLIRDRNIQTLT 269 (488)
Q Consensus 205 ~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~-----~~~~~~~~~~~~~~ 269 (488)
..... +...||..||+||.+.+..|+.++||||||++|+|+++- |... ....+..+.+.
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~---f~T~~er~~t~~d~r~g~ip--- 478 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ---FSTQFERIATLTDIRDGIIP--- 478 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH---hccHHHHHHhhhhhhcCCCC---
Confidence 54432 345689999999999999999999999999999999982 2211 11112222211
Q ss_pred cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHH
Q 011353 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306 (488)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~i 306 (488)
+..... .+.-..|+.+++...|.+||++.+.
T Consensus 479 -~~~~~d-----~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 479 -PEFLQD-----YPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred -hHHhhc-----CcHHHHHHHHhcCCCcccCchHHHH
Confidence 111111 1345689999999999999954443
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-18 Score=155.77 Aligned_cols=129 Identities=18% Similarity=0.212 Sum_probs=105.9
Q ss_pred CCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 65 HGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 65 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
||+|+||.||+|.+ ++..|++|........ ...++.+|+.++..++|+++.....++......++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 69999999999996 5678999986543211 12457789999999998876665555666677899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
|++|.+++... . . .++.+++.+|.+||+. |++|+|++|.||+++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~~--~-~------~~~~~i~~~l~~lH~~-gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEEG--N-D------ELLREIGRLVGKLHKA-GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhhc--H-H------HHHHHHHHHHHHHHHC-CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999987431 1 1 7899999999999998 999999999999999 88999999998765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.4e-19 Score=183.02 Aligned_cols=201 Identities=18% Similarity=0.162 Sum_probs=143.4
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
+++.|+.+-.|++|.||.+.+ .+.+.+|+ ++++... +.+. ++.....|.+|
T Consensus 84 df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l-----ilRn--ilt~a~npfvv-------------------- 135 (1205)
T KOG0606|consen 84 DFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL-----ILRN--ILTFAGNPFVV-------------------- 135 (1205)
T ss_pred ccceeEeeccCCCCceeeeeccccccchhh-cccccch-----hhhc--cccccCCccee--------------------
Confidence 455677779999999999984 45778999 4443321 1111 23333344433
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--------
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-------- 208 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~-------- 208 (488)
|+-...++. .++++.. ++.+++|||+. ||+|||+||+|.+|+.-|++|++|||+.+....
T Consensus 136 -gDc~tllk~--~g~lPvd--------mvla~Eylh~y-givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~e 203 (1205)
T KOG0606|consen 136 -GDCATLLKN--IGPLPVD--------MVLAVEYLHSY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKE 203 (1205)
T ss_pred -chhhhhccc--CCCCcch--------hhHHhHhhccC-CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhh
Confidence 333444432 2234432 27889999998 999999999999999999999999999764211
Q ss_pred -----------CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCC
Q 011353 209 -----------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (488)
Q Consensus 209 -----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
.+...+|+.|+|||++....|...+|+|++|+|+||.+-|..||+++..+.+....+...+.. .+-
T Consensus 204 g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w---pE~ 280 (1205)
T KOG0606|consen 204 GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW---PEE 280 (1205)
T ss_pred cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc---ccc
Confidence 122368999999999999999999999999999999999999999885544433333222211 111
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCC
Q 011353 278 SSDEGTELVRLASRCLQYEPRERP 301 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rp 301 (488)
....++++++++..+|+.+|..|-
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhc
Confidence 233567899999999999999994
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-18 Score=154.28 Aligned_cols=137 Identities=17% Similarity=0.132 Sum_probs=108.1
Q ss_pred ccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc----------------------cHHHHHHHHHHHhccCCC--C
Q 011353 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----------------------DARQFLEEARAVGQLRNR--R 114 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~--n 114 (488)
+.+.+.||.|+||.||++...+|+.||||+++..... ....+.+|+.++..+.|+ .
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 5566778999999999999878999999987643210 011356788999999777 4
Q ss_pred cccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC
Q 011353 115 LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (488)
Q Consensus 115 iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (488)
++..++. ...++||||++|++|...... .....++.+++.++.++|+. |++|+||||+||+++.++.
T Consensus 97 v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~-gi~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 97 VPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH-GIIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC-CCCcCCCCcccEEEcCCCc
Confidence 5555542 345899999999998775421 23567889999999999998 9999999999999999999
Q ss_pred eeeecCCCccccCC
Q 011353 195 PRLSCFGLMKNSRD 208 (488)
Q Consensus 195 ~kl~DfGla~~~~~ 208 (488)
++|+|||++.....
T Consensus 164 ~~liDfg~~~~~~~ 177 (198)
T cd05144 164 IYIIDWPQMVSTDH 177 (198)
T ss_pred EEEEECCccccCCC
Confidence 99999999865543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.1e-18 Score=175.03 Aligned_cols=133 Identities=20% Similarity=0.191 Sum_probs=108.0
Q ss_pred ccccCCCCCCCeEEEEEeCCCCEEEEEE-cCCC-CCc------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 61 IVSEHGEKAPNVVYKGKLENQFRIAVKR-FNRS-AWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~-~~~~-~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..+.||+|+||+||++.+.+.. +++|+ +... ... ....+.+|+.++..++|++++....++.+....++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 3456799999999999875543 44443 2211 111 1245889999999999999998888887777889999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
||++|++|.+++. ....++.+++.+|.+||+. +++||||||+|||+ +++.++|+|||+++..
T Consensus 416 E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~-giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 416 EYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA-GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC-CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999999883 3567899999999999998 99999999999999 6789999999998654
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-17 Score=140.41 Aligned_cols=135 Identities=15% Similarity=0.037 Sum_probs=113.5
Q ss_pred ccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCC--CCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
+++.+|.|.++.||++...+ ..++||....... ...+.+|+.++..++| .++++++++....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 34677999999999999755 6899999875442 4578899999999976 58999999988888899999999887
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC--CCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
++..+ +......++.+++.+|.+||.. .+++|+|++|.||+++..+.++++|||.+....
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP 140 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence 66543 5566778899999999999985 269999999999999998999999999886543
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.9e-17 Score=142.99 Aligned_cols=137 Identities=16% Similarity=0.146 Sum_probs=98.9
Q ss_pred cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--cHHHH----------------------HHHHHHHhccCCC--Cc
Q 011353 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQF----------------------LEEARAVGQLRNR--RL 115 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~e~~~l~~l~h~--ni 115 (488)
.+.||+|+||.||+|...+++.||||+++..... ....+ ..|...+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4567999999999999778999999998754221 11111 3456666666433 34
Q ss_pred ccEEEEEeeCCeeEEEEecCCCCCHHhh-hccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccCcceeeCCCC
Q 011353 116 ANLLGCCCEGDERLLVAEYMPNDTLAKH-LFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDV 193 (488)
Q Consensus 116 v~l~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~ 193 (488)
++.++. ...++||||++++++... +.. .... .....++.+++.++.++|. . +++|+||||+||+++ ++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~-~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREA-GLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhcc-CcCcCCCChhhEEEE-CC
Confidence 455543 245899999999544321 211 0011 5678899999999999999 7 999999999999999 89
Q ss_pred CeeeecCCCccccCC
Q 011353 194 NPRLSCFGLMKNSRD 208 (488)
Q Consensus 194 ~~kl~DfGla~~~~~ 208 (488)
.++|+|||.+.....
T Consensus 152 ~~~liDfg~a~~~~~ 166 (187)
T cd05119 152 KVYIIDVPQAVEIDH 166 (187)
T ss_pred cEEEEECcccccccC
Confidence 999999999865543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-16 Score=145.56 Aligned_cols=133 Identities=17% Similarity=0.145 Sum_probs=102.9
Q ss_pred CC-CCCCCeEEEEEeCCCCEEEEEEcCCCCC-------------ccHHHHHHHHHHHhccCCCCc--ccEEEEEeeCCe-
Q 011353 65 HG-EKAPNVVYKGKLENQFRIAVKRFNRSAW-------------PDARQFLEEARAVGQLRNRRL--ANLLGCCCEGDE- 127 (488)
Q Consensus 65 lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~~~- 127 (488)
+| .|+.|+||.+... +..++||.+..... .....+.+|+.++..|.|++| +..+++......
T Consensus 39 lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~ 117 (239)
T PRK01723 39 VGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL 117 (239)
T ss_pred eecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc
Confidence 46 7778899999874 56899998753210 123468889999999998875 677776543322
Q ss_pred ---eEEEEecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 128 ---RLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 128 ---~~lv~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
.++|||+++| .+|.+++.. .+++.. .+.+|+.+|.+||+. ||+|+||||.|||++.++.++|+|||.+
T Consensus 118 ~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~-GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 118 FYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDA-GVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred ceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHC-CCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 3599999997 699998853 345554 357899999999999 9999999999999998899999999987
Q ss_pred ccc
Q 011353 204 KNS 206 (488)
Q Consensus 204 ~~~ 206 (488)
...
T Consensus 190 ~~~ 192 (239)
T PRK01723 190 ELR 192 (239)
T ss_pred ccC
Confidence 653
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.3e-18 Score=174.18 Aligned_cols=250 Identities=13% Similarity=0.118 Sum_probs=190.0
Q ss_pred CCcccccccCCCCCCCeEEEEEe--CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 130 (488)
...|++++.+|+|+|+.|-.... .....+|+|.+.... .........|..+-..+. |+|++++++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 34667777889999999988874 335677888776543 122334555777878886 9999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh-cCCCcccccccCcceeeCCCC-CeeeecCCCccccCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT-SKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~iiH~Dlkp~Nill~~~~-~~kl~DfGla~~~~~ 208 (488)
+++|..|+++.+-+.......++....-.+..|+..++.|+| .. ++.|+|+||+|.+++..+ ..+++|||+|.....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~-~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN-GVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc-ccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999883222224666777889999999999999 76 999999999999999999 999999999987655
Q ss_pred -C------Ccccc-CCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccccccccc--CCC
Q 011353 209 -G------RSYST-NLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--GQF 277 (488)
Q Consensus 209 -~------~~~~~-~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 277 (488)
. ....| ++.|+|||...+. ......|+||.|+++.-+++|..|+....... .....+...... ...
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~ 254 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNKGRFTQLP 254 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccccccccCc
Confidence 2 12456 8999999999984 45778999999999999999998765332111 111111111111 112
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....+....+++.+++..+|..|.+.+++...
T Consensus 255 ~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 255 WNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cccCChhhhhcccccccCCchhcccccccccc
Confidence 23345678899999999999999998887765
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.2e-16 Score=147.90 Aligned_cols=103 Identities=26% Similarity=0.363 Sum_probs=99.5
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
+...+.+|+.+|+.|||..|+..|++||+.+|+ ++.+|.|||.||.++|.+..|+.|++++++++|++.++|++.|.++
T Consensus 358 A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al 436 (539)
T KOG0548|consen 358 AEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAAL 436 (539)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 556668899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHccccccc
Q 011353 462 FALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
..+.+|++|++.|++|+++||++.
T Consensus 437 ~~mk~ydkAleay~eale~dp~~~ 460 (539)
T KOG0548|consen 437 RAMKEYDKALEAYQEALELDPSNA 460 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhH
Confidence 999999999999999999999765
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.3e-15 Score=125.31 Aligned_cols=99 Identities=14% Similarity=0.157 Sum_probs=95.8
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 464 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 464 (488)
...+|..+++.|+|++|+..|++++.++|. +..+|.++|.++..+|++++|+..|++|++++|+++.+++++|.++..+
T Consensus 27 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~~ 105 (144)
T PRK15359 27 VYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMM 105 (144)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 446799999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHcccccc
Q 011353 465 GKENEAQAALREASILENKK 484 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld~~~ 484 (488)
|++++|++.|++|++++|++
T Consensus 106 g~~~eAi~~~~~Al~~~p~~ 125 (144)
T PRK15359 106 GEPGLAREAFQTAIKMSYAD 125 (144)
T ss_pred CCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999875
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.2e-15 Score=144.61 Aligned_cols=103 Identities=28% Similarity=0.422 Sum_probs=99.5
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
+...+.+|+.++..|||+.|+..|+.||.++|. |+..|.|++.+|..+|+|++|+++..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 346779999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHccccccc
Q 011353 462 FALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
..+|+|++|+..|.++|+.||.+.
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~ 104 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNK 104 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchH
Confidence 999999999999999999999765
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.5e-15 Score=123.46 Aligned_cols=111 Identities=16% Similarity=0.221 Sum_probs=102.9
Q ss_pred hhhhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC----CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc
Q 011353 375 WTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV----SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW 450 (488)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~ 450 (488)
..+++..+..++..|+.+|+.|+|++|...|+.||++-|.- ...+|.|+|.|+.+++.++.||.+|.+||+|+|.+
T Consensus 88 k~k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty 167 (271)
T KOG4234|consen 88 KDKAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTY 167 (271)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchh
Confidence 44557778889999999999999999999999999999872 34689999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 451 HMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 451 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
-+|+.++|.+|.++.+|++|+++|++.+++||...
T Consensus 168 ~kAl~RRAeayek~ek~eealeDyKki~E~dPs~~ 202 (271)
T KOG4234|consen 168 EKALERRAEAYEKMEKYEEALEDYKKILESDPSRR 202 (271)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchH
Confidence 99999999999999999999999999999999764
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.7e-15 Score=135.13 Aligned_cols=106 Identities=24% Similarity=0.354 Sum_probs=101.3
Q ss_pred hHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHH
Q 011353 379 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 458 (488)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (488)
+....+++.+|+.||++|.|++|+.+|.++|.++|. |+..|.|||.+|++++.|..|..||+.|+.+|-.+.+||.++|
T Consensus 94 L~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~ 172 (536)
T KOG4648|consen 94 LKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRM 172 (536)
T ss_pred HHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHH
Confidence 444556889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 459 AALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.+...+|..+||.++++.+|+|+|+.+
T Consensus 173 ~AR~~Lg~~~EAKkD~E~vL~LEP~~~ 199 (536)
T KOG4648|consen 173 QARESLGNNMEAKKDCETVLALEPKNI 199 (536)
T ss_pred HHHHHHhhHHHHHHhHHHHHhhCcccH
Confidence 999999999999999999999999865
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-14 Score=139.30 Aligned_cols=102 Identities=26% Similarity=0.314 Sum_probs=98.0
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
..+..+|..++..|+|++|++.|++||+++|+ +..+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHccccccc
Q 011353 463 ALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.+|+|++|+.+|++|++++|.+.
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~ 104 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDS 104 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999998754
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.3e-15 Score=145.95 Aligned_cols=241 Identities=20% Similarity=0.227 Sum_probs=181.8
Q ss_pred cccccCCC--CCCCeEEEEEe---CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEE
Q 011353 60 NIVSEHGE--KAPNVVYKGKL---ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 60 ~~i~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 131 (488)
.+.+.+|. |.+|.||.+.. .++..+|+|.-+.... .....-.+|+.....+ .|+|.++.+..+...+..++-
T Consensus 117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq 196 (524)
T KOG0601|consen 117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ 196 (524)
T ss_pred ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence 35567799 99999999985 4578899998543222 2333445788888888 599999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHH----HHHHhhcCCCcccccccCcceeeCCC-CCeeeecCCCcccc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE----ALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNS 206 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~----~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~DfGla~~~ 206 (488)
+|++. .+|.++..... .-++...++.+..+... ||.++|+. +++|-|+||.||++..+ ...+++|||+...+
T Consensus 197 tE~~~-~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~-~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 197 TELCG-ESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSN-NIVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred ecccc-chhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCC-cccccccchhheecccccceeecCCcceeEEc
Confidence 99994 68888886422 23677778888888888 99999998 99999999999999988 88999999998876
Q ss_pred CCCC---------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCC
Q 011353 207 RDGR---------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (488)
Q Consensus 207 ~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
.+.. ...+...|++||.+. +.++..+|+||+|.+..+..++..++...-...+ ..+.......++
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W-----~~~r~~~ip~e~ 347 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSW-----SQLRQGYIPLEF 347 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCc-----cccccccCchhh
Confidence 5542 114567799999987 6788899999999999999999876643311111 111111112222
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....+.++...+..+++.+|-.|++.+.+.++
T Consensus 348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 22334566679999999999999998877665
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-14 Score=144.30 Aligned_cols=140 Identities=18% Similarity=0.115 Sum_probs=97.4
Q ss_pred ccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccH----------------------------------------HHHHH
Q 011353 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA----------------------------------------RQFLE 102 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~ 102 (488)
..||.|++|.||+|++.+|+.||||+.+....... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 34799999999999998999999999865421100 02444
Q ss_pred HHHHHhccC----CCCcccEEEEEe-eCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHH-HHHHhhcCCC
Q 011353 103 EARAVGQLR----NRRLANLLGCCC-EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE-ALEYCTSKER 176 (488)
Q Consensus 103 e~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~-~L~~LH~~~~ 176 (488)
|+..+.++. |.+-+.+-.++. .....+|||||++|++|.++...... ..+ ...++..++. .+..+|.. |
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~~l~ql~~~-g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARSFLNQVLRD-G 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHHHHHHHHhC-C
Confidence 555555552 222223222222 23456999999999999987643111 122 3456666665 46788988 9
Q ss_pred cccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 177 iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
++|+|+||.||+++.++.++++|||++....
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999976543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.5e-14 Score=133.99 Aligned_cols=109 Identities=20% Similarity=0.290 Sum_probs=99.7
Q ss_pred hhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC--------------CHHHHhhHHHHHHhcCChHHHHHHHHH
Q 011353 377 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--------------SPTAFARRSLSYLMSDMPQEALNDASQ 442 (488)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~ 442 (488)
..+..+...+.+|+.+|+.|+|..|...|++|+..-+.. ...+|+|+|.||+++++|.+|+..+++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 466777888899999999999999999999999664420 235799999999999999999999999
Q ss_pred hHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 443 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 443 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+|+++|++++|+|++|.+|..+|+|+.|+.+|++|++++|.++
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nk 325 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNK 325 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcH
Confidence 9999999999999999999999999999999999999999875
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.1e-14 Score=115.29 Aligned_cols=99 Identities=14% Similarity=-0.000 Sum_probs=95.0
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
...+...|..++..|++++|...|+-+..+||. ++..|+++|.|+..+|+|++||..|.+|+.++|+++.++++.|.|+
T Consensus 35 l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~c~ 113 (157)
T PRK15363 35 LNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECY 113 (157)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 345568999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHccc
Q 011353 462 FALGKENEAQAALREASILE 481 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld 481 (488)
+.+|+.+.|++.|+.|+..-
T Consensus 114 L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 114 LACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999875
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.5e-15 Score=133.46 Aligned_cols=198 Identities=19% Similarity=0.217 Sum_probs=141.1
Q ss_pred HHHhccCCCCcccEEEEEeeCC-----eeEEEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcC-CC
Q 011353 105 RAVGQLRNRRLANLLGCCCEGD-----ERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK-ER 176 (488)
Q Consensus 105 ~~l~~l~h~niv~l~~~~~~~~-----~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~ 176 (488)
..|-++.|.|||+++.|+.+.. ...+++|||..|+|.++|++. ....+......+|+-||+.||.|||+. +.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 3455667999999999987654 478999999999999999752 234577888899999999999999986 46
Q ss_pred cccccccCcceeeCCCCCeeeecCCCcccc------C--CCCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhC
Q 011353 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNS------R--DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG 248 (488)
Q Consensus 177 iiH~Dlkp~Nill~~~~~~kl~DfGla~~~------~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg 248 (488)
++|+++...-|++..+|-+|++---..... . ......+.++|.+||.-.....+..+|||+||+..++|..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 899999999999999988887532111100 0 11123346899999997777788899999999999999988
Q ss_pred CCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 249 KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 249 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
..-+................+-.. ....=..++.+|++..|..||++++++.|.
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i~~l--------en~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVIIGL--------ENGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred eeccCCCcceeehhhhhhhheeec--------cCccccCcCcccccCCCCCCcchhhhhcCc
Confidence 743222111111111111111000 011234688999999999999999999874
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.7e-14 Score=136.45 Aligned_cols=130 Identities=16% Similarity=0.156 Sum_probs=112.2
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS 430 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~ 430 (488)
+..+|....+.+..+.+..-+..+++..+.+. +.|..+-++|++++|+..|++||.++|+ .+++|.|+|..|-++
T Consensus 357 m~NLgni~~E~~~~e~A~~ly~~al~v~p~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~ 435 (966)
T KOG4626|consen 357 MNNLGNIYREQGKIEEATRLYLKALEVFPEFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEM 435 (966)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHhhChhhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHh
Confidence 33444434444445556666666665555544 8899999999999999999999999999 999999999999999
Q ss_pred CChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 431 DMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 431 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|+..+|+++|++||.++|.+++|+.++|.+|...|+..+||..|+.||+++|+..
T Consensus 436 g~v~~A~q~y~rAI~~nPt~AeAhsNLasi~kDsGni~~AI~sY~~aLklkPDfp 490 (966)
T KOG4626|consen 436 GDVSAAIQCYTRAIQINPTFAEAHSNLASIYKDSGNIPEAIQSYRTALKLKPDFP 490 (966)
T ss_pred hhHHHHHHHHHHHHhcCcHHHHHHhhHHHHhhccCCcHHHHHHHHHHHccCCCCc
Confidence 9999999999999999999999999999999999999999999999999999754
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.3e-14 Score=132.02 Aligned_cols=97 Identities=26% Similarity=0.338 Sum_probs=92.6
Q ss_pred hHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHH
Q 011353 379 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 458 (488)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (488)
...+..++++||.+|..|+|++||.+|++||++.|+ .+..|.||+.||..+|++++.++++.+||+++|++++|+++++
T Consensus 112 ~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~RRA 190 (606)
T KOG0547|consen 112 LKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLRRA 190 (606)
T ss_pred HHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 445678899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHHH
Q 011353 459 AALFALGKENEAQAALRE 476 (488)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~ 476 (488)
.++..+|++++|+.+..-
T Consensus 191 ~A~E~lg~~~eal~D~tv 208 (606)
T KOG0547|consen 191 SAHEQLGKFDEALFDVTV 208 (606)
T ss_pred HHHHhhccHHHHHHhhhH
Confidence 999999999999998754
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.7e-13 Score=127.47 Aligned_cols=101 Identities=12% Similarity=0.022 Sum_probs=97.2
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
.-+..+|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|++.|++|++++|++..+|+++|.+++
T Consensus 65 ~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~ 143 (296)
T PRK11189 65 QLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGIALY 143 (296)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34668999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHcccccc
Q 011353 463 ALGKENEAQAALREASILENKK 484 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..|++++|+++|+++++++|++
T Consensus 144 ~~g~~~eA~~~~~~al~~~P~~ 165 (296)
T PRK11189 144 YGGRYELAQDDLLAFYQDDPND 165 (296)
T ss_pred HCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999875
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.8e-13 Score=111.19 Aligned_cols=102 Identities=14% Similarity=0.128 Sum_probs=97.6
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
......|..++..|++++|++.|++++.++|. +..++.++|.++..+|++++|+..++++++++|+++..++.+|.+|.
T Consensus 18 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~ 96 (135)
T TIGR02552 18 EQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAECLL 96 (135)
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 44568899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHccccccc
Q 011353 463 ALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.+|++++|++.|+++++++|++.
T Consensus 97 ~~g~~~~A~~~~~~al~~~p~~~ 119 (135)
T TIGR02552 97 ALGEPESALKALDLAIEICGENP 119 (135)
T ss_pred HcCCHHHHHHHHHHHHHhccccc
Confidence 99999999999999999998765
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.6e-13 Score=132.40 Aligned_cols=165 Identities=15% Similarity=0.146 Sum_probs=130.9
Q ss_pred EE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCH
Q 011353 76 GK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKW 154 (488)
Q Consensus 76 ~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~ 154 (488)
|. ..++.+|.|...+...........+-++-|+.++||||++++..+...+..|||+|-+.- |..++.. +..
T Consensus 31 ~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~-----l~~ 103 (690)
T KOG1243|consen 31 GTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKE-----LGK 103 (690)
T ss_pred cceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHH-----hHH
Confidence 44 667889999998876653345577888999999999999999999999999999999853 7777754 335
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCc----cccCCCCCCccccccCCCC
Q 011353 155 AMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----YSTNLAFTPPEYLRTGRVT 230 (488)
Q Consensus 155 ~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~----~~~~~~y~aPE~~~~~~~~ 230 (488)
..+...+.||+.||.|||+.++++|++|.-.-|+++..|+.||++|-++........ ...-..|..|+.+....
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--
Confidence 667778899999999999777999999999999999999999999988765443321 11223467776654322
Q ss_pred CCccchhhHHHHHHHHhCC
Q 011353 231 PESVMYSFGTLLLDLLSGK 249 (488)
Q Consensus 231 ~~~Dv~slG~~l~el~tg~ 249 (488)
-..|.|.|||+++|++.|.
T Consensus 182 ~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cchhhhhHHHHHHHHhCcc
Confidence 3569999999999999993
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.4e-14 Score=141.87 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=93.9
Q ss_pred CCcccccccCCCCCCCeEEEEEeCC-CCEEEEEEcCCCCCc--------------------------c--------HH--
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWP--------------------------D--------AR-- 98 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------------------------~--------~~-- 98 (488)
|..++. ..+|.|++|.||+|++.+ |+.||||+++..... + .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 444554 568999999999999766 999999999754210 0 01
Q ss_pred ----HHHHHHHHHhccC----CCCcccEEEEEee-CCeeEEEEecCCCCCHHhhhccCCCC----CCCHHHHHHHHHHHH
Q 011353 99 ----QFLEEARAVGQLR----NRRLANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ----PMKWAMRLRVALHIA 165 (488)
Q Consensus 99 ----~~~~e~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~----~l~~~~~~~i~~qi~ 165 (488)
+|.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.+.++-.-...+ .+....+..++.|++
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 2444555555542 3333443333332 34568999999999998742111111 133333444444544
Q ss_pred HHHHHhhcCCCcccccccCcceeeCCCC----CeeeecCCCccccC
Q 011353 166 EALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNSR 207 (488)
Q Consensus 166 ~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~DfGla~~~~ 207 (488)
.. |++|+|+||.||+++.++ .+++.|||++....
T Consensus 278 -------~~-GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 -------RD-GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -------hC-CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 45 999999999999999888 99999999986554
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.4e-13 Score=116.10 Aligned_cols=127 Identities=15% Similarity=0.027 Sum_probs=95.6
Q ss_pred ccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCC-cccEEEEEeeCCeeEEEEecCCCCCHH
Q 011353 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLVAEYMPNDTLA 141 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~E~~~~gsL~ 141 (488)
+.++.|.++.||++... +..|++|....... ....+.+|+.++..+.+.+ +++++.+.. ...++||||++|.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccc
Confidence 45689999999999875 66899999765432 2234678999999986544 445665543 3458999999998775
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-----cccccccCcceeeCCCCCeeeecCCCccc
Q 011353 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-----iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
+.- . ....++.+++++|..||.. + ++|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~~~-------~---~~~~~~~~l~~~l~~LH~~-~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TED-------F---SDPENLEKIAKLLKKLHSS-PLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc-------c---cCHHHHHHHHHHHHHHhCC-CCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 431 1 1134567999999999997 6 49999999999999 67899999998753
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2e-12 Score=115.08 Aligned_cols=103 Identities=12% Similarity=0.095 Sum_probs=95.3
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHH-HhcCC--hHHHHHHHHHhHhhCCCchHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSY-LMSDM--PQEALNDASQAQVISPVWHMAAYLQA 458 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~-~~~~~--~~~A~~~~~~al~l~p~~~~a~~~~g 458 (488)
..-+...|..+...|++++|+..|++|++++|+ +..++.++|.++ ...|+ +++|.+.+++|++++|+++.+++.+|
T Consensus 73 ~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al~~LA 151 (198)
T PRK10370 73 SEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTALMLLA 151 (198)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHHHHHH
Confidence 344558899999999999999999999999999 999999999975 77787 59999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 459 AALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.+++.+|+|++|+..|+++++++|.+.
T Consensus 152 ~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 152 SDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 999999999999999999999997643
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-13 Score=133.76 Aligned_cols=127 Identities=19% Similarity=0.179 Sum_probs=71.1
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS 430 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~ 430 (488)
|..+|......+....+++.+.++....+.+. +.|+++-..+.|+.|+..|.+|+.+.|+ .+.+|.|+|.+|.++
T Consensus 221 wsnLg~~f~~~Gei~~aiq~y~eAvkldP~f~dAYiNLGnV~ke~~~~d~Avs~Y~rAl~lrpn-~A~a~gNla~iYyeq 299 (966)
T KOG4626|consen 221 WSNLGCVFNAQGEIWLAIQHYEEAVKLDPNFLDAYINLGNVYKEARIFDRAVSCYLRALNLRPN-HAVAHGNLACIYYEQ 299 (966)
T ss_pred ehhcchHHhhcchHHHHHHHHHHhhcCCCcchHHHhhHHHHHHHHhcchHHHHHHHHHHhcCCc-chhhccceEEEEecc
Confidence 33444444445555555555555555444433 5555555555555555555555555555 555555555555555
Q ss_pred CChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 431 DMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 431 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
|+.+-||..|++||+++|++++||.++|.++...|+..||..+|.+||.+.|
T Consensus 300 G~ldlAI~~Ykral~~~P~F~~Ay~NlanALkd~G~V~ea~~cYnkaL~l~p 351 (966)
T KOG4626|consen 300 GLLDLAIDTYKRALELQPNFPDAYNNLANALKDKGSVTEAVDCYNKALRLCP 351 (966)
T ss_pred ccHHHHHHHHHHHHhcCCCchHHHhHHHHHHHhccchHHHHHHHHHHHHhCC
Confidence 5555555555555555555555555555555555555555555555555544
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.6e-13 Score=124.13 Aligned_cols=103 Identities=25% Similarity=0.374 Sum_probs=96.0
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC---CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV---SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 457 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (488)
.....+.+|+.+|+.|+|..|.+.|+.||.+||++ ++.+|.|+|.+..++|+.++|+.+++.|++|||.+.+|+..+
T Consensus 248 ~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall~r 327 (486)
T KOG0550|consen 248 KLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALLRR 327 (486)
T ss_pred HHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHHHH
Confidence 34455699999999999999999999999999983 577899999999999999999999999999999999999999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 458 AAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
|.|+..+++|++|+++|++|++++..
T Consensus 328 a~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 328 ANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999998743
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.8e-13 Score=133.31 Aligned_cols=244 Identities=16% Similarity=0.105 Sum_probs=179.1
Q ss_pred cccccccCCCCCCCeEEEEEe--CCCCEEEEEEcCCCCCccHH--HHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWPDAR--QFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 132 (488)
+...+..||.|.|+.|++... .++..+++|.+......... .-+.|+.+...+ .|.++++....|......+|--
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~ 345 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL 345 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence 445677889999999999884 46789999998765443322 245677777777 5999999888888888888999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC-CCeeeecCCCccccCCCCc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDGRS 211 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~DfGla~~~~~~~~ 211 (488)
|||.++++...+. ....+++..++++..|++.++.++|++ .++|+|+||+||++..+ +..+++|||....+.....
T Consensus 346 e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~-~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~ 422 (524)
T KOG0601|consen 346 EFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSK-LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG 422 (524)
T ss_pred hhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccch-hhhcccccccceeeccchhhhhccccccccccceecc
Confidence 9999998877662 245678888999999999999999998 99999999999999875 8889999999865332221
Q ss_pred --cccCCCC-CCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 212 --YSTNLAF-TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 212 --~~~~~~y-~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
...+..| .++.......+..+.|++|||..+.+.+++....... .. ...+... .....+ .....+..+
T Consensus 423 ~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-~~------~~~i~~~-~~p~~~-~~~~~~q~~ 493 (524)
T KOG0601|consen 423 VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-VQ------SLTIRSG-DTPNLP-GLKLQLQVL 493 (524)
T ss_pred cccccccccccchhhccccccccccccccccccccccccCcccCccc-cc------ceeeecc-cccCCC-chHHhhhhh
Confidence 1223334 3455555566888999999999999999998543321 11 1111110 000111 223678888
Q ss_pred HHHhccCCCCCCCChHHHHHHHHhh
Q 011353 289 ASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
...+...++..||.+.++..+....
T Consensus 494 ~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 494 LKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred hhhhcCCccccchhhhhhcccchhh
Confidence 9999999999999999888775543
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-12 Score=95.68 Aligned_cols=67 Identities=22% Similarity=0.195 Sum_probs=63.1
Q ss_pred CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCC-CHHHHHHHHHHHHcccc
Q 011353 416 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG-KENEAQAALREASILEN 482 (488)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~ld~ 482 (488)
++..|.++|.++..+|+|++|+..|++|++++|+++.+|+++|.+|..+| ++++|+++|++|+++||
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 67889999999999999999999999999999999999999999999999 79999999999999987
|
... |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.8e-12 Score=110.08 Aligned_cols=136 Identities=10% Similarity=0.115 Sum_probs=99.5
Q ss_pred ccCCCCCCCeEEEEEeCC-------CCEEEEEEcCCCCC---------------------cc-HHHH----HHHHHHHhc
Q 011353 63 SEHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAW---------------------PD-ARQF----LEEARAVGQ 109 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~---------------------~~-~~~~----~~e~~~l~~ 109 (488)
+.+|.|--+.||.|...+ +..+|||+.+.... .+ ...+ .+|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 567999999999998442 47999998742110 01 1122 379999999
Q ss_pred cC--CCCcccEEEEEeeCCeeEEEEecCCCCCHHh-hhccCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCcccccccCc
Q 011353 110 LR--NRRLANLLGCCCEGDERLLVAEYMPNDTLAK-HLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAY 185 (488)
Q Consensus 110 l~--h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~iiH~Dlkp~ 185 (488)
+. .-+++..+++ ..-+|||||+.+..+.. .+. ...++......+..+++.+|..| |.. |+||+||++.
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~-glVHGDLs~~ 154 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKEC-NLVHADLSEY 154 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHH
Confidence 95 3567777765 34589999997653322 232 22355566778889999999999 777 9999999999
Q ss_pred ceeeCCCCCeeeecCCCccccC
Q 011353 186 RIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 186 Nill~~~~~~kl~DfGla~~~~ 207 (488)
|||++ ++.+.|+|||.+....
T Consensus 155 NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HEEEE-CCcEEEEECCCceeCC
Confidence 99997 4789999999876554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.8e-12 Score=116.30 Aligned_cols=106 Identities=23% Similarity=0.300 Sum_probs=98.6
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhc---CCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 456 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (488)
+.+.+++..||.+|+.++|..|+..|+++|+. ||+.++.+|.|||.|.+.+|+|..||+|+.+|++++|.+.+|+++
T Consensus 79 E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~R 158 (390)
T KOG0551|consen 79 EQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYIR 158 (390)
T ss_pred HHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhh
Confidence 35778999999999999999999999999976 566688999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 457 QAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
-|.|++.+.++++|..+.+..+++|.+.+
T Consensus 159 ~Akc~~eLe~~~~a~nw~ee~~~~d~e~K 187 (390)
T KOG0551|consen 159 GAKCLLELERFAEAVNWCEEGLQIDDEAK 187 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhHHHH
Confidence 99999999999999999999999876543
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-11 Score=107.02 Aligned_cols=135 Identities=9% Similarity=-0.012 Sum_probs=105.5
Q ss_pred hHHHHHHHHhcCCCccchhhhhhhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHH
Q 011353 349 TAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRS 424 (488)
Q Consensus 349 ~~~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~ 424 (488)
......--.+|+...+.+....+...+.++++.+++.. -++..+.+.|+.+.|-+.|++|+.++|+ +..+++|-|
T Consensus 32 ~~aa~arlqLal~YL~~gd~~~A~~nlekAL~~DPs~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG 110 (250)
T COG3063 32 NEAAKARLQLALGYLQQGDYAQAKKNLEKALEHDPSYYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYG 110 (250)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhh
Confidence 34555566677777777777777777777777776665 6777778888888888888888888888 888888888
Q ss_pred HHHHhcCChHHHHHHHHHhHhh--CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 425 LSYLMSDMPQEALNDASQAQVI--SPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 425 ~~~~~~~~~~~A~~~~~~al~l--~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.-+..+|+|++|...|++|+.. .|..++.|-|+|.|-.++|+++.|.++|+++|++||..
T Consensus 111 ~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN~G~Cal~~gq~~~A~~~l~raL~~dp~~ 172 (250)
T COG3063 111 AFLCAQGRPEEAMQQFERALADPAYGEPSDTLENLGLCALKAGQFDQAEEYLKRALELDPQF 172 (250)
T ss_pred HHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhhhHHHHhhcCCchhHHHHHHHHHHhCcCC
Confidence 8888888888888888888764 23337788888888888888888888888888888754
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.6e-11 Score=106.38 Aligned_cols=98 Identities=14% Similarity=0.008 Sum_probs=93.6
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
+....++|..+++.||+..|...+++||+.||+ +..+|..+|.+|...|+.+.|-+.|++|++++|++.+.++|.|..+
T Consensus 35 a~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~FL 113 (250)
T COG3063 35 AKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGAFL 113 (250)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhHHH
Confidence 344558899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHcc
Q 011353 462 FALGKENEAQAALREASIL 480 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l 480 (488)
+..|++++|.+.|++|+..
T Consensus 114 C~qg~~~eA~q~F~~Al~~ 132 (250)
T COG3063 114 CAQGRPEEAMQQFERALAD 132 (250)
T ss_pred HhCCChHHHHHHHHHHHhC
Confidence 9999999999999999964
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-11 Score=130.07 Aligned_cols=100 Identities=25% Similarity=0.348 Sum_probs=94.3
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..++.+|+.+++.|+|++|+..|++||+++|+ ...|.++|.||..+|++++|++++++|++++|+++++|+++|.+
T Consensus 126 ~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~a~a 203 (615)
T TIGR00990 126 YAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRANA 203 (615)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4567889999999999999999999999999997 67899999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHcccc
Q 011353 461 LFALGKENEAQAALREASILEN 482 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~ 482 (488)
|..+|++++|+.+|..++.+++
T Consensus 204 ~~~lg~~~eA~~~~~~~~~~~~ 225 (615)
T TIGR00990 204 YDGLGKYADALLDLTASCIIDG 225 (615)
T ss_pred HHHcCCHHHHHHHHHHHHHhCC
Confidence 9999999999999998887764
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.31 E-value=4e-11 Score=94.06 Aligned_cols=106 Identities=18% Similarity=0.193 Sum_probs=95.8
Q ss_pred hhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc----hHH
Q 011353 378 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW----HMA 453 (488)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~----~~a 453 (488)
.++....+-.+|..+...|+.+.|++.|.++|.+-|. ++.+|+|++.++..+|+.++|+.++++|+++.-+. -.+
T Consensus 39 ~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa 117 (175)
T KOG4555|consen 39 AIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQA 117 (175)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHH
Confidence 3445556668899999999999999999999999999 99999999999999999999999999999997654 568
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 454 AYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 454 ~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
|..+|.+|..+|+-+.|..+|+.|.++..+.
T Consensus 118 ~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~F 148 (175)
T KOG4555|consen 118 FVQRGLLYRLLGNDDAARADFEAAAQLGSKF 148 (175)
T ss_pred HHHHHHHHHHhCchHHHHHhHHHHHHhCCHH
Confidence 8999999999999999999999999987543
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.30 E-value=6e-12 Score=109.12 Aligned_cols=100 Identities=22% Similarity=0.305 Sum_probs=96.2
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 459 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (488)
..+.+++..|+.++..+.|..|+..|.+||.++|. .+.+|.|++.||+++++++.+..++.+|++++|+.++++|.+|.
T Consensus 8 ~~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~ 86 (284)
T KOG4642|consen 8 ESAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQ 86 (284)
T ss_pred hHHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHH
Confidence 45678889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHcc
Q 011353 460 ALFALGKENEAQAALREASIL 480 (488)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l 480 (488)
++.....|++||..+++|..+
T Consensus 87 ~~l~s~~~~eaI~~Lqra~sl 107 (284)
T KOG4642|consen 87 WLLQSKGYDEAIKVLQRAYSL 107 (284)
T ss_pred HHHhhccccHHHHHHHHHHHH
Confidence 999999999999999999765
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.7e-11 Score=106.67 Aligned_cols=104 Identities=18% Similarity=0.123 Sum_probs=93.8
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHh--------cCCCC---------CHHHHhhHHHHHHhcCChHHHHHHHHH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFID--------VGTMV---------SPTAFARRSLSYLMSDMPQEALNDASQ 442 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--------~~p~~---------~~~~~~~~~~~~~~~~~~~~A~~~~~~ 442 (488)
...+.+.++||.+|+.|+|.+|...|..||. -.|.. ...++.|.+.|++..|+|-++++.+..
T Consensus 176 kav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~yevleh~se 255 (329)
T KOG0545|consen 176 KAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEYYEVLEHCSE 255 (329)
T ss_pred hhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHHHHHHHHHHH
Confidence 3456777999999999999999999999982 23430 445799999999999999999999999
Q ss_pred hHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 443 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 443 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
+|+.+|++.+|||++|.++....+.++|.++|.++|++||.
T Consensus 256 iL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldps 296 (329)
T KOG0545|consen 256 ILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPS 296 (329)
T ss_pred HHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChh
Confidence 99999999999999999999999999999999999999985
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.5e-11 Score=114.64 Aligned_cols=125 Identities=12% Similarity=0.049 Sum_probs=89.7
Q ss_pred HHHHHhcCCCccchhhhhhhhhhhhhhHhhhh----HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHH
Q 011353 353 EILEKLGYKDDEGAATELSFQMWTGQMQETLN----SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYL 428 (488)
Q Consensus 353 ~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~ 428 (488)
..+..+|......+....+...+.+++...++ +..+|..+...|+|++|++.|++|++++|+ +..+|.++|.++.
T Consensus 65 ~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~ 143 (296)
T PRK11189 65 QLHYERGVLYDSLGLRALARNDFSQALALRPDMADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAYLNRGIALY 143 (296)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHH
Confidence 34445555444445555666666666665444 348999999999999999999999999999 8999999999999
Q ss_pred hcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHc
Q 011353 429 MSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASI 479 (488)
Q Consensus 429 ~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 479 (488)
..|++++|+++++++++++|+++...... ..+...+++++|+..|++++.
T Consensus 144 ~~g~~~eA~~~~~~al~~~P~~~~~~~~~-~l~~~~~~~~~A~~~l~~~~~ 193 (296)
T PRK11189 144 YGGRYELAQDDLLAFYQDDPNDPYRALWL-YLAESKLDPKQAKENLKQRYE 193 (296)
T ss_pred HCCCHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHccCCHHHHHHHHHHHHh
Confidence 99999999999999999888775211111 122344556666666655443
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-11 Score=112.46 Aligned_cols=104 Identities=17% Similarity=0.229 Sum_probs=99.2
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 459 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (488)
.++......|+.++..|++..|+..|-.||++||+ +..+++.||.+|+.+|+-..|+.+++++|++.|++..|-..+|.
T Consensus 36 advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQRg~ 114 (504)
T KOG0624|consen 36 ADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQRGV 114 (504)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHHhch
Confidence 45566678999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHcccccc
Q 011353 460 ALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
++.++|++++|..+|++.|+.+|.+
T Consensus 115 vllK~Gele~A~~DF~~vl~~~~s~ 139 (504)
T KOG0624|consen 115 VLLKQGELEQAEADFDQVLQHEPSN 139 (504)
T ss_pred hhhhcccHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999854
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.6e-11 Score=127.97 Aligned_cols=96 Identities=11% Similarity=0.145 Sum_probs=52.7
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGK 466 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 466 (488)
.+|..++..|++++|+..|+++++++|+ +..+|+++|.++..+|++++|+.+|+++++++|++..+++++|.+++.+|+
T Consensus 370 ~la~~~~~~g~~~eA~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~kal~l~P~~~~~~~~la~~~~~~g~ 448 (615)
T TIGR00990 370 KRASMNLELGDPDKAEEDFDKALKLNSE-DPDIYYHRAQLHFIKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQYKEGS 448 (615)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHCCC
Confidence 4555555555555555555555555555 555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHHHHHccccc
Q 011353 467 ENEAQAALREASILENK 483 (488)
Q Consensus 467 ~~~A~~~~~~al~ld~~ 483 (488)
+++|+..|++++++.|+
T Consensus 449 ~~eA~~~~~~al~~~P~ 465 (615)
T TIGR00990 449 IASSMATFRRCKKNFPE 465 (615)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 55555555555555443
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=5e-11 Score=100.83 Aligned_cols=131 Identities=18% Similarity=0.182 Sum_probs=97.6
Q ss_pred cCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--c------HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--D------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.+++|+-+.+|.+.+-+ ..+.+|.--..... . ..+-.+|+.++.+++--.|..-.=+..+.+...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 35789999999997644 34666653222111 1 234678999999997555555555556677779999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
+|..|.+.+... ...++..+-.-+.-||.. ||+|+||.++||+++++. +.++||||+...
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~-givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKA-GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhc-CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 999998888542 255677777778889998 999999999999998654 999999998643
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.7e-11 Score=109.83 Aligned_cols=140 Identities=17% Similarity=0.178 Sum_probs=108.5
Q ss_pred ccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCC--CCcccEEEEEeeCC---eeEEEEecCC
Q 011353 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRN--RRLANLLGCCCEGD---ERLLVAEYMP 136 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~---~~~lv~E~~~ 136 (488)
..+|.|..+.||++...+|..+++|....... .....+.+|+.++..+.+ .++++++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 45689999999999976777899999865432 134568899999999965 45677888776542 5689999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------ 174 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------------ 174 (488)
|.++.+.+.. ..++......++.+++++|..||+.
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9988776531 3467777778888888888888741
Q ss_pred -------------CCcccccccCcceeeCC--CCCeeeecCCCccc
Q 011353 175 -------------ERALYHDLNAYRIVFDD--DVNPRLSCFGLMKN 205 (488)
Q Consensus 175 -------------~~iiH~Dlkp~Nill~~--~~~~kl~DfGla~~ 205 (488)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 24699999999999988 56689999998754
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.8e-12 Score=94.55 Aligned_cols=82 Identities=22% Similarity=0.328 Sum_probs=74.8
Q ss_pred hcCHHHHHHHHHHHHhcCCCC-CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHH
Q 011353 395 HKDFRASIECYTQFIDVGTMV-SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAA 473 (488)
Q Consensus 395 ~~~~~~A~~~~~~ai~~~p~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~ 473 (488)
.|+|+.|+..|+++++.+|.. +..+++.+|.||+++|+|++|+..+++ ++.+|.++..++.+|.+++.+|+|++|++.
T Consensus 2 ~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~~ 80 (84)
T PF12895_consen 2 QGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIKA 80 (84)
T ss_dssp TT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHHH
T ss_pred CccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 689999999999999999962 466788899999999999999999999 999999999999999999999999999999
Q ss_pred HHHH
Q 011353 474 LREA 477 (488)
Q Consensus 474 ~~~a 477 (488)
|++|
T Consensus 81 l~~~ 84 (84)
T PF12895_consen 81 LEKA 84 (84)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9986
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.27 E-value=8e-12 Score=123.29 Aligned_cols=133 Identities=14% Similarity=0.109 Sum_probs=120.6
Q ss_pred HHHHHHhcCCCccchhhhhhhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHH
Q 011353 352 HEILEKLGYKDDEGAATELSFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSY 427 (488)
Q Consensus 352 ~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~ 427 (488)
++.|-.+|-+..-.+..+.+++.+.++++..+.+. ..|..+....+|+.|...|++||..+|+ ...+|+-+|.+|
T Consensus 421 PesWca~GNcfSLQkdh~~Aik~f~RAiQldp~faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy 499 (638)
T KOG1126|consen 421 PESWCALGNCFSLQKDHDTAIKCFKRAIQLDPRFAYAYTLLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVY 499 (638)
T ss_pred cHHHHHhcchhhhhhHHHHHHHHHHHhhccCCccchhhhhcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhhe
Confidence 35566677777778888999999999999888665 8899999999999999999999999999 899999999999
Q ss_pred HhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 428 LMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 428 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.++++++.|.-+|++|+++||.+.......|.++..+|+.++|+..|++|+.+||++.
T Consensus 500 ~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~~~~~k~~d~AL~~~~~A~~ld~kn~ 557 (638)
T KOG1126|consen 500 LKQEKLEFAEFHFQKAVEINPSNSVILCHIGRIQHQLKRKDKALQLYEKAIHLDPKNP 557 (638)
T ss_pred eccchhhHHHHHHHhhhcCCccchhHHhhhhHHHHHhhhhhHHHHHHHHHHhcCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999764
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.4e-12 Score=122.97 Aligned_cols=104 Identities=24% Similarity=0.324 Sum_probs=99.9
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..++.+|+.+++.++|+.|+..|.+||+++|+ ++.++.+|+.++.+.++|..|+.|+.+||+++|.+.++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 3567789999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccccccc
Q 011353 461 LFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
...++++.+|+.+|+++..+.|++.
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~ 106 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDP 106 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcH
Confidence 9999999999999999999998764
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=8e-11 Score=99.04 Aligned_cols=144 Identities=16% Similarity=0.124 Sum_probs=104.0
Q ss_pred ccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.+..+-+|+-+.|+++.+ .|+...||.--..... ...+.++|+++|.++.--.|.--.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 344457888889999988 4556667753221111 1345788999999997555555445566677778999
Q ss_pred ecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC---CeeeecCCCcccc
Q 011353 133 EYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNS 206 (488)
Q Consensus 133 E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~DfGla~~~ 206 (488)
||++| .++.+++...............++..|-..+.-||.. ++||+||..+||++..++ .+.++|||++...
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n-diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN-DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99987 5788888653333333444478889999999999998 999999999999995443 4689999997543
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-10 Score=112.69 Aligned_cols=215 Identities=18% Similarity=0.161 Sum_probs=155.7
Q ss_pred CCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEee----CCeeEEEEecCCC-CCHHhh
Q 011353 70 PNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVAEYMPN-DTLAKH 143 (488)
Q Consensus 70 ~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~E~~~~-gsL~~~ 143 (488)
-.+.||++ ..+|..+++|+++............-++.++++.|+|||++..+|.. +..+++|++|.|+ ++|.+.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 35789999 66899999999954433333223455788999999999999998863 4568999999886 678776
Q ss_pred hccC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 144 LFHW-------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 144 l~~~-------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
.... .+...++..+|.++.|+..||.++|+. |+..+-|.+.+||++.+.+++|+..|.........
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss-GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~ 447 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS-GLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP 447 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc-CceeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence 5432 122467889999999999999999998 99999999999999999899998888755443322
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
. +.+. -..+-|.=-||.+++-|.||..--. ............+....+.++.+++.
T Consensus 448 --------~--~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~-----------~~d~~~~s~~~~I~~~yS~D~rn~v~ 503 (655)
T KOG3741|consen 448 --------T--EPLE---SQQQNDLRDLGLLLLALATGTENSN-----------RTDSTQSSHLTRITTTYSTDLRNVVE 503 (655)
T ss_pred --------C--cchh---HHhhhhHHHHHHHHHHHhhcccccc-----------cccchHHHHHHHhhhhhhHHHHHHHH
Confidence 0 1111 1236788899999999999963211 00111111011233446788999999
Q ss_pred HhccCCCCCCCChHHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L 310 (488)
.....++++ -+..+++.++
T Consensus 504 yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 504 YLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHhcCccc-ccHHHHHHHH
Confidence 999999997 6788888764
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.5e-11 Score=89.77 Aligned_cols=66 Identities=21% Similarity=0.372 Sum_probs=63.2
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcC-ChHHHHHHHHHhHhhCC
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-MPQEALNDASQAQVISP 448 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~l~p 448 (488)
+..+..+|..++..|+|++|+..|++||+++|+ +..+|+++|.||..+| ++++|++++++|++++|
T Consensus 3 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 3 AEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 456778999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.1e-12 Score=130.97 Aligned_cols=243 Identities=15% Similarity=0.107 Sum_probs=168.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
+....+++-+-+|+++.++.+.- ..|...++|+..... ..+.+....+-.++-..+||.+++..--+......+++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 33445566667899999988873 334444555443211 11122222333333334556666655555566778999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC---
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 208 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~--- 208 (488)
++|..+++|...|+. .+..+..........+...++|||.. .++|+|++|.|+|+..+++.+++|||.......
T Consensus 883 ~~~~~~~~~~Skl~~--~~~~saepaRs~i~~~vqs~e~L~s~-~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHN--SGCLSAEPARSPILERVQSLESLHSS-LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hHHhccCCchhhhhc--CCCcccccccchhHHHHhhhhccccc-hhhcccccccchhhcccCCcccCccccccccccccC
Confidence 999999999999875 33456555666777888999999997 799999999999999999999999984322100
Q ss_pred --------------------------------CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh
Q 011353 209 --------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA 256 (488)
Q Consensus 209 --------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 256 (488)
.....+|+.|.+||.+.+......+|.|++|++++|.++|..||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 001245789999999999999999999999999999999998887654
Q ss_pred hHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChH
Q 011353 257 LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304 (488)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 304 (488)
.+.+-+......... ...+...+.+..+++...+..+|.+|-.+.
T Consensus 1040 pq~~f~ni~~~~~~~---p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPW---PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhhhhccccCCCCC---CCCccccChhhhhhhhhhhccCchhccCcc
Confidence 443332222222111 122344567899999999999999997655
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.5e-10 Score=94.37 Aligned_cols=101 Identities=17% Similarity=0.136 Sum_probs=93.3
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC---HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc---hHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW---HMAAYLQ 457 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~~~ 457 (488)
.+...|..+++.|++++|++.|.+++...|+ + ..+++.+|.++.+.|++++|+..+++++..+|++ +.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~ 82 (119)
T TIGR02795 4 AYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLKL 82 (119)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHHH
Confidence 4567899999999999999999999999987 4 5789999999999999999999999999999986 6789999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 458 AAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|.++..+|++++|+..|+++++..|+..
T Consensus 83 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 110 (119)
T TIGR02795 83 GMSLQELGDKEKAKATLQQVIKRYPGSS 110 (119)
T ss_pred HHHHHHhCChHHHHHHHHHHHHHCcCCh
Confidence 9999999999999999999999988654
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.8e-11 Score=107.67 Aligned_cols=131 Identities=15% Similarity=0.166 Sum_probs=116.4
Q ss_pred hHHHHHHHHhcCCCccchhhhhhhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHH
Q 011353 349 TAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRS 424 (488)
Q Consensus 349 ~~~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~ 424 (488)
...++-|...|-...+...++.++..|+++|+..+... +|+.+|.+.|.|+.|+++...||.+||. ...+|.++|
T Consensus 78 ~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~-yskay~RLG 156 (304)
T KOG0553|consen 78 KALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPTNAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPH-YSKAYGRLG 156 (304)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhcchHHHHHHHHHHHhcChH-HHHHHHHHH
Confidence 46677788888888888899999999999999876655 9999999999999999999999999999 999999999
Q ss_pred HHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHH---HHHHHHHHHHcc
Q 011353 425 LSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKEN---EAQAALREASIL 480 (488)
Q Consensus 425 ~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~---~A~~~~~~al~l 480 (488)
.+|..+|++++|++.|+|||+++|++...+-++..+-.++++.. .+...++-+..+
T Consensus 157 ~A~~~~gk~~~A~~aykKaLeldP~Ne~~K~nL~~Ae~~l~e~~~~~~~~~~~d~~~~i 215 (304)
T KOG0553|consen 157 LAYLALGKYEEAIEAYKKALELDPDNESYKSNLKIAEQKLNEPKSSAQASGSFDMAGLI 215 (304)
T ss_pred HHHHccCcHHHHHHHHHhhhccCCCcHHHHHHHHHHHHHhcCCCcccccccchhhhhhc
Confidence 99999999999999999999999999999999999999888876 555555554444
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1e-10 Score=126.74 Aligned_cols=117 Identities=10% Similarity=-0.052 Sum_probs=103.5
Q ss_pred hhhhhhhhhhhhHhh---hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhH
Q 011353 368 TELSFQMWTGQMQET---LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQ 444 (488)
Q Consensus 368 ~~~a~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 444 (488)
.+.+...+.+++... ..+...|..+.+.|++++|+..|+++++++|+ +..+++++|.++..+|++++|++.|++|+
T Consensus 592 ~~eAl~~~~~AL~l~P~~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL 670 (987)
T PRK09782 592 PELALNDLTRSLNIAPSANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAH 670 (987)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 344444455444433 33448899999999999999999999999999 99999999999999999999999999999
Q ss_pred hhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 445 VISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 445 ~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+++|+++.+++++|.++..+|++++|+.+|++|++++|+..
T Consensus 671 ~l~P~~~~a~~nLA~al~~lGd~~eA~~~l~~Al~l~P~~a 711 (987)
T PRK09782 671 KGLPDDPALIRQLAYVNQRLDDMAATQHYARLVIDDIDNQA 711 (987)
T ss_pred HhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCc
Confidence 99999999999999999999999999999999999998653
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.5e-11 Score=121.61 Aligned_cols=88 Identities=18% Similarity=0.153 Sum_probs=64.0
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHH
Q 011353 396 KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALR 475 (488)
Q Consensus 396 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~ 475 (488)
+++++|+..+++|++++|+ +..+|..+|.++..+|++++|+..|++|++++|+++.+|+.+|.++..+|++++|+..|+
T Consensus 318 ~~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~ 396 (553)
T PRK12370 318 NAMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTIN 396 (553)
T ss_pred hHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4467777777777777777 777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHcccccc
Q 011353 476 EASILENKK 484 (488)
Q Consensus 476 ~al~ld~~~ 484 (488)
+|++++|..
T Consensus 397 ~Al~l~P~~ 405 (553)
T PRK12370 397 ECLKLDPTR 405 (553)
T ss_pred HHHhcCCCC
Confidence 777777653
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.3e-10 Score=89.78 Aligned_cols=98 Identities=23% Similarity=0.319 Sum_probs=93.1
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 464 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 464 (488)
+...|..++..|++++|+..++++++..|. +..++..+|.++...+++++|++.+++++++.|.+..+++.+|.++...
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (100)
T cd00189 3 LLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYKL 81 (100)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH
Confidence 446788999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccccc
Q 011353 465 GKENEAQAALREASILENK 483 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld~~ 483 (488)
|++++|...++++++++|+
T Consensus 82 ~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 82 GKYEEALEAYEKALELDPN 100 (100)
T ss_pred HhHHHHHHHHHHHHccCCC
Confidence 9999999999999998873
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.4e-11 Score=118.07 Aligned_cols=96 Identities=19% Similarity=0.250 Sum_probs=93.6
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGK 466 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 466 (488)
-.|..++-.|+|+.|+.+|+.||..+|+ +..+|+++|..+..-.+.++||+.|.+|++|.|+++.+.||+|..+..+|.
T Consensus 435 ~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgIS~mNlG~ 513 (579)
T KOG1125|consen 435 GLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGISCMNLGA 513 (579)
T ss_pred hhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhhhhhhhhh
Confidence 6799999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccccc
Q 011353 467 ENEAQAALREASILENK 483 (488)
Q Consensus 467 ~~~A~~~~~~al~ld~~ 483 (488)
|+||+++|-.||.+-++
T Consensus 514 ykEA~~hlL~AL~mq~k 530 (579)
T KOG1125|consen 514 YKEAVKHLLEALSMQRK 530 (579)
T ss_pred HHHHHHHHHHHHHhhhc
Confidence 99999999999999765
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.3e-11 Score=98.90 Aligned_cols=106 Identities=11% Similarity=0.062 Sum_probs=87.8
Q ss_pred cCCCccchhhhhhhhhhhhhhHhhh----hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChH
Q 011353 359 GYKDDEGAATELSFQMWTGQMQETL----NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQ 434 (488)
Q Consensus 359 g~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~ 434 (488)
|......+....+...+...+...+ .+..+|..+...|+|++|+..|++|++++|+ ++.+++++|.|+..+|+++
T Consensus 31 g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~ 109 (144)
T PRK15359 31 GYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPG 109 (144)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHH
Confidence 4333334444555555555554433 3449999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHhHhhCCCchHHHHHHHHHHHHCC
Q 011353 435 EALNDASQAQVISPVWHMAAYLQAAALFALG 465 (488)
Q Consensus 435 ~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 465 (488)
+|+..|++|++++|+++..+.++|.+...++
T Consensus 110 eAi~~~~~Al~~~p~~~~~~~~~~~~~~~l~ 140 (144)
T PRK15359 110 LAREAFQTAIKMSYADASWSEIRQNAQIMVD 140 (144)
T ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876543
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.6e-10 Score=98.09 Aligned_cols=104 Identities=15% Similarity=0.119 Sum_probs=93.6
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC--CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 459 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (488)
+..+...|..+...|++++|+..|++++++.|+. ...++.++|.++..+|++++|+..+++|++++|++..++..+|.
T Consensus 35 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 114 (172)
T PRK02603 35 AFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALNNIAV 114 (172)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3445688999999999999999999999987762 24789999999999999999999999999999999999999999
Q ss_pred HHHHCCC--------------HHHHHHHHHHHHccccccc
Q 011353 460 ALFALGK--------------ENEAQAALREASILENKKS 485 (488)
Q Consensus 460 ~~~~~~~--------------~~~A~~~~~~al~ld~~~~ 485 (488)
+|..+|+ +++|++.++++++++|++.
T Consensus 115 ~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~~ 154 (172)
T PRK02603 115 IYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNNY 154 (172)
T ss_pred HHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchhH
Confidence 9999988 6889999999999998753
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2e-10 Score=109.40 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=95.7
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
+..+..+|.-++-.|++-+|-+.|+++|+++|. +...|..+|..|....+.++-+.+|.+|..+||.+++.||.+|.++
T Consensus 326 A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~ 404 (606)
T KOG0547|consen 326 AEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMR 404 (606)
T ss_pred HHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHH
Confidence 455568899999999999999999999999999 7777999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHccccccc
Q 011353 462 FALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+-+++|++|+++|++|+.|+|+++
T Consensus 405 flL~q~e~A~aDF~Kai~L~pe~~ 428 (606)
T KOG0547|consen 405 FLLQQYEEAIADFQKAISLDPENA 428 (606)
T ss_pred HHHHHHHHHHHHHHHHhhcChhhh
Confidence 999999999999999999999765
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.15 E-value=9.3e-10 Score=104.91 Aligned_cols=117 Identities=6% Similarity=-0.051 Sum_probs=101.5
Q ss_pred hhhhhhhhhhhhHhhhhH----HHhhhHHHhhc-CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCCh--HHHHHHH
Q 011353 368 TELSFQMWTGQMQETLNS----KKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMP--QEALNDA 440 (488)
Q Consensus 368 ~~~a~~~~~~~~~~~~~~----~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~--~~A~~~~ 440 (488)
.+.++.....+++..+.. ..||..+...+ ++++|+..++++|+.+|+ +..+|++++.++.++|+. ++++..+
T Consensus 53 serAL~lt~~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~~~l~~l~~~~~~~el~~~ 131 (320)
T PLN02789 53 SPRALDLTADVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRRWLAEKLGPDAANKELEFT 131 (320)
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHHHHHHHcCchhhHHHHHHH
Confidence 344555555555544433 38899998888 689999999999999999 999999999999999874 7899999
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 441 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+++++++|++..||..+|.++..+|+|++|++++.+++++||.+.
T Consensus 132 ~kal~~dpkNy~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~ 176 (320)
T PLN02789 132 RKILSLDAKNYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNN 176 (320)
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCch
Confidence 999999999999999999999999999999999999999998764
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.4e-10 Score=96.07 Aligned_cols=105 Identities=15% Similarity=0.097 Sum_probs=90.0
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC--CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 457 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (488)
..+..+...|..+...|+|++|+..|++|+.+.|+. ...+|.++|.++..+|++++|+..+++|++++|.+..++.++
T Consensus 33 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~~l 112 (168)
T CHL00033 33 KEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNNM 112 (168)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHH
Confidence 345566688999999999999999999999997662 235899999999999999999999999999999999999999
Q ss_pred HHHHH-------HCCCHH-------HHHHHHHHHHcccccc
Q 011353 458 AAALF-------ALGKEN-------EAQAALREASILENKK 484 (488)
Q Consensus 458 g~~~~-------~~~~~~-------~A~~~~~~al~ld~~~ 484 (488)
|.++. .+|+++ +|+..|++++.++|.+
T Consensus 113 a~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~ 153 (168)
T CHL00033 113 AVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN 153 (168)
T ss_pred HHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 99999 777876 6666666777788743
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.8e-10 Score=106.25 Aligned_cols=111 Identities=17% Similarity=0.129 Sum_probs=99.7
Q ss_pred hhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhh
Q 011353 371 SFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 446 (488)
Q Consensus 371 a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l 446 (488)
+..-+..++...+... ..|..++..++-..|++.|++|++++|. +..+|+-+|.+|..++.+.-|+-+|++|+++
T Consensus 349 Av~YFkRALkLNp~~~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~-DyRAWYGLGQaYeim~Mh~YaLyYfqkA~~~ 427 (559)
T KOG1155|consen 349 AVMYFKRALKLNPKYLSAWTLMGHEYVEMKNTHAAIESYRRAVDINPR-DYRAWYGLGQAYEIMKMHFYALYYFQKALEL 427 (559)
T ss_pred HHHHHHHHHhcCcchhHHHHHhhHHHHHhcccHHHHHHHHHHHhcCch-hHHHHhhhhHHHHHhcchHHHHHHHHHHHhc
Confidence 3334444554444433 8899999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 447 SPVWHMAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 447 ~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
.|++...|..+|.||.++++.++|+++|++|+....
T Consensus 428 kPnDsRlw~aLG~CY~kl~~~~eAiKCykrai~~~d 463 (559)
T KOG1155|consen 428 KPNDSRLWVALGECYEKLNRLEEAIKCYKRAILLGD 463 (559)
T ss_pred CCCchHHHHHHHHHHHHhccHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999998854
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.3e-10 Score=102.94 Aligned_cols=132 Identities=11% Similarity=0.079 Sum_probs=98.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCCc-----------cHHHHHHHHHHHhccCCCC--cccEEEEEee-----CCeeEEEEe
Q 011353 72 VVYKGKLENQFRIAVKRFNRSAWP-----------DARQFLEEARAVGQLRNRR--LANLLGCCCE-----GDERLLVAE 133 (488)
Q Consensus 72 ~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~-----~~~~~lv~E 133 (488)
.|++..+ +|+.+.||........ ....+.+|...+..|...+ .+..++++.. ...-++|||
T Consensus 37 rvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 4667766 5668999976543311 1124789999999885443 4445666643 234689999
Q ss_pred cCCCC-CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-------CCCeeeecCCCccc
Q 011353 134 YMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-------DVNPRLSCFGLMKN 205 (488)
Q Consensus 134 ~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-------~~~~kl~DfGla~~ 205 (488)
++++. +|.+++......+.+......++.+++..+.-||.. |++|+|++++|||++. ++.+.|+||+.+..
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~-Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA-GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC-cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 99886 899998543334466677889999999999999999 9999999999999975 46799999998753
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.9e-10 Score=116.31 Aligned_cols=113 Identities=12% Similarity=-0.007 Sum_probs=90.4
Q ss_pred hhhhhhhhhhhhHhhhh----HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHh
Q 011353 368 TELSFQMWTGQMQETLN----SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQA 443 (488)
Q Consensus 368 ~~~a~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 443 (488)
...+...+.++++..++ +...|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..+++|
T Consensus 320 ~~~A~~~~~~Al~ldP~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~A 398 (553)
T PRK12370 320 MIKAKEHAIKATELDHNNPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINEC 398 (553)
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34444444444444333 336788888889999999999999999998 8888888999999999999999999999
Q ss_pred HhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccc
Q 011353 444 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481 (488)
Q Consensus 444 l~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld 481 (488)
++++|.++.+++.++.+++.+|++++|++.++++++..
T Consensus 399 l~l~P~~~~~~~~~~~~~~~~g~~eeA~~~~~~~l~~~ 436 (553)
T PRK12370 399 LKLDPTRAAAGITKLWITYYHTGIDDAIRLGDELRSQH 436 (553)
T ss_pred HhcCCCChhhHHHHHHHHHhccCHHHHHHHHHHHHHhc
Confidence 99999888887777777888889999999999888764
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.2e-10 Score=99.08 Aligned_cols=91 Identities=15% Similarity=0.123 Sum_probs=85.8
Q ss_pred hhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH-HHCCC--HHHH
Q 011353 394 RHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL-FALGK--ENEA 470 (488)
Q Consensus 394 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~-~~~~~--~~~A 470 (488)
..++.++++..++++++.+|+ +..+|..+|.+|..+|++++|+..|++|++++|+++.+++.+|.++ +..|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 368889999999999999999 9999999999999999999999999999999999999999999985 67788 5999
Q ss_pred HHHHHHHHccccccc
Q 011353 471 QAALREASILENKKS 485 (488)
Q Consensus 471 ~~~~~~al~ld~~~~ 485 (488)
++.++++++++|++.
T Consensus 130 ~~~l~~al~~dP~~~ 144 (198)
T PRK10370 130 REMIDKALALDANEV 144 (198)
T ss_pred HHHHHHHHHhCCCCh
Confidence 999999999999864
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.5e-10 Score=82.11 Aligned_cols=63 Identities=24% Similarity=0.161 Sum_probs=40.9
Q ss_pred hHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 422 RRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 422 ~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+|..+...|++++|++.|+++++.+|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 456666666666666666666666666666666666666666666666666666666666653
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.10 E-value=4e-10 Score=98.64 Aligned_cols=127 Identities=18% Similarity=0.160 Sum_probs=83.6
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCCc----------------------c----HHHHHHHHHHHhccCCC--CcccEEEEEe
Q 011353 72 VVYKGKLENQFRIAVKRFNRSAWP----------------------D----ARQFLEEARAVGQLRNR--RLANLLGCCC 123 (488)
Q Consensus 72 ~Vy~~~~~~~~~vavK~~~~~~~~----------------------~----~~~~~~e~~~l~~l~h~--niv~l~~~~~ 123 (488)
.||.|...+|..+|||+.+..... . .....+|.+.|.++..- ++++.+.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 389999888999999987432110 0 12367899999999755 577777553
Q ss_pred eCCeeEEEEecCC--CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHH-hhcCCCcccccccCcceeeCCCCCeeeecC
Q 011353 124 EGDERLLVAEYMP--NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY-CTSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (488)
Q Consensus 124 ~~~~~~lv~E~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~-LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (488)
.-.|||||++ |..+..+. + ..++......++.+++..+.. +|.. |++|+|+.+.|||++++ .+.|+||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~-~---~~~~~~~~~~~~~~il~~~~~~~~~~-givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLK-D---VDLSPEEPKELLEEILEEIIKMLHKA-GIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHH-H---CGGGGSTHHHHHHHHHHHHHHHHHCT-TEEESS-STTSEEEETT-CEEE--G
T ss_pred ---CCEEEEEecCCCccchhhHH-h---ccccchhHHHHHHHHHHHHHHHHHhc-CceecCCChhhEEeecc-eEEEEec
Confidence 2379999998 54444433 2 112234456777888886665 4677 99999999999999877 9999999
Q ss_pred CCccccCC
Q 011353 201 GLMKNSRD 208 (488)
Q Consensus 201 Gla~~~~~ 208 (488)
|.+.....
T Consensus 151 ~qav~~~~ 158 (188)
T PF01163_consen 151 GQAVDSSH 158 (188)
T ss_dssp TTEEETTS
T ss_pred CcceecCC
Confidence 98866543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.6e-10 Score=116.59 Aligned_cols=124 Identities=13% Similarity=0.031 Sum_probs=108.2
Q ss_pred HhcCCCccchhhhhhhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCC
Q 011353 357 KLGYKDDEGAATELSFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM 432 (488)
Q Consensus 357 ~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~ 432 (488)
.++......+..+.+...|....+.+++.. +.+..+.+.+.+++|+..+++++..+|+ ++.+++++|.++.++|+
T Consensus 91 ~La~i~~~~g~~~ea~~~l~~~~~~~Pd~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~-~~~~~~~~a~~l~~~g~ 169 (694)
T PRK15179 91 LVARALEAAHRSDEGLAVWRGIHQRFPDSSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSS-SAREILLEAKSWDEIGQ 169 (694)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHhcc
Confidence 333333334445666666666666666655 8999999999999999999999999999 99999999999999999
Q ss_pred hHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccc
Q 011353 433 PQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481 (488)
Q Consensus 433 ~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld 481 (488)
|++|++.|+++++.+|+++.++..+|.++..+|+.++|...|++|+++.
T Consensus 170 ~~~A~~~y~~~~~~~p~~~~~~~~~a~~l~~~G~~~~A~~~~~~a~~~~ 218 (694)
T PRK15179 170 SEQADACFERLSRQHPEFENGYVGWAQSLTRRGALWRARDVLQAGLDAI 218 (694)
T ss_pred hHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999875
|
|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.2e-11 Score=109.46 Aligned_cols=108 Identities=23% Similarity=0.273 Sum_probs=101.2
Q ss_pred hhhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHH
Q 011353 376 TGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 455 (488)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (488)
-+.++.+.+.+-++..++..|+++.|++.|..||.++|. .+..|..++.+++++++...|+.+|..|++++|+.++.|-
T Consensus 108 ee~~eqa~e~k~~A~eAln~G~~~~ai~~~t~ai~lnp~-~a~l~~kr~sv~lkl~kp~~airD~d~A~ein~Dsa~~yk 186 (377)
T KOG1308|consen 108 EEMMDQANDKKVQASEALNDGEFDTAIELFTSAIELNPP-LAILYAKRASVFLKLKKPNAAIRDCDFAIEINPDSAKGYK 186 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchhhhhcccccccccCCc-hhhhcccccceeeeccCCchhhhhhhhhhccCcccccccc
Confidence 344555667888999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 456 LQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
-+|.+...+|++++|..+|..|.++|-++
T Consensus 187 frg~A~rllg~~e~aa~dl~~a~kld~dE 215 (377)
T KOG1308|consen 187 FRGYAERLLGNWEEAAHDLALACKLDYDE 215 (377)
T ss_pred hhhHHHHHhhchHHHHHHHHHHHhccccH
Confidence 99999999999999999999999998654
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.7e-09 Score=98.97 Aligned_cols=95 Identities=8% Similarity=0.008 Sum_probs=51.6
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhC--CCchHHHHHHHHHHHHC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS--PVWHMAAYLQAAALFAL 464 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--p~~~~a~~~~g~~~~~~ 464 (488)
..|..++..|++++|++.|+++++.+|. +..++.++|.++..+|++++|++.++++++.. +.....++++|.++...
T Consensus 70 ~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 148 (234)
T TIGR02521 70 ALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLENAGLCALKA 148 (234)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHHHHHHHHHHc
Confidence 5566666666666666666666666665 55555555555555555555555555555432 23344445555555555
Q ss_pred CCHHHHHHHHHHHHcccc
Q 011353 465 GKENEAQAALREASILEN 482 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld~ 482 (488)
|++++|++.|+++++.+|
T Consensus 149 g~~~~A~~~~~~~~~~~~ 166 (234)
T TIGR02521 149 GDFDKAEKYLTRALQIDP 166 (234)
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 555555555555555444
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=91.14 Aligned_cols=97 Identities=6% Similarity=-0.052 Sum_probs=92.9
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
..+...|..+|..|+|++|...|+-...+||. +...++.+|.|+..+|+|++|+..|..|..++++++...+..|.||.
T Consensus 38 e~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agqC~l 116 (165)
T PRK15331 38 DGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQCQL 116 (165)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHHHHH
Confidence 44558899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHcc
Q 011353 463 ALGKENEAQAALREASIL 480 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~l 480 (488)
.+|+.++|+.+|+.|++.
T Consensus 117 ~l~~~~~A~~~f~~a~~~ 134 (165)
T PRK15331 117 LMRKAAKARQCFELVNER 134 (165)
T ss_pred HhCCHHHHHHHHHHHHhC
Confidence 999999999999999874
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.07 E-value=4e-10 Score=81.02 Aligned_cols=64 Identities=16% Similarity=0.163 Sum_probs=60.1
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCch
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 451 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~ 451 (488)
.+|..+++.|+|++|++.|+++++.+|+ +..+++.+|.++..+|++++|+..|+++++++|+++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 5789999999999999999999999999 999999999999999999999999999999999975
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 488 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-25 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 5e-25 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-20 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-20 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 7e-20 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-18 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 3e-18 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 6e-18 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 1e-13 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 1e-13 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-13 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-13 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-13 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-13 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-13 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 6e-13 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 8e-13 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 1e-12 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 1e-12 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-12 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 2e-12 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 5e-12 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 6e-12 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 7e-12 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 7e-12 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 7e-12 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 8e-12 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 8e-12 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 8e-12 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 8e-12 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 9e-12 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 9e-12 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-11 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 1e-11 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 1e-11 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 1e-11 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-11 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 1e-11 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-11 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 2e-11 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 2e-11 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 3e-11 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 3e-11 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 4e-11 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 4e-11 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 4e-11 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 4e-11 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 4e-11 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 5e-11 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-11 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 7e-11 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 8e-11 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 1e-10 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 1e-10 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-10 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 3e-10 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 4e-10 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-10 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 4e-10 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-10 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 4e-10 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 4e-10 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 4e-10 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 4e-10 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 5e-10 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 5e-10 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 6e-10 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 8e-10 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 9e-10 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-09 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-09 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 1e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 2e-09 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 2e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-09 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 2e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-09 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-09 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-09 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-09 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 2e-09 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-09 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-09 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-09 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 3e-09 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 3e-09 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-09 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 3e-09 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 3e-09 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 4e-09 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 5e-09 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 5e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 5e-09 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 6e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 6e-09 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 6e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 7e-09 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 7e-09 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 7e-09 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 7e-09 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 8e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 8e-09 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 9e-09 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 1e-08 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-08 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-08 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-08 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-08 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-08 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 3e-08 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 3e-08 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 3e-08 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 3e-08 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-08 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 3e-08 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 3e-08 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 4e-08 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 6e-08 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-07 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-07 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 3e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 3e-07 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 5e-07 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 7e-07 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 1e-06 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-06 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-06 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 1e-06 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 1e-06 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 1e-06 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-06 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 1e-06 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 2e-06 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-06 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-06 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-06 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-06 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-06 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-06 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 2e-06 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-06 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-06 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 2e-06 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 3e-06 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 3e-06 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-06 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 3e-06 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-06 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-06 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-06 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 3e-06 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-06 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-06 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 3e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 3e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 4e-06 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 4e-06 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 4e-06 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 6e-06 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-06 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 7e-06 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 7e-06 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 7e-06 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 8e-06 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 8e-06 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 8e-06 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 9e-06 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 9e-06 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 9e-06 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-05 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 1e-05 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 1e-05 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-05 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-05 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 2e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-05 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 2e-05 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-05 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-05 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 2e-05 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 2e-05 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-05 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-05 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 3e-05 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 3e-05 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 3e-05 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-05 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 3e-05 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 4e-05 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 4e-05 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 4e-05 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 5e-05 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-05 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 5e-05 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 5e-05 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 6e-05 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 6e-05 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 6e-05 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 6e-05 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 6e-05 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 6e-05 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-05 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 6e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 6e-05 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 6e-05 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-05 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 7e-05 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 7e-05 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 8e-05 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 8e-05 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 8e-05 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 8e-05 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-04 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 1e-04 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-04 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 2e-04 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 2e-04 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 2e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-04 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-04 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-04 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 3e-04 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-04 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 3e-04 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-04 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 3e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 3e-04 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 3e-04 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-04 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 5e-04 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 5e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 5e-04 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 5e-04 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 7e-04 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 7e-04 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 8e-04 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 8e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 3e-60
Identities = 87/310 (28%), Positives = 141/310 (45%), Gaps = 31/310 (10%)
Query: 26 DVENEEKPGVD--NVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFR 83
DV EE P V + F S+ L+ A+ F+ +NI+ G VYKG+L +
Sbjct: 3 DVPAEEDPEVHLGQLKRF---SLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTL 56
Query: 84 IAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVKR QF E + +R L L G C ERLLV YM N ++A
Sbjct: 57 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 116
Query: 143 HLF--HWETQPMKWAMRLRVALHIAEALEY--CTSKERALYHDLNAYRIVFDDDVNPRLS 198
L P+ W R R+AL A L Y + ++ D+ A I+ D++ +
Sbjct: 117 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176
Query: 199 CFGLMKNSRDGRSY-STNLAFT----PPEYLRTGRVTPESVMYSFGTLLLDLLSGK---- 249
FGL K ++ +T + T PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
Query: 250 -HIPP--------SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
L++++ ++ L D L+G + +E +L+++A C Q P ER
Sbjct: 237 LARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 296
Query: 301 PNPRSLVTAL 310
P +V L
Sbjct: 297 PKMSEVVRML 306
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 5e-59
Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 44/318 (13%)
Query: 28 ENEEKPGVD-NVPVFCEYSIETLRTATSGFAMENIVSEH---GEKAPNVVYKGKLENQFR 83
EN+ D F S L+ T+ F I GE VVYKG + N
Sbjct: 1 ENKSLEVSDTRFHSF---SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-T 56
Query: 84 IAVKRFNRSAWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
+AVK+ +QF +E + + + ++ L LLG +GD+ LV YMPN +
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116
Query: 140 LAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR------IVFDDD 192
L L + T P+ W MR ++A A + + L+ + + +R I+ D+
Sbjct: 117 LLDRLSCLDGTPPLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEA 169
Query: 193 VNPRLSCFGLMK-NSRDGRSY-STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
++S FGL + + + ++ ++ + T PE L G +TP+S +YSFG +LL+++
Sbjct: 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEII 228
Query: 247 SGK-----HIPPSHALD-----LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
+G H P LD ++ I+ D + S + +AS+CL +
Sbjct: 229 TGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEK 287
Query: 297 PRERPNPRSLVTALVTLQ 314
+RP+ + + L +
Sbjct: 288 KNKRPDIKKVQQLLQEMT 305
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 2e-57
Identities = 78/317 (24%), Positives = 140/317 (44%), Gaps = 28/317 (8%)
Query: 14 GSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVV 73
GS+Y +A D + + L AT+ F + ++ G V
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRV---PLVDLEEATNNFDHKFLI---GHGVFGKV 55
Query: 74 YKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133
YKG L + ++A+KR + +F E + R+ L +L+G C E +E +L+ +
Sbjct: 56 YKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115
Query: 134 YMPNDTLAKHLF--HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
YM N L +HL+ T M W RL + + A L Y RA+ H D+ + I+ D
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL--HTRAIIHRDVKSINILLD 173
Query: 191 DDVNPRLSCFGLMK-NSRDGRSY-STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLD 244
++ P+++ FG+ K + +++ ST + T PEY GR+T +S +YSFG +L +
Sbjct: 174 ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE 233
Query: 245 LLSGK----HIPPSH-------ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
+L + P A++ + ++ + D L + + + A +CL
Sbjct: 234 VLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 294 QYEPRERPNPRSLVTAL 310
+RP+ ++ L
Sbjct: 294 ALSSEDRPSMGDVLWKL 310
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-25
Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 34/262 (12%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
++KG+ + I VK W R F EE + + + +LG C
Sbjct: 25 ELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 130 L--VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
+ +MP +L L + + ++ AL +A + + + E + LN+
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS 143
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSY-STNLAFTP----PEYLRTGRVTPESV---MYSF 238
++ D+D+ R+S + S+ S + P PE L+ M+SF
Sbjct: 144 VMIDEDMTARISMADV------KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197
Query: 239 GTLLLDLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVRLASRCL 293
LL +L++ + + + ++ T+ + +L C+
Sbjct: 198 AVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP---------HVSKLMKICM 248
Query: 294 QYEPRERPNPRSLVTALVTLQK 315
+P +RP +V L +Q
Sbjct: 249 NEDPAKRPKFDMIVPILEKMQD 270
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 6e-25
Identities = 49/322 (15%), Positives = 105/322 (32%), Gaps = 57/322 (17%)
Query: 43 EYSIETLRTATSGFAMENIVSE--HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
+ E L + + + + G V+K +L N+ +AVK F D + +
Sbjct: 13 DLGTENLYFQSMPLQLLEVKARGRFGC-----VWKAQLLNE-YVAVKIFPIQ---DKQSW 63
Query: 101 LEEA--RAVGQLRNRRLANLLGCCCEGD----ERLLVAEYMPNDTLAKHLFHWETQPMKW 154
E ++ +++ + +G G + L+ + +L+ L + W
Sbjct: 64 QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSW 120
Query: 155 AMRLRVALHIAEALEY--------CTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN 205
+A +A L Y + A+ H D+ + ++ +++ ++ FGL
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 206 SRDGRSYSTNLAFT------PPEYLRTGRVTPESV-----MYSFGTLLLDLLSGK----- 249
G+S PE L MY+ G +L +L S
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
Query: 250 -----------HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT-ELVRLASRCLQYEP 297
I +L+ +++ + L + G L C ++
Sbjct: 241 PVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDA 300
Query: 298 RERPNPRSLVTALVTLQKDTEV 319
R + + + +Q+ T +
Sbjct: 301 EARLSAGCVGERITQMQRLTNI 322
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 3e-23
Identities = 51/264 (19%), Positives = 108/264 (40%), Gaps = 23/264 (8%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
V++ + +AVK + +FL E + +LR+ + +G +
Sbjct: 52 TVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 130 LVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI 187
+V EY+ +L + L + + RL +A +A+ + Y ++ + H +L + +
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
+ D ++ FGL + S + A TP PE LR +S +YSFG +L
Sbjct: 171 LVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 244 DLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
+L + + ++ P+ + + + + + + ++ + C EP
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP---------QVAAIIEGCWTNEPW 281
Query: 299 ERPNPRSLVTALVTLQKDTEVPSH 322
+RP+ +++ L L K P +
Sbjct: 282 KRPSFATIMDLLRPLIKSAVPPPN 305
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 5e-21
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 38/266 (14%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL- 129
VYKGK +AVK N +A + F E + + R+ + +G +L
Sbjct: 40 VYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLA 95
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 188
+V ++ +L HL H + + +A A ++Y +K + H DL + I
Sbjct: 96 IVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIF 152
Query: 189 FDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESV---MYSFG 239
+D ++ FGL K+ G L+ + PE +R P S +Y+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 240 TLLLDLLSGK-----HIPPSHALDLI----RDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
+L +L++G+ ++++ ++ + +C + + RL +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK---------RMKRLMA 263
Query: 291 RCLQYEPRERPNPRSLVTALVTLQKD 316
CL+ + ERP+ ++ + L ++
Sbjct: 264 ECLKKKRDERPSFPRILAEIEELARE 289
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 8e-21
Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 31/259 (11%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV K K + +A+K+ + + F+ E R + ++ + + L G C + LV
Sbjct: 23 VVCKAKWRAK-DVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77
Query: 132 AEYMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYC-TSKERALYH-DLNAYRIV 188
EY +L L E P A + L ++ + Y + + +AL H DL ++
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 189 FDDD-VNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
++ FG + D +++ TN + PE + + ++S+G +L
Sbjct: 138 LVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194
Query: 244 DLLSGK------HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
++++ + P + + + L + + + L +RC +P
Sbjct: 195 EVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---------PIESLMTRCWSKDP 245
Query: 298 RERPNPRSLVTALVTLQKD 316
+RP+ +V + L +
Sbjct: 246 SQRPSMEEIVKIMTHLMRY 264
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 3e-20
Identities = 53/266 (19%), Positives = 95/266 (35%), Gaps = 40/266 (15%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
VY+ +AVK D +EA+ L++ + L G C +
Sbjct: 22 KVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYH-DLNAY 185
LV E+ L + L + + + + A+ IA + Y + H DL +
Sbjct: 81 LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 186 RIVFDDDVNPRLSC--------FGLMKNSRD-GRSYSTNLAFTP----PEYLRTGRVTPE 232
I+ V FGL +R+ R+ + A PE +R +
Sbjct: 138 NILILQKVENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKG 194
Query: 233 SVMYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVR 287
S ++S+G LL +LL+G+ I + + + +C E +
Sbjct: 195 SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE---------PFAK 245
Query: 288 LASRCLQYEPRERPNPRSLVTALVTL 313
L C +P RP+ +++ L T+
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 5e-20
Identities = 55/266 (20%), Positives = 106/266 (39%), Gaps = 42/266 (15%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA-------RQFLEEARAVGQLRNRRLANLLGCCC 123
+V+KG+ ++++ +A+K ++F E + L + + L G
Sbjct: 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL 182
+V E++P L L + P+KW+++LR+ L IA +EY ++ + H DL
Sbjct: 94 NPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 183 NAYRIVFDDDVNPRLSC-----FGLMKNSRDGRSYSTNLAFTP----PEYL--RTGRVTP 231
+ I C FGL S+ + L PE + T
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTE 207
Query: 232 ESVMYSFGTLLLDLLSGK----HIPPSHA--LDLIRDRNIQ-TLTDSCLEGQFSSDEGTE 284
++ YSF +L +L+G+ +++IR+ ++ T+ + C
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP---------R 258
Query: 285 LVRLASRCLQYEPRERPNPRSLVTAL 310
L + C +P++RP+ +V L
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKEL 284
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 4e-19
Identities = 47/276 (17%), Positives = 89/276 (32%), Gaps = 39/276 (14%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
VY G+ + +A++ + + + F E A Q R+ + +G C
Sbjct: 48 QVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 188
++ TL + + ++A I + + Y +K + H DL + +
Sbjct: 106 IITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAK--GILHKDLKSKNVF 162
Query: 189 FDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTP-------PEYLRTGRVTPESVM---- 235
+D+ ++ FGL + L PE +R E
Sbjct: 163 YDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFS 221
Query: 236 -----YSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286
++ GT+ +L + + P + + L+ G E+
Sbjct: 222 KHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ--------IGMGKEIS 273
Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 322
+ C +E ERP L+ L L K SH
Sbjct: 274 DILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 2e-18
Identities = 58/343 (16%), Positives = 107/343 (31%), Gaps = 68/343 (19%)
Query: 43 EYSIETLRTATSGFAMENIVSE--HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
E + + ++ +G VYKG L+ + +AVK F+ + + + F
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDERP-VAVKVFS---FANRQNF 52
Query: 101 LEEAR--AVGQLRNRRLANLLGCCCEGD-----ERLLVAEYMPNDTLAKHLFHWETQPMK 153
+ E V + + +A + E LLV EY PN +L K+L
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSD 109
Query: 154 WAMRLRVALHIAEALEY-------CTSKERALYH-DLNAYRIVFDDDVNPRLSCFGL--- 202
W R+A + L Y + A+ H DLN+ ++ +D +S FGL
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 203 -----MKNSRDGRSYSTNLAFTP----PEYLR-------TGRVTPESVMYSFGTLLLDLL 246
+ + + + + T PE L + MY+ G + ++
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 247 SGK------HIPPSHAL----DLIRDRNIQTLTDS-CLEGQ-------FSSDEGT--ELV 286
P + + ++ + + E Q + + L
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289
Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPH 329
C + R + + L E V H
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTAHH 332
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 8e-18
Identities = 48/272 (17%), Positives = 91/272 (33%), Gaps = 38/272 (13%)
Query: 73 VYKGKLENQFR-IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
K + +K R R FL+E + + L + + +G + +
Sbjct: 26 AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
EY+ TL + W+ R+ A IA + Y S + H DLN++ +
Sbjct: 86 TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVR 142
Query: 191 DDVNPRLSCFGL--------------MKNSRDGRSYSTNLAFTP----PEYLRTGRVTPE 232
++ N ++ FGL + R + P PE + +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 233 SVMYSFGTLLLDLLSGKHIPP-----SHALDLIRDRNI-QTLTDSCLEGQFSSDEGTELV 286
++SFG +L +++ + P + L + + +C
Sbjct: 203 VDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP---------SFF 253
Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ RC +P +RP+ L L TL+
Sbjct: 254 PITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-17
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 24/260 (9%)
Query: 72 VVYKGKLENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
+ E+M L +L Q + + L +A I+ A+EY K H DL A +
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLV 144
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLD 244
++ +++ FGL + + A +T PE L + + +S +++FG LL +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 245 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
+ + P S +L+ + C E ++ L C Q+ P +
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSD 255
Query: 300 RPNPRSLVTALVTLQKDTEV 319
RP+ + A T+ +++ +
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 26/258 (10%)
Query: 73 VYKGKLENQ-FRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
V+ G+L +AVK + PD + FL+EAR + Q + + L+G C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
V E + L E ++ L++ A +EY SK H DL A +
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLV 246
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAF------TPPEYLRTGRVTPESVMYSFGTLLL 243
+ ++S FG+ + DG ++ T PE L GR + ES ++SFG LL
Sbjct: 247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 244 DLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
+ S P + + + C + + RL +C YEP
Sbjct: 307 ETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPD---------AVFRLMEQCWAYEPG 357
Query: 299 ERPNPRSLVTALVTLQKD 316
+RP+ ++ L +++K
Sbjct: 358 QRPSFSTIYQELQSIRKR 375
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 2e-17
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 73 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
E+M L +L Q + + L +A I+ A+EY K H +L A +
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVG 352
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
++ +++ FGL + + A +T PE L + + +S +++FG LL ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 246 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+ P S +L+ + C E ++ L C Q+ P +R
Sbjct: 413 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSDR 463
Query: 301 PNPRSLVTALVTLQKDTEV 319
P+ + A T+ +++ +
Sbjct: 464 PSFAEIHQAFETMFQESSI 482
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 83.3 bits (206), Expect = 3e-17
Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 24/257 (9%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ G R+A+K FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
EYM +L L + ++ + +A IA + Y H DL A I+ +
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 315
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++ +++ FGL + D + A +T PE GR T +S ++SFG LL +L
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 247 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
+ +P LD + C E L L +C + EP ERP
Sbjct: 376 TKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEERP 426
Query: 302 NPRSLVTALVTLQKDTE 318
L L TE
Sbjct: 427 TFEYLQAFLEDYFTSTE 443
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 3e-17
Identities = 64/255 (25%), Positives = 100/255 (39%), Gaps = 28/255 (10%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LV 131
V G ++AVK A A+ FL EA + QLR+ L LLG E L +V
Sbjct: 209 VMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
EYM +L +L + L+ +L + EA+EY H DL A ++
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVS 323
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDLL 246
+D ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 324 EDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380
Query: 247 S-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
S G+ IP + + D C + + C + RP
Sbjct: 381 SFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYDVMKNCWHLDAATRP 431
Query: 302 NPRSLVTALVTLQKD 316
L L ++
Sbjct: 432 TFLQLREQLEHIRTH 446
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 3e-17
Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 28/250 (11%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-L 130
V G ++AVK A A+ FL EA + QLR+ L LLG E L +
Sbjct: 36 DVMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
V EYM +L +L + L+ +L + EA+EY H DL A ++
Sbjct: 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLV 150
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDL 245
+D ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 151 SEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
Query: 246 LS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
S G+ IP + + D C + + C + R
Sbjct: 208 YSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMR 258
Query: 301 PNPRSLVTAL 310
P+ L L
Sbjct: 259 PSFLQLREQL 268
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 5e-17
Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 24/257 (9%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ G R+A+K FL+EA+ + +LR+ +L L E + +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
EYM +L L + ++ + +A IA + Y H DL A I+ +
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 398
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++ +++ FGL + D + A +T PE GR T +S ++SFG LL +L
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 247 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
+ +P LD + C E L L +C + EP ERP
Sbjct: 459 TKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEERP 509
Query: 302 NPRSLVTALVTLQKDTE 318
L L TE
Sbjct: 510 TFEYLQAFLEDYFTSTE 526
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 6e-17
Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 38/264 (14%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ ++AVK + FL EA + L++ +L L + + ++
Sbjct: 204 VWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
E+M +L L E + + IAE + + + H DL A I+
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 319
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
+ +++ FGL + D + A +T PE + G T +S ++SFG LL++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 247 SGKHIP-PSHALDLIRDRNIQTLT-----------DSCLEGQFSSDEGTELVRLASRCLQ 294
+ IP P + N + + ++C E EL + RC +
Sbjct: 380 TYGRIPYPGMS-------NPEVIRALERGYRMPRPENCPE---------ELYNIMMRCWK 423
Query: 295 YEPRERPNPRSLVTALVTLQKDTE 318
P ERP + + L TE
Sbjct: 424 NRPEERPTFEYIQSVLDDFYTATE 447
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 1e-16
Identities = 50/256 (19%), Positives = 109/256 (42%), Gaps = 24/256 (9%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV GK + Q+ +AVK + +F +EA+ + +L + +L G C + +V
Sbjct: 23 VVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
EY+ N L +L + ++ + L + + E + + S + H DL A + D
Sbjct: 82 TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVD 138
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
D+ ++S FG+ + D + S+ ++ PE + + +S +++FG L+ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 246 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
S +P S + + + + + ++ C P +R
Sbjct: 199 FSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD---------TIYQIMYSCWHELPEKR 249
Query: 301 PNPRSLVTALVTLQKD 316
P + L++++ L++
Sbjct: 250 PTFQQLLSSIEPLREK 265
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-16
Identities = 60/280 (21%), Positives = 107/280 (38%), Gaps = 37/280 (13%)
Query: 73 VYKGKL--------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
++KG ++ + +K +++ + F E A + +L ++ L G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
GDE +LV E++ +L +L + +L VA +A A+ + L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140
Query: 184 AYRI-VFDDDVNPR-------LSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TPESV 234
A I + ++ LS G+ + + PPE + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 235 MYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
+SFGT L ++ SG P L DR Q + + EL L
Sbjct: 201 KWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-----------HQLPAPKAAELANLI 249
Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPH 329
+ C+ YEP RP+ R+++ L +L VP H
Sbjct: 250 NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHHHHH 289
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 7e-16
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ G ++AVK + + FL EA + QL+++RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
EYM N +L L + L +A IAE + + + H DL A I+ D
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD 144
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++ +++ FGL + D + A +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 247 SGKHIP-PSHALDLIRDRNIQTLT-----------DSCLEGQFSSDEGTELVRLASRCLQ 294
+ IP P N + + D+C E EL +L C +
Sbjct: 205 THGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWK 248
Query: 295 YEPRERPNPRSLVTALVTLQKDTE 318
P +RP L + L TE
Sbjct: 249 ERPEDRPTFDYLRSVLEDFFTATE 272
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 54/259 (20%), Positives = 98/259 (37%), Gaps = 32/259 (12%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
+V+ G N+ ++A+K A F+EEA + +L + +L L G C E LV
Sbjct: 23 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
E+M + L+ +L + L + L + E + Y + H DL A +
Sbjct: 82 TEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC--VIHRDLAARNCL-- 136
Query: 191 DDVNPRLSC----FGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTL 241
V FG+ + D + S+ + PE R + +S ++SFG L
Sbjct: 137 --VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194
Query: 242 LLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
+ ++ S IP S ++ I + ++ + C +
Sbjct: 195 MWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST---------HVYQIMNHCWRER 245
Query: 297 PRERPNPRSLVTALVTLQK 315
P +RP L+ L + +
Sbjct: 246 PEDRPAFSRLLRQLAEIAE 264
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 3e-15
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV GK Q+ +A+K + +F+EEA+ + L + +L L G C + ++
Sbjct: 39 VVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
EYM N L +L + + L + + EA+EY SK+ H DL A + +
Sbjct: 98 TEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVN 154
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
D ++S FGL + D S+ + ++PPE L + + +S +++FG L+ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 246 LSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
S +P S + I E ++ + C + ER
Sbjct: 215 YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---------KVYTIMYSCWHEKADER 265
Query: 301 PNPRSLVTALVTL 313
P + L++ ++ +
Sbjct: 266 PTFKILLSNILDV 278
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 52/263 (19%), Positives = 97/263 (36%), Gaps = 29/263 (11%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
V++G +A+K R+ FL+EA + Q + + L+G +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENP 464
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
++ E L L + + A + A ++ AL Y SK H D+ A
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTL 241
++ + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 242 LLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 632
Query: 297 PRERPNPRSLVTALVTLQKDTEV 319
P RP L L T+ ++ ++
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKL 655
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 2e-14
Identities = 69/319 (21%), Positives = 117/319 (36%), Gaps = 52/319 (16%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
V G+L + + +A+K R+ FL EA +GQ + + L G +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY-H-DLNAY 185
++V EYM N +L L + Q + + IA ++Y + Y H DL A
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAAR 176
Query: 186 RIVFDDDVNPRLSC----FGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESV 234
I+ +N L C FGL + D + T PE + + T S
Sbjct: 177 NIL----INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 235 MYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
++S+G +L +++S P + + + C L +L
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA---------ALYQLM 283
Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLT 349
C Q + RP +V+ L L ++ + I AAA P + L D +D+T
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGS-----LKIITSAAARPSNLLLDQS-NVDIT 337
Query: 350 A---IHEILEKLG---YKD 362
+ L + K+
Sbjct: 338 TFRTTGDWLNGVWTAHCKE 356
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 59/266 (22%), Positives = 105/266 (39%), Gaps = 32/266 (12%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
VY G+ +N+ + A+K +R + FL E + L + + L+G +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 128 RLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
+ YM + L + + + P + + L +A +EY ++ H DL A
Sbjct: 97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQK--FVHRDLAAR 153
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--------TPPEYLRTGRVTPESVMYS 237
+ D+ +++ FGL ++ D YS T E L+T R T +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 238 FGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292
FG LL +LL+ G HI P + + C + L ++ +C
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---------SLYQVMQQC 264
Query: 293 LQYEPRERPNPRSLVTALVTLQKDTE 318
+ +P RP R LV + +
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALL 290
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 38/261 (14%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
VY G L + AVK NR FL E + + + +LLG C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
L+V YM + L + + P + + L +A+ ++Y SK+ H DL A
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASKK--FVHRDLAAR 157
Query: 186 RIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAF-----TPPEYLRTGRVTPESV 234
+ D+ +++ FGL +RD ++ A E L+T + T +S
Sbjct: 158 NCMLDEKFTVKVADFGL---ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 214
Query: 235 MYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
++SFG LL +L++ G + + + C + L +
Sbjct: 215 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 265
Query: 290 SRCLQYEPRERPNPRSLVTAL 310
+C + RP+ LV+ +
Sbjct: 266 LKCWHPKAEMRPSFSELVSRI 286
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 3e-14
Identities = 62/286 (21%), Positives = 108/286 (37%), Gaps = 39/286 (13%)
Query: 73 VYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
VYKG L + + +A+K R FL EA +GQ + + L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
+++ EYM N L K L + + + + + IA ++Y + H DL A
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANM--NYVHRDLAAR 176
Query: 186 RIVFDDDVNPRLSC----FGL---MKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESV 234
I+ VN L C FGL +++ + ++ T PE + + T S
Sbjct: 177 NIL----VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASD 232
Query: 235 MYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
++SFG ++ ++++ P + I D C + +L
Sbjct: 233 VWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS---------AIYQLM 283
Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP 335
+C Q E RP +V+ L L + + + P + LP
Sbjct: 284 MQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLP 329
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 4e-14
Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 29/263 (11%)
Query: 72 VVYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
V++G +A+K R+ FL+EA + Q + + L+G +
Sbjct: 30 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITEN 88
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
++ E L L + ++ + A ++ AL Y SK H D+ A
Sbjct: 89 PVWIIMELCTLGELRSFLQVRKYSLDLASL-ILYAYQLSTALAYLESKR--FVHRDIAAR 145
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGT 240
++ + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 205
Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
+ ++L P + + I + + +C L L ++C Y
Sbjct: 206 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAY 256
Query: 296 EPRERPNPRSLVTALVTLQKDTE 318
+P RP L L T+ ++ +
Sbjct: 257 DPSRRPRFTELKAQLSTILEEEK 279
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 4e-14
Identities = 53/280 (18%), Positives = 101/280 (36%), Gaps = 45/280 (16%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V + +L + ++AVK D +FL EA + + + +A L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 127 ER------LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
+ +++ +M + L + +R + IA +EY +S+
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN- 157
Query: 177 ALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
H DL A + +D+ ++ FGL SR Y E L
Sbjct: 158 -FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYRQGCASKLPVKWLALESLAD 213
Query: 227 GRVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
T S +++FG + ++++ G+ I + + + N C+E
Sbjct: 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECME------- 266
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 321
E+ L +C +P++RP+ L L + V S
Sbjct: 267 --EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 6e-14
Identities = 56/271 (20%), Positives = 107/271 (39%), Gaps = 38/271 (14%)
Query: 73 VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VY+G + R+A+K N +A R FL EA + + + LLG +G
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 126 DERLLVAEYMPNDTLAKHL--------FHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
L++ E M L +L + P + +++A IA+ + Y + +
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-- 158
Query: 178 LYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRTGRVT 230
H DL A + +D ++ FG+ ++ + Y PE L+ G T
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 231 PESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285
S ++SFG +L ++ + + + L + + + D+C + L
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 269
Query: 286 VRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
L C QY P+ RP+ +++++ +
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 9e-14
Identities = 55/269 (20%), Positives = 96/269 (35%), Gaps = 38/269 (14%)
Query: 72 VVYKGKL----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V G+L + +A+K R FL EA +GQ + + L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
++V EYM N +L L + Q + + + + Y + H DL A
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQF-TIMQLVGMLRGVGAGMRYLSDL--GYVHRDLAAR 180
Query: 186 RIVFDDDVNPRLSC----FGL---MKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESV 234
++ V+ L C FGL +++ D +T T PE + + S
Sbjct: 181 NVL----VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASD 236
Query: 235 MYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
++SFG ++ ++L+ P + + + C L +L
Sbjct: 237 VWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH---------ALHQLM 287
Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
C + +RP +V+ L L + E
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 1e-13
Identities = 59/278 (21%), Positives = 98/278 (35%), Gaps = 46/278 (16%)
Query: 73 VYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VY+G++ ++AVK FL EA + + ++ + +G +
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 126 DERLLVAEYMPNDTLAKHL---FHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYH 180
R ++ E M L L +QP AM L VA IA +Y H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 204
Query: 181 -DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
D+ A R P FG+ +RD Y PPE
Sbjct: 205 RDIAA-RNCLLTCPGPGRVAKIGDFGM---ARDIYRAGYYRKGGCAMLPVKWMPPEAFME 260
Query: 227 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
G T ++ +SFG LL ++ S G L+ + +C
Sbjct: 261 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG------- 313
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 314 --PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 1e-13
Identities = 54/279 (19%), Positives = 97/279 (34%), Gaps = 41/279 (14%)
Query: 72 VVYKGKLE-----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V + + +AVK+ S R F E + L++ + G C
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115
Query: 127 ER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
R L+ EY+P +L +L + + + L+ I + +EY +K H DL
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 172
Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
I+ +++ ++ FGL K + Y PE L + + S ++
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 232
Query: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RLA--- 289
SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRLPRPD 286
Query: 290 ----------SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ C +RP+ R L + ++
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 56/278 (20%), Positives = 96/278 (34%), Gaps = 46/278 (16%)
Query: 73 VYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VY+G++ ++AVK FL EA + + ++ + +G +
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 126 DERLLVAEYMPNDTLAKHL-----FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
R ++ E M L L + + L VA IA +Y H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 163
Query: 181 -DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
D+ A R P FG+ +RD SY PPE
Sbjct: 164 RDIAA-RNCLLTCPGPGRVAKIGDFGM---ARDIYRASYYRKGGCAMLPVKWMPPEAFME 219
Query: 227 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
G T ++ +SFG LL ++ S G L+ + +C
Sbjct: 220 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG------- 272
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 273 --PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 1e-13
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 379 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALN 438
M++ K+KG+ A + +++CY++ I + + ++ RS +Y Q+A
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYE 59
Query: 439 DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
D + + P W +AAAL L + EA+ E E
Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-13
Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 49/283 (17%)
Query: 72 VVYKGKLE-----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V + + +AVK+ S R F E + L++ + G C
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84
Query: 127 ER--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
R L+ EY+P D L KH + + L+ I + +EY +K H
Sbjct: 85 RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKR--YIH 137
Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPE 232
DL I+ +++ ++ FGL K + + PE L + +
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 233 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RL 288
S ++SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 198 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRL 251
Query: 289 A-------------SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ C +RP+ R L + ++ +
Sbjct: 252 PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 2e-13
Identities = 60/278 (21%), Positives = 96/278 (34%), Gaps = 43/278 (15%)
Query: 73 VYKGKLEN-----QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
V + +AVK A P R + +E + L + + GCC +
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 127 ER--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
LV EY+P D L +H L A I E + Y ++ H
Sbjct: 107 AASLQLVMEYVPLGSLRDYLPRHSIGLAQL-------LLFAQQICEGMAYLHAQH--YIH 157
Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPE 232
DL A ++ D+D ++ FGL K +G Y + PE L+ +
Sbjct: 158 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA 217
Query: 233 SVMYSFGTLLLDLLS--GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG-------- 282
S ++SFG L +LL+ P + +T L + G
Sbjct: 218 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL--ERGERLPRPDK 275
Query: 283 --TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
E+ L C + E RP +L+ L T+ + +
Sbjct: 276 CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 3e-13
Identities = 53/276 (19%), Positives = 100/276 (36%), Gaps = 44/276 (15%)
Query: 73 VYKGKL----ENQFRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V +G L ++AVK + + S+ + +FL EA + + + LLG C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 127 -----ERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
+ +++ +M L + + L+ + IA +EY +++
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-- 167
Query: 178 LYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLAF----TPPEYLRTG 227
H DL A + DD+ ++ FGL S+ Y E L
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGL---SKKIYSGDYYRQGRIAKMPVKWIAIESLADR 224
Query: 228 RVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282
T +S +++FG + ++ + G + D + + + CL+
Sbjct: 225 VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD-------- 276
Query: 283 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
EL + C + +P +RP L L L +
Sbjct: 277 -ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 3e-13
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K +G+ A K++ +I+ YTQ + + +P + R+ +Y S ++A DA A V
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
+ P + A A F + A+ A + E
Sbjct: 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 71.1 bits (174), Expect = 3e-13
Identities = 51/264 (19%), Positives = 94/264 (35%), Gaps = 30/264 (11%)
Query: 72 VVYKGKLEN---QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
V +G Q +A+K + + + EA+ + QL N + L+G C+ +
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 409
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
+LV E L K L + + + + ++ ++Y K H +L A
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARN 466
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFG 239
++ + ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 240 TLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294
+ + LS P + I C EL L S C
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 577
Query: 295 YEPRERPNPRSLVTALVTLQKDTE 318
Y+ +RP+ ++ +
Sbjct: 578 YKWEDRPDFLTVEQRMRACYYSLA 601
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 5e-13
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 38/261 (14%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
VY G L + AVK NR FL E + + + +LLG C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
L+V YM + L + + P + + L +A+ +++ SK+ H DL A
Sbjct: 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASKK--FVHRDLAAR 221
Query: 186 RIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAF-----TPPEYLRTGRVTPESV 234
+ D+ +++ FGL +RD ++ A E L+T + T +S
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 235 MYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
++SFG LL +L++ G + + + C + L +
Sbjct: 279 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 329
Query: 290 SRCLQYEPRERPNPRSLVTAL 310
+C + RP+ LV+ +
Sbjct: 330 LKCWHPKAEMRPSFSELVSRI 350
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 7e-13
Identities = 65/290 (22%), Positives = 103/290 (35%), Gaps = 56/290 (19%)
Query: 73 VYKGKLENQF------RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V+ + N +AVK ++ + F EA + L+++ + G C EG
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116
Query: 127 ERLLVAEYMPNDTLAKHL-------------FHWETQPMKWAMRLRVALHIAEALEYCTS 173
L+V EYM + L + L P+ L VA +A + Y
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176
Query: 174 KERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----T 219
H DL R V L FG+ SRD Y
Sbjct: 177 LH--FVHRDLAT-RNCL---VGQGLVVKIGDFGM---SRDIYSTDYYRVGGRTMLPIRWM 227
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLE 274
PPE + + T ES ++SFG +L ++ + GK + + A+D I +C
Sbjct: 228 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP 287
Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVL 324
E+ + C Q EP++R + + + L L + V VL
Sbjct: 288 ---------EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 328
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 1e-12
Identities = 58/281 (20%), Positives = 100/281 (35%), Gaps = 51/281 (18%)
Query: 73 VYKGKLEN------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V+ + N + +AVK + F EA + L++ + G C +GD
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 127 ERLLVAEYMPN--------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
++V EYM + L + + L +A IA + Y
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA 150
Query: 173 SKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSYS--TNLAF----TPP 221
S+ H DL R V L FG+ ++ Y + PP
Sbjct: 151 SQH--FVHRDLAT-RNCL---VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 204
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 276
E + + T ES ++SFG +L ++ + GK + + ++ I + C +
Sbjct: 205 ESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK-- 262
Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317
E+ + C Q EP++R N + + L L K T
Sbjct: 263 -------EVYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 1e-12
Identities = 50/265 (18%), Positives = 96/265 (36%), Gaps = 31/265 (11%)
Query: 72 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG + + +A+K + P A + L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
L+ + MP L ++ + L + IA+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRTGRVTPESVMYSF 238
++ + +++ FGL K + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G + +L++ G IP S ++ C ++ + +C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI---------DVYMIMRKCW 256
Query: 294 QYEPRERPNPRSLVTALVTLQKDTE 318
+ RP R L+ + +D +
Sbjct: 257 MIDADSRPKFRELIIEFSKMARDPQ 281
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 1e-12
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K KG+ F+ D+ +++ YT+ I ++ R+ Y Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQ 78
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
+ P + +AAAL A+ +A ++A L+
Sbjct: 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 2e-12
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K++G+ F + + + CY + I + + R+L YL P++AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 488
+ A + + +EA A L+ A L ++ N
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNF 109
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 29/263 (11%)
Query: 72 VVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
VY+G N + +AVK + D ++ F+ EA + L + + L+G E +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
++ E P L +L + + + +L I +A+ Y S H D+
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGT 240
I+ +L FGL + D Y ++ + PE + R T S ++ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
+ ++LS P + ++ + D C L L +RC Y
Sbjct: 203 CMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPP---------VLYTLMTRCWDY 253
Query: 296 EPRERPNPRSLVTALVTLQKDTE 318
+P +RP LV +L + + +
Sbjct: 254 DPSDRPRFTELVCSLSDVYQMEK 276
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 5e-12
Identities = 54/264 (20%), Positives = 98/264 (37%), Gaps = 32/264 (12%)
Query: 72 VVYKGKLENQFR---IAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V KG + + +AVK + + + L EA + QL N + ++G CE +
Sbjct: 32 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEAE 90
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
+LV E L K+L + + +K + + ++ ++Y H DL A
Sbjct: 91 SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAAR 146
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMYSF 238
++ ++S FGL K R +Y T+ + PE + + + +S ++SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206
Query: 239 GTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G L+ + S P S ++ C E+ L + C
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCW 257
Query: 294 QYEPRERPNPRSLVTALVTLQKDT 317
Y+ RP ++ L D
Sbjct: 258 TYDVENRPGFAAVELRLRNYYYDV 281
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 5e-12
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K + + F+ KD+ +I+ Y+Q I++ + + RSL+YL ++ AL DA++A
Sbjct: 17 KTQANDYFKAKDYENAIKFYSQAIEL-NPSNAIYYGNRSLAYLRTECYGYALGDATRAIE 75
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
+ + Y +AA+ ALGK A ++
Sbjct: 76 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 6e-12
Identities = 50/265 (18%), Positives = 97/265 (36%), Gaps = 31/265 (11%)
Query: 72 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG + + +A+K + P A + L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
L+ + MP L ++ + L + IA+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 238
++ + +++ FGL K + + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G + +L++ G IP S ++ C ++ + +C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI---------DVYMIMVKCW 256
Query: 294 QYEPRERPNPRSLVTALVTLQKDTE 318
+ RP R L+ + +D +
Sbjct: 257 MIDADSRPKFRELIIEFSKMARDPQ 281
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 7e-12
Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K KG+ F+ D+ ++ Y + + + ++ R+ Q AL+D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIR 75
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
+ + +AA L A+ + ++AQ A +A ++
Sbjct: 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 8e-12
Identities = 52/292 (17%), Positives = 99/292 (33%), Gaps = 54/292 (18%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGDER- 128
V+ GK + ++AVK F + + E + Q R N+L +G
Sbjct: 53 VWMGKWRGE-KVAVKVFF---TTEEASWFRE-TEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 129 ---LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
L+ +Y N +L +L ++ + L++A L + T + A+
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
H DL + I+ + ++ GL + ++ + T PE L +
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLN 223
Query: 231 PESV-------MYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNIQTLTDSCLEG 275
MYSFG +L ++ P H L C++
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283
Query: 276 Q-------FSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
+SSDE ++ +L + C + P R + L + + ++
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 8e-12
Identities = 48/298 (16%), Positives = 103/298 (34%), Gaps = 35/298 (11%)
Query: 72 VVYKGKLENQFR-----IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
V+KG + + +K + + Q + A+G L + + LLG C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
LV +Y+P +L H+ + + L + IA+ + Y + H +L A
Sbjct: 87 SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 238
++ +++ FG+ + + E + G+ T +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G + +L++ G + + DL+ C ++ + +C
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTI---------DVYMVMVKCW 254
Query: 294 QYEPRERPNPRSLVTALVTLQKD----TEVPSHVLMGIPHGAAALPLSPLGDACLRMD 347
+ RP + L + +D + GI G L+ + ++
Sbjct: 255 MIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEVELE 312
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 9e-12
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K++G+ F + + + CY + I + + R+L YL P++AL D +A
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 71
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
+ A + + +EA A L+ A L
Sbjct: 72 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 107
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 9e-12
Identities = 50/268 (18%), Positives = 92/268 (34%), Gaps = 38/268 (14%)
Query: 72 VVYKGKL---ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
V +G + Q +A+K + + + EA+ + QL N + L+G C+ +
Sbjct: 25 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 83
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
+LV E L K L + + + + ++ ++Y K H DL A
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARN 140
Query: 187 IVFDDDVNPRLSC----FGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVM 235
++ + R FGL K SY + + PE + + + S +
Sbjct: 141 VL----LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 196
Query: 236 YSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
+S+G + + LS P + I C EL L S
Sbjct: 197 WSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMS 247
Query: 291 RCLQYEPRERPNPRSLVTALVTLQKDTE 318
C Y+ +RP+ ++ +
Sbjct: 248 DCWIYKWEDRPDFLTVEQRMRACYYSLA 275
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 2e-11
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLMSDMPQEALNDASQ 442
K +G+ + ++F A++ Y + I++ +P F R+ +Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIEL----NPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 443 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
A I P + A AL +L K EA A ++A L+
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELD 110
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 2e-11
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 377 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEA 436
G ++ K + + F+ KD+ +I+ Y+Q I++ + + RSL+YL ++ A
Sbjct: 1 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYA 59
Query: 437 LNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483
L DA++A + + Y +AA+ ALGK A ++
Sbjct: 60 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPH 106
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 57/278 (20%), Positives = 104/278 (37%), Gaps = 45/278 (16%)
Query: 73 VYKGKLENQF---RIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDE 127
V K +++ A+KR A D + F E + +L + + NLLG C
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 128 RLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTS 173
L EY P+ L L + + L A +A ++Y +
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 174 KERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRT 226
K+ H DL A I+ ++ +++ FGL SR Y T E L
Sbjct: 161 KQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215
Query: 227 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
T S ++S+G LL +++S G + + + + +C +
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD------- 268
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
E+ L +C + +P ERP+ ++ +L + ++ +
Sbjct: 269 --EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 4e-11
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDV--GTMVSPTAFARRSLSYLMSDMPQEALNDASQA 443
+K+G+ F+ D+ ++ YTQ + + R+ +L + +A +AS+A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 444 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
A Y ++ AL LG+ ++A L+ LE
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 5e-11
Identities = 50/275 (18%), Positives = 101/275 (36%), Gaps = 45/275 (16%)
Query: 73 VYKGKLE-----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
V + + ++AVK + + +E + L + + G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 127 ER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
L+ E++P+ +L ++L + + + +L+ A+ I + ++Y S++ H DL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQ--YVHRDLA 153
Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
A ++ + + ++ FGL K + Y + PE L + S ++
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 237 SFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RLAS- 290
SFG L +LL+ AL L GQ + + RL
Sbjct: 214 SFGVTLHELLTYCDSDSSPMALFLKMIGPTH--------GQMTVTRLVNTLKEGKRLPCP 265
Query: 291 ------------RCLQYEPRERPNPRSLVTALVTL 313
+C +++P R + ++L+ L
Sbjct: 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 6e-11
Identities = 54/275 (19%), Positives = 98/275 (35%), Gaps = 52/275 (18%)
Query: 73 VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG L +A+K A R+ F EA +L++ + LLG +
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84
Query: 126 DERLLVAEYMPN--------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 171
++ Y + D + ++ + + IA +EY
Sbjct: 85 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 144
Query: 172 TSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSYSTNLA------FTP 220
+S + H DL A R V V +L+ GL + Y +
Sbjct: 145 SSHH--VVHKDL-ATRNVL---VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMA 198
Query: 221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHA----LDLIRDRNIQTLTDSCLEG 275
PE + G+ + +S ++S+G +L ++ S P ++ +++IR+R + D C
Sbjct: 199 PEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPA- 257
Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
+ L C P RP + + + L
Sbjct: 258 --------WVYALMIECWNEFPSRRPRFKDIHSRL 284
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 9e-11
Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 47/282 (16%)
Query: 73 VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCC 122
V + ++AVK A + E + + + + NLLG C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
+ ++ EY L ++L H + + + A +A +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPP 221
EY SK+ H DL A ++ +D +++ FGL ++ Y +TN P
Sbjct: 205 EYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 276
E L T +S ++SFG LL ++ + G +P L+++ + +C
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN-- 320
Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
EL + C P +RP + LV L + T
Sbjct: 321 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 9e-11
Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 47/292 (16%)
Query: 73 VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCC 122
V + + +AVK A + E + + +++ + NLLG C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
+ ++ EY L ++L + M + + +A +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPP 221
EY S++ H DL A ++ ++ +++ FGL ++ + Y +TN P
Sbjct: 171 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 276
E L T +S ++SFG L+ ++ + G IP L+++ + +C
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 286
Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIP 328
EL + C P +RP + LV L + T ++ + P
Sbjct: 287 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 1e-10
Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
+ +G F D+ +++ YT+ I ++ R+ + EA+ D ++A
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIE 66
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
P + A +A A A+ + A L A +
Sbjct: 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 102
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 1e-10
Identities = 47/292 (16%), Positives = 99/292 (33%), Gaps = 54/292 (18%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGD--- 126
V++GK + +AVK F+ + R + E + Q R N+L + +
Sbjct: 58 VWRGKWRGE-EVAVKIFS---SREERSWFRE-AEIYQTVMLRHENILGFIAADNKDNGTW 112
Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
+ LV++Y + +L +L + +++AL A L + T + A+
Sbjct: 113 TQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 169
Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
H DL + I+ + ++ GL + + T PE L +
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSIN 228
Query: 231 PESV-------MYSFGTLLLDLLSGKHI---PPSHAL---DLI-RDRNIQTLTDS-CLEG 275
+ +Y+ G + ++ I + L DL+ D +++ + C +
Sbjct: 229 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 288
Query: 276 Q--------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
S + + ++ C R + L L + +
Sbjct: 289 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 67/296 (22%), Positives = 105/296 (35%), Gaps = 60/296 (20%)
Query: 73 VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
V++ + +AVK A D + F EA + + N + LLG C G
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122
Query: 126 DERLLVAEYMPNDTLAKHL----------------------FHWETQPMKWAMRLRVALH 163
L+ EYM L + L P+ A +L +A
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182
Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSY--STNL 216
+A + Y + ++ H DL A R V + FGL +N Y N
Sbjct: 183 VAAGMAYLSERK--FVHRDL-ATRNCL---VGENMVVKIADFGLSRNIYSADYYKADGND 236
Query: 217 AF----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQT 267
A PPE + R T ES ++++G +L ++ S G + + +RD NI
Sbjct: 237 AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA 296
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHV 323
++C EL L C P +RP+ S+ L + + E V
Sbjct: 297 CPENCPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTVGV 343
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 55/274 (20%), Positives = 101/274 (36%), Gaps = 34/274 (12%)
Query: 73 VYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
V + +AVK+ S R F E + + L + + G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98
Query: 128 R--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
+ LV EY+P+ D L +H + + L + I + +EY S+ R ++ D
Sbjct: 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQICKGMEYLGSR-RCVHRD 152
Query: 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESV 234
L A I+ + + + +++ FGL K + Y PE L + +S
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 212
Query: 235 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG----------TE 284
++SFG +L +L + S + + +R + + +EG E
Sbjct: 213 VWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAE 272
Query: 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ L C P++RP+ +L L L +
Sbjct: 273 VHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 58/281 (20%), Positives = 97/281 (34%), Gaps = 61/281 (21%)
Query: 73 VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCC 122
V + + +AVK A + E + + +++ + NLLG C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
+ ++ EY L ++L + M + + +A +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF 218
EY S++ H DL A R V V FGL +RD Y +TN
Sbjct: 217 EYLASQK--CIHRDL-AARNVL---VTENNVMKIADFGL---ARDINNIDYYKKTTNGRL 267
Query: 219 ----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLT 269
PE L T +S ++SFG L+ ++ + G IP L+++ +
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 327
Query: 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
+C EL + C P +RP + LV L
Sbjct: 328 ANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDL 359
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 7e-10
Identities = 14/99 (14%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 379 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALN 438
M + K++G+ F+ +R ++ CY Q I +P ++ ++++ + +A+
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQ 59
Query: 439 DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 477
Q + +++ + L A +++
Sbjct: 60 MCQQGLRYTSTA-EHVAIRSKLQYRLELAQGAVGSVQIP 97
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 8e-10
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 38/199 (19%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGD--- 126
V++G + + +AVK F+ D + + E + R N+L
Sbjct: 24 VWRGSWQGE-NVAVKIFS---SRDEKSWFRE-TELYNTVMLRHENILGFIASDMTSRHSS 78
Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
+ L+ Y +L +L + + LR+ L IA L + T + A+
Sbjct: 79 TQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135
Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
H DL + I+ + ++ GL +++ + T PE L +
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQ 194
Query: 231 PESV-------MYSFGTLL 242
+ +++FG +L
Sbjct: 195 VDCFDSYKRVDIWAFGLVL 213
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 1e-09
Identities = 57/261 (21%), Positives = 97/261 (37%), Gaps = 36/261 (13%)
Query: 72 VVYKGKL----ENQFRIAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCE 124
VV +G+ +AVK + + + P+A F+ E A+ L +R L L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
+V E P +L L R A+ +AE + Y SK H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148
Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
A ++ ++ FGLM+ + + PE L+T + S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 237 SFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLT--DSCLEGQFSSDEGTELVRLA 289
FG L ++ + P S L I D+ + L + C + ++ +
Sbjct: 209 MFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQ---------DIYNVM 258
Query: 290 SRCLQYEPRERPNPRSLVTAL 310
+C ++P +RP +L L
Sbjct: 259 VQCWAHKPEDRPTFVALRDFL 279
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 1e-09
Identities = 62/282 (21%), Positives = 104/282 (36%), Gaps = 58/282 (20%)
Query: 73 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
V K +AVK +A P + L E + Q+ + + L G C +
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 126 DERLLVAEYMPNDTLAKHL----------------------FHWETQPMKWAMRLRVALH 163
LL+ EY +L L H + + + + A
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLA 217
I++ ++Y + L H DL A I+ + ++S FGL SRD +
Sbjct: 159 ISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGL---SRDVYEEDSYVKRSQGR 213
Query: 218 F----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTL 268
E L T +S ++SFG LL ++++ G + IPP +L++ +
Sbjct: 214 IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
D+C E E+ RL +C + EP +RP + L
Sbjct: 274 PDNCSE---------EMYRLMLQCWKQEPDKRPVFADISKDL 306
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 1e-09
Identities = 52/285 (18%), Positives = 92/285 (32%), Gaps = 58/285 (20%)
Query: 73 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCCE 124
V + + ++AVK +A D ++ + E + + L + NLLG C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121
Query: 125 GDERLLVAEYMPN------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
G L++ EY F L + +A+ + +
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181
Query: 173 SKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF---- 218
SK H D+ A R V + FGL +RD S N
Sbjct: 182 SKN--CIHRDVAA-RNVL---LTNGHVAKIGDFGL---ARDIMNDSNYIVKGNARLPVKW 232
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNIQTLTDSC 272
PE + T +S ++S+G LL ++ S P ++ L++D
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA 292
Query: 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317
+ + + C EP RP + + + L ++
Sbjct: 293 PK---------NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFA--RRSLSYLMSDMPQEALNDASQA 443
K KG+ FR+K + +I+ Y +++ S Y+ ++ + +++A
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALEL----KEDPVFYSNLSACYVSVGDLKKVVEMSTKA 65
Query: 444 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 488
+ P + +A+A LGK +A L S+ + A+
Sbjct: 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASI 110
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 9e-05
Identities = 10/102 (9%), Positives = 31/102 (30%), Gaps = 2/102 (1%)
Query: 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 446
+ D + + + + + + + + R + +A D +A+ +
Sbjct: 275 YMALIMADRNDSTEYYNYFDKALKLDSN-NSSVYYHRGQMNFILQNYDQAGKDFDKAKEL 333
Query: 447 SPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 488
P A + K ++ + EA + ++
Sbjct: 334 DPENIFPYIQLACLAYRENKFDDCETLFSEA-KRKFPEAPEV 374
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 57.8 bits (139), Expect = 3e-09
Identities = 39/280 (13%), Positives = 68/280 (24%), Gaps = 49/280 (17%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNR---RLANLLGCCCE 124
VV+ + +E A+K F A + + E A +L +
Sbjct: 77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136
Query: 125 GD-----------------------ERLLVAEYMPND--TLAKHLFHWETQ--PMKWAMR 157
D LL+ D L L
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 158 LRVALHIAEALEYCTSKERALYH-DL---NAYRIVFDDDVNPRLSCFGL-MKNSRDGRSY 212
+ + SK L H N + D L K G +
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251
Query: 213 STNLAFTPPEYL--RTGRVTPESVMYSFGTLLLDLLSGK---HIPPSHALDLIRDRNIQT 267
S + + P E+L T T + G + + + + +++
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV 311
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307
L + + L R L ++ R R P +
Sbjct: 312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 4e-09
Identities = 56/290 (19%), Positives = 95/290 (32%), Gaps = 62/290 (21%)
Query: 73 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCCE 124
V + + +AVK SA R+ + E + + L N + NLLG C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 125 GDERLLVAEYMPNDTLAKHL----------------FHWETQPMKWAMRLRVALHIAEAL 168
G L++ EY L L + + L + +A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF 218
+ SK H DL A R + + FGL +RD S N
Sbjct: 159 AFLASKN--CIHRDLAA-RNIL---LTHGRITKICDFGL---ARDIKNDSNYVVKGNARL 209
Query: 219 ----TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNIQTL 268
PE + T ES ++S+G L +L S P P + +I++
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 269
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ E+ + C +P +RP + +V + ++
Sbjct: 270 PEHAPA---------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 5e-09
Identities = 44/249 (17%), Positives = 87/249 (34%), Gaps = 25/249 (10%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCC---CEGD 126
VYKG E +A + ++F EEA + L++ + +G
Sbjct: 42 VYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101
Query: 127 ERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
+ + LV E M + TL +L + MK + I + L++ ++ + H DL
Sbjct: 102 KCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159
Query: 185 YRIVFD-DDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGTL 241
I + ++ GL R + + F PE +Y+FG
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMC 218
Query: 242 LLDLLSGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
+L++ + ++ + + +T F E+ + C++
Sbjct: 219 MLEMATSEYPYSECQNAAQIYRR-------VTSGVKPASFDKVAIPEVKEIIEGCIRQNK 271
Query: 298 RERPNPRSL 306
ER + + L
Sbjct: 272 DERYSIKDL 280
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 378 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEAL 437
+ E + + AF D+ A+I + ++V R+ ++ P++A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 438 NDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 477
+D A + A Y + + LG + + +RE
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVREC 237
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 7/106 (6%)
Query: 377 GQMQETLNS----KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM 432
+++ + G ++ + +D + A+ RR+ +L
Sbjct: 17 NLYFQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGK 75
Query: 433 PQEALNDASQAQVISPVWHMAAYLQAA-ALFALGKENEAQAALREA 477
+ AL D ++ + AA LQ L GK +EA+ ++
Sbjct: 76 SKAALPDLTKVIQLKM-DFTAARLQRGHLLLKQGKLDEAEDDFKKV 120
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 4/115 (3%)
Query: 377 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMP 433
Q+++ + + R + + Y + + + R + + P
Sbjct: 252 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKP 311
Query: 434 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 488
EA+ S+ + P A +A A +EA A N+
Sbjct: 312 VEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETA-QEHNENDQQI 365
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 48/282 (17%), Positives = 93/282 (32%), Gaps = 47/282 (16%)
Query: 73 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCE 124
V + +AVK A + + E + + + + + NLLG C +
Sbjct: 43 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102
Query: 125 GDE-RLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALE 169
+++ E+ L+ +L + + + +A+ +E
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 170 YCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPE 222
+ S++ H DL A I+ + ++ FGL ++ Y + PE
Sbjct: 163 FLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQ 276
+ T +S ++SFG LL ++ S P +++ D
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-- 278
Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
E+ + C EP +RP LV L L +
Sbjct: 279 -------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 2e-08
Identities = 46/260 (17%), Positives = 85/260 (32%), Gaps = 53/260 (20%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG--------CCC 123
+VY+G +N+ +AVKR + A + E + L C
Sbjct: 40 IVYRGMFDNR-DVAVKRILPECFSFADR---EVQL--------LRESDEHPNVIRYFCTE 87
Query: 124 EGDERL-LVAEYMP----NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
+ + + E K H +P+ ++ L + S +
Sbjct: 88 KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT-LLQ-----QTTSGLAHLHSLN--I 139
Query: 179 YH-DLNAYRIVF-----DDDVNPRLSCFGLMKNSRDGRSYSTNLAF---TP----PEYLR 225
H DL + I+ + +S FGL K GR + + T PE L
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS 199
Query: 226 ---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG-QFSSDE 281
T ++S G + ++S P +L + + + CL +
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVI 259
Query: 282 GTELVRLASRCLQYEPRERP 301
EL+ + + +P++RP
Sbjct: 260 ARELIE---KMIAMDPQKRP 276
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 3e-08
Identities = 31/198 (15%), Positives = 56/198 (28%), Gaps = 36/198 (18%)
Query: 127 ERLLVAEYMPND--TLAKHLFHWETQ--PMKWAMRLRVALHIAEALEYCTSKERALYH-D 181
R + M ++ T + L + + RL++ L + L L H
Sbjct: 174 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTY 231
Query: 182 L---NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYL-----------RTG 227
L + IV D L+ F + S + F PPE R
Sbjct: 232 LRPVD---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRT 288
Query: 228 RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDEGTELV 286
+T ++ G ++ + P I ++ + L+
Sbjct: 289 LMTFSFDAWALGLVIYWIWCAD--LP------ITKDAALGGSEWIFRSCKNIPQPVRALL 340
Query: 287 RLASRCLQYEPRERPNPR 304
L+Y +R P
Sbjct: 341 E---GFLRYPKEDRLLPL 355
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 53.5 bits (128), Expect = 7e-08
Identities = 34/225 (15%), Positives = 59/225 (26%), Gaps = 35/225 (15%)
Query: 129 LLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL--- 182
L T + L + + RL++ L + L L H L
Sbjct: 183 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPV 240
Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYL----------RTGRVTPE 232
+ IV D L+ F + F PPE +T
Sbjct: 241 D---IVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297
Query: 233 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLAS 290
++ G + + P+ + E F S + + L
Sbjct: 298 FDTWTLGLAIYWIWCAD--LPNTDDAALGG----------SEWIFRSCKNIPQPVRALLE 345
Query: 291 RCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP 335
L+Y +R P + Q TE+ + + + G
Sbjct: 346 GFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQTDGEPTRE 390
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-07
Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 8/108 (7%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K+ G+ A++ KDF +++ Y + ++ + T ++ Y + +A
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66
Query: 446 ISPVWHMA------AYLQ-AAALFALGKENEAQAALREASILENKKSA 486
+ AY + + F K +A ++
Sbjct: 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDV 114
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 378 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEAL 437
+ E + + AF D+ A+I + ++V R+ ++ P++A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 438 NDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 477
+D A + A Y + + LG + + +RE
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVREC 214
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 9/96 (9%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLMSDMPQEALNDASQ 442
+ G ++ + +D P A+ RR+ +L + AL D ++
Sbjct: 7 LELGKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTK 62
Query: 443 AQVISPVWHMAAYLQ-AAALFALGKENEAQAALREA 477
+ AA LQ L GK +EA+ ++
Sbjct: 63 VIALKMD-FTAARLQRGHLLLKQGKLDEAEDDFKKV 97
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 4/115 (3%)
Query: 377 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMP 433
Q+++ + + R + + Y + + + R + + P
Sbjct: 229 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKP 288
Query: 434 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 488
EA+ S+ + P A +A A +EA A N+
Sbjct: 289 VEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAA-QEHNENDQQI 342
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 10/115 (8%), Positives = 30/115 (26%), Gaps = 15/115 (13%)
Query: 388 KGDVAFRHKDFRASIECYTQFI--------------DVGTMVSPTAFARRSLSYLMSDMP 433
+G + + + + + + + + ++L
Sbjct: 77 RGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADY 136
Query: 434 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 488
A+ + + L+A G+ +A + L+ A + A
Sbjct: 137 TAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAA-SKLKSDNTEA 190
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 60/295 (20%), Positives = 97/295 (32%), Gaps = 67/295 (22%)
Query: 73 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCE 124
V ++AVK A R+ + E + + QL + + NLLG C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 125 GDERLLVAEYMPN---------------------DTLAKHLFHWETQPMKWAMRLRVALH 163
L+ EY + + + + + L A
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---S 213
+A+ +E+ K H DL A R V V FGL +RD S
Sbjct: 181 VAKGMEFLEFKS--CVHRDLAA-RNVL---VTHGKVVKICDFGL---ARDIMSDSNYVVR 231
Query: 214 TNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDR 263
N PE L G T +S ++S+G LL ++ S P ++ LI++
Sbjct: 232 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG 291
Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
E E+ + C ++ R+RP+ +L + L D E
Sbjct: 292 FKMDQPFYATE---------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 3e-07
Identities = 55/353 (15%), Positives = 106/353 (30%), Gaps = 101/353 (28%)
Query: 15 SEYGEAAPEAQDVENEEKPGVDNVPVFCEYSI------ETLRTATSGFAMENIVSEHGEK 68
+E + + + + ++ VF +Y++ LR A V G
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL 159
Query: 69 -------APNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 121
A +V K++ + + F W + L
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKI--F----WLN----------------------LKN 191
Query: 122 CCEGDERL-----LVAEYMPNDT-LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
C + L L+ + PN T + H + + + LR + ++ Y E
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR---RLLKSKPY----E 244
Query: 176 RALYHDLNAYRIVFDDDV-NPR------LSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGR 228
L +V + V N + LSC L+ +R + + L+ T
Sbjct: 245 NCL--------LVLLN-VQNAKAWNAFNLSCKILL-TTRF-KQVTDFLSAA-----TTTH 288
Query: 229 VTPESVMYSFG-----TLLLDLLSGK--HIPPS----H--ALDLI--RDRNIQTLTDSCL 273
++ + + +LLL L + +P + L +I R+ D
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD--- 345
Query: 274 EGQFSSDEGTELVRLASRCLQY-EPRERPNPRSLVTALVTLQKDTEVPSHVLM 325
+ +L + L EP E R + L +P+ +L
Sbjct: 346 --NWKHVNCDKLTTIIESSLNVLEPAEY---RKMFDRLSVFPPSAHIPTILLS 393
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-07
Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K G+ A++ KDF + Y + I++ + T + ++ Y E + +A
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVE 70
Query: 446 ISPVWHMA------AYL-QAAALFALGKENEAQAALREASILEN 482
+ A A + A +
Sbjct: 71 VGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFR 114
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 6e-07
Identities = 44/244 (18%), Positives = 87/244 (35%), Gaps = 19/244 (7%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
K E+ + +K N S + E + +++ + E
Sbjct: 40 AILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
+V +Y L K + + + L + I AL++ + + L+ D+ + I
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFL 158
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
D +L FG+ + + TP PE +S +++ G +L +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPN 302
+ K A +++ L + G F S +L L S+ + PR+RP+
Sbjct: 219 CTLK--HAFEA------GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270
Query: 303 PRSL 306
S+
Sbjct: 271 VNSI 274
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 7e-07
Identities = 53/285 (18%), Positives = 92/285 (32%), Gaps = 82/285 (28%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL--LGCCCEGDERL 129
VV++G + + +AVKR A E + + + + N+ C D L
Sbjct: 31 VVFQGSFQGR-PVAVKRMLIDFCDIALM---EIKLLTESDDH--PNVIRYYCSETTDRFL 84
Query: 130 -LVAEYMPNDTL-----AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183
+ E N L +K++ + K + + IA + + H L
Sbjct: 85 YIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL--------HSLK 135
Query: 184 --------------------AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP--- 220
A + +++ +S FGL K G+S P
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195
Query: 221 -----PEYLR-------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
PE L R+T ++S G + +LS P R+ NI
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNI--- 250
Query: 269 TDSCLEGQFS------------SDEGTELVRLASRCLQYEPRERP 301
+ G FS E T+L+ + + ++P +RP
Sbjct: 251 ----IRGIFSLDEMKCLHDRSLIAEATDLIS---QMIDHDPLKRP 288
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 8e-07
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K +G+ F K+F +I+ Y I++ P ++ S Y+ + ++ + ++A
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 488
I P A +A+A +LG +A L S+ + A+
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFDGASI 130
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 27/265 (10%), Positives = 62/265 (23%), Gaps = 45/265 (16%)
Query: 72 VVYKGK------LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 125
VY+ +N+ + +K + + + +
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139
Query: 126 DERLLVAEYMPNDTLAKHL-----FHWETQPMKWAMRLRVALHIAEALEYCTSKERA--- 177
+ +LV E TL + + P + A+ + +E E
Sbjct: 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISF--AMRMLYMIEQVHDCEIIHGD 197
Query: 178 -------LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEY--- 223
L + D L G S D + + FT +
Sbjct: 198 IKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQCV 254
Query: 224 -LRTGRVTPESV-MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
+ + + + + + +L G ++ +++ + + D
Sbjct: 255 EMLSNKPWNYQIDYFGVAATVYCMLFGTYMK-------VKNEGGECKPEGLFRRLPHLDM 307
Query: 282 GTELVRLASRCLQYEPRERPNPRSL 306
E L L
Sbjct: 308 WNEFFH---VMLNIPDCHHLPSLDL 329
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 34/209 (16%)
Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFT 219
I A++YC K + H DL A ++ D D+N +++ FG G +
Sbjct: 123 IVSAVQYCHQK--RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 220 PPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277
PE + G+ PE ++S G +L L+SG +P +N++ L + L G++
Sbjct: 181 APELFQ-GKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231
Query: 278 S--SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP 335
T+ L R L P +R TL+ ++ + G
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRG----------TLE---QIMKDRWINA--GHEEDE 276
Query: 336 LSPLGDACLRMDLTAIHEILEKLGYKDDE 364
L P + L + +I+ +GY +E
Sbjct: 277 LKPFVEPELDISDQKRIDIMVGMGYSQEE 305
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 8e-06
Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 37/197 (18%)
Query: 133 EYMPNDTLAKHLFH-WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL---NAYRIV 188
+ + L + + + + L + + IAEA+E+ SK ++ DL N I
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-GLMHRDLKPSN---IF 196
Query: 189 FDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TP---------------E 232
F D ++ FGL+ T L P TG+V T +
Sbjct: 197 FTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHK 256
Query: 233 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLA 289
++S G +L +LL ++ +TD +F + + + +
Sbjct: 257 VDIFSLGLILFELLYSF--STQMER-------VRIITDVR-NLKFPLLFTQKYPQEHMMV 306
Query: 290 SRCLQYEPRERPNPRSL 306
L P ERP +
Sbjct: 307 QDMLSPSPTERPEATDI 323
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 8e-06
Identities = 15/103 (14%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K +G+ ++ + F +IE Y + ++ T R+ + + A++ + A
Sbjct: 9 KAEGNKFYKARQFDEAIEHYNKAWELHK--DITYLNNRAAAEYEKGEYETAISTLNDAVE 66
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 488
+ + + +G L++ I +KS
Sbjct: 67 QGREMRADYKVISKSFARIGNAYHKLGDLKKT-IEYYQKSLTE 108
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 388 KGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLMSDMPQEALNDASQAQ 444
+G F D+ +++ YT+ I +P ++ R+ + EA+ D ++A
Sbjct: 145 EGKEYFTKSDWPNAVKAYTEMIKR----APEDARGYSNRAAALAKLMSFPEAIADCNKAI 200
Query: 445 VISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 488
P + A +A A A+ + A L A + + N
Sbjct: 201 EKDPNFVRAYIRKATAQIAVKEYASALETLDAARTK-DAEVNNG 243
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 37/164 (22%), Positives = 57/164 (34%), Gaps = 46/164 (28%)
Query: 163 HIAEALEYCTSKERALYHDLN-AYR------IVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215
+ E + H LN +R I+ DDD+N +L+ FG G
Sbjct: 132 ALLEVICAL--------HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE- 182
Query: 216 LAFTP----PEYLRTGRV------TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 265
+ TP PE + E M+S G ++ LL+G PP R
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRKQ 234
Query: 266 QTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRER 300
+ + G + SD +LV R L +P++R
Sbjct: 235 MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKR 275
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 45/250 (18%), Positives = 92/250 (36%), Gaps = 20/250 (8%)
Query: 66 GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
GE + +V + + ++AVK + E + ++ + +
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
G+E ++ E++ L + + V + +AL Y ++ ++ D+ +
Sbjct: 114 GEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKS 169
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D +LS FG +L TP PE + E ++S G
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
++++++ G+ P A+ +RD L +S + S L R L +
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---HKVSP----VLRDFLERMLVRD 282
Query: 297 PRERPNPRSL 306
P+ER + L
Sbjct: 283 PQERATAQEL 292
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 50/273 (18%), Positives = 90/273 (32%), Gaps = 60/273 (21%)
Query: 73 VYKG--KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL- 129
V K L++++ A+K+ + L E + L ++ + E +
Sbjct: 22 VVKARNALDSRYY-AIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79
Query: 130 ------------LVAEYMPNDTLAKHLFHWETQPMKW--AMRLRVALHIAEALEYCTSKE 175
+ EY N TL + ++ + R+ I EAL Y S+
Sbjct: 80 PMTAVKKKSTLFIQMEYCENGTLYDLI---HSENLNQQRDEYWRLFRQILEALSYIHSQG 136
Query: 176 RALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--------------TP 220
+ H DL I D+ N ++ FGL KN + T
Sbjct: 137 --IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA 194
Query: 221 ----PEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSHA------LDLIRDRNIQTLT 269
E L TG + MYS G + +++ P S L +R +I+
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIE--- 247
Query: 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
F ++ ++ + ++P +RP
Sbjct: 248 ---FPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 1e-05
Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 6/126 (4%)
Query: 364 EGAATELSFQMWTGQMQETLNS-KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFAR 422
+G + M G ++TL G ++ + + + + + F
Sbjct: 3 DGG----TLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLG 57
Query: 423 RSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILEN 482
+ ++AL S ++ + A LG + A++ A L
Sbjct: 58 LGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAA 117
Query: 483 KKSANA 488
+ A+
Sbjct: 118 AQPAHE 123
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 47/293 (16%), Positives = 86/293 (29%), Gaps = 57/293 (19%)
Query: 61 IVSEHGEKAPNVVYKGKLENQFR-IAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLA 116
++ HG P ++ R +A+ D Q L + ++ +A
Sbjct: 35 LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
+L L+VAE++ +L + +T P +R +A A + +
Sbjct: 95 RVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGA-IRAMQSLAAAADA--AHRA 148
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKN---SRDGRSYSTNLAFTPPEYLRTGRVTPES 233
+ +P S DG A P P+
Sbjct: 149 GVAL-----S-----IDHPS--------RVRVSIDGDVVLAYPATMPD-------ANPQD 183
Query: 234 VMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--------GQFSSDEGTEL 285
+ G L LL + P L L + + D ++
Sbjct: 184 DIRGIGASLYALLVNR--WP-----LPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI 236
Query: 286 VRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSP 338
+A+R +Q + R T L +Q+ T V + P A + +P
Sbjct: 237 SAVAARSVQGDGGIRSAS----TLLNLMQQATAVADRTEVLGPIDEAPVSAAP 285
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 20/250 (8%)
Query: 66 GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
GDE +V EY+ +L + M V +ALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKS 144
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
+ ++++ G+ + P AL LI L + + S+ +RCL+ +
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---EKLSA----IFRDFLNRCLEMD 257
Query: 297 PRERPNPRSL 306
+R + + L
Sbjct: 258 VEKRGSAKEL 267
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 45/269 (16%)
Query: 72 VVYKG--KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER 128
VV++ K+++ A+KR AR+ + E +A+ +L + + E +
Sbjct: 20 VVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 129 L------------LVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKE 175
+ + + L + T + + ++ L + L IAEA+E+ SK
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG 138
Query: 176 RALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TP-- 231
L H DL I F D ++ FGL+ T L P TG+V T
Sbjct: 139 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLY 196
Query: 232 -------------ESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-RNIQTLTDSCLEGQF 277
+ ++S G +L +LL P S ++ +R +++ L L Q
Sbjct: 197 MSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVRTLTDVRNLKFPPLFTQK 252
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ L P ERP ++
Sbjct: 253 YP----CEYVMVQDMLSPSPMERPEAINI 277
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 16/181 (8%)
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
+ E+ TL + + + + + L + I + ++Y SK + + DL I
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFL 155
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
D ++ FGL+ + ++ + + T PE + + E +Y+ G +L +L
Sbjct: 156 VDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305
L A + + L D + F + L + L +P +RPN
Sbjct: 215 LH----VCDTAFE--TSKFFTDLRDGIISDIFDK----KEKTLLQKLLSKKPEDRPNTSE 264
Query: 306 L 306
+
Sbjct: 265 I 265
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 5e-05
Identities = 39/164 (23%), Positives = 59/164 (35%), Gaps = 46/164 (28%)
Query: 163 HIAEALEYCTSKERALYHDLN-AYR------IVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215
+ EA+ + H N +R I+ DD++ RLS FG + G
Sbjct: 208 SLLEAVSFL--------HANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE- 258
Query: 216 LAFTP----PEYLRTGRV------TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 265
L TP PE L+ E +++ G +L LL+G PP R
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRRQ 310
Query: 266 QTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRER 300
+ +EGQ+ S +L+ R LQ +P R
Sbjct: 311 ILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS---RLLQVDPEAR 351
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 5e-05
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 23/174 (13%)
Query: 86 VKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF 145
+KRF R E QL ++ + +++ E D LV EY+ TL++++
Sbjct: 55 LKRFER-----------EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE 103
Query: 146 HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMK 204
P+ + I + +++ + + + H D+ I+ D + ++ FG+ K
Sbjct: 104 --SHGPLSVDTAINFTNQILDGIKH--AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159
Query: 205 NSRDGRSYSTNLAF-TP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
+ TN T PE + + +YS G +L ++L G+ PP
Sbjct: 160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 6e-05
Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 42/161 (26%)
Query: 164 IAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRDGRSYS 213
I EA+ Y H+ +R +++ D +++ FGL K
Sbjct: 157 ILEAVAYL--------HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 214 TNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT 269
T + TP PE LR PE M+S G + LL G P + +R Q +
Sbjct: 209 T-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG--FEPFYD-----ERGDQFMF 260
Query: 270 DSCLEGQFS---------SDEGTELVRLASRCLQYEPRERP 301
L ++ S +LVR + + +P++R
Sbjct: 261 RRILNCEYYFISPWWDEVSLNAKDLVR---KLIVLDPKKRL 298
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 45/190 (23%), Positives = 71/190 (37%), Gaps = 21/190 (11%)
Query: 130 LVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH----DLN 183
+V EY LA + E Q + LRV + AL+ C + + DL
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFG 239
+ D N +L FGL + S++ TP PE + +S ++S G
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQYE 296
LL +L + PP A + + L EG+F EL + +R L +
Sbjct: 204 CLLYELCALM--PPFTA------FSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLK 255
Query: 297 PRERPNPRSL 306
RP+ +
Sbjct: 256 DYHRPSVEEI 265
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 42/259 (16%), Positives = 78/259 (30%), Gaps = 39/259 (15%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDE 127
V + L + A+KR D + EA + + L+ C E
Sbjct: 45 VDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYH-DLNA 184
L+ + TL + + + L + L I LE +K H DL
Sbjct: 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK--GYAHRDLKP 162
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG----------------R 228
I+ D+ P L G M + S +
Sbjct: 163 TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222
Query: 229 VTPESVMYSFGTLLLDLLSGKH-----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
+ + ++S G +L ++ G+ ++ L + + SS
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSP----RHSSA--- 275
Query: 284 ELVRLASRCLQYEPRERPN 302
L +L + + +P +RP+
Sbjct: 276 -LWQLLNSMMTVDPHQRPH 293
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 1e-04
Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 17/113 (15%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSP-----------------TAFARRSLSYL 428
++KG+ F KD++ +I+ Y + + +A S YL
Sbjct: 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL 74
Query: 429 MSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481
EA +S+ A + +A A A K +EA+ L+
Sbjct: 75 NIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 48/273 (17%), Positives = 104/273 (38%), Gaps = 33/273 (12%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWPDAR---QFLEEARAVGQLRNRRLANLLGCCCEGDER 128
VY+ L + +A+K+ DA+ ++E + QL + + E +E
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107
Query: 129 LLVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
+V E L++ + F + + + + + + ALE+ S+ R ++ D+
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPAN 166
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLL 242
+ +L GL + + + +L TP PE + +S ++S G LL
Sbjct: 167 VFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 226
Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-------SDEGTELVRLASRCLQY 295
++ + + P + N+ +L + + S+E +LV + C+
Sbjct: 227 YEMAALQ--SPFYG----DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV---NMCINP 277
Query: 296 EPRERPNPRSL------VTALVTLQKDTEVPSH 322
+P +RP+ + + A + H
Sbjct: 278 DPEKRPDVTYVYDVAKRMHACTASSLEHHHHHH 310
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 19/128 (14%)
Query: 373 QMWTGQMQETLNS----KKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----------- 417
++ +E + S K++G+ F+ + +I Y + +D
Sbjct: 25 SIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKK 84
Query: 418 ----TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAA 473
+ + Y + +A++ AS+ I A Y A G EA+
Sbjct: 85 NIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKEN 144
Query: 474 LREASILE 481
L +A+ L
Sbjct: 145 LYKAASLN 152
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 45/241 (18%), Positives = 80/241 (33%), Gaps = 28/241 (11%)
Query: 73 VYKG-KLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 128
V+K E+ AVKR D + L E + ++ ++ L EG
Sbjct: 73 VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 188
L E L +H W + A AL + S+ ++ D+ I
Sbjct: 133 YLQTELCGPS-LQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIF 189
Query: 189 FDDDVNPRLSCFGLMK--------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
+L FGL+ ++G + PE L+ + ++S G
Sbjct: 190 LGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-----YMAPELLQGSY-GTAADVFSLGL 243
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+L++ P Q L L +F++ +EL + L+ +P+ R
Sbjct: 244 TILEVACNME-LPHGG------EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLR 296
Query: 301 P 301
Sbjct: 297 A 297
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 43/161 (26%)
Query: 163 HIAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRDGRSY 212
+ AL Y H + ++ I+F ++ FGL + +
Sbjct: 132 QMMNALAYF--------HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183
Query: 213 STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
+ T PE + VT + ++S G ++ LL+G P +++ +
Sbjct: 184 TNAAG-TALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEV 233
Query: 269 TDSCLEGQFS--------SDEGTELVRLASRCLQYEPRERP 301
+ + + + +L++ + L +P RP
Sbjct: 234 QQKATYKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRP 271
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 35/254 (13%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 127
V++ E + A+K N + E + +L+ + ++ L D+
Sbjct: 43 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-ITDQ 101
Query: 128 RL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
+ +V E D L L ++ ++ EA+ + H DL
Sbjct: 102 YIYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPA 156
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRS--YSTNLAFTP----PEYLR-----------TGR 228
+ D +L FG+ + + + T PE ++ +
Sbjct: 157 NFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287
++P+S ++S G +L + GK P ++ I + + D E +F +L
Sbjct: 216 ISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQD 271
Query: 288 LASRCLQYEPRERP 301
+ CL+ +P++R
Sbjct: 272 VLKCCLKRDPKQRI 285
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 53/247 (21%), Positives = 93/247 (37%), Gaps = 41/247 (16%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-----RRLA--NLLG--CC 122
VY + +++F +A+K ++ LE+A QLR L N+L
Sbjct: 25 VYLAREKQSKFILALKVLFKAQ-------LEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 123 CEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
R+ L+ EY P T+ + L + +A AL YC SK + H
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSKR--VIHR 133
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSF 238
D+ ++ +++ FG ++ R L + PPE + + ++S
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-----SDEGTELVRLASRCL 293
G L + L GK PP Q +F+ ++ +L+ SR L
Sbjct: 194 GVLCYEFLVGK--PP------FEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLL 242
Query: 294 QYEPRER 300
++ P +R
Sbjct: 243 KHNPSQR 249
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 48/246 (19%), Positives = 84/246 (34%), Gaps = 34/246 (13%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V++ K + F+ AVK+ R EE A L + R+ L G EG +
Sbjct: 74 VHRMKDKQTGFQCAVKKVRL---EVFRV--EELVACAGLSSPRIVPLYGAVREGPWVNIF 128
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E + +L + + + L E LEY ++ R L+ D+ A ++
Sbjct: 129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSS 185
Query: 192 D-VNPRLSCFGLMKNSRDGRSYSTNLAF-----TP----PEYLRTGRVTPESVMYSFGTL 241
D L FG + + L T PE + + ++S +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 242 LLDLLSGKH----IPPSHALDLIRDRN--IQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
+L +L+G H I I+ + SC + + ++ L+
Sbjct: 246 MLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC------APLTAQAIQ---EGLRK 296
Query: 296 EPRERP 301
EP R
Sbjct: 297 EPVHRA 302
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A Length = 151 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 4e-04
Identities = 6/91 (6%), Positives = 21/91 (23%), Gaps = 1/91 (1%)
Query: 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 446
+ + + + + Y + + Q+A + + A +
Sbjct: 41 SYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99
Query: 447 SPVWHMAAYLQAAALFALGKENEAQAALREA 477
+ + L +A+
Sbjct: 100 GKNDYTPVFHTGQCQLRLKAPLKAKECFELV 130
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 45/200 (22%), Positives = 72/200 (36%), Gaps = 35/200 (17%)
Query: 119 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSK 174
L E + L LV M L H++H A R + AE LE +
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFYAAEICCGLEDLHRE 305
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--TPPEYLRTGRVTPE 232
R +Y DL I+ DD + R+S GL + +G++ T Y+ PE
Sbjct: 306 -RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG---RVGT-VGYM-----APE 355
Query: 233 SVMY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSD 280
V + G LL ++++G+ P + + + E +S
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK--KKIKREEVERLVKEVPEEYSER 411
Query: 281 EGTELVRLASRCLQYEPRER 300
+ L S+ L +P ER
Sbjct: 412 FSPQARSLCSQLLCKDPAER 431
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 24/193 (12%)
Query: 119 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSK 174
+ ++L + + M L HL + + AE LE+ ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNR 311
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
+Y DL I+ D+ + R+S GL + + ++ T PE L+ G
Sbjct: 312 -FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--SVGTHGYMAPEVLQKGVAY 368
Query: 231 PESVMY-SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSDEGTELVR 287
S + S G +L LL G P ++ + L EL
Sbjct: 369 DSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 288 LASRCLQYEPRER 300
L LQ + R
Sbjct: 424 LLEGLLQRDVNRR 436
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Query: 119 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
L + +RL V EY L HL E + R A I AL+Y S++
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGA-EIVSALDYLHSEKNV 270
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAF--TPPEYLRTGRVTPESV 234
+Y DL ++ D D + +++ FGL K +DG + T F T PEYL PE +
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEYL-----APEVL 321
Query: 235 MY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG--QFSSDEG 282
G ++ +++ G+ P +++ + L + L +F G
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELILMEEIRFPRTLG 373
Query: 283 TELVRLASRCLQYEPRER 300
E L S L+ +P++R
Sbjct: 374 PEAKSLLSGLLKKDPKQR 391
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 45/242 (18%), Positives = 78/242 (32%), Gaps = 51/242 (21%)
Query: 85 AVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN----DTL 140
A K D +E + + LR+ L NL + +E +++ E+M + +
Sbjct: 186 AAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV 245
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYR------IVFDDDV 193
A MR + + L + H+ N + I+F
Sbjct: 246 ADEHNKMSEDEAVEYMR-----QVCKGLCHM--------HENNYVHLDLKPENIMFTTKR 292
Query: 194 NPRLSC--FGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLS 247
+ L FGL + +S T PE V + M+S G L LLS
Sbjct: 293 SNELKLIDFGLTAHLDPKQSVKVTTG-TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 351
Query: 248 GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPR 298
G + P N + ++ S++G + +R + L +P
Sbjct: 352 G--LSP------FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR---KLLLADPN 400
Query: 299 ER 300
R
Sbjct: 401 TR 402
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 7e-04
Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 44/166 (26%)
Query: 159 RVALHIAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRD 208
R+ + + Y H N +R I+ + D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYM--------HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 209 GRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264
T PE LR G + ++S G +L LLSG PP + +N
Sbjct: 177 NTKMKD-RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGT--PPFYG------KN 226
Query: 265 IQTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRERP 301
+ G+++ SD+ +L+R + L + P R
Sbjct: 227 EYDILKRVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 9e-04
Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 33/253 (13%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 127
V++ E + A+K N + E + +L+ + ++ L
Sbjct: 71 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
+V E D L L ++ ++ EA+ + H DL
Sbjct: 131 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 185
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRS--YSTNLAFTP----PEYLR-----------TGRV 229
+ D +L FG+ + + + PE ++ ++
Sbjct: 186 FLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 230 TPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
+P+S ++S G +L + GK P ++ I + + D E +F +L +
Sbjct: 245 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 289 ASRCLQYEPRERP 301
CL+ +P++R
Sbjct: 301 LKCCLKRDPKQRI 313
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 488 | |||
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.97 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.91 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.84 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.82 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.8 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.75 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.74 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.74 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.71 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.71 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.71 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.67 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.66 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.66 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.65 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.62 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.59 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.59 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.59 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.58 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.56 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.56 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.56 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.55 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.54 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.54 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.54 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.54 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.54 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.54 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.53 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.52 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.52 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.51 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.51 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.5 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.5 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.5 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.49 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.48 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.48 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.48 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.47 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.46 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.46 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.46 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.45 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.45 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.44 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.42 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.41 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.4 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.4 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.39 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.38 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.38 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.36 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.35 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.35 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.35 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.33 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.33 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.32 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.31 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.31 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.31 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.3 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.3 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.3 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.3 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.3 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.29 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.28 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.28 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.27 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.27 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.27 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.27 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.27 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.26 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.26 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.26 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.26 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.26 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.26 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.26 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.26 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.25 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.25 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.25 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.25 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.24 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.24 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.24 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.24 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.23 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.23 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.22 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.22 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.22 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.22 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.21 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.21 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.21 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.2 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.19 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.19 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.19 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.19 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.19 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.18 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.17 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.17 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.17 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.16 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.15 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.15 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.15 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.15 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.15 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.13 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.12 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.12 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.11 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.09 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.09 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.08 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.08 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.06 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.05 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.05 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.04 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.04 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.03 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.03 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.03 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.02 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.02 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.01 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.01 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.01 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.0 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.99 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 98.99 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 98.99 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.99 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 98.98 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.97 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.96 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 98.96 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.96 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 98.95 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.95 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.95 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.94 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 98.94 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 98.94 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 98.93 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.93 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 98.92 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.91 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.9 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.9 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 98.89 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.89 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.89 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.88 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.88 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 98.88 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.88 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 98.87 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.87 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.86 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 98.86 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.84 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.84 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.84 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.84 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.83 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.81 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.81 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.79 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.78 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.78 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.78 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.77 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.76 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.76 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.75 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.74 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.74 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.74 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.72 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.7 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.68 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.66 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.63 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.59 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.55 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.53 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.51 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.5 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.5 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.5 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.45 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.43 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.43 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.41 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.4 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.33 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.3 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.29 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.27 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.26 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.23 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.21 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.19 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.18 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.14 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.09 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.06 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.04 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.99 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.98 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.96 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.94 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.91 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.87 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.86 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.77 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.74 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.65 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.65 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.62 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.57 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.52 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.52 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.52 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.44 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.44 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.29 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.28 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.27 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.26 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 97.18 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.12 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.11 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.09 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.08 |
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-58 Score=437.46 Aligned_cols=255 Identities=18% Similarity=0.274 Sum_probs=206.8
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
++++.+.++||+|+||+||+|.+.+ .||||+++.... ...+.|.+|+.+|++++|||||+++|++.+ +.++||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 5677788999999999999998654 599999975432 235679999999999999999999999865 56899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
||+||+|.++|... ...+++..+..|+.||+.||.|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 112 y~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~-~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 112 WCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred cCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 99999999999653 35699999999999999999999998 9999999999999999999999999999865432
Q ss_pred --CccccCCCCCCcccccc---CCCCCCccchhhHHHHHHHHhCCCCCCchhhH-HHhhccccccccccccCCCChHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....||+.|||||++.+ +.++.++|||||||+||||+||+.||...... .+..........+. ....+..++.
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 268 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-LSKLYKNCPK 268 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC-STTSCTTSCH
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC-cccccccchH
Confidence 23578999999999974 35899999999999999999999998653211 11111111111111 1233455778
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.+.+|+.+||+.||++|||+.+|+++|+.++..
T Consensus 269 ~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 269 AMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 899999999999999999999999999988753
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-58 Score=444.49 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=209.3
Q ss_pred cccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
++.+.++||+|+||+||+|.+. +++.||||+++.......++|.+|+.+|++++|||||+++|+|.+.+..+||
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4556678999999999999854 4788999999876655567899999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeee
Q 011353 132 AEYMPNDTLAKHLFHWE-------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS 198 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 198 (488)
||||++|+|.++|+... ..+++|..++.|+.||+.||.|||++ +||||||||+|||+++++.+||+
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEEC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHhhEEECCCCcEEEc
Confidence 99999999999997532 24699999999999999999999998 99999999999999999999999
Q ss_pred cCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccc
Q 011353 199 CFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 271 (488)
Q Consensus 199 DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 271 (488)
|||+++..... ....||+.|||||++.+..++.++|||||||+||||+| |+.||..............
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~----- 275 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ----- 275 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHH-----
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----
Confidence 99999865332 23467899999999999999999999999999999999 8988876432222111111
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
......|..+++++.+|+.+||+.||++|||+.+|+++|+.+.+.+
T Consensus 276 g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 276 GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 1122345567789999999999999999999999999999997653
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-59 Score=441.58 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=212.2
Q ss_pred cccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
++.+.++||+|+||+||+|.+. ++..||||+++.......++|.+|+.+|++++|||||+++|+|.+.+..+||
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 4567788999999999999853 4778999999876555567899999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecC
Q 011353 132 AEYMPNDTLAKHLFHW-----------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (488)
||||++|+|.++|+.. ....++|..++.|+.||+.||.|||++ +||||||||+|||+++++.+||+||
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccCHhhEEECCCCcEEECCc
Confidence 9999999999999753 234699999999999999999999998 9999999999999999999999999
Q ss_pred CCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccc
Q 011353 201 GLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 273 (488)
Q Consensus 201 Gla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
|+++..... ....||+.|||||++.+..++.++|||||||+||||+| |+.||.......+...... ..
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~-----~~ 247 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ-----GR 247 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH-----TC
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----CC
Confidence 999865432 23357899999999999999999999999999999999 8888876433222211111 11
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
....|..++.++.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 248 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 248 VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 1234555778999999999999999999999999999988764
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-59 Score=442.62 Aligned_cols=252 Identities=20% Similarity=0.278 Sum_probs=210.8
Q ss_pred CCcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
++..+++++||+|+||+||+|.+. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+.+..
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 456678899999999999999862 467899999976543 3457899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (488)
+||||||++|+|.++|.... ...++|..++.|+.||+.||.|||++ +||||||||+|||++++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCccccceEECCCCC
Confidence 99999999999999996422 23589999999999999999999998 9999999999999999999
Q ss_pred eeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccc
Q 011353 195 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 267 (488)
Q Consensus 195 ~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 267 (488)
+||+|||+++..... ....||+.|||||++.++.++.++|||||||+||||+| |+.||.+.....+.....
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~-- 261 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR-- 261 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH--
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--
Confidence 999999999864322 33467899999999999999999999999999999999 788887643322221111
Q ss_pred cccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.......|..++..+.+|+.+||+.||++|||+.+|+++|+.+
T Consensus 262 ---~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 262 ---NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ---TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---cCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1111234556778899999999999999999999999999865
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-58 Score=445.26 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=207.7
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.+|+++++||+|+||+||+|. ..+|+.||||+++..... ..+.+.+|+.+|++|+|||||++++++.+.+.+|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 579999999999999999999 467999999999765332 35679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
||+||+|.++|...+...+++..++.|+.||+.||.|||++ |||||||||+||||+.+|++||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 99999999999766666789999999999999999999999 9999999999999999999999999999876543
Q ss_pred CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
....||+.|||||++.+..|+.++|||||||+||||+||+.||.+............... ...+...+.++.+||
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-----~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-----PPVSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----CCCCTTSCHHHHHHH
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----CCCCccCCHHHHHHH
Confidence 235699999999999999999999999999999999999999986543332222211111 123345678899999
Q ss_pred HHhccCCCCCCCChHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~ 309 (488)
.+||+.||++|||+.++++|
T Consensus 258 ~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHTCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999986
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-58 Score=442.04 Aligned_cols=246 Identities=17% Similarity=0.229 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..|+++++||+|+||+||+|.. .+|+.||||+++.......+.+.+|+.+|+.++|||||+++++|.+.+.+|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 3488899999999999999994 579999999997655555667899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
+||+|.+++.+ +.+++..+..|+.||+.||.|||++ |||||||||+||||+.+|++||+|||+|+..... ..
T Consensus 154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 99999999964 4599999999999999999999999 9999999999999999999999999999875433 35
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..||+.|||||++.+..|+.++|||||||++|||+||+.||.+............... + ....+...++++.+||.+
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~--~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-P--RLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-C--CCSCGGGSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-C--CCCccccCCHHHHHHHHH
Confidence 6799999999999999999999999999999999999999876533222111111111 0 111234567899999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||+.||++|||+.++++|
T Consensus 307 ~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 307 LLVRDPAQRATAAELLKH 324 (346)
T ss_dssp HSCSSTTTSCCHHHHTTC
T ss_pred HcCCChhHCcCHHHHhcC
Confidence 999999999999999887
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-57 Score=436.23 Aligned_cols=259 Identities=17% Similarity=0.123 Sum_probs=213.6
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+..+.+.++||+|+||+||+|. ..+|+.||||+++.... ..+|+.+|+.++|||||++++++.+.+.+||||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 4567788889999999999999 46799999999976432 24799999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-CeeeecCCCccccCCC----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~DfGla~~~~~~---- 209 (488)
|+||+|.++|.+ .+.+++..+..|+.||+.||.|||++ +||||||||+||||+.+| ++||+|||+|+.....
T Consensus 132 ~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999999975 35699999999999999999999999 999999999999999887 6999999999865432
Q ss_pred -----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
....||+.|||||++.+..++.++|||||||++|||+||+.||.......+........ .....++..+++.
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~s~~ 285 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP---PPIREIPPSCAPL 285 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSC---CGGGGSCTTSCHH
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCC---CCchhcCccCCHH
Confidence 22468999999999999999999999999999999999999986542211111111100 0111244557789
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCCCCccccc
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLM 325 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~~~~~~~ 325 (488)
+.+||.+||+.||.+|||+.|++++|...........+++.
T Consensus 286 ~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~ 326 (336)
T 4g3f_A 286 TAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK 326 (336)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred HHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence 99999999999999999999999999887765554444443
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-57 Score=477.83 Aligned_cols=238 Identities=18% Similarity=0.219 Sum_probs=194.4
Q ss_pred CcccccccCCCCCCCeEEEEEeC--CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe-----e
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-----R 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~ 128 (488)
..|++++.||+|+||+||+|... +++.||||++..... .....+.+|+.++..++||||+++++++.+.+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57888999999999999999964 688999999875432 234568999999999999999999999987765 6
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
+|||||++|++|.+++. ..+++..++.|+.||+.||.|||++ |||||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~-giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSI-GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 99999999999998873 2699999999999999999999999 99999999999999875 999999999998877
Q ss_pred CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 209 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
.....||+.|+|||++.+.. +.++|||||||++|+|++|..|+..... ..+. ........+..+.+|
T Consensus 234 ~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~--------~~~~----~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV--------DGLP----EDDPVLKTYDSYGRL 300 (681)
T ss_dssp CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC--------SSCC----TTCHHHHHCHHHHHH
T ss_pred CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc--------cccc----ccccccccCHHHHHH
Confidence 77778999999999998654 8899999999999999999866543211 0110 111112345789999
Q ss_pred HHHhccCCCCCCCC-hHHHHHHHHhh
Q 011353 289 ASRCLQYEPRERPN-PRSLVTALVTL 313 (488)
Q Consensus 289 i~~cl~~~p~~Rps-~~~il~~L~~~ 313 (488)
+.+||+.||.+||+ +.++...|..+
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHH
Confidence 99999999999996 55555556554
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-57 Score=430.24 Aligned_cols=244 Identities=17% Similarity=0.184 Sum_probs=210.2
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC---CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.+|++++.||+|+||+||+|. ..+++.||||++++. .....+.+.+|+++|++++|||||++++++.+.+.+||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 468899999999999999999 567999999999743 2234567999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
|||+||+|.++|.+ .+.+++..+..++.||+.||.|||++ +||||||||+|||++.++++||+|||+|+.....
T Consensus 112 Ey~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999999999975 35699999999999999999999999 9999999999999999999999999999875422
Q ss_pred ---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
.+..||+.|||||++.+..++.++||||+||++|||+||+.||.+.....+....... ...++...++++.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 262 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL------EYDFPEKFFPKAR 262 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTCCHHHH
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCcccCHHHH
Confidence 3457999999999999999999999999999999999999999765443332222111 1124455678899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+||.+||+.||++|||+.+++.+
T Consensus 263 dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGTCH
T ss_pred HHHHHHccCCHhHCcChHHHcCC
Confidence 99999999999999999997655
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-57 Score=443.30 Aligned_cols=246 Identities=17% Similarity=0.223 Sum_probs=210.9
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..|+++++||+|+||.||+|. ..+|+.||||+++.......+.+.+|+.+|+.++|||||+++++|.+.+.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 458899999999999999999 4679999999998766566677999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
+||+|.+++.. +.+++..+..|+.||+.||.|||++ |||||||||+||||+.+|.+||+|||+|+..... ..
T Consensus 231 ~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~-~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 231 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred CCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 99999999964 4599999999999999999999999 9999999999999999999999999999875433 35
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..||+.|||||++.+..|+.++|||||||++|||++|+.||.+............... . ....+...+.++.+||.+
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~--~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-P--RLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-C--CCSCTTSSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-C--CCcccccCCHHHHHHHHH
Confidence 6799999999999999999999999999999999999999876533222211111111 0 111223467889999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||+.||++|||+.++++|
T Consensus 384 ~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 384 LLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HSCSSTTTSCCHHHHTTC
T ss_pred HcCCChhHCcCHHHHhcC
Confidence 999999999999999887
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=417.74 Aligned_cols=244 Identities=19% Similarity=0.259 Sum_probs=196.7
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..+|++++.||+|+||+||+|. ..+|+.||||+++.... .....+.+|+.+|++++|||||++++++.+.+..+||
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 3578899999999999999999 56799999999975432 2356799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+ +|+|.+++.+ .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++++||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 9999 6799999975 45699999999999999999999999 9999999999999999999999999999875543
Q ss_pred -CccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....||+.|||||++.+..+ +.++||||+||++|+|+||+.||................ ..++...++++.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV------YTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC------CCCCTTSCHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHH
Confidence 34679999999999998776 579999999999999999999998754433322211111 1234456788999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
|+.+||+.||++|||+.++++|
T Consensus 242 li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHC
T ss_pred HHHHHccCChhHCcCHHHHHcC
Confidence 9999999999999999999987
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=421.45 Aligned_cols=242 Identities=19% Similarity=0.249 Sum_probs=197.6
Q ss_pred cccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEee----CCeeEEEE
Q 011353 60 NIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVA 132 (488)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 132 (488)
++..+||+|+||+||+|.. .++..||||++..... ...+.|.+|+.+|++|+|||||+++++|.+ .+.++|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4556789999999999994 5689999999965432 235679999999999999999999999865 34589999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccCcceeeC-CCCCeeeecCCCccccCCC
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--iiH~Dlkp~Nill~-~~~~~kl~DfGla~~~~~~ 209 (488)
|||+||+|.+++.+ .+.+++..+..|+.||+.||.|||++ + ||||||||+|||++ .+|.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 99999999999975 45699999999999999999999998 7 99999999999997 4799999999999865443
Q ss_pred --CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh-HHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
....||+.|||||++. +.++.++|||||||++|||+||+.||..... ..+.......... ..++...++++.
T Consensus 186 ~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~ 260 (290)
T 3fpq_A 186 FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP----ASFDKVAIPEVK 260 (290)
T ss_dssp SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC----GGGGGCCCHHHH
T ss_pred ccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC----CCCCccCCHHHH
Confidence 3457999999999987 4699999999999999999999999864321 1111111111111 112223456899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+||.+||+.||++|||+.++++|
T Consensus 261 ~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 261 EIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhHCcCHHHHhcC
Confidence 99999999999999999999886
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-57 Score=426.41 Aligned_cols=244 Identities=17% Similarity=0.187 Sum_probs=200.5
Q ss_pred CcccccccCCCCCCCeEEEEEe----CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
++|++++.||+|+||+||+|.. .+++.||||+++.... ....++.+|+.+|++++|||||++++++.+.+.+||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4689999999999999999984 2478999999975422 223468899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~-- 208 (488)
|||||+||+|.++|.+ .+.+++..+..++.||+.||.|||++ |||||||||+|||++.+|++||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 9999999999999975 35699999999999999999999999 999999999999999999999999999986432
Q ss_pred --CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 209 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
.....||+.|||||++.+..++.++|||||||++|||+||+.||.+............. ...+|...++++.
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 254 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQ 254 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCcCCHHHH
Confidence 23467999999999999999999999999999999999999999865433322221111 1123455678899
Q ss_pred HHHHHhccCCCCCCCCh-----HHHHHH
Q 011353 287 RLASRCLQYEPRERPNP-----RSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~-----~~il~~ 309 (488)
+|+.+||+.||++|||+ +++++|
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 99999999999999985 566665
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-56 Score=429.06 Aligned_cols=256 Identities=20% Similarity=0.258 Sum_probs=210.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEeCC------CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCC-CCcccEEEEEeeC-
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRN-RRLANLLGCCCEG- 125 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~- 125 (488)
..+++++.+.||+|+||+||+|.+.+ ++.||||+++..... ..+.|.+|+.+|.+++| ||||+++|+|.+.
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 34678889999999999999998432 367999999865433 35579999999999965 8999999999764
Q ss_pred CeeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC
Q 011353 126 DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191 (488)
Q Consensus 126 ~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~ 191 (488)
+.++||||||++|+|.++|+... ...+++..+..|+.||+.||.|||++ +||||||||+|||+++
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-~iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSE 220 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECG
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC-CeecCccCccceeeCC
Confidence 56899999999999999997532 24589999999999999999999999 9999999999999999
Q ss_pred CCCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcc
Q 011353 192 DVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 264 (488)
Q Consensus 192 ~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~ 264 (488)
++.+||+|||+|+...... ...||+.|||||++.+..++.++|||||||+||||+| |+.||++.......
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~--- 297 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--- 297 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH---
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH---
Confidence 9999999999998754332 2357899999999999999999999999999999998 88888753211110
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
...+........|..+++++.++|..||+.||++|||+.+|+++|+.+.+
T Consensus 298 -~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 298 -CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp -HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 01111111223445567889999999999999999999999999998754
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-54 Score=413.55 Aligned_cols=248 Identities=16% Similarity=0.223 Sum_probs=194.7
Q ss_pred ccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHH--HHHHHHHhccCCCCcccEEEEEeeCC----eeEEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF--LEEARAVGQLRNRRLANLLGCCCEGD----ERLLVA 132 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 132 (488)
+.+.++||+|+||+||+|.+ +|+.||||+++... .+.+ ..|+..+.+++|||||+++++|.+.+ .++|||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 45567789999999999998 57899999997532 3333 44566667889999999999998764 579999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
|||++|+|.++|+. .+++|..+.+++.|++.||.|||++ .+||||||||+|||++.++++||+|||+++.
T Consensus 81 Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 99999999999964 4599999999999999999999974 2799999999999999999999999999986
Q ss_pred cCCC--------CccccCCCCCCccccccC------CCCCCccchhhHHHHHHHHhCCCCCCchh---------------
Q 011353 206 SRDG--------RSYSTNLAFTPPEYLRTG------RVTPESVMYSFGTLLLDLLSGKHIPPSHA--------------- 256 (488)
Q Consensus 206 ~~~~--------~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg~~p~~~~~--------------- 256 (488)
.... ....||+.|||||++.+. .++.++|||||||+||||+||..|+....
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 5432 124689999999999764 36779999999999999999986553211
Q ss_pred hHHHhhccccccccccccCCCC-----hHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 257 LDLIRDRNIQTLTDSCLEGQFS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
...+.. .+.....+..+| ...+..+.+|+.+||+.||++|||+.+|++.|+.+.+..
T Consensus 238 ~~~~~~----~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 238 VEEMRK----VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHH----HHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHH----HHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 001110 011111122222 245678999999999999999999999999999987654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-54 Score=406.41 Aligned_cols=241 Identities=18% Similarity=0.244 Sum_probs=190.0
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCC---------
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD--------- 126 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--------- 126 (488)
+|++++.||+|+||+||+|. ..+|+.||||+++..... ..+.+.+|+.+|++|+|||||+++++|.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 57888999999999999999 457899999999755433 3456999999999999999999999987654
Q ss_pred ---eeEEEEecCCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCC
Q 011353 127 ---ERLLVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (488)
Q Consensus 127 ---~~~lv~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGl 202 (488)
.+|||||||+||+|.+++..... ...++..++.|+.||+.||.|||++ |||||||||+|||++.++.+||+|||+
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~-~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC-cCccccCcHHHeEECCCCcEEEccCcc
Confidence 37999999999999999975322 2356777899999999999999999 999999999999999999999999999
Q ss_pred ccccCCC----------------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccc
Q 011353 203 MKNSRDG----------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 266 (488)
Q Consensus 203 a~~~~~~----------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 266 (488)
|+..... ....||+.|||||++.+..++.++|||||||++|||++ ||.............
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~- 240 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDV- 240 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH-
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHH-
Confidence 9865432 12468999999999999999999999999999999997 665432211110000
Q ss_pred ccccccccCCCC---hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 267 TLTDSCLEGQFS---SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 267 ~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....+| ...++.+.+|+.+||+.||.+|||+.++++|
T Consensus 241 ------~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 241 ------RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp ------HTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------hcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111222 2344667899999999999999999999886
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=406.27 Aligned_cols=249 Identities=15% Similarity=0.248 Sum_probs=200.6
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEee------CCe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE------GDE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 127 (488)
++|++++.||+|+||+||+|. ..+|+.||||+++.... ...+.+.+|+.+|+.|+|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 368999999999999999999 46799999999975432 234568899999999999999999999764 367
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
+|||||||+ |+|.+++.. .+.+++..+..++.||+.||.|||++ |||||||||+|||++.++.+||+|||+|+...
T Consensus 134 ~~ivmE~~~-g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 899999996 579999965 45799999999999999999999999 99999999999999999999999999998653
Q ss_pred C--------CCccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc-------cccccc
Q 011353 208 D--------GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------QTLTDS 271 (488)
Q Consensus 208 ~--------~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------~~~~~~ 271 (488)
. .....||+.|||||++.+. .++.++||||+||++|||+||+.||.+........... ......
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 2 2346789999999998875 46999999999999999999999997653221111000 000000
Q ss_pred -----------cccCC-------CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 -----------CLEGQ-------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 -----------~~~~~-------~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... ..+..+.++.+||.+||..||.+|||+.++++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 012246789999999999999999999999987
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=395.07 Aligned_cols=244 Identities=18% Similarity=0.227 Sum_probs=195.9
Q ss_pred cccccccCCCCCCCeEEEEEe----CCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.|+++++||+|+||+||+|+. .+++.||||++.... ...++.+|+.+|+.+ +|||||++++++.+.++++|||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 588999999999999999984 246789999987543 456788999999998 6999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC-CCeeeecCCCccccCCC--
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~DfGla~~~~~~-- 209 (488)
||++||+|.+++. .+++..+..++.||+.||.|||++ |||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 100 E~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~-gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 100 PYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF-GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp ECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred eCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 9999999999983 389999999999999999999999 99999999999999876 89999999999754321
Q ss_pred ------------------------------CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhH
Q 011353 210 ------------------------------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALD 258 (488)
Q Consensus 210 ------------------------------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 258 (488)
....||+.|+|||++.+. .++.++||||+||++|||+||+.||.....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence 124689999999999875 4899999999999999999999998543211
Q ss_pred HHhhccc-------------------------------ccc--------------ccc----cccCCCChHHHHHHHHHH
Q 011353 259 LIRDRNI-------------------------------QTL--------------TDS----CLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 259 ~~~~~~~-------------------------------~~~--------------~~~----~~~~~~~~~~~~~l~~li 289 (488)
...-..+ ... ... ..........++++.+|+
T Consensus 254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl 333 (361)
T 4f9c_A 254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL 333 (361)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence 0000000 000 000 000001123457899999
Q ss_pred HHhccCCCCCCCChHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~ 309 (488)
.+||+.||++|||+.++++|
T Consensus 334 ~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 334 DKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHTCSCTTTSCCHHHHHTS
T ss_pred HHHCcCChhHCcCHHHHhcC
Confidence 99999999999999999987
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=414.39 Aligned_cols=248 Identities=17% Similarity=0.142 Sum_probs=203.0
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC---CccHHHHHH---HHHHHhccCCCCcccEEEEEeeCCee
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLE---EARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~---e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
.++|++++.||+|+||.||+|. ..+|+.||||++++.. ......+.+ ++.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 5678999999999999999999 4679999999996421 112223333 46677788999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
|||||||+||+|.++|.+ .+.+++..+..++.||+.||.|||++ |||||||||+||||+.+|++||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~-gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999999975 35699999999999999999999999 999999999999999999999999999987654
Q ss_pred C--CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 209 G--RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 209 ~--~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
. .+.+||+.|||||++.. ..|+.++|||||||+||||++|..||.+........ ....... ....++...++++
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~-i~~~i~~--~~~~~p~~~S~~a 421 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT--MAVELPDSFSPEL 421 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH-HHHHHHH--CCCCCCTTSCHHH
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhhcC--CCCCCCccCCHHH
Confidence 3 45689999999999975 579999999999999999999999997542211000 0000000 1123455577899
Q ss_pred HHHHHHhccCCCCCCCC-----hHHHHHH
Q 011353 286 VRLASRCLQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps-----~~~il~~ 309 (488)
.+||.+||+.||.+|++ +.+|++|
T Consensus 422 ~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred HHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 99999999999999998 6788776
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=417.38 Aligned_cols=249 Identities=19% Similarity=0.149 Sum_probs=210.7
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
++|++++.||+|+||+||+|. ..+|+.||||++......+.+.+.+|+.+|+.|+|||||+++++|.+.+.++||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 468899999999999999999 4679999999998765555677999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC--CCeeeecCCCccccCCCC---
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--VNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~--~~~kl~DfGla~~~~~~~--- 210 (488)
+||+|.++|.+ ..+.+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++......
T Consensus 237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999999964 234699999999999999999999999 99999999999999754 899999999999876543
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...||+.|||||++.+..++.++|||||||++|||++|..||.+............... ..........+.++.+||.
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~dli~ 392 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIR 392 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCSGGGTTSCHHHHHHHH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHHH
Confidence 35789999999999999999999999999999999999999976543322221111100 0011112335678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||+.||.+|||+.++++|
T Consensus 393 ~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 393 KLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TTSCSSGGGSCCHHHHHHS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999887
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-48 Score=372.82 Aligned_cols=260 Identities=24% Similarity=0.426 Sum_probs=220.8
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
..|++.+.||+|+||.||+|...+++.||||++........+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (321)
T 2qkw_B 39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118 (321)
T ss_dssp CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCT
T ss_pred hccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCC
Confidence 45567777899999999999987899999999987665567789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----
Q 011353 137 NDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (488)
Q Consensus 137 ~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----- 209 (488)
+|+|.+++.... ...+++..++.++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++.....
T Consensus 119 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 197 (321)
T 2qkw_B 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197 (321)
T ss_dssp TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC-CeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 999999996533 23589999999999999999999998 9999999999999999999999999998764322
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh-----------HHHhhccccccccccccCCC
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----------DLIRDRNIQTLTDSCLEGQF 277 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 277 (488)
....+|+.|+|||++.+..++.++|||||||++|||+||+.||..... ............++......
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T 2qkw_B 198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277 (321)
T ss_dssp BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence 223478999999999988999999999999999999999988764321 11112233344444445556
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+...+..+.+++.+||+.||++|||+.+++++|+.+.+..
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 7788999999999999999999999999999999887643
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=369.57 Aligned_cols=246 Identities=20% Similarity=0.298 Sum_probs=209.6
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
....|++++.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 356788999999999999999995 6799999999975432 2355688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+++|+|.+++.. .+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 93 MEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp ECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred EECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 999999999999965 34699999999999999999999999 9999999999999999999999999999765443
Q ss_pred -CccccCCCCCCccccccCCCC-CCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....||+.|+|||++.+..++ .++|||||||++|+|+||+.||............... ....|...+.++.+
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~ 243 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG------KYRIPFYMSTDCEN 243 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHH
Confidence 345689999999999988765 7899999999999999999998776443333222111 11233445678999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
|+.+||..||.+|||+.++++|
T Consensus 244 li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 244 LLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHCCCChhHCcCHHHHhcC
Confidence 9999999999999999999987
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=368.30 Aligned_cols=255 Identities=19% Similarity=0.260 Sum_probs=212.6
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
++|.+.+.||+|+||+||+|.. .+++.||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 4677888899999999999995 568999999987665555678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----- 210 (488)
++|+|.+++... ...+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++......
T Consensus 90 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 90 KGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp TTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred CCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 999999999763 35699999999999999999999999 99999999999999999999999999997654321
Q ss_pred -------------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCC
Q 011353 211 -------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (488)
Q Consensus 211 -------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
...||+.|+|||++.+..++.++|||||||++|+|++|..|++........ .............
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~ 244 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---FGLNVRGFLDRYC 244 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---SSBCHHHHHHHTC
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---HhhhhhccccccC
Confidence 346889999999999999999999999999999999999877543211100 0000001111122
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
+..++..+.+++.+||+.||++|||+.++++.|+.++..
T Consensus 245 ~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 344556799999999999999999999999999999864
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=365.48 Aligned_cols=247 Identities=17% Similarity=0.240 Sum_probs=209.2
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
...|++++.||+|+||+||+|. ..+++.||||++........+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 3568888999999999999999 567899999999766555677899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++|+|.+++.. ..+++..+..++.|++.||.|||++ |++||||||+|||++.++.+||+|||++...... .
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 999999999964 3599999999999999999999999 9999999999999999999999999998765433 3
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+|+.|+|||++.+..++.++|||||||++|+|+||+.||............... .......+...+..+.+++.
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH---CSCCCSCGGGSCHHHHHHHH
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---CCCCCCCccccCHHHHHHHH
Confidence 346899999999999999999999999999999999999988654322111110000 00111223456778999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||+.||.+|||+.+++++
T Consensus 252 ~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHSCSSTTTSCCHHHHTTC
T ss_pred HHccCChhHCcCHHHHhhC
Confidence 9999999999999999886
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=363.73 Aligned_cols=258 Identities=19% Similarity=0.293 Sum_probs=207.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
-.+.+|++++.||+|+||+||+|.. ++..||||++...... ....+.+|+.++++++||||+++++++.+.+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456788999999999999999987 5778999999765432 245689999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 132 AEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~--iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
|||+++|+|.+++..... ..+++..++.++.||+.||.|||+. + ++||||||+|||++.++.+||+|||+++....
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 999999999999975321 2389999999999999999999998 8 99999999999999999999999999875443
Q ss_pred C----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 209 G----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 209 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
. ....+|+.|+|||++.+..++.++|||||||++|+|+||+.||............. ........+...+..
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 267 (309)
T 3p86_A 192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG----FKCKRLEIPRNLNPQ 267 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH----HSCCCCCCCTTSCHH
T ss_pred cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hcCCCCCCCccCCHH
Confidence 2 34568999999999999999999999999999999999999887543322211110 011122344556788
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+.+|+.+||+.||.+|||+.++++.|+.+.+..
T Consensus 268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999988753
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-47 Score=367.54 Aligned_cols=273 Identities=29% Similarity=0.480 Sum_probs=225.0
Q ss_pred CcccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCccc
Q 011353 39 PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLAN 117 (488)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~ 117 (488)
.....|+..++...+++|. +.+.||+|+||.||+|...+++.||||++...... ....+.+|+.+++.++||||++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~---~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~ 91 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFS---NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 91 (326)
T ss_dssp CCCEECCTHHHHTTTTSSC---STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCC
T ss_pred CccceecHHHHHHHhhccc---cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccc
Confidence 3456788899887777665 55556999999999999878999999999765322 2336899999999999999999
Q ss_pred EEEEEeeCCeeEEEEecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCC--CcccccccCcceeeCCCC
Q 011353 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKE--RALYHDLNAYRIVFDDDV 193 (488)
Q Consensus 118 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~--~iiH~Dlkp~Nill~~~~ 193 (488)
+++++.+.+..++||||+++|+|.+++.... ..++++..+..++.|++.||.|||+.. |++||||||+|||++.++
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~ 171 (326)
T 3uim_A 92 LRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171 (326)
T ss_dssp CCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC
T ss_pred eEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC
Confidence 9999999999999999999999999997643 335999999999999999999999863 899999999999999999
Q ss_pred CeeeecCCCccccCCC-----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh---------H-
Q 011353 194 NPRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL---------D- 258 (488)
Q Consensus 194 ~~kl~DfGla~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~---------~- 258 (488)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|+||+.||..... +
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 251 (326)
T 3uim_A 172 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251 (326)
T ss_dssp CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHH
T ss_pred CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHH
Confidence 9999999999865432 223479999999999988899999999999999999999988853211 0
Q ss_pred ---HHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 259 ---LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 259 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
.........+.+.......+...+..+.+++..||+.||.+|||+.+++++|+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp HTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred HHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 01122233344444455667788899999999999999999999999999998643
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-46 Score=361.63 Aligned_cols=262 Identities=16% Similarity=0.187 Sum_probs=216.6
Q ss_pred cccCHHHHHHHhcCCCc-------ccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCC
Q 011353 42 CEYSIETLRTATSGFAM-------ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR 113 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~-------~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ 113 (488)
..++.+++..+++.... +.....||+|+||.||+|... +|+.||||++........+.+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34788998888876432 445567899999999999954 7999999999876666677899999999999999
Q ss_pred CcccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC
Q 011353 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193 (488)
Q Consensus 114 niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (488)
||+++++++...+..++||||+++++|.+++. ...+++..+..++.||+.||.|||+. |++||||||+|||++.++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC
Confidence 99999999999999999999999999999985 34699999999999999999999998 999999999999999999
Q ss_pred CeeeecCCCccccCCC----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccc
Q 011353 194 NPRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT 269 (488)
Q Consensus 194 ~~kl~DfGla~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 269 (488)
.+||+|||++...... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||............. ...
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~-~~~ 257 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR-DSP 257 (321)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-HSS
T ss_pred cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-cCC
Confidence 9999999998765432 34568999999999998889999999999999999999999886543221111110 001
Q ss_pred cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
.+. .......+..+.+++.+||+.||++|||+.+++++-
T Consensus 258 ~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 258 PPK--LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp CCC--CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred CCC--cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000 011234567899999999999999999999999873
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-47 Score=375.17 Aligned_cols=255 Identities=22% Similarity=0.285 Sum_probs=201.7
Q ss_pred CcccccccCCCCCCCeEEEEEeC----CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..|.+.+.||+|+||.||+|... ++..||||+++.... ...+.|.+|+.++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 45777888899999999999853 577899999986532 2355799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||+++|+|.+++... ...+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp EECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 9999999999999753 34699999999999999999999999 99999999999999999999999999998654331
Q ss_pred ------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 211 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||.............. ......+..++.
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~ 277 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-----GYRLPPPMDCPA 277 (373)
T ss_dssp -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT-----TEECCCCTTCBH
T ss_pred cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCccccH
Confidence 1223678999999999999999999999999999998 8888765432222211111 111122344667
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
.+.+++..||+.||.+|||+.++++.|+.+...+.
T Consensus 278 ~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 89999999999999999999999999999876543
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=353.99 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=213.8
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.++|++++.||+|+||.||+|...++..||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 35788899999999999999998788899999998654 34577999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----C
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~ 210 (488)
++++|.+++... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++..... .
T Consensus 88 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 88 EHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp TTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhC-CeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 999999999653 34699999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+|+.|+|||++.+..++.++||||||+++|+|+| |+.||............... .....+...+..+.+++
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li 240 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIM 240 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-----ccCCCCCcCCHHHHHHH
Confidence 3345678999999998999999999999999999999 88777654333222211111 11122334567899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
..||+.||.+|||+.+++++|+.+.+.
T Consensus 241 ~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 241 NHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 999999999999999999999988653
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=365.62 Aligned_cols=245 Identities=18% Similarity=0.226 Sum_probs=208.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCC---CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..+|++++.||+|+||.||+|.. .+++.||||+++.. .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 45788899999999999999994 56899999999643 223456789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC---
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 208 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~--- 208 (488)
|||++||+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.+|++||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999999965 34699999999999999999999999 999999999999999999999999999986432
Q ss_pred -CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 209 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 209 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...+.++.+
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~ 234 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHH
Confidence 23456899999999999989999999999999999999999998765433222211111 11234456788999
Q ss_pred HHHHhccCCCCCCC-----ChHHHHHH
Q 011353 288 LASRCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rp-----s~~~il~~ 309 (488)
|+.+||+.||.+|| ++.++++|
T Consensus 235 li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 99999999999999 89999887
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=369.90 Aligned_cols=253 Identities=19% Similarity=0.311 Sum_probs=210.1
Q ss_pred CcccccccCCCCCCCeEEEEEe--------CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 126 (488)
..|.+.+.||+|+||.||+|.. .++..||||+++..... ..+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 5678888999999999999984 23567999999865432 345799999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||++ ||+||||||+|||++.+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTEN 239 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTT
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchhhEEECCC
Confidence 9999999999999999997532 23589999999999999999999999 99999999999999999
Q ss_pred CCeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccc
Q 011353 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (488)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||...........
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~-- 317 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-- 317 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH--
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH--
Confidence 99999999999865432 22345678999999999999999999999999999999 8888765432222111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
+........+..++..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 318 ---~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 318 ---LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp ---HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111223344567789999999999999999999999999998764
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=355.96 Aligned_cols=258 Identities=17% Similarity=0.247 Sum_probs=210.0
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc---HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.+|++++.||+|+||.||+|. ..++..||||++....... .+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 468889999999999999999 4568999999986543322 456899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
||++|++|.+++.. .+++++..++.++.|++.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 91 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 91 EYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 99999999999975 34699999999999999999999999 9999999999999999999999999999865433
Q ss_pred --CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....+|+.|+|||++.+..++.++|||||||++|+|+||+.||................... .....+...+..+.+
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 246 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-VTTDVRKDIPQSLSN 246 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC-HHHHSCTTSCHHHHH
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC-cchhcccCCCHHHHH
Confidence 23457999999999999999999999999999999999999987654322221111111111 011122345678999
Q ss_pred HHHHhccCCCCCCC-ChHHHHHHHHhhhcCCC
Q 011353 288 LASRCLQYEPRERP-NPRSLVTALVTLQKDTE 318 (488)
Q Consensus 288 li~~cl~~~p~~Rp-s~~~il~~L~~~~~~~~ 318 (488)
++.+||+.||.+|| ++.++.+.|..+.....
T Consensus 247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 247 VILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp HHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred HHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 99999999999998 89999999998766543
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=363.59 Aligned_cols=255 Identities=20% Similarity=0.282 Sum_probs=210.7
Q ss_pred CcccccccCCCCCCCeEEEEEeC----CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..|++++.||+|+||.||+|... .+..||||+++..... ..+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56788899999999999999953 3456999999865332 355799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||+++|+|.+++... ...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 129 TEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp EECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred eeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 9999999999999653 34699999999999999999999999 99999999999999999999999999998764431
Q ss_pred ------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 211 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||............... .....+..++.
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 281 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-----YRLPAPMGCPH 281 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCH
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-----CCCCCCCCcCH
Confidence 1234668999999998889999999999999999999 88887654333222211111 11123445677
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
.+.+|+..||+.||.+|||+.++++.|+.+.+...
T Consensus 282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 89999999999999999999999999999987643
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=365.58 Aligned_cols=247 Identities=18% Similarity=0.189 Sum_probs=205.7
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.|++++.||+|+||.||+|.. .+|+.||||+++..... ..+.+.+|+.+|+.++||||+++++++.+.+..++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 578888999999999999994 56899999999754322 35679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC----CeeeecCCCcccc
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 206 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~DfGla~~~ 206 (488)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++ .+||+|||+++..
T Consensus 93 v~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 93 ILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp EEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 9999999999999964 45699999999999999999999998 999999999999998776 7999999999876
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+................. ........+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~ 247 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF--DEEFFSQTSE 247 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC--CHHHHTTSCH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC--CchhccCCCH
Confidence 543 34568999999999998899999999999999999999999987654332221111110000 0001123467
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+||.+||..||.+|||+.++++|
T Consensus 248 ~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 248 LAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 89999999999999999999999876
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=358.44 Aligned_cols=245 Identities=18% Similarity=0.212 Sum_probs=208.5
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..+|++++.||+|+||.||++.. .+|+.||||+++... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 46788999999999999999995 578999999996431 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-C
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~ 210 (488)
|||++||+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.+|++||+|||+++..... .
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 999999999999975 34699999999999999999999998 9999999999999999999999999999876543 3
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...+.++.+++.
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHH
Confidence 457899999999999989999999999999999999999998764332222111111 11234456678999999
Q ss_pred HhccCCCCCCC-----ChHHHHHH
Q 011353 291 RCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rp-----s~~~il~~ 309 (488)
+||+.||.+|| ++.++++|
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhccCHHHcCCCcCCCHHHHhcC
Confidence 99999999999 88888876
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=359.40 Aligned_cols=258 Identities=19% Similarity=0.298 Sum_probs=209.6
Q ss_pred CcccccccCCCCCCCeEEEEEe-----CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 129 (488)
..|++++.||+|+||+||+|.+ .+++.||||++........+.+.+|+.+++.++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5688899999999999999984 35889999999876555567799999999999999999999998653 5689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++|+|.+++... ...+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 90 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 999999999999999753 33599999999999999999999998 9999999999999999999999999999865432
Q ss_pred C-------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh---c--------cccccccc
Q 011353 210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---R--------NIQTLTDS 271 (488)
Q Consensus 210 ~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---~--------~~~~~~~~ 271 (488)
. ...++..|+|||++.+..++.++||||||+++|+|+||..|+.......... . ........
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 1 2345667999999999999999999999999999999998776543222110 0 00111111
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
......+..++..+.+++..||+.||++|||+.++++.|+.+.+.
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 112233455678899999999999999999999999999998765
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-46 Score=376.39 Aligned_cols=253 Identities=25% Similarity=0.352 Sum_probs=211.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCC-eeEEEEe
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLVAE 133 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~E 133 (488)
+...+++++.||+|+||.||+|... ++.||||+++... ..+.|.+|+.+|++++||||+++++++.+.. ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3467888899999999999999984 6799999998654 4577999999999999999999999987765 7899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-Ccc
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~ 212 (488)
|+++|+|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ...
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 99999999999865555589999999999999999999999 9999999999999999999999999999865433 233
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
.+++.|+|||++.+..++.++|||||||++|||+| |+.||+........... ........+..++..+.+||..
T Consensus 347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-----~~~~~~~~p~~~~~~l~~li~~ 421 (450)
T 1k9a_A 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----EKGYKMDAPDGCPPAVYDVMKN 421 (450)
T ss_dssp CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH-----HTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCcCCHHHHHHHHH
Confidence 56789999999999999999999999999999999 88887653221111111 1111223345567899999999
Q ss_pred hccCCCCCCCChHHHHHHHHhhhcC
Q 011353 292 CLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
||+.||.+|||+.++++.|+.+...
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999998754
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-46 Score=350.69 Aligned_cols=252 Identities=20% Similarity=0.318 Sum_probs=211.4
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.+|++++.||+|+||.||+|...++..||||+++... .....+.+|+.++..++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 4678889999999999999998888899999998654 345679999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----c
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-----~ 211 (488)
+++|.+++... ...+++..++.++.|++.||.|||+. |++||||||+||+++.++.+||+|||++....... .
T Consensus 87 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 87 NGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp TCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred CCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 99999999653 34599999999999999999999999 99999999999999999999999999998655432 2
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..+|+.|+|||++.+..++.++||||||+++|+|+| |+.||............... .....+...+..+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 239 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-----HRLYRPHLASDTIYQIMY 239 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC-----CCCCCCCcChHHHHHHHH
Confidence 334667999999998889999999999999999999 88777654322221111111 111123334678999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 291 RCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.||+.||.+|||+.+++++|+.+.+.
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 99999999999999999999998764
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=352.48 Aligned_cols=272 Identities=28% Similarity=0.470 Sum_probs=222.3
Q ss_pred cccccCHHHHHHHhcCCCcccc---cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCC----CccHHHHHHHHHHHhccCC
Q 011353 40 VFCEYSIETLRTATSGFAMENI---VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRN 112 (488)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~---i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h 112 (488)
.+..|++.++..++++|+...+ .+.||+|+||.||+|.. ++..||||++.... ....+.+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 4577899999999999986632 25679999999999987 57799999987532 1235679999999999999
Q ss_pred CCcccEEEEEeeCCeeEEEEecCCCCCHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC
Q 011353 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191 (488)
Q Consensus 113 ~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~ 191 (488)
|||+++++++.+.+..++||||+++++|.+++... ...++++..++.++.||+.||.|||+. |++||||||+||+++.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN-HHIHRDIKSANILLDE 168 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEcC
Confidence 99999999999999999999999999999999643 235699999999999999999999998 9999999999999999
Q ss_pred CCCeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH----Hh
Q 011353 192 DVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----IR 261 (488)
Q Consensus 192 ~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~ 261 (488)
++.+||+|||+++..... ....+|+.|+|||++.+ .++.++||||||+++|+|+||..||....... +.
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999998765432 23467899999998874 58899999999999999999998876432110 00
Q ss_pred h------ccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 262 D------RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 262 ~------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
. ..+...++.. ....+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHTTSCCHHHHSCSS-CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHhhhhhhhhhhhcccc-ccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 0 0111112211 123456778899999999999999999999999999998753
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-46 Score=351.30 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=210.1
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..+|++++.||+|+||+||++...++..||||+++... ...+.+.+|+.++..++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 35788899999999999999998888899999998654 34577999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----C
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~ 210 (488)
++++|.+++... ...+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++..... .
T Consensus 102 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 102 ANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp TTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 999999999652 34599999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+|+.|+|||++.+..++.++||||||+++|+|+| |+.||............... .....+...+..+.+++
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li 254 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTIM 254 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-----cCCCCCCcCCHHHHHHH
Confidence 3345678999999998899999999999999999998 88887654322222111111 11122333467899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.+||+.||.+|||+.+++++|+.+...
T Consensus 255 ~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 255 YSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 999999999999999999999988653
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-46 Score=360.26 Aligned_cols=252 Identities=16% Similarity=0.128 Sum_probs=207.0
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
..|++++.||+|+||.||+|. ..+++.||||++..... ...+.+|+.+++.+ +||||+++++++.+.+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 457888899999999999999 46789999999875432 34588999999999 899999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC-----eeeecCCCccccCCC
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-----PRLSCFGLMKNSRDG 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-----~kl~DfGla~~~~~~ 209 (488)
+ +++|.+++... .+.+++..++.++.||+.||.|||+. +++||||||+|||++.++. +||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 87 L-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 9 99999999753 45699999999999999999999999 9999999999999998887 999999999864322
Q ss_pred -----------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh----HHHh---hccccccccc
Q 011353 210 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIR---DRNIQTLTDS 271 (488)
Q Consensus 210 -----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~---~~~~~~~~~~ 271 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ..... ....
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~ 242 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA-TPIE 242 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH-SCHH
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc-CCHH
Confidence 245689999999999999999999999999999999999999875311 1111 00000 0000
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCCC
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 319 (488)
.. ....+ ++.+++..||+.||.+||++.+|++.|+.+......
T Consensus 243 ~~----~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 243 VL----CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp HH----TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HH----hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 00 11134 899999999999999999999999999988765443
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=368.03 Aligned_cols=256 Identities=21% Similarity=0.313 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
..|++++.||+|+||+||+|.+. ++..||||+++.... .....+.+|+.+++.++||||+++++++.+....+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 46788899999999999999842 467899999975432 23456899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC---CeeeecCC
Q 011353 130 LVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFG 201 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~DfG 201 (488)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++ .+||+|||
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEEecCCCCceEEECCCc
Confidence 9999999999999997532 23589999999999999999999999 999999999999998555 59999999
Q ss_pred Ccccc------CCCCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccccccccc
Q 011353 202 LMKNS------RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 202 la~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
+++.. .......+|+.|+|||++.+..++.++|||||||++|||+| |..||.............. ...
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~-----~~~ 304 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS-----GGR 304 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-----TCC
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCC
Confidence 98743 22234556889999999999999999999999999999998 8888765433322211111 111
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
...+..++..+.+|+.+||+.||.+|||+.+++++|+.+...+.
T Consensus 305 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 305 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 12334456789999999999999999999999999999887653
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=376.61 Aligned_cols=253 Identities=20% Similarity=0.303 Sum_probs=212.4
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
..+++.+.||+|+||.||+|...++..||||+++... ...+.|.+|+.+|+.++||||+++++++. .+..++||||++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 4567788899999999999998888899999998654 45778999999999999999999999986 667899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----Cc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~~ 211 (488)
+|+|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ..
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 99999999754334689999999999999999999999 9999999999999999999999999999876432 22
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..+++.|+|||++.+..++.++|||||||++|||+| |+.||.............. ......+..++..+.+||.
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~ 419 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-----GYRMPRPENCPEELYNIMM 419 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH-----TCCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHH
Confidence 345678999999998999999999999999999999 8888865433222211111 1111234456788999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 291 RCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+||+.||++|||+.+|++.|+.+....
T Consensus 420 ~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 420 RCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 999999999999999999999887543
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=367.12 Aligned_cols=246 Identities=18% Similarity=0.247 Sum_probs=204.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
+..+|++++.||+|+||.||+|.. .+++.||||+++... ......+.+|..++..+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 356788999999999999999994 568999999997431 12355688999999998 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++++||+|||+++.....
T Consensus 101 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 99999999999999975 34699999999999999999999999 9999999999999999999999999999864322
Q ss_pred ----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...+..+
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~ 251 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLHEDA 251 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHH
Confidence 3456899999999999888999999999999999999999998765443322222111 112344466789
Q ss_pred HHHHHHhccCCCCCCCCh------HHHHHH
Q 011353 286 VRLASRCLQYEPRERPNP------RSLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~------~~il~~ 309 (488)
.+++.+||+.||.+||++ .++++|
T Consensus 252 ~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 252 TGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 999999999999999998 778776
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=360.73 Aligned_cols=251 Identities=16% Similarity=0.157 Sum_probs=208.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+..|.+++.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 45788899999999999999994 568899999997543 3455688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC--CCCeeeecCCCccccCCCC--
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR-- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~--~~~~kl~DfGla~~~~~~~-- 210 (488)
++||+|.+++... ...+++..+..++.||+.||.|||+. |++||||||+|||++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 9999999999642 34699999999999999999999999 9999999999999987 7899999999998765543
Q ss_pred -ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+|+.|+|||++.+..++.++|||||||++|+|++|..||.................... .......+.++.+|+
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~s~~~~~li 238 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD--EEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC--HHHHTTSCHHHHHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCC--hhhhccCCHHHHHHH
Confidence 34578999999999988889999999999999999999999876543322221111111000 000113467899999
Q ss_pred HHhccCCCCCCCChHHHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.+||..||.+|||+.++++|-.
T Consensus 239 ~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 239 DRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHcCCChhHCcCHHHHhcChh
Confidence 9999999999999999999743
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=361.87 Aligned_cols=257 Identities=15% Similarity=0.210 Sum_probs=203.3
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe----eEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----RLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----~~lv 131 (488)
..+|++++.||+|+||+||+|... ++.||||++.... .....+.+|+.++.+++||||+++++++.+... .++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 357888999999999999999874 6899999997543 233456779999999999999999999987543 6999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC---------CcccccccCcceeeCCCCCeeeecCCC
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE---------RALYHDLNAYRIVFDDDVNPRLSCFGL 202 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---------~iiH~Dlkp~Nill~~~~~~kl~DfGl 202 (488)
|||+++|+|.+++.. ..+++..++.++.||+.||.|||+.. +++||||||+|||++.++.+||+|||+
T Consensus 101 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 999999999999964 45999999999999999999999852 899999999999999999999999999
Q ss_pred ccccCCC------CccccCCCCCCccccccC-----CCCCCccchhhHHHHHHHHhCCCCCCchhhH-------------
Q 011353 203 MKNSRDG------RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALD------------- 258 (488)
Q Consensus 203 a~~~~~~------~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~------------- 258 (488)
++..... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||......
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9764432 234679999999999863 3566889999999999999999887542110
Q ss_pred ---HHhhccccccccccccCC-CChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 259 ---LIRDRNIQTLTDSCLEGQ-FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 259 ---~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
.+..........+..... .....+..+.+|+.+||+.||++|||+.++++.|+.+.+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 000000000001110000 12245677999999999999999999999999999987643
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-46 Score=364.67 Aligned_cols=253 Identities=17% Similarity=0.118 Sum_probs=197.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
...+|++++.||+|+||+||++.. .+++.||||++..... ....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 456789999999999999999995 4789999999976543 34668899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC--eeeecCCCccccCC---
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNSRD--- 208 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--~kl~DfGla~~~~~--- 208 (488)
|+++|+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~-~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSM-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 9999999999965 34599999999999999999999998 9999999999999987765 99999999874332
Q ss_pred CCccccCCCCCCccccccCCCCCC-ccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 209 GRSYSTNLAFTPPEYLRTGRVTPE-SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 209 ~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
.....+|+.|+|||++.+..++.+ +|||||||++|+|++|+.||...............+.............+..+.+
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 253 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHH
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHH
Confidence 234568999999999988887665 8999999999999999998865321100000111111111110111134678999
Q ss_pred HHHHhccCCCCCCCChHHHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
|+.+||+.||.+|||+.++++|-.
T Consensus 254 li~~~L~~dP~~Rps~~ell~hp~ 277 (361)
T 3uc3_A 254 LISRIFVADPATRISIPEIKTHSW 277 (361)
T ss_dssp HHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred HHHHHccCChhHCcCHHHHHhCcc
Confidence 999999999999999999999843
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=379.93 Aligned_cols=253 Identities=21% Similarity=0.350 Sum_probs=213.8
Q ss_pred CcccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.++.+.+.||+|+||.||+|.+. ++..||||+++... ...+.|.+|+.+|++++||||+++++++.+.+..+|||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 45778889999999999999965 48899999998654 34678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~----- 210 (488)
++|+|.+++.......+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 999999999875566799999999999999999999999 99999999999999999999999999998764332
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+++.|+|||++.+..++.++|||||||++|||+| |..||.......... .+........+..++..+.+||
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li 452 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-----LLEKDYRMERPEGCPEKVYELM 452 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-----HHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHHH
Confidence 2234678999999998889999999999999999999 887776543221111 1111112233455678899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.+||+.||.+|||+.+|++.|+.+...
T Consensus 453 ~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 453 RACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999987644
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=358.61 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=208.5
Q ss_pred CcccccccCCCCCCCeEEEEEeC-CC-------CEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-NQ-------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
.+|.+++.||+|+||+||+|... ++ ..||+|++........+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 46778889999999999999843 33 47999999766555677899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC--------eeeecC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--------PRLSCF 200 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--------~kl~Df 200 (488)
++||||+++|+|.+++... ...+++..++.++.||+.||.|||++ +++||||||+|||++.++. +||+||
T Consensus 88 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEEN-TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhC-CeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 9999999999999999753 33489999999999999999999999 9999999999999988887 999999
Q ss_pred CCccccCCCCccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCCh
Q 011353 201 GLMKNSRDGRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (488)
Q Consensus 201 Gla~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
|++..........+|+.|+|||++.+ ..++.++|||||||++|+|+||..||............... ....+.
T Consensus 166 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~------~~~~~~ 239 (289)
T 4fvq_A 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED------RHQLPA 239 (289)
T ss_dssp CSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT------TCCCCC
T ss_pred cccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc------cCCCCC
Confidence 99987766556678899999999987 66899999999999999999977665543221111111000 111222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 280 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 280 ~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
..+..+.+++.+||+.||.+|||+.+++++|+.+.....
T Consensus 240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 234578999999999999999999999999998876543
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-47 Score=372.71 Aligned_cols=252 Identities=24% Similarity=0.347 Sum_probs=209.3
Q ss_pred CcccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.++.+.+.||+|+||.||+|... +++.||||+++..... ....|.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 46778889999999999999964 7899999999755322 234588999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
+++|+|.+++... ...+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++......
T Consensus 194 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 194 VQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 9999999999752 34589999999999999999999999 99999999999999999999999999998654321
Q ss_pred --ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 211 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
...+++.|+|||++.+..++.++|||||||++|||+| |..||............ ........+..++..+.+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~ 346 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV-----EKGGRLPCPELCPDAVFR 346 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHH-----HTTCCCCCCTTCCHHHHH
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCCCCHHHHH
Confidence 1224667999999998889999999999999999999 88777654332221111 111112234446678999
Q ss_pred HHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 288 LASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
||.+||+.||++|||+.++++.|+.+.+
T Consensus 347 li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 347 LMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999998865
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=357.09 Aligned_cols=247 Identities=17% Similarity=0.161 Sum_probs=204.9
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.|++.+.||+|+||.||+|.. .++..||||+++..... ....+.+|+.+++.++||||+++++++.+....++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 477888899999999999995 56899999999754321 35679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC----CeeeecCCCcccc
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 206 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~DfGla~~~ 206 (488)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +++||||||+|||++.++ .+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 92 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp EEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHC-CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 9999999999999964 45699999999999999999999998 999999999999998877 7999999999876
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||................. ..........+.
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 246 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSA 246 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC--CCCHHHHTTSCH
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC--CcCccccccCCH
Confidence 433 345689999999999988999999999999999999999998875433222111100000 000001123457
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+|+.+||+.||.+|||+.++++|
T Consensus 247 ~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 247 LAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcC
Confidence 89999999999999999999999987
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-46 Score=364.57 Aligned_cols=249 Identities=16% Similarity=0.217 Sum_probs=205.1
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
++.+|++++.||+|+||.||++.. .+++.||||++.... ....+.+.+|+.+|+.++|||||++++++.+.+..++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 467889999999999999999994 568899999986431 2345678999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||+.||+|.+++.. ...+++..+..++.||+.||.|||+. ||+||||||+|||++.+|.+||+|||+++.....
T Consensus 93 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999999975 45699999999999999999999999 9999999999999999999999999999875443
Q ss_pred --CccccCCCCCCcccccc---CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... ....+. .....++...+..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~-~~~~~~--~~~~~~p~~~s~~ 246 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE-IVHTFE--TTVVTYPSAWSQE 246 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH-HHHHHH--HCCCCCCTTSCHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH-HHHHHh--hcccCCCCcCCHH
Confidence 34578999999999974 458999999999999999999999986421110000 000000 0112234456788
Q ss_pred HHHHHHHhccCCCCCCCC-hHHHHHH
Q 011353 285 LVRLASRCLQYEPRERPN-PRSLVTA 309 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps-~~~il~~ 309 (488)
+.+|+.+||+.||.+||+ +.+++++
T Consensus 247 ~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 247 MVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 999999999999999998 6776654
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=348.06 Aligned_cols=254 Identities=20% Similarity=0.309 Sum_probs=210.9
Q ss_pred CCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 130 (488)
.+++|++++.||+|+||+||+|... +..||||+++..... ..+.+.+|+.+++.++||||+++++++.+. +..++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 4567889999999999999999984 778999999865422 345699999999999999999999999887 77899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
||||+++|+|.+++.......+++..++.++.||+.||.|||+. + ++||||||+||+++.++.++|+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999999875555699999999999999999999998 8 99999999999999999999998888654332
Q ss_pred CCccccCCCCCCccccccCCCCC---CccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 209 GRSYSTNLAFTPPEYLRTGRVTP---ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 209 ~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
....+|+.|+|||++.+...+. ++|||||||++|||+||+.||............. ........+...+..+
T Consensus 166 -~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 240 (271)
T 3kmu_A 166 -PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVA----LEGLRPTIPPGISPHV 240 (271)
T ss_dssp -TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHH----HSCCCCCCCTTCCHHH
T ss_pred -cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHH----hcCCCCCCCCCCCHHH
Confidence 3456789999999998765544 7999999999999999999887543322211111 1111223344567789
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.+++..||+.||.+|||+.++++.|+.+.+
T Consensus 241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 999999999999999999999999998864
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=355.53 Aligned_cols=251 Identities=19% Similarity=0.216 Sum_probs=200.9
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
..+|++++.||+|+||+||+|...+++.||||++...... ....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 4688999999999999999999888999999999754322 24578999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++ +|.+++... ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 100 FMEK-DLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp CCSE-EHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CCCC-CHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 9985 788888653 34599999999999999999999999 9999999999999999999999999999865432
Q ss_pred CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc--------ccccc-----------
Q 011353 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------IQTLT----------- 269 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--------~~~~~----------- 269 (488)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||............ ...+.
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 33467899999999986 45899999999999999999999988653221110000 00000
Q ss_pred -----cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 -----DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 -----~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
............+.++.+|+.+||+.||.+|||+.++++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000000112245689999999999999999999999986
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-46 Score=360.94 Aligned_cols=246 Identities=17% Similarity=0.173 Sum_probs=209.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
...+|++++.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 356788999999999999999995 568999999986432 2345678999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.....
T Consensus 119 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999999975 34599999999999999999999998 9999999999999999999999999999876544
Q ss_pred CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+..+.+++
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 269 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLL 269 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHH
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHH
Confidence 3457899999999999989999999999999999999999998765332222111111 1123445678899999
Q ss_pred HHhccCCCCCCCC-----hHHHHHH
Q 011353 290 SRCLQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps-----~~~il~~ 309 (488)
.+||+.||.+||+ +.++++|
T Consensus 270 ~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 270 RNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHhhcCHHhccCCccCCHHHHHhC
Confidence 9999999999998 8888876
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-46 Score=366.11 Aligned_cols=250 Identities=16% Similarity=0.223 Sum_probs=203.0
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
+..+|++++.||+|+||.||+|.. .+++.||||+++.... .....+.+|..++.++ +||||+++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 456788999999999999999995 5688999999975422 2234578899999887 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC-
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~- 208 (488)
+||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++++||+|||+++....
T Consensus 130 lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999975 34699999999999999999999999 999999999999999999999999999986322
Q ss_pred ---CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc-----cccccccccccCCCChH
Q 011353 209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----NIQTLTDSCLEGQFSSD 280 (488)
Q Consensus 209 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 280 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........... ....+.. ....++..
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~ 284 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRS 284 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTT
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCc
Confidence 2345789999999999999999999999999999999999999853211000000 0000111 11234455
Q ss_pred HHHHHHHHHHHhccCCCCCCCCh------HHHHHH
Q 011353 281 EGTELVRLASRCLQYEPRERPNP------RSLVTA 309 (488)
Q Consensus 281 ~~~~l~~li~~cl~~~p~~Rps~------~~il~~ 309 (488)
.+.++.+||.+||+.||.+||++ .++++|
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 67889999999999999999996 566655
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=368.64 Aligned_cols=248 Identities=17% Similarity=0.168 Sum_probs=205.5
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
..|++++.||+|+||+||+|. ..+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 367888999999999999998 467899999999765432 34568999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC---CCCCeeeecCCCccccCCC-
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~DfGla~~~~~~- 209 (488)
|++||+|.+.+.. ...+++..+..++.||+.||.|||++ ||+||||||+|||++ .++.+||+|||++......
T Consensus 91 ~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~-givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~ 167 (444)
T 3soa_A 91 LVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167 (444)
T ss_dssp CCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred eCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence 9999999999975 35699999999999999999999999 999999999999998 5688999999999876543
Q ss_pred ---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.................+. ........++++.
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~ 245 (444)
T 3soa_A 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF--PSPEWDTVTPEAK 245 (444)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC--CTTTTTTSCHHHH
T ss_pred ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCC--CccccccCCHHHH
Confidence 23568999999999998899999999999999999999999987654333222211111110 0111123567899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+|+.+||+.||.+|||+.++++|
T Consensus 246 ~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 246 DLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHcCCChhHCCCHHHHhcC
Confidence 99999999999999999999997
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=347.33 Aligned_cols=250 Identities=20% Similarity=0.261 Sum_probs=198.8
Q ss_pred CCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc----cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
++.+|++.+.||+|+||.||+|... +..||||+++..... ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 4677888999999999999999974 779999998754322 24678999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC---cccccccCcceeeCC--------CCCeeeec
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER---ALYHDLNAYRIVFDD--------DVNPRLSC 199 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~---iiH~Dlkp~Nill~~--------~~~~kl~D 199 (488)
||||+++++|.+++. .+.+++..++.++.|++.||.|||++ + ++||||||+|||++. ++.+||+|
T Consensus 84 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~-~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDE-AIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHS-SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999994 45699999999999999999999998 7 899999999999985 77899999
Q ss_pred CCCccccCCC--CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCC
Q 011353 200 FGLMKNSRDG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (488)
Q Consensus 200 fGla~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
||++...... ....+|+.|+|||.+.+..++.++||||||+++|+|+||+.||.............. .......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~ 235 (271)
T 3dtc_A 160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM----NKLALPI 235 (271)
T ss_dssp CCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT----SCCCCCC
T ss_pred CCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc----CCCCCCC
Confidence 9999765433 245678999999999988999999999999999999999998875432222111111 1111223
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
+...+..+.+++.+||+.||.+|||+.+++++|+.+
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 236 PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 445667899999999999999999999999999864
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=350.96 Aligned_cols=246 Identities=15% Similarity=0.170 Sum_probs=198.5
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--------------------------cHHHHHHHHHHHh
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--------------------------DARQFLEEARAVG 108 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~ 108 (488)
+..|++++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46788999999999999999994 56889999999654311 1246889999999
Q ss_pred ccCCCCcccEEEEEee--CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcc
Q 011353 109 QLRNRRLANLLGCCCE--GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186 (488)
Q Consensus 109 ~l~h~niv~l~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~N 186 (488)
.++||||+++++++.+ .+..++||||+++++|.+++. ...+++..+..++.||+.||.|||+. +++||||||+|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~N 167 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSN 167 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHH
Confidence 9999999999999987 567899999999999998763 45699999999999999999999999 99999999999
Q ss_pred eeeCCCCCeeeecCCCccccCCC----CccccCCCCCCccccccCC---CCCCccchhhHHHHHHHHhCCCCCCchhhHH
Q 011353 187 IVFDDDVNPRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDL 259 (488)
Q Consensus 187 ill~~~~~~kl~DfGla~~~~~~----~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 259 (488)
||++.++.+||+|||+++..... ....+|+.|+|||++.+.. .+.++|||||||++|+|++|+.||.......
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 99999999999999999875543 3456899999999998755 3678999999999999999999987653322
Q ss_pred HhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
........... .......+..+.+++.+||+.||++|||+.++++|
T Consensus 248 ~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 248 LHSKIKSQALE----FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HHHHHHHCCCC----CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HHHHHhcccCC----CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 22111111110 01112356789999999999999999999999876
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=372.54 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=208.2
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
..+++.+.||+|+||.||+|...++..||||+++... ...+.|.+|+.+|++++||||+++++++.+ +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 4567788899999999999998887889999998654 346789999999999999999999999876 67899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----Cc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~~ 211 (488)
+|+|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ..
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 99999999754345699999999999999999999999 9999999999999999999999999999865432 12
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..+++.|+|||++.+..++.++|||||||++|||+| |+.||.............. ......+..++..+.+||.
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~ 415 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-----GYRMPCPPECPESLHDLMC 415 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHH
Confidence 335678999999999999999999999999999999 8888765432222211111 1112234456788999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 291 RCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+||+.||++|||+.++++.|+.+....
T Consensus 416 ~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 416 QCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHccCChhhCcCHHHHHHHHHHHhccC
Confidence 999999999999999999999887554
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=361.65 Aligned_cols=253 Identities=17% Similarity=0.260 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCE----EEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFR----IAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.+|++++.||+|+||+||+|.. .++.. ||+|.+.... ......+.+|+.+++.++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 5688889999999999999994 44543 8888886443 223456788999999999999999999986 466899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||+++|+|.+++... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH-GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT-TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC-CCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 99999999999999753 34689999999999999999999999 9999999999999999999999999999875433
Q ss_pred -----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....+++.|+|||++.+..++.++|||||||++|+|+| |..||............ ........+...+.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 244 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL-----EKGERLAQPQICTI 244 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHH-----HTTCBCCCCTTBCT
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHH-----HcCCCCCCCCcCcH
Confidence 23346779999999999999999999999999999999 99888654322111111 11111122333456
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
.+.+++.+||+.||.+|||+.+++++|+.+.+.+
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999987654
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=359.35 Aligned_cols=259 Identities=22% Similarity=0.294 Sum_probs=212.7
Q ss_pred hcCCCcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeC
Q 011353 53 TSGFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG 125 (488)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 125 (488)
......|++++.||+|+||.||+|... +++.||||+++..... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 334567888899999999999999953 3478999999865433 245699999999999999999999999999
Q ss_pred CeeEEEEecCCCCCHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCccccccc
Q 011353 126 DERLLVAEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183 (488)
Q Consensus 126 ~~~~lv~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlk 183 (488)
+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||++ +++|||||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlk 201 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDLA 201 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCS
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCC
Confidence 99999999999999999997532 15699999999999999999999999 99999999
Q ss_pred CcceeeCCCCCeeeecCCCccccCC------CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchh
Q 011353 184 AYRIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHA 256 (488)
Q Consensus 184 p~Nill~~~~~~kl~DfGla~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~ 256 (488)
|+|||++.++.+||+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|+|+| |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999875432 223456788999999998899999999999999999999 888886543
Q ss_pred hHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 257 LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
........... .....+...+..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 282 ~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 282 HEEVIYYVRDG-----NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred hHHHHHHHhCC-----CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 32222111111 111233456678999999999999999999999999999987654
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=362.96 Aligned_cols=255 Identities=22% Similarity=0.293 Sum_probs=211.9
Q ss_pred CcccccccCCCCCCCeEEEEEeC--------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 126 (488)
..|.+.+.||+|+||+||+|... .+..||||+++..... ....+.+|+.+++.+ +||||+++++++.+.+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 46788889999999999999842 2357999999865432 346789999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. +|+||||||+|||++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCcceEEEcCC
Confidence 9999999999999999997543 23599999999999999999999999 99999999999999999
Q ss_pred CCeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccc
Q 011353 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (488)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|+| |..||.............
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~ 307 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99999999999865432 22345788999999999999999999999999999999 888876543332221111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
. ......+...+.++.+|+.+||+.||++|||+.+++++|+.+....
T Consensus 308 ~-----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 308 E-----GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp T-----TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred c-----CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 1 1112233446678999999999999999999999999999987644
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-46 Score=360.98 Aligned_cols=246 Identities=17% Similarity=0.217 Sum_probs=205.8
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
...+|.+++.||+|+||.||+|.. .+++.||||+++... ......+..|..++..+ +||||+++++++.+.+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 356788889999999999999995 568999999997531 23456688899999987 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC-
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~- 208 (488)
+||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.+|++||+|||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999999975 34699999999999999999999999 999999999999999999999999999986432
Q ss_pred ---CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 209 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+.++
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~ 245 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEA 245 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CCCCCcccCHHH
Confidence 23456899999999999989999999999999999999999998765433222111111 112344467889
Q ss_pred HHHHHHhccCCCCCCCChH-HHHHH
Q 011353 286 VRLASRCLQYEPRERPNPR-SLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~-~il~~ 309 (488)
.+++.+||..||.+||++. ++++|
T Consensus 246 ~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 246 KDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHHHHhcCCHhHcCCChHHHHcC
Confidence 9999999999999999997 66554
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=350.09 Aligned_cols=250 Identities=18% Similarity=0.206 Sum_probs=200.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.+|++++.||+|+||+||+|.. .+++.||||+++..... ....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5788999999999999999995 56899999999754332 24678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++ +|.+.+.. ..+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~-~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9976 56666654 245699999999999999999999999 9999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchh-hHHHhhcc--------------cccccc---
Q 011353 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRN--------------IQTLTD--- 270 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~--------------~~~~~~--- 270 (488)
....+|+.|+|||++.+.. ++.++|||||||++|+|+||..||.... ........ .....+
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 3446789999999998766 7999999999999999999988864321 11110000 000000
Q ss_pred ------ccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 ------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 ------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...........+..+.+|+.+||+.||++|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000011223456789999999999999999999999986
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-45 Score=349.01 Aligned_cols=255 Identities=18% Similarity=0.268 Sum_probs=201.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
++.+|++.+.||+|+||+||++... ++.||||++... ...+.+.+|+.++++++||||+++++++.+ ..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 4567888899999999999999974 678999999753 245679999999999999999999998863 47999999
Q ss_pred CCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhc---CCCcccccccCcceeeCCCCC-eeeecCCCccccCCC
Q 011353 135 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTS---KERALYHDLNAYRIVFDDDVN-PRLSCFGLMKNSRDG 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~~iiH~Dlkp~Nill~~~~~-~kl~DfGla~~~~~~ 209 (488)
+++|+|.+++..... ..+++..++.++.|++.||.|||+ + +++||||||+|||++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSS-CCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCC-CeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999975332 247899999999999999999999 6 8999999999999998887 799999998765433
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
....+|+.|+|||++.+..++.++|||||||++|||+||+.||............ ..........+...+..+.++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l 236 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW---AVHNGTRPPLIKNLPKPIESL 236 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH---HHHTTCCCCCBTTCCHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH---HHhcCCCCCcccccCHHHHHH
Confidence 3446899999999999989999999999999999999999888642111100000 000001112233456789999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 289 ASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
+.+||+.||.+|||+.++++.|+.+.+...
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999876543
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-45 Score=346.64 Aligned_cols=251 Identities=22% Similarity=0.362 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc-------HHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-------ARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
.+|++++.||+|+||+||+|.. .+++.||||++....... .+.+.+|+.+++.++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5788889999999999999995 578999999997543322 157899999999999999999999997655
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccCcceeeCCCCC-----eeeecCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVN-----PRLSCFG 201 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--iiH~Dlkp~Nill~~~~~-----~kl~DfG 201 (488)
++||||+++|+|.+++... ...+++..++.++.|++.||.|||+. + ++||||||+|||++.++. +||+|||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 7999999999999988653 45699999999999999999999998 8 999999999999987776 9999999
Q ss_pred CccccCCC-CccccCCCCCCccccc--cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC
Q 011353 202 LMKNSRDG-RSYSTNLAFTPPEYLR--TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 202 la~~~~~~-~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
+++..... ....+|+.|+|||++. ...++.++|||||||++|+|++|+.||.......... .............+
T Consensus 175 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~ 252 (287)
T 4f0f_A 175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTIP 252 (287)
T ss_dssp TCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCCC
T ss_pred ccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCCC
Confidence 99865443 3456899999999984 3457889999999999999999999886432111100 00011111222344
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
...+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 253 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 253 EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 55678899999999999999999999999999864
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=359.72 Aligned_cols=248 Identities=18% Similarity=0.205 Sum_probs=205.4
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.|++++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~ 109 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 578888899999999999995 56899999999765332 345689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC---CCeeeecCCCccccCCCC-
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~DfGla~~~~~~~- 210 (488)
+++|+|.+++.. ...+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.+||+|||++.......
T Consensus 110 ~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 110 VTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 999999999964 45699999999999999999999999 99999999999999765 459999999998765432
Q ss_pred --ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 211 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
...||+.|+|||++.+..++.++|||||||++|+|++|..||................... ........+.++.+|
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~l 264 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY--PSPEWDTVTPEAKSL 264 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CTTGGGGSCHHHHHH
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC--CcccccCCCHHHHHH
Confidence 3568999999999998899999999999999999999999987653322221111111100 001112356789999
Q ss_pred HHHhccCCCCCCCChHHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L 310 (488)
+.+||+.||.+|||+.+++++-
T Consensus 265 i~~~L~~dP~~R~t~~e~l~hp 286 (362)
T 2bdw_A 265 IDSMLTVNPKKRITADQALKVP 286 (362)
T ss_dssp HHHHSCSSGGGSCCHHHHTTSH
T ss_pred HHHHcCCChhhCcCHHHHhcCc
Confidence 9999999999999999999873
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=364.18 Aligned_cols=249 Identities=19% Similarity=0.141 Sum_probs=207.3
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..|++++.||+|+||.||+|.. .+++.||+|++..........+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 4688889999999999999994 568999999998665445567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC--CCCCeeeecCCCccccCCCC---
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~DfGla~~~~~~~--- 210 (488)
++|+|.+++... ...+++..+..++.||+.||.|||+. ||+||||||+|||++ .++.+||+|||+++......
T Consensus 131 ~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 208 (387)
T 1kob_A 131 SGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208 (387)
T ss_dssp CCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred CCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence 999999999652 34699999999999999999999999 999999999999997 45789999999998765442
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+|+.|+|||++.+..++.++|||||||++|+|+||..||................. ..........+.++.+|+.
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~ 286 (387)
T 1kob_A 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW--EFDEDAFSSVSPEAKDFIK 286 (387)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC--CCCSSTTTTSCHHHHHHHH
T ss_pred eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCccccccCCHHHHHHHH
Confidence 34689999999999988899999999999999999999998876432221111110000 0111122345678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||+.||.+|||+.+++++
T Consensus 287 ~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 287 NLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTSCSSGGGSCCHHHHHTS
T ss_pred HHcCCChhHCcCHHHHhhC
Confidence 9999999999999999986
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=350.97 Aligned_cols=249 Identities=17% Similarity=0.222 Sum_probs=197.4
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhc--cCCCCcccEEEEEeeC----CeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEG----DERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~~~~l 130 (488)
.+|++++.||+|+||+||+|.. +++.||||++... ....+.+|.+++.. ++||||+++++++.+. ...++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 4678888999999999999988 6789999998643 34566777777776 7899999999997553 45899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCcccccccCcceeeCCCCCeeeecCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT--------SKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~DfGl 202 (488)
||||+++|+|.+++. ...+++..++.++.||+.||.||| +. +++||||||+|||++.++.+||+|||+
T Consensus 84 v~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC-EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999999994 356999999999999999999999 87 999999999999999999999999999
Q ss_pred ccccCCC--------CccccCCCCCCccccccC------CCCCCccchhhHHHHHHHHhC----------CCCCCchh--
Q 011353 203 MKNSRDG--------RSYSTNLAFTPPEYLRTG------RVTPESVMYSFGTLLLDLLSG----------KHIPPSHA-- 256 (488)
Q Consensus 203 a~~~~~~--------~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg----------~~p~~~~~-- 256 (488)
++..... ....+|+.|+|||++.+. .++.++|||||||++|||+|| +.||....
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8754332 223689999999999876 345689999999999999999 66664321
Q ss_pred ---hHHHhhccc-cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 257 ---LDLIRDRNI-QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 257 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
......... ............+...+..+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 111111000 000001111112234778999999999999999999999999999876
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=361.03 Aligned_cols=247 Identities=19% Similarity=0.221 Sum_probs=206.6
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.+..|.+++.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 356889999999999999999994 678999999986421 1224578999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||+ +|+|.+++.. .+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99999 6799998865 34699999999999999999999999 9999999999999999999999999999876543
Q ss_pred --CccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......... .+. . .....+...++.+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----~i~-~-~~~~~p~~~s~~~~ 236 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----KVN-S-CVYVMPDFLSPGAQ 236 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----CCC-S-SCCCCCTTSCHHHH
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----HHH-c-CCCCCcccCCHHHH
Confidence 34568999999999987775 689999999999999999999886543221111 111 0 01123445678899
Q ss_pred HHHHHhccCCCCCCCChHHHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
+|+.+||+.||.+|||+.+++++-.
T Consensus 237 ~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 237 SLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp HHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred HHHHHHcCCChhHCcCHHHHHhChh
Confidence 9999999999999999999998743
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=352.28 Aligned_cols=258 Identities=14% Similarity=0.136 Sum_probs=208.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCC--eeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 132 (488)
..|.+++.||+|+||+||+|.. .+++.||||+++... ....+.+.+|+.+++.++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 4678889999999999999995 458999999997543 234567889999999999999999999998765 789999
Q ss_pred ecCCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee----CCCCCeeeecCCCccccC
Q 011353 133 EYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~DfGla~~~~ 207 (488)
||+++++|.+++..... ..+++..++.++.||+.||.|||+. +++||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 99999999999975322 3499999999999999999999999 99999999999999 788889999999998765
Q ss_pred CC---CccccCCCCCCccccc--------cCCCCCCccchhhHHHHHHHHhCCCCCCchh-----hH---HHhhcccccc
Q 011353 208 DG---RSYSTNLAFTPPEYLR--------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-----LD---LIRDRNIQTL 268 (488)
Q Consensus 208 ~~---~~~~~~~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-----~~---~~~~~~~~~~ 268 (488)
.. ....+|+.|+|||++. +..++.++|||||||++|||+||+.||.... .. .+........
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTC
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCccc
Confidence 44 2346789999999986 4678999999999999999999998875211 11 1111111000
Q ss_pred c---------------cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 269 T---------------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 269 ~---------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
+ ............+..+.+++.+||+.||++|||+.+++++......
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 0 0011123456788899999999999999999999999999876543
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=364.60 Aligned_cols=258 Identities=15% Similarity=0.156 Sum_probs=205.1
Q ss_pred CCcccccccCCCC--CCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 56 FAMENIVSEHGEK--APNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 56 ~~~~~~i~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
-.+|++++.||+| +||+||+|.. .+++.||||+++..... ....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578899999999 9999999995 47899999999754322 24568889999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~-- 208 (488)
||||+++|+|.+++.......+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 99999999999999875556799999999999999999999999 999999999999999999999999998754311
Q ss_pred ---------CCccccCCCCCCcccccc--CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc----ccccccc--
Q 011353 209 ---------GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN----IQTLTDS-- 271 (488)
Q Consensus 209 ---------~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~----~~~~~~~-- 271 (488)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||............ ...+.+.
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 262 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccc
Confidence 123467889999999987 56899999999999999999999988653211111000 0000000
Q ss_pred ----------------------------------cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhhh
Q 011353 272 ----------------------------------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ 314 (488)
Q Consensus 272 ----------------------------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~ 314 (488)
......+...+..+.+|+.+||+.||.+|||+.++++| ++.+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 00001223456789999999999999999999999987 55444
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=343.93 Aligned_cols=252 Identities=21% Similarity=0.308 Sum_probs=212.5
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.+.|++++.||+|+||.||++...++..||||++..... ..+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 457888899999999999999987888999999986543 4567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----C
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~ 210 (488)
++++|.+++... ...+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++...... .
T Consensus 86 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 86 EHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 999999999753 34689999999999999999999999 9999999999999999999999999998865432 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+++.|+|||++.+..++.++||||||+++|+|++ |+.||............... .....+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li 238 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIM 238 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-----CcCCCCccCcHHHHHHH
Confidence 3345678999999998899999999999999999999 78777654322221111111 11122334567899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.+||+.||.+|||+.+++++|+.+.+
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 239 NHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998865
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-46 Score=359.59 Aligned_cols=253 Identities=18% Similarity=0.269 Sum_probs=203.1
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCC----EEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.+|++++.||+|+||+||+|.. .+++ .||+|.++... ....+.+.+|+.++++++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 4678888999999999999994 3443 46889886543 234677999999999999999999999998754 789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
|+||+++|+|.+++... ...+++..++.|+.||+.||.|||+. +++||||||+|||++.++.+||+|||+++......
T Consensus 94 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 99999999999999763 35699999999999999999999999 99999999999999999999999999988654322
Q ss_pred ------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 211 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||.......... .+........+...+.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 246 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-----ILEKGERLPQPPICTI 246 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-----HHHTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH-----HHHcCCCCCCCccCCH
Confidence 2345778999999999999999999999999999999 888876543222111 1111112223445667
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
.+.+++.+||+.||.+|||+.+++++|+.+...+
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 8999999999999999999999999999987653
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-46 Score=359.80 Aligned_cols=260 Identities=21% Similarity=0.268 Sum_probs=211.4
Q ss_pred CcccccccCCCCCCCeEEEEEe-----CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEe--eCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC--EGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~ 129 (488)
..|++++.||+|+||.||+|.+ .+++.||||++........+.+.+|+.+++.++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4678889999999999999984 457899999998766555667999999999999999999999986 456689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++++|.+++... ...+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 103 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 999999999999999653 23599999999999999999999998 9999999999999999999999999999865433
Q ss_pred C-------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc----------ccccccccc
Q 011353 210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR----------NIQTLTDSC 272 (488)
Q Consensus 210 ~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~----------~~~~~~~~~ 272 (488)
. ...+|+.|+|||++.+..++.++|||||||++|+|++|+.||........... .........
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 2 23467789999999988899999999999999999999988765433322111 011111111
Q ss_pred ccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
.....+...+..+.+|+..||+.||.+|||+.+++++|+.+.....
T Consensus 261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 2223445567889999999999999999999999999999876543
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-45 Score=349.00 Aligned_cols=250 Identities=17% Similarity=0.229 Sum_probs=200.9
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.+|++++.||+|+||+||+|...+++.||||++...... ....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 568889999999999999999878999999999754322 246788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++ +|.+++... .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp CSE-EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 976 899988653 35699999999999999999999999 9999999999999999999999999998765432 3
Q ss_pred ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc-----------ccc---c--cc--
Q 011353 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-----------QTL---T--DS-- 271 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-----------~~~---~--~~-- 271 (488)
...+|+.|+|||++.+. .++.++|||||||++|+|+||+.||............. ... . +.
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 34678999999999764 58999999999999999999998887542211110000 000 0 00
Q ss_pred -----cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 -----CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 -----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..........+.++.+|+.+||+.||++|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00001122356789999999999999999999999876
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=357.26 Aligned_cols=248 Identities=17% Similarity=0.136 Sum_probs=201.6
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+.+|++++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 46788999999999999999995 47899999998654322 24568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++|+|.+++.. ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 9999999999964 44699999999999999999999998 9999999999999999999999999999754321
Q ss_pred --CccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||............ ..............+..+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHH---HHTTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---HhcccccCCccccCCHHHH
Confidence 34568999999999987765 77899999999999999999988643221000000 0000000011234567899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+|+.+||+.||.+|||+.+++++
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHccCChhhCcCHHHHhhC
Confidence 99999999999999999999887
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=359.33 Aligned_cols=246 Identities=19% Similarity=0.238 Sum_probs=206.0
Q ss_pred CCCcccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCC---CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
...+|++++.||+|+||.||+|... +++.||||+++... ......+.+|..++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3567889999999999999999954 58899999997531 23456788999999988 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC-
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~- 208 (488)
+||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.+|++||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999999975 34599999999999999999999999 999999999999999999999999999986322
Q ss_pred ---CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 209 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...+.++
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~ 248 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEA 248 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHH
Confidence 23456899999999999999999999999999999999999998765433222211111 112344567889
Q ss_pred HHHHHHhccCCCCCCCC-----hHHHHHH
Q 011353 286 VRLASRCLQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps-----~~~il~~ 309 (488)
.+|+.+||+.||.+||+ +.++++|
T Consensus 249 ~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 249 VAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 99999999999999996 4677665
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=362.34 Aligned_cols=248 Identities=19% Similarity=0.152 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.+...+.||+|+||.||+|.. .+|+.||||+++.......+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 90 ~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 333456689999999999994 5789999999987655556789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee--CCCCCeeeecCCCccccCCC---Cc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF--DDDVNPRLSCFGLMKNSRDG---RS 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill--~~~~~~kl~DfGla~~~~~~---~~ 211 (488)
+++|.+++... ...+++..++.++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||+++..... ..
T Consensus 170 ~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~ 247 (373)
T 2x4f_A 170 GGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247 (373)
T ss_dssp TCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence 99999988652 34599999999999999999999999 99999999999999 66789999999999876543 23
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..+|+.|+|||++.+..++.++|||||||++|||+||+.||.................. .........+.++.+|+.+
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~ 325 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKEFISK 325 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHHHHHT
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHHHHHH
Confidence 45899999999999888999999999999999999999998765332221111111000 0001112346789999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||+.||.+|||+.+++++
T Consensus 326 ~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 326 LLIKEKSWRISASEALKH 343 (373)
T ss_dssp TSCSSGGGSCCHHHHHHS
T ss_pred HcCCChhhCCCHHHHhcC
Confidence 999999999999999986
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-46 Score=364.51 Aligned_cols=255 Identities=20% Similarity=0.282 Sum_probs=207.0
Q ss_pred CCcccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 127 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 127 (488)
..+|++++.||+|+||.||+|.+ .+++.||||+++..... ..+.+.+|+.++..+ +||||+++++++.+.+.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 35678888899999999999973 24578999999865432 345699999999999 79999999999987654
Q ss_pred -eEEEEecCCCCCHHhhhccCCC---------------------------------------------------------
Q 011353 128 -RLLVAEYMPNDTLAKHLFHWET--------------------------------------------------------- 149 (488)
Q Consensus 128 -~~lv~E~~~~gsL~~~l~~~~~--------------------------------------------------------- 149 (488)
.++||||+++|+|.+++.....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 8999999999999999975322
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC------CccccCC
Q 011353 150 -------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNL 216 (488)
Q Consensus 150 -------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~------~~~~~~~ 216 (488)
..+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ....+|+
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~ 259 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECG
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCc
Confidence 1289999999999999999999999 9999999999999999999999999999865332 2234678
Q ss_pred CCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccC
Q 011353 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (488)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (488)
.|+|||++.+..++.++|||||||++|||+| |..||............. ........+...++.+.+++..||+.
T Consensus 260 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~ 335 (359)
T 3vhe_A 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----KEGTRMRAPDYTTPEMYQTMLDCWHG 335 (359)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH----HHTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred eeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH----HcCCCCCCCCCCCHHHHHHHHHHccC
Confidence 8999999999999999999999999999999 988886542211111111 11111223344567899999999999
Q ss_pred CCCCCCChHHHHHHHHhhhc
Q 011353 296 EPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 296 ~p~~Rps~~~il~~L~~~~~ 315 (488)
||.+|||+.+++++|+.+..
T Consensus 336 dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 336 EPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp SGGGSCCHHHHHHHHHHHHH
T ss_pred ChhhCCCHHHHHHHHHHHHH
Confidence 99999999999999998764
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=356.50 Aligned_cols=249 Identities=16% Similarity=0.219 Sum_probs=203.2
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 130 (488)
..+|++++.||+|+||.||+|.. .+++.||||+++..... ....+.+|+.++..+ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 45788899999999999999995 56889999999754322 244588899999988 89999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~-- 208 (488)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++++||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999999975 34699999999999999999999999 999999999999999999999999999986322
Q ss_pred --CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH-----HhhccccccccccccCCCChHH
Q 011353 209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 209 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+... ...++...
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~ 242 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSL 242 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTS
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCC
Confidence 234578999999999999899999999999999999999999885421000 000000001111 11244556
Q ss_pred HHHHHHHHHHhccCCCCCCCCh------HHHHHH
Q 011353 282 GTELVRLASRCLQYEPRERPNP------RSLVTA 309 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~------~~il~~ 309 (488)
+..+.+++.+||+.||.+||++ .++++|
T Consensus 243 s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 7889999999999999999996 566655
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=353.73 Aligned_cols=253 Identities=21% Similarity=0.285 Sum_probs=209.8
Q ss_pred CcccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
..|.+.+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 5677888999999999999984 2357899999986542 23467899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcce
Q 011353 130 LVAEYMPNDTLAKHLFHWET----------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Ni 187 (488)
+||||+++|+|.+++..... ..+++..++.++.||+.||.|||++ +++||||||+||
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~NI 181 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHRDLAARNI 181 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC-CCcccccchheE
Confidence 99999999999999975332 3489999999999999999999999 999999999999
Q ss_pred eeCCCCCeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHH
Q 011353 188 VFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLI 260 (488)
Q Consensus 188 ll~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 260 (488)
|++.++.+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|+|+| |..||........
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 261 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999999865433 22345678999999998889999999999999999999 8888765432221
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.... ........+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 262 ~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 262 FNLL-----KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHHH-----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHh-----hcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1111 1111122344567789999999999999999999999999998764
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=356.13 Aligned_cols=248 Identities=18% Similarity=0.180 Sum_probs=203.3
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCC-----CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS-----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.|++++.||+|+||+||+|.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 588889999999999999994 57899999998532 122467799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC---eeeecCCCcccc
Q 011353 132 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNS 206 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~DfGla~~~ 206 (488)
|||++||+|.+++... ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++. +||+|||++...
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999999888542 234589999999999999999999999 9999999999999976554 999999999876
Q ss_pred CCC----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 207 RDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 207 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||............ ...... ........+
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~-~~~~~~--~~~~~~~~s 260 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII-KGKYKM--NPRQWSHIS 260 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHH-HTCCCC--CHHHHTTSC
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHH-cCCCCC--CccccccCC
Confidence 543 2346899999999999888999999999999999999999998765432221110 000000 000001245
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+.+|+.+||+.||.+|||+.++++|
T Consensus 261 ~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 261 ESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 789999999999999999999999987
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=356.35 Aligned_cols=259 Identities=19% Similarity=0.276 Sum_probs=196.8
Q ss_pred CcccccccCCCCCCCeEEEEEeCC-C---CEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCee--
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN-Q---FRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER-- 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-- 128 (488)
..|++++.||+|+||.||+|.... + ..||||+++... ....+.+.+|+.+++.++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 467788889999999999999533 3 279999997652 33456799999999999999999999999877655
Q ss_pred ----EEEEecCCCCCHHhhhccCC----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecC
Q 011353 129 ----LLVAEYMPNDTLAKHLFHWE----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (488)
Q Consensus 129 ----~lv~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (488)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||++ |++||||||+|||++.++.+||+||
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR-NFIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC-CcccCCCCcceEEEcCCCCEEEeec
Confidence 99999999999999996421 22589999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccc
Q 011353 201 GLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 273 (488)
Q Consensus 201 Gla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
|+++...... ...+++.|+|||++.+..++.++|||||||++|+|+| |..||.............. ..
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-----~~ 256 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG-----GN 256 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TC
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc-----CC
Confidence 9997654322 2345678999999999999999999999999999999 8877764322211111111 01
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCCCCc
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 321 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~~~ 321 (488)
....+...+..+.+++.+||+.||.+|||+.++++.|+.+...+....
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 112334466789999999999999999999999999999998876543
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=348.65 Aligned_cols=254 Identities=21% Similarity=0.338 Sum_probs=214.1
Q ss_pred CCcccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
..+|++.+.||+|+||+||+|... ++..||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 356788889999999999999954 58899999997543 3467799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
+++++|.+++.......+++..++.++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH-TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC-CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 9999999999876667799999999999999999999999 99999999999999999999999999998765432
Q ss_pred -ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 211 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||............ ........+...+..+.++
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~l 244 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-----EKDYRMERPEGCPEKVYEL 244 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-----HTTCCCCCCTTCCHHHHHH
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----hccCCCCCCCCCCHHHHHH
Confidence 2235678999999999999999999999999999999 88777653322221111 1111222344566789999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 289 ASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
+..||+.||.+|||+.++++.|+.+...
T Consensus 245 i~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 245 MRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999987654
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=361.01 Aligned_cols=241 Identities=19% Similarity=0.213 Sum_probs=194.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHH-HhccCCCCcccEEEEEeeCCeeEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARA-VGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
..+|++++.||+|+||.||+|.. .+++.||||+++.... .....+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 45788999999999999999995 5688999999975432 223456677776 567899999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~-- 208 (488)
||||++||+|.+++.+ .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.+|++||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999999975 34689999999999999999999998 999999999999999999999999999986322
Q ss_pred --CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 209 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+..+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~ 267 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSAR 267 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS------CCCCCSSSCHHHH
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc------ccCCCCCCCHHHH
Confidence 23457899999999999999999999999999999999999998765433222221111 1123344667899
Q ss_pred HHHHHhccCCCCCCCChHH
Q 011353 287 RLASRCLQYEPRERPNPRS 305 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~ 305 (488)
+|+.+||+.||.+||++.+
T Consensus 268 ~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 268 HLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp HHHHHHTCSSGGGSTTTTT
T ss_pred HHHHHHcccCHHhCCCCCC
Confidence 9999999999999999853
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=353.15 Aligned_cols=245 Identities=17% Similarity=0.209 Sum_probs=198.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe----CCCCEEEEEEcCCCCC----ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 127 (488)
..+|++++.||+|+||.||++.. .+++.||||+++.... .....+.+|+.+++.++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35788889999999999999996 4789999999976431 234557889999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+++|+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhC-CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999999999975 34689999999999999999999999 99999999999999999999999999987543
Q ss_pred CC----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 208 DG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 208 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
.. ....||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+.
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~ 246 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC------KLNLPPYLTQ 246 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------CCCCCTTSCH
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCH
Confidence 22 3456899999999999888999999999999999999999998765433222111111 1123344667
Q ss_pred HHHHHHHHhccCCCCCCC-----ChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rp-----s~~~il~~ 309 (488)
.+.+++.+||+.||.+|| ++.++++|
T Consensus 247 ~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred HHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 899999999999999999 67788876
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=365.99 Aligned_cols=254 Identities=16% Similarity=0.126 Sum_probs=207.5
Q ss_pred HHHhcCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeC
Q 011353 50 RTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEG 125 (488)
Q Consensus 50 ~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 125 (488)
....-...+|++++.||+|+||+||+|.. .+++.||||+++... ......+.+|+.++..++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 33444567788999999999999999995 568899999986421 11233478999999999999999999999999
Q ss_pred CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 126 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
+..++||||++||+|.+++.. ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++++||+|||+++.
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 999999999999999999964 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCC-----CccccCCCCCCccccccCC----CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCC
Q 011353 206 SRDG-----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (488)
Q Consensus 206 ~~~~-----~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
.... ....||+.|+|||++.+.. ++.++|||||||++|||+||+.||................... ...
T Consensus 218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~--~~p 295 (410)
T 3v8s_A 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL--TFP 295 (410)
T ss_dssp CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC--CCC
T ss_pred eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccc--cCC
Confidence 6543 2457899999999998755 7889999999999999999999987654332222111110000 000
Q ss_pred CChHHHHHHHHHHHHhccCCCCC--CCChHHHHHH
Q 011353 277 FSSDEGTELVRLASRCLQYEPRE--RPNPRSLVTA 309 (488)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~~p~~--Rps~~~il~~ 309 (488)
.....+.++.+||.+||+.+|.+ ||++.+|++|
T Consensus 296 ~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 296 DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 11235678999999999999988 9999999988
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-45 Score=354.69 Aligned_cols=249 Identities=19% Similarity=0.220 Sum_probs=205.7
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.|.+++.||+|+||+||+|. ..+++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 36778888999999999999 467899999999754322 23568999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCccc
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 213 (488)
|+. |+|.+++... ..++++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++.........
T Consensus 135 ~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~ 211 (348)
T 1u5q_A 135 YCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV 211 (348)
T ss_dssp CCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred cCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCccc
Confidence 997 5788888542 35699999999999999999999999 99999999999999999999999999998877777778
Q ss_pred cCCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 214 TNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 214 ~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
+|+.|+|||++. +..++.++|||||||++|||+||+.||............... ......+...+..+.+|+.
T Consensus 212 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~ 287 (348)
T 1u5q_A 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVD 287 (348)
T ss_dssp SCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCCCTTSCHHHHHHHH
T ss_pred CCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----CCCCCCCCCCCHHHHHHHH
Confidence 999999999985 467899999999999999999999887654221111111110 0111112335678999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhh
Q 011353 291 RCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
+||+.||.+|||+.+++++..-.
T Consensus 288 ~~l~~dP~~Rps~~~ll~h~~~~ 310 (348)
T 1u5q_A 288 SCLQKIPQDRPTSEVLLKHRFVL 310 (348)
T ss_dssp HHTCSSGGGSCCHHHHTTCHHHH
T ss_pred HHcccChhhCcCHHHHhhChhhh
Confidence 99999999999999999885543
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-45 Score=351.19 Aligned_cols=251 Identities=17% Similarity=0.245 Sum_probs=190.0
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.+|++++.||+|+||.||+|. ..+++.||||+++.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 467888999999999999999 45689999999975432 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 135 MPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
++ |+|.+++... ....+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 98 5899988642 124589999999999999999999998 9999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc-----------cc---ccc-
Q 011353 210 ---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-----------QT---LTD- 270 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-----------~~---~~~- 270 (488)
....+|+.|+|||++.+. .++.++|||||||++|+|+||+.||............. .. +..
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 2pmi_A 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242 (317)
T ss_dssp CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhc
Confidence 344678999999999864 58999999999999999999999887643221111000 00 000
Q ss_pred -cc------------ccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 -SC------------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 -~~------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.. .....+...+.++.+|+.+||+.||++|||+.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 0000111345789999999999999999999999987
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=345.75 Aligned_cols=251 Identities=20% Similarity=0.265 Sum_probs=197.3
Q ss_pred CcccccccCCCCCCCeEEEEEeCC----CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.+|++.+.||+|+||.||+|.... +..||||+++..... ..+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 567888999999999999998532 457999998764332 3456899999999999999999999984 5678999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||+++++|.+++... ...+++..++.++.|++.||.|||+. |++||||||+|||++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 94 MELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 9999999999999753 34699999999999999999999998 99999999999999999999999999998654432
Q ss_pred ----ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 211 ----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
...+++.|+|||++.+..++.++|||||||++|||++ |..||............. .......+...+..+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~-----~~~~~~~~~~~~~~l 246 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-----NGERLPMPPNCPPTL 246 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----TTCCCCCCTTCCHHH
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH-----cCCCCCCCCCCCHHH
Confidence 2345678999999998899999999999999999997 887776432211111100 011112344567889
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999998754
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=370.75 Aligned_cols=245 Identities=20% Similarity=0.245 Sum_probs=199.5
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC---CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..+|++++.||+|+||.||+|. ..+++.||||+++.. .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 4578889999999999999999 467899999999743 223345688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
|||+++|+|.+++.. .+.+++..+..++.||+.||.|||+ . ||+||||||+|||++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcC-CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999999965 3469999999999999999999998 7 9999999999999999999999999999864322
Q ss_pred ---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...++++.
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~ 377 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLGPEAK 377 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHH
Confidence 3456899999999999999999999999999999999999998765433222221111 1123445668899
Q ss_pred HHHHHhccCCCCCCC-----ChHHHHHH
Q 011353 287 RLASRCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rp-----s~~~il~~ 309 (488)
+|+.+||+.||.+|| |+.++++|
T Consensus 378 ~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 999999999999999 99999987
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=350.38 Aligned_cols=255 Identities=21% Similarity=0.286 Sum_probs=204.3
Q ss_pred CcccccccCCCCCCCeEEEEEeC-C----CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-N----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
..+.+.+.||+|+||.||+|... + +..||||+++..... ....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 45667788999999999999843 2 245999999865432 34568999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
||||+++|+|.+++... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++......
T Consensus 124 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp EEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 99999999999999753 35699999999999999999999999 99999999999999999999999999998654321
Q ss_pred -------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 211 -------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||............... .....+...+
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~ 276 (333)
T 1mqb_A 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-----FRLPTPMDCP 276 (333)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTCB
T ss_pred ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCC-----CcCCCcccCC
Confidence 1234678999999998899999999999999999999 88887654322221111111 1112234466
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 277 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 277 SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 789999999999999999999999999999876543
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=364.13 Aligned_cols=249 Identities=16% Similarity=0.129 Sum_probs=193.5
Q ss_pred Cccccc-ccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEee----CCeeE
Q 011353 57 AMENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE----GDERL 129 (488)
Q Consensus 57 ~~~~~i-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~~~ 129 (488)
.+|.++ +.||.|+||+||++.. .+++.||||+++. ...+.+|+.++.++ +||||+++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 5789999999999994 5689999999963 24577899887555 89999999999876 56789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC---CCCeeeecCCCcccc
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS 206 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~DfGla~~~ 206 (488)
|||||++||+|.+++.......+++..+..|+.||+.||.|||+. ||+||||||+|||++. ++.+||+|||+++..
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~ 214 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 214 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence 999999999999999765555699999999999999999999998 9999999999999987 789999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccc--cccCCCChHH
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS--CLEGQFSSDE 281 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 281 (488)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||...............+... ..........
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 294 (400)
T 1nxk_A 215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 294 (400)
T ss_dssp C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTS
T ss_pred CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccC
Confidence 543 34567999999999998999999999999999999999999886532110000000000000 0000111345
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
+.++.+||.+||+.||.+|||+.++++|-.
T Consensus 295 s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 295 SEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 678999999999999999999999999854
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=357.51 Aligned_cols=256 Identities=21% Similarity=0.278 Sum_probs=206.6
Q ss_pred CCcccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 127 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 127 (488)
...|++.+.||+|+||.||+|.. .++..||||+++... ......+.+|+.++.++ +||||+++++++.+.+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 35678888999999999999995 245689999997543 23456799999999999 89999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcc
Q 011353 128 RLLVAEYMPNDTLAKHLFHWET---------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~N 186 (488)
.++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. |++||||||+|
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~N 202 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARN 202 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGGG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhh
Confidence 9999999999999999975332 2379999999999999999999998 99999999999
Q ss_pred eeeCCCCCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHH
Q 011353 187 IVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDL 259 (488)
Q Consensus 187 ill~~~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~ 259 (488)
||++.++.+||+|||++....... ...+|+.|+|||++.+..++.++|||||||++|+|+| |..||.......
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 282 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence 999999999999999997654322 2345778999999998999999999999999999998 888876542211
Q ss_pred HhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.... ..........+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 283 ~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 283 NFYK----LIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp HHHH----HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHH----HHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1111 1111111223344567899999999999999999999999999988654
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-45 Score=352.34 Aligned_cols=245 Identities=17% Similarity=0.235 Sum_probs=196.7
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCC--------
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD-------- 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 126 (488)
.+|++++.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 4678889999999999999995 4789999999975443 24567999999999999999999999986643
Q ss_pred -------------------------------------------------eeEEEEecCCCCCHHhhhccCCC-CCCCHHH
Q 011353 127 -------------------------------------------------ERLLVAEYMPNDTLAKHLFHWET-QPMKWAM 156 (488)
Q Consensus 127 -------------------------------------------------~~~lv~E~~~~gsL~~~l~~~~~-~~l~~~~ 156 (488)
..++||||+++|+|.+++..... ...++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 37999999999999999975332 2356778
Q ss_pred HHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----------------CccccCCCCCC
Q 011353 157 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----------------RSYSTNLAFTP 220 (488)
Q Consensus 157 ~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----------------~~~~~~~~y~a 220 (488)
++.++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++..... ....+|+.|+|
T Consensus 166 ~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHhC-CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 999999999999999998 9999999999999999999999999999865443 23458999999
Q ss_pred ccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCC
Q 011353 221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300 (488)
Q Consensus 221 PE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 300 (488)
||++.+..++.++|||||||++|||++|..|+.... ......... .........++.+.+++.+||+.||.+|
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~R 317 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-RIITDVRNL------KFPLLFTQKYPQEHMMVQDMLSPSPTER 317 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-HHHHHHHTT------CCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-HHHHHhhcc------CCCcccccCChhHHHHHHHHccCCCCcC
Confidence 999999999999999999999999999875432211 111100000 0001112345678999999999999999
Q ss_pred CChHHHHHH
Q 011353 301 PNPRSLVTA 309 (488)
Q Consensus 301 ps~~~il~~ 309 (488)
||+.+++++
T Consensus 318 ps~~~~l~~ 326 (332)
T 3qd2_B 318 PEATDIIEN 326 (332)
T ss_dssp CCHHHHHHS
T ss_pred CCHHHHhhc
Confidence 999999976
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=355.84 Aligned_cols=257 Identities=16% Similarity=0.171 Sum_probs=202.9
Q ss_pred CcccccccCCCCCCCeEEEEEeCC------CCEEEEEEcCCCCCcc-----------HHHHHHHHHHHhccCCCCcccEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRRLANLL 119 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~l~ 119 (488)
..|++++.||+|+||+||+|...+ ++.||||++....... ...+..|+..+..++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 478889999999999999998644 4789999987554211 11234456667778899999999
Q ss_pred EEEeeC----CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC--CCC
Q 011353 120 GCCCEG----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDV 193 (488)
Q Consensus 120 ~~~~~~----~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~ 193 (488)
+++.+. ...+|||||+ +++|.+++... .+.+++..++.|+.||+.||.|||++ +|+||||||+|||++ .++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEESSCTT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEEecCCHHHEEEecCCCC
Confidence 999775 4589999999 99999999763 35699999999999999999999999 999999999999998 889
Q ss_pred CeeeecCCCccccCCC-----------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHH--
Q 011353 194 NPRLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-- 260 (488)
Q Consensus 194 ~~kl~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-- 260 (488)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.....+..
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999764322 223489999999999998999999999999999999999998875321110
Q ss_pred ------hhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCCC
Q 011353 261 ------RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (488)
Q Consensus 261 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 319 (488)
.......+.+.++. ....+.++.+++..||+.+|.+||++.+|++.|+.+......
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 01112222222221 123457899999999999999999999999999988765433
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=345.33 Aligned_cols=251 Identities=15% Similarity=0.159 Sum_probs=200.2
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-----ccHHHHHHHHHHHhccC---CCCcccEEEEEeeCC-
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLR---NRRLANLLGCCCEGD- 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~- 126 (488)
++|++++.||+|+||+||+|. ..+++.||||+++.... .....+.+|+.+++.++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 467888999999999999999 46789999999864221 12346778888877774 999999999998765
Q ss_pred ----eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCC
Q 011353 127 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (488)
Q Consensus 127 ----~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGl 202 (488)
..++||||+. ++|.+++.......+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 5799999997 5999999875555699999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccc--------cc--
Q 011353 203 MKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT--------LT-- 269 (488)
Q Consensus 203 a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--------~~-- 269 (488)
++..... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||............... +.
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccch
Confidence 9865543 3356799999999999999999999999999999999999988654322211111000 00
Q ss_pred ----cccccC-------CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 ----DSCLEG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 ----~~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...... ...+..+..+.+|+.+||+.||.+|||+.++++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000000 0012345789999999999999999999999986
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-45 Score=355.26 Aligned_cols=246 Identities=20% Similarity=0.217 Sum_probs=189.5
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.|++.+.||+|+||.||+|.. .+++.||||+++... ..+.+.+|+.++..++||||+++++++.+.+..++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 477888899999999999995 458899999997543 34568899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC---CCCeeeecCCCccccCCC---C
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG---R 210 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~DfGla~~~~~~---~ 210 (488)
+|+|.+++.. .+.+++..+..++.||+.||.|||+. +++||||||+|||++. ++.+||+|||+++..... .
T Consensus 132 ~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 132 GGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp SCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 9999999964 45699999999999999999999999 9999999999999975 889999999998865443 3
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+|+.|+|||++.+..++.++|||||||++|||++|..||.................. ..........+..+.+|+.
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~li~ 287 (349)
T 2w4o_A 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY-YFISPWWDEVSLNAKDLVR 287 (349)
T ss_dssp ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC-CCCTTTTTTSCHHHHHHHH
T ss_pred cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC-ccCCchhhhCCHHHHHHHH
Confidence 456799999999999989999999999999999999999998654322211111000000 0011122345678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||+.||++|||+.+++++
T Consensus 288 ~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 288 KLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTSCSSGGGSCCHHHHHHS
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999999986
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=343.83 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=209.9
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
..|++++.||+|+||.||+|...++..||||+++... ...+.+.+|+.+++.++||||+++++++. .+..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCC
Confidence 5678889999999999999998888899999997654 34678999999999999999999999986 456899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-----c
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-----~ 211 (488)
+++|.+++.......+++..++.++.|++.||.|||+. |++||||||+||+++.++.+||+|||++....... .
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 99999999653333699999999999999999999999 99999999999999999999999999998764432 2
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..+++.|+|||++.+..++.++||||||+++|+|+| |+.||............... .....+...+..+.+++.
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 244 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-----YRMVRPDNCPEELYQLMR 244 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHH
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-----cCCCCcccccHHHHHHHH
Confidence 345678999999998889999999999999999999 88777654322221111111 111223445678999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 291 RCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.||+.||++|||+.++++.|+.+...
T Consensus 245 ~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 245 LCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhccChhhCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999988654
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-45 Score=345.30 Aligned_cols=253 Identities=20% Similarity=0.313 Sum_probs=195.6
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
..|++.+.||+|+||+||+|...+ .||||+++..... ..+.+.+|+.+++.++||||+++++++ .....++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 467788899999999999998643 5999999755432 345699999999999999999999965 55678999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----- 209 (488)
+++++|.+++... ...+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 101 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 101 CEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 9999999999643 45699999999999999999999999 9999999999999999999999999998754321
Q ss_pred -CccccCCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhhH-HHhhccccccccccccCCCChHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
....+|+.|+|||++. +..++.++|||||||++|+|++|+.||...... ............. ........++..
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 257 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP-DLSKVRSNCPKR 257 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC-CTTSSCTTSCHH
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc-chhhccccCCHH
Confidence 2345799999999987 566888999999999999999999988653211 1111110111111 111223346678
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
+.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus 258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 258 MKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999998864
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=351.91 Aligned_cols=254 Identities=17% Similarity=0.212 Sum_probs=199.2
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc---HHHHHHHHHHHhccCCCCcccEEEEEeeCCe----e
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDE----R 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----~ 128 (488)
.+|++++.||+|+||.||+|. ..+++.||||+++...... ...+.+|+.++..++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 468888999999999999999 4678999999998654333 3468899999999999999999999876543 4
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++||||++|++|.+++.. .+.+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++....
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999999975 34699999999999999999999999 999999999999999999999999999976543
Q ss_pred C-------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 209 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 209 ~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
. ....||+.|+|||++.+..++.++|||||||++|+|+||+.||.................... .......
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 246 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP--SARHEGL 246 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCH--HHHSTTC
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCc--ccccCCC
Confidence 2 224579999999999999999999999999999999999999876533222111111100000 0011224
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHH-HHhhhc
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTA-LVTLQK 315 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~-L~~~~~ 315 (488)
+.++.+++.+||+.||.+||+..+++.+ |..+..
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 6789999999999999999977766654 555543
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=366.13 Aligned_cols=245 Identities=18% Similarity=0.261 Sum_probs=207.2
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
...|.+.+.||+|+||.||+|.. .+|+.||||+++... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 35688889999999999999995 478999999996432 12356789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+++|+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 95 MEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp EECCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 999999999999964 45699999999999999999999998 9999999999999999999999999999876543
Q ss_pred -CccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||................ ...+...+..+.+
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~ 245 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI------FYTPQYLNPSVIS 245 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC------CCCCTTCCHHHHH
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------cCCCccCCHHHHH
Confidence 34568999999999998765 679999999999999999999987654332221111111 1123345678999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
|+.+||+.||.+|||+.++++|
T Consensus 246 Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHHcCCCchhCcCHHHHHhC
Confidence 9999999999999999999987
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=351.37 Aligned_cols=255 Identities=20% Similarity=0.308 Sum_probs=210.4
Q ss_pred CcccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 128 (488)
..|.+.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.++.++ +||||+++++++.+.+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 4678888999999999999984 3467899999986543 2356799999999999 899999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWET----------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. +++||||||+||+++.+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG 181 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEETT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEcCC
Confidence 999999999999999976432 2489999999999999999999999 99999999999999999
Q ss_pred CCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccc
Q 011353 193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (488)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|+| |..||............
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~- 260 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM- 260 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHH-
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHH-
Confidence 999999999998765432 2335678999999998999999999999999999999 88777653221111111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.........+...+..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 261 ---~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 261 ---IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp ---HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---hccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111111222344567899999999999999999999999999987654
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-45 Score=350.18 Aligned_cols=240 Identities=19% Similarity=0.210 Sum_probs=195.3
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.|+++++||+|+||+||+|.. .+++.||||++...... ....+..|+..+..+ +||||++++++|.+.+..++|||
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e 137 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE 137 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence 577888899999999999995 47899999998754322 233456666666666 89999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---C
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R 210 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---~ 210 (488)
|+ +++|.+++... +..+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++...... .
T Consensus 138 ~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 214 (311)
T 3p1a_A 138 LC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214 (311)
T ss_dssp CC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred cc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence 99 66999988753 34699999999999999999999998 9999999999999999999999999998766443 3
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh-hHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...||+.|+|||++.+ .++.++|||||||++|||++|..||.... ...+..... .. .++...+..+.+++
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~l~~li 285 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL----PP----EFTAGLSSELRSVL 285 (311)
T ss_dssp CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCC----CH----HHHTTSCHHHHHHH
T ss_pred ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCC----Cc----ccccCCCHHHHHHH
Confidence 3457999999999885 79999999999999999999987665432 221211111 11 11223467899999
Q ss_pred HHhccCCCCCCCChHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~ 309 (488)
.+||+.||++|||+.+++++
T Consensus 286 ~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 286 VMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHSCSSTTTSCCHHHHHTS
T ss_pred HHHcCCChhhCcCHHHHHhC
Confidence 99999999999999999986
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=348.76 Aligned_cols=257 Identities=22% Similarity=0.312 Sum_probs=208.7
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCE--EEEEEcCCCC-CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFR--IAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 130 (488)
+.+|++++.||+|+||.||+|.. .++.. ||||.++... ....+.+.+|+.++.++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 46788889999999999999994 45654 4999987532 23355689999999999 89999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCee
Q 011353 131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 196 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 196 (488)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+|
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEE
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCccceEEEcCCCeEE
Confidence 999999999999997532 24699999999999999999999998 999999999999999999999
Q ss_pred eecCCCccccCC---CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccccccc
Q 011353 197 LSCFGLMKNSRD---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 272 (488)
Q Consensus 197 l~DfGla~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 272 (488)
|+|||+++.... .....+++.|+|||++.+..++.++|||||||++|+|+| |+.||...............
T Consensus 183 L~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~----- 257 (327)
T 1fvr_A 183 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG----- 257 (327)
T ss_dssp ECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-----
T ss_pred EcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC-----
Confidence 999999875332 223345788999999998889999999999999999998 99888654333222211111
Q ss_pred ccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
.....+...+..+.+++.+||+.||.+|||+.+++++|+.+.....
T Consensus 258 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 258 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 1112334566789999999999999999999999999999876543
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=346.68 Aligned_cols=255 Identities=15% Similarity=0.143 Sum_probs=207.5
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
..|++++.||+|+||.||+|. ..+++.||||++.... ....+.+|+.++..+ +|+|++++++++.+....++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 467888899999999999999 4678999999987543 234578999999999 799999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC-----eeeecCCCccccCCC
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-----PRLSCFGLMKNSRDG 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-----~kl~DfGla~~~~~~ 209 (488)
+ +++|.+++... ...+++..+..++.||+.||.|||++ |++||||||+|||++.++. +||+|||+++.....
T Consensus 88 ~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 L-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9 99999999753 34699999999999999999999998 9999999999999987776 999999999865432
Q ss_pred -----------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh----hHHHhhcccccccccccc
Q 011353 210 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA----LDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 210 -----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~----~~~~~~~~~~~~~~~~~~ 274 (488)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||.... ........ ...... ..
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~-~~ 242 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG-EKKQST-PL 242 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH-HHHHHS-CH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHH-hhccCc-cH
Confidence 23457899999999999899999999999999999999999886521 11110000 000000 00
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
.......+..+.+++..||+.||.+|||+.+|++.|+.+.....
T Consensus 243 ~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 243 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 00112345789999999999999999999999999999876543
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-45 Score=374.91 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=211.5
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
..+++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+|+.++||||+++++++.+ +..+|||||++
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~ 344 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 344 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence 4567788899999999999998888889999998654 346789999999999999999999999876 67899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----Cc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~~ 211 (488)
+|+|.+++.......+++..++.|+.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 99999999754345699999999999999999999999 9999999999999999999999999999876432 22
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..+++.|+|||++.+..++.++|||||||+||||+| |+.||.............. ......+..++..+.+||.
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~ 498 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-----GYRMPCPPECPESLHDLMC 498 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHH
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHH
Confidence 345678999999999999999999999999999999 8888765432222211111 1111233456778999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 291 RCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+||+.||++|||+.+|++.|+.+....
T Consensus 499 ~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 499 QCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 999999999999999999999886543
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=350.55 Aligned_cols=254 Identities=20% Similarity=0.303 Sum_probs=209.5
Q ss_pred CcccccccCCCCCCCeEEEEEe--------CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 126 (488)
.+|.+++.||+|+||.||+|.. .++..||||+++.... .....+.+|+.+++.+ +||||+++++++.+.+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 5778889999999999999985 3467899999986543 2355689999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
..++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. +++||||||+|||++.+
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTEN 193 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTT
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCccceEEEcCC
Confidence 99999999999999999975321 2489999999999999999999999 99999999999999999
Q ss_pred CCeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccc
Q 011353 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (488)
+.+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|+|+| |..||.............
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 273 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHh
Confidence 99999999999865443 22345678999999998889999999999999999999 888876543332221111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
. ......+...+..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 274 ~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 274 E-----GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp H-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c-----CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1 111123344667899999999999999999999999999998754
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=345.37 Aligned_cols=247 Identities=19% Similarity=0.295 Sum_probs=205.3
Q ss_pred cccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEee------------
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE------------ 124 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------------ 124 (488)
+|++++.||+|+||.||+|... +++.||||+++... ..+.+|+.+++.++||||+++++++..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 5678888899999999999964 78999999997543 357789999999999999999999864
Q ss_pred ----CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecC
Q 011353 125 ----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (488)
Q Consensus 125 ----~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (488)
....++||||+++|+|.+++.......+++..++.++.||+.||.|||++ +++|+||||+|||++.++.+||+||
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCC
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHEEEcCCCCEEECcc
Confidence 44579999999999999999765456799999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCC
Q 011353 201 GLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (488)
Q Consensus 201 Gla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
|++...... ....+|+.|+|||++.+..++.++||||||+++|+|++|..|+.... .... .+. ....
T Consensus 167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~~~-----~~~----~~~~ 236 (284)
T 2a19_B 167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-KFFT-----DLR----DGII 236 (284)
T ss_dssp TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-HHHH-----HHH----TTCC
T ss_pred hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-HHHH-----Hhh----cccc
Confidence 998875543 34467899999999998889999999999999999999997654321 1111 011 1112
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCCC
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 319 (488)
+...+..+.+++.+||+.||.+|||+.+++++|+.+.+.+..
T Consensus 237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 233456799999999999999999999999999999876543
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=345.47 Aligned_cols=259 Identities=16% Similarity=0.187 Sum_probs=204.0
Q ss_pred hcCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc---HHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 53 TSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
...+..|++++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++..++||||+++++++.+.+..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence 34478899999999999999999995 468899999997543222 35689999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++||||+++++|.+++.. ...+++..++.++.||+.||.|||+. +++|+||||+|||++.++.+||+|||++.....
T Consensus 110 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAA-GATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-cCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 999999999999999975 34699999999999999999999999 999999999999999999999999999876543
Q ss_pred C-----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 209 G-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 209 ~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
. ....+++.|+|||++.+..++.++||||||+++|+|+||+.||................... ...+...+.
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 263 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRP---STVRPGIPV 263 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCG---GGTSTTCCT
T ss_pred cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCc---cccCCCCCH
Confidence 2 23467899999999998889999999999999999999999987654432221111111111 112334567
Q ss_pred HHHHHHHHhccCCCCCCC-ChHHHHHHHHhhhcCC
Q 011353 284 ELVRLASRCLQYEPRERP-NPRSLVTALVTLQKDT 317 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rp-s~~~il~~L~~~~~~~ 317 (488)
.+.+++.+||+.||++|| |+.++++.|+......
T Consensus 264 ~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 264 AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 899999999999999999 9999999999876543
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-45 Score=344.26 Aligned_cols=253 Identities=25% Similarity=0.343 Sum_probs=203.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeC-CeeEEEEe
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLVAE 133 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~E 133 (488)
++.+|++++.||+|+||.||++.. +++.||||+++... ..+.+.+|+.+++.++||||+++++++.+. +..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 356788999999999999999987 47799999997543 456799999999999999999999997554 47899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-Ccc
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~ 212 (488)
|+++++|.+++.......+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||++...... ...
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 99999999999754333489999999999999999999999 9999999999999999999999999998765443 334
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
.+++.|+|||++.+..++.++||||||+++|+|+| |+.||............. .......+...++.+.+++.+
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~ 249 (278)
T 1byg_A 175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-----KGYKMDAPDGCPPAVYEVMKN 249 (278)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-----TTCCCCCCTTCCHHHHHHHHH
T ss_pred CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-----cCCCCCCcccCCHHHHHHHHH
Confidence 56789999999998899999999999999999998 888776543221111111 111122344567889999999
Q ss_pred hccCCCCCCCChHHHHHHHHhhhcC
Q 011353 292 CLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
||+.||.+|||+.++++.|+.+...
T Consensus 250 ~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 250 CWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcCChhhCCCHHHHHHHHHHHHhh
Confidence 9999999999999999999998753
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-45 Score=350.79 Aligned_cols=254 Identities=22% Similarity=0.291 Sum_probs=208.6
Q ss_pred ccccccCCCCCCCeEEEEEe-----CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 130 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 130 (488)
+++++.||+|+||+||++.+ .+++.||||+++.... .....+.+|+.+++.++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 37889999999999998864 2578999999986543 2355699999999999999999999999884 67899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
||||+++|+|.+++.. ..+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||++.......
T Consensus 113 v~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 9999999999999964 3499999999999999999999999 99999999999999999999999999998765432
Q ss_pred -------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh----------hccccccccccc
Q 011353 211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNIQTLTDSCL 273 (488)
Q Consensus 211 -------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----------~~~~~~~~~~~~ 273 (488)
...+|+.|+|||++.+..++.++|||||||++|+|+||..||......... ............
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 234677899999999888999999999999999999999887654322111 011111122222
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
....+..++..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 2334455678899999999999999999999999999988654
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=352.92 Aligned_cols=247 Identities=18% Similarity=0.231 Sum_probs=200.1
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCC--CCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ 132 (488)
..|++++.||+|+||.||++...+++.||||++...... ....+.+|+.++..++| |||+++++++.+.+..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 468899999999999999999888999999998754322 24568999999999976 99999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
|+ .+++|.+++.. .+.+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 57899999976 45699999999999999999999999 999999999999997 678999999999865433
Q ss_pred ---CccccCCCCCCcccccc-----------CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccC
Q 011353 210 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ......+.....
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~ 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---HHHHHhcCCccc
Confidence 23468999999999875 6688899999999999999999998865321111 111112222222
Q ss_pred CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.++...+..+.+|+..||+.||.+|||+.+++++..
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 334445578999999999999999999999999854
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=364.81 Aligned_cols=252 Identities=17% Similarity=0.139 Sum_probs=204.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
...+|++++.||+|+||+||+|.. .+++.||||+++... ......+.+|+.++..++||||++++++|.+.+..++
T Consensus 72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 151 (437)
T 4aw2_A 72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYL 151 (437)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEE
Confidence 345778888999999999999995 458899999986421 1122338899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||++||+|.+++... ...+++..+..++.||+.||.|||+. +||||||||+|||++.++++||+|||+++.....
T Consensus 152 V~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 152 VMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp EECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 99999999999999753 35699999999999999999999998 9999999999999999999999999999765433
Q ss_pred ----CccccCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChH
Q 011353 210 ----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....||+.|+|||++. ...++.++|||||||++|||+||+.||................... ........
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-~~p~~~~~ 308 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF-QFPTQVTD 308 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC-CCCSSCCC
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc-cCCccccc
Confidence 2356899999999997 4568999999999999999999999987654332221111100000 00111123
Q ss_pred HHHHHHHHHHHhccCCCCC--CCChHHHHHH
Q 011353 281 EGTELVRLASRCLQYEPRE--RPNPRSLVTA 309 (488)
Q Consensus 281 ~~~~l~~li~~cl~~~p~~--Rps~~~il~~ 309 (488)
.+.++.+||.+||..+|++ ||++.++++|
T Consensus 309 ~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 309 VSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred CCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 5678999999999988888 9999999987
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-45 Score=347.81 Aligned_cols=255 Identities=18% Similarity=0.295 Sum_probs=205.5
Q ss_pred cccccccCCCCCCCeEEEEEe-----CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeC--CeeE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 129 (488)
.|++++.||+|+||.||+|.+ .+++.||||+++... ......+.+|+.+++.++||||+++++++.+. ...+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 477888999999999999983 458899999997543 23457799999999999999999999999876 6689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 102 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp EEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 999999999999999653 34599999999999999999999999 9999999999999999999999999999876543
Q ss_pred C-------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh----------cccccccccc
Q 011353 210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD----------RNIQTLTDSC 272 (488)
Q Consensus 210 ~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~----------~~~~~~~~~~ 272 (488)
. ...+|..|+|||++.+..++.++||||||+++|+|+||..|+.......... ..........
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 2 3346778999999998889999999999999999999997653321111000 0001111111
Q ss_pred ccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
.....+...+..+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 260 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 122334556788999999999999999999999999999875
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=345.30 Aligned_cols=262 Identities=16% Similarity=0.201 Sum_probs=203.2
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
..+..|++++.||+|+||.||+|.. .++..||||+++..... ....+.+|+.+++.++||||+++++++.+.+..+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence 3456788999999999999999994 67899999999754322 3456899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
+||||+++++|.+++... ....+++..++.++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999998642 345689999999999999999999999 99999999999999999999999999987654
Q ss_pred CC----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 208 DG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 208 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
.. ....+++.|+|||++.+..++.++||||||+++|+|++|+.||........... ..+.............+.
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 265 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSE 265 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH--HHHHTTCSCCCCTTTSCH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH--HHhhcccCCCCcccccCH
Confidence 33 234578999999999988999999999999999999999998865421110000 000000001111233567
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
++.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 89999999999999999999999999999986543
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-44 Score=351.74 Aligned_cols=250 Identities=19% Similarity=0.169 Sum_probs=201.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-----CCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----NRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~~~~~~~~~~~l 130 (488)
..|.+++.||+|+||+||+|.. .+++.||||+++... .....+..|+.+++.++ ||||+++++++...+..++
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l 113 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL 113 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence 3677888899999999999995 678999999997432 33456788999999996 9999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-------------------
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD------------------- 191 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~------------------- 191 (488)
||||+ +++|.+++.......+++..+..++.||+.||.|||+. ||+||||||+|||++.
T Consensus 114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM-SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 99999 88999999876556799999999999999999999998 9999999999999975
Q ss_pred ------CCCeeeecCCCccccCCC-CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc
Q 011353 192 ------DVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (488)
Q Consensus 192 ------~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 264 (488)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|+||+.||............
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 271 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 789999999999865443 4567899999999999999999999999999999999999988653211110000
Q ss_pred -------------------cccccc-ccccCCCC--------------------hHHHHHHHHHHHHhccCCCCCCCChH
Q 011353 265 -------------------IQTLTD-SCLEGQFS--------------------SDEGTELVRLASRCLQYEPRERPNPR 304 (488)
Q Consensus 265 -------------------~~~~~~-~~~~~~~~--------------------~~~~~~l~~li~~cl~~~p~~Rps~~ 304 (488)
...... ......++ ...++.+.+|+.+||+.||.+|||+.
T Consensus 272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~ 351 (360)
T 3llt_A 272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA 351 (360)
T ss_dssp HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHH
Confidence 000000 00000000 00126788999999999999999999
Q ss_pred HHHHH
Q 011353 305 SLVTA 309 (488)
Q Consensus 305 ~il~~ 309 (488)
++++|
T Consensus 352 elL~h 356 (360)
T 3llt_A 352 ELLKH 356 (360)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 99875
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=343.04 Aligned_cols=248 Identities=21% Similarity=0.282 Sum_probs=205.6
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.+.+|++++.||+|+||+||+|.. .++..||||++.... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 356788899999999999999994 567899999986432 1224568899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp EECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT-TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 99999999999999653 4599999999999999999999998 9999999999999999999999999998655433
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
....+++.|+|||++.+..++.++||||||+++|+|++|..||.............. ....++...+..+.+|
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l 237 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDL 237 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH------TCCCCCTTSCHHHHHH
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh------CCCCCCCcCCHHHHHH
Confidence 345678999999999988899999999999999999999998876543322211111 1112334456789999
Q ss_pred HHHhccCCCCCCCChHHHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L~ 311 (488)
+.+||+.||.+|||+.++++|-.
T Consensus 238 i~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 238 ISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp HHHHCCSSGGGSCCHHHHHHCHH
T ss_pred HHHHhccChhhCCCHHHHhhCcc
Confidence 99999999999999999999843
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=347.66 Aligned_cols=247 Identities=18% Similarity=0.201 Sum_probs=205.1
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.|++++.||+|+||.||+|.. .+++.||||+++..... ....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 578888999999999999995 56899999999754322 35679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC----CeeeecCCCcccc
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 206 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~DfGla~~~ 206 (488)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+. |++||||||+||+++.++ .+||+|||++...
T Consensus 93 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 93 ILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp EECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 9999999999999964 45689999999999999999999999 999999999999999887 7999999999876
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
... ....+|+.|+|||++.+..++.++|||||||++|+|+||..||.................. .........+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 247 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--FDEEFFSHTSE 247 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc--cChhhhcccCH
Confidence 543 3446899999999999889999999999999999999999998764332222111110000 00001122456
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+++.+||+.||.+|||+.+++++
T Consensus 248 ~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 248 LAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 79999999999999999999999986
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=373.34 Aligned_cols=251 Identities=20% Similarity=0.260 Sum_probs=208.2
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
...|++++.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+|..++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 45678888899999999999995 578999999986431 22356688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||++||+|.+++.......+++..+..++.||+.||.|||++ ||+||||||+|||++.+|++||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 9999999999999765555699999999999999999999999 9999999999999999999999999999876543
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........... +...+.. ....++...+.++.+|
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~-i~~~i~~-~~~~~p~~~s~~~~dL 419 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE-VERLVKE-VPEEYSERFSPQARSL 419 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHH-HHHHHHH-CCCCCCTTSCHHHHHH
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHH-HHHHhhc-ccccCCccCCHHHHHH
Confidence 235789999999999988899999999999999999999998875421000000 0000000 1123345567889999
Q ss_pred HHHhccCCCCCCC-----ChHHHHHH
Q 011353 289 ASRCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rp-----s~~~il~~ 309 (488)
+.+||+.||.+|| ++.++++|
T Consensus 420 I~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 420 CSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 9999999999999 67888876
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=341.88 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=204.0
Q ss_pred ccccccCCCCCCCeEEEEEe-CCC---CEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCee-EEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER-LLVA 132 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lv~ 132 (488)
+++.+.||+|+||+||+|.. .++ ..||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 34447789999999999984 333 3799999976443 2356789999999999999999999999876665 9999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
||+.+|+|.+++.. ....+++..++.++.|++.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 103 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 103 PYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180 (298)
T ss_dssp CCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred ecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence 99999999999965 345689999999999999999999999 9999999999999999999999999999754322
Q ss_pred -----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
....+++.|+|||.+.+..++.++|||||||++|+|+||..||.......... ...........+...+..
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 256 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT----HFLAQGRRLPQPEYCPDS 256 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH----HHHHTTCCCCCCTTCCHH
T ss_pred ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH----HHhhcCCCCCCCccchHH
Confidence 23456789999999999899999999999999999999776664432111100 011111111223445678
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 257 l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 257 LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987654
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=342.37 Aligned_cols=254 Identities=20% Similarity=0.254 Sum_probs=209.0
Q ss_pred Ccccccc-cCCCCCCCeEEEEEeC---CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..+.+++ .||+|+||.||+|... ++..||||+++.... ...+.+.+|+.+++.++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3456666 7899999999999843 577899999986532 2356799999999999999999999999 55678999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999964 345699999999999999999999999 99999999999999999999999999998654322
Q ss_pred ------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 211 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
...+|+.|+|||++.+..++.++|||||||++|+|+| |+.||............. .......+...+.
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~-----~~~~~~~~~~~~~ 240 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-----QGKRMECPPECPP 240 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-----TTCCCCCCTTCCH
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh-----cCCcCCCCCCcCH
Confidence 2235788999999998889999999999999999999 998876543222211111 1111233445678
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
.+.+++..||+.||.+|||+.+++++|+.+.....
T Consensus 241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 241 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 89999999999999999999999999999876543
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=356.87 Aligned_cols=248 Identities=21% Similarity=0.291 Sum_probs=189.9
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccC-CCCcccEEEEEeeCC--eeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGD--ERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~l 130 (488)
.+|++++.||+|+||.||+|. ..+++.||||++.... ......+.+|+.++..+. ||||+++++++...+ ..++
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 568889999999999999999 4678999999986542 223556889999999997 999999999997554 6899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~-- 208 (488)
||||++ ++|.+++.. +.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 89 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG-GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 999997 589999964 4699999999999999999999999 999999999999999999999999999976432
Q ss_pred -----------------------CCccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc
Q 011353 209 -----------------------GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (488)
Q Consensus 209 -----------------------~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 264 (488)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||++..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i 243 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 123468899999999987 56899999999999999999999998764321111100
Q ss_pred cccc--c---------------------------cccccCC------------CChHHHHHHHHHHHHhccCCCCCCCCh
Q 011353 265 IQTL--T---------------------------DSCLEGQ------------FSSDEGTELVRLASRCLQYEPRERPNP 303 (488)
Q Consensus 265 ~~~~--~---------------------------~~~~~~~------------~~~~~~~~l~~li~~cl~~~p~~Rps~ 303 (488)
...+ + ....... .....++++.+|+.+||+.||.+|||+
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 0000 0 0000000 011345689999999999999999999
Q ss_pred HHHHHH
Q 011353 304 RSLVTA 309 (488)
Q Consensus 304 ~~il~~ 309 (488)
.++++|
T Consensus 324 ~e~l~H 329 (388)
T 3oz6_A 324 NDALKH 329 (388)
T ss_dssp HHHTTS
T ss_pred HHHhCC
Confidence 999987
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-44 Score=338.36 Aligned_cols=242 Identities=18% Similarity=0.225 Sum_probs=204.3
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.|.+.+.||+|+||.||+|.. .++..||+|++........+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT 89 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence 577888899999999999995 4578999999987655667889999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee---CCCCCeeeecCCCccccCCC---C
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG---R 210 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~DfGla~~~~~~---~ 210 (488)
+++|.+++.. ...+++..+..++.|++.||.|||++ |++||||||+||++ +.++.+||+|||++...... .
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 90 GGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp SCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 9999999865 34599999999999999999999999 99999999999999 78899999999999865443 3
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCCh----HHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS----DEGTELV 286 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~ 286 (488)
...+|+.|+|||++.+ .++.++||||||+++|+|+||+.||................. ..+. ..+..+.
T Consensus 167 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTF------TFPEKDWLNVSPQAE 239 (277)
T ss_dssp CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC------CCCHHHHTTSCHHHH
T ss_pred ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC------CCCchhhhcCCHHHH
Confidence 4567899999999875 489999999999999999999998875433222111111100 1111 2467899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++.+||+.||.+|||+.+++++
T Consensus 240 ~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 240 SLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999986
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=349.62 Aligned_cols=253 Identities=18% Similarity=0.275 Sum_probs=203.1
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCE----EEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFR----IAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.+|++++.||+|+||.||+|.. .+++. ||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 5688889999999999999994 44443 5888876443 335678999999999999999999999998754 789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
|+||+++|+|.+++... ...+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++......
T Consensus 94 v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC-CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 99999999999999763 34699999999999999999999999 99999999999999999999999999998654321
Q ss_pred ------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 211 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||.......... .+........+...+.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 246 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-----ILEKGERLPQPPICTI 246 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-----HHHTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-----HHHcCCCCCCCccCCH
Confidence 2345678999999999999999999999999999999 888876543222211 1111111223444667
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
.+.+++.+||+.||.+|||+.++++.|+.+...+
T Consensus 247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 8999999999999999999999999999987654
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=361.01 Aligned_cols=253 Identities=18% Similarity=0.135 Sum_probs=203.6
Q ss_pred hcCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 53 TSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
.-...+|++++.||+|+||.||++.. .+++.||||+++.... .....+.+|..++..++||||+++++++.+.+..
T Consensus 57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL 136 (412)
T ss_dssp SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 34456788889999999999999995 5789999999964211 1223478899999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++||||++||+|.+++.+. +..+++..+..++.||+.||.|||++ +|+||||||+|||++.++++||+|||+++....
T Consensus 137 ~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 137 YLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp EEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 9999999999999999753 23699999999999999999999998 999999999999999999999999999987654
Q ss_pred CC-----ccccCCCCCCccccc-------cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCC
Q 011353 209 GR-----SYSTNLAFTPPEYLR-------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (488)
Q Consensus 209 ~~-----~~~~~~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
.. ...||+.|+|||++. +..++.++|||||||++|||++|+.||................ .......
T Consensus 215 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~ 293 (412)
T 2vd5_A 215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK-EHLSLPL 293 (412)
T ss_dssp TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH-HHCCCC-
T ss_pred CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-cCcCCCc
Confidence 32 346899999999997 3568999999999999999999999987654332221111100 0000011
Q ss_pred CChHHHHHHHHHHHHhccCCCCCC---CChHHHHHH
Q 011353 277 FSSDEGTELVRLASRCLQYEPRER---PNPRSLVTA 309 (488)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~~p~~R---ps~~~il~~ 309 (488)
.+...+.++.+||.+||. +|.+| |++.++++|
T Consensus 294 ~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 294 VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ---CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 123456789999999999 99998 589998877
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=343.74 Aligned_cols=249 Identities=15% Similarity=0.162 Sum_probs=204.4
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..|.+++.||+|+||.||++.. .+++.||||+++.........+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 3677888899999999999995 578999999998655444567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee---CCCCCeeeecCCCccccCCC--C
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG--R 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~DfGla~~~~~~--~ 210 (488)
++++|.+++.. .+.+++..+..++.|++.||.|||+. |++|+||||+||++ +.++.+||+|||++...... .
T Consensus 89 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (304)
T 2jam_A 89 SGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165 (304)
T ss_dssp CSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred CCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence 99999999865 34689999999999999999999999 99999999999999 78899999999998765443 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+|+.|+|||++.+..++.++|||||||++|+|++|..||.................. .........+..+.+++.
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~ 243 (304)
T 2jam_A 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYE--FESPFWDDISESAKDFIC 243 (304)
T ss_dssp HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCC--CCTTTTTTSCHHHHHHHH
T ss_pred cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCccccccCCHHHHHHHH
Confidence 345789999999999888999999999999999999999988764332222111111110 111222345678999999
Q ss_pred HhccCCCCCCCChHHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L 310 (488)
+||+.||.+|||+.+++++-
T Consensus 244 ~~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 244 HLLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp HHHCSSTTTSCCHHHHHTSH
T ss_pred HHcCCChhHCcCHHHHhcCc
Confidence 99999999999999999873
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=343.65 Aligned_cols=247 Identities=17% Similarity=0.181 Sum_probs=197.2
Q ss_pred ccccc-ccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.|+++ +.||+|+||.||+|. ..+++.||||++..........+.+|+.++.++ +||||+++++++.+.+..++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 46665 568999999999999 567899999999876555677899999999985 799999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC---eeeecCCCccccCCC--
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~DfGla~~~~~~-- 209 (488)
+++|+|.+++.. ...+++..+..++.||+.||.|||++ +++||||||+|||++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999999975 34699999999999999999999999 9999999999999987766 999999998754321
Q ss_pred ---------CccccCCCCCCcccccc-----CCCCCCccchhhHHHHHHHHhCCCCCCchhhHH-----------Hhhcc
Q 011353 210 ---------RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----------IRDRN 264 (488)
Q Consensus 210 ---------~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-----------~~~~~ 264 (488)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||....... .....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 12347899999999975 458899999999999999999999886532100 00000
Q ss_pred ccccccccccCCCC----hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 265 IQTLTDSCLEGQFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 265 ~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+... ...++ ...+..+.+|+.+||+.||.+|||+.++++|
T Consensus 250 ~~~i~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 250 FESIQEG--KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHC--CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhcc--CcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000000 00111 1245789999999999999999999999987
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-44 Score=362.53 Aligned_cols=249 Identities=16% Similarity=0.186 Sum_probs=184.4
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeC-----Cee
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 128 (488)
.+|++++.||+|+||+||+|. ..+++.||||++..... ...+++.+|+.+|+.++||||+++++++... ..+
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 468899999999999999999 45789999999975432 2356789999999999999999999999543 568
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++||||+ +++|.+++.. ...+++..+..++.||+.||.|||+. |||||||||+|||++.++.+||+|||+++....
T Consensus 133 ~lv~e~~-~~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCC-SEEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEecc-ccchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhC-CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 9999998 5689999964 45699999999999999999999999 999999999999999999999999999986532
Q ss_pred C-------------------------------CccccCCCCCCccccc-cCCCCCCccchhhHHHHHHHHh---------
Q 011353 209 G-------------------------------RSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLS--------- 247 (488)
Q Consensus 209 ~-------------------------------~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~t--------- 247 (488)
. ....+|+.|+|||++. +..++.++|||||||++|||+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 1 2345689999999864 5669999999999999999999
Q ss_pred --CCCCCCchhh---------------------HHHh------hccc---------------ccccccccc---CCCChH
Q 011353 248 --GKHIPPSHAL---------------------DLIR------DRNI---------------QTLTDSCLE---GQFSSD 280 (488)
Q Consensus 248 --g~~p~~~~~~---------------------~~~~------~~~~---------------~~~~~~~~~---~~~~~~ 280 (488)
|+.+|++... +.+. .... ......... ....+.
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 5555544210 0000 0000 000000000 001123
Q ss_pred HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 281 EGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 281 ~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.++.+|+.+||..||.+|||+.++++|
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 46789999999999999999999999998
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=349.42 Aligned_cols=257 Identities=19% Similarity=0.297 Sum_probs=209.7
Q ss_pred CcccccccCCCCCCCeEEEEEe-----CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCC--eeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~ 129 (488)
..|++++.||+|+||.||++.. .+++.||||++........+.+.+|+.+++.++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4578889999999999999983 358899999998766555678999999999999999999999987654 689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++++|.+++... ...+++..++.++.||+.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 121 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp EEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred EEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 999999999999999763 34599999999999999999999998 9999999999999999999999999999876543
Q ss_pred C-------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh---c--------cccccccc
Q 011353 210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---R--------NIQTLTDS 271 (488)
Q Consensus 210 ~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---~--------~~~~~~~~ 271 (488)
. ...++..|+|||++.+..++.++|||||||++|+|+||..|+.......... . .....+..
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 2 2345677999999998889999999999999999999997765432111110 0 00111111
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
......+..++..+.+++.+||+.||.+|||+.++++.|+.+.+
T Consensus 279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11122344567889999999999999999999999999998865
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=354.70 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=195.6
Q ss_pred cccccccCCCCCCCeEEEEEeC--C--CCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEee-CCeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE--N--QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv 131 (488)
.+++.+.||+|+||+||+|... + +..||||.++.... ...+.|.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4566778999999999999842 2 24689999975432 345679999999999999999999998754 5678999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999965 344689999999999999999999999 9999999999999999999999999999764332
Q ss_pred ------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCC-CCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 210 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 210 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
....+|+.|+|||++.+..++.++|||||||++|||+||. .||........... .........+..++
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~-----~~~~~~~~~p~~~~ 322 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY-----LLQGRRLLQPEYCP 322 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHH-----HHTTCCCCCCTTCC
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHH-----HHcCCCCCCCCCCC
Confidence 2234567899999999999999999999999999999954 44433211100000 00001112234456
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 323 ~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 323 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 789999999999999999999999999999876543
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=339.44 Aligned_cols=249 Identities=18% Similarity=0.203 Sum_probs=206.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..+|++++.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 35688889999999999999994 5689999999865432 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC---eeeecCCCccccCCC
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNSRDG 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~DfGla~~~~~~ 209 (488)
||+++++|.+.+.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 99999999998865 34699999999999999999999999 9999999999999976655 999999999766544
Q ss_pred C---ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 ~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
. ...+|+.|+|||++.+..++.++||||||+++|+|++|+.||................... ........++.+.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 239 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY--PSPEWDTVTPEAK 239 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CTTTTTTSCHHHH
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccC--CchhhcccCHHHH
Confidence 3 3567899999999999899999999999999999999999987654332222211111110 0111123567899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++.+||+.||++|||+.+++++
T Consensus 240 ~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 240 SLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHcccChhhCCCHHHHhcC
Confidence 99999999999999999999997
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=368.18 Aligned_cols=248 Identities=17% Similarity=0.231 Sum_probs=206.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
....|++++.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+++.++||||+++++++.+....++
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 346778888899999999999995 568999999996432 1235678899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 131 VAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
||||++||+|.+++.... ...+++..+..++.||+.||.|||++ ||+||||||+|||++.+|++||+|||+++....
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc-CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999999999997533 34699999999999999999999999 999999999999999999999999999987544
Q ss_pred C----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh----HHHhhccccccccccccCCCChH
Q 011353 209 G----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEGQFSSD 280 (488)
Q Consensus 209 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
. ....||+.|+|||++.+..++.++|||||||++|||+||+.||..... ..+.... ... ...++..
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i----~~~--~~~~p~~ 415 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV----LEQ--AVTYPDK 415 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH----HHC--CCCCCTT
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH----hhc--ccCCCcc
Confidence 3 234789999999999998999999999999999999999999875421 1111111 111 1123455
Q ss_pred HHHHHHHHHHHhccCCCCCCCCh-----HHHHHH
Q 011353 281 EGTELVRLASRCLQYEPRERPNP-----RSLVTA 309 (488)
Q Consensus 281 ~~~~l~~li~~cl~~~p~~Rps~-----~~il~~ 309 (488)
.+..+.+|+.+||+.||.+||++ .++++|
T Consensus 416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 67889999999999999999975 666655
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=339.02 Aligned_cols=247 Identities=15% Similarity=0.187 Sum_probs=199.8
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.|.+.+.||+|+||.||++.. .++..||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 677888899999999999994 568899999987543 234678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee---CCCCCeeeecCCCccccCCC-
Q 011353 136 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 136 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~DfGla~~~~~~- 209 (488)
++|+|.+++... ....+++..++.++.||+.||.|||+. |++||||||+|||+ +.++.+||+|||++......
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 999999998542 235699999999999999999999999 99999999999999 45688999999999765433
Q ss_pred --CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....+|+.|+|||++. ..++.++|||||||++|+|++|+.||.................... ......++.+.+
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 257 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYA---VECRPLTPQAVD 257 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---C--CCCCHHHHH
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccc---cccCcCCHHHHH
Confidence 3456789999999986 5688999999999999999999999876543333221111111000 001124568999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
|+.+||+.||.+|||+.+++++
T Consensus 258 li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 258 LLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999875
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=355.44 Aligned_cols=247 Identities=18% Similarity=0.231 Sum_probs=199.5
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccC--CCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 132 (488)
..|++++.||+|+||.||++...+++.||||++..... .....+.+|+.+|..++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 34888999999999999999977799999999975432 23467899999999996 599999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
| +.+++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 136 E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp E-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 9 568899999976 34689999999999999999999999 999999999999995 589999999999865432
Q ss_pred ---CccccCCCCCCcccccc-----------CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccC
Q 011353 210 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ....+.+.....
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---~~~~~~~~~~~~ 287 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI 287 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHCTTSCC
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH---HHHHHhCccccC
Confidence 23468999999999875 3688899999999999999999998865321110 011111111122
Q ss_pred CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.++...+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 288 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred CCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence 233334578999999999999999999999998844
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=341.45 Aligned_cols=242 Identities=17% Similarity=0.210 Sum_probs=203.2
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+|++++.||+|+||+||+|.. .+++.||||+++.... .....+.+|+..+..+ +||||+++++++.+.+..++|||
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e 91 (289)
T 1x8b_A 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 91 (289)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEE
Confidence 577888899999999999995 4789999999976432 2356788999999999 89999999999999999999999
Q ss_pred cCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-------------------C
Q 011353 134 YMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-------------------D 192 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-------------------~ 192 (488)
|+++++|.+++.... ...+++..++.++.||+.||.|||++ +++||||||+|||++. .
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 92 YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp CCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC--------------------C
T ss_pred ecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 999999999996532 25689999999999999999999999 9999999999999984 4
Q ss_pred CCeeeecCCCccccCCCCccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchh-hHHHhhcccccccc
Q 011353 193 VNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTD 270 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~ 270 (488)
..+||+|||++..........+|+.|+|||++.+. .++.++|||||||++|+|++|..++.... ...+.....
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~----- 245 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQGRL----- 245 (289)
T ss_dssp CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTTCC-----
T ss_pred eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcCCC-----
Confidence 47999999999988777777799999999999875 56689999999999999999996654332 111111111
Q ss_pred ccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+...+..+.+++.+||+.||.+|||+.+++++
T Consensus 246 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 246 ----PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ----CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 12333456789999999999999999999999886
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=348.61 Aligned_cols=238 Identities=19% Similarity=0.192 Sum_probs=201.7
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 127 (488)
.+|++++.||+|+||+||+|. ..+++.||||+++..... ....+.+|+.+++.++||||+++++++.+.+.
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~ 103 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF 103 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence 468888999999999999999 567899999999764321 22357789999999999999999999999999
Q ss_pred eEEEEecCCCC-CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 128 RLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 128 ~~lv~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
.++||||+.+| +|.+++.. ...+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++..
T Consensus 104 ~~lv~e~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEEEECCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 99999998776 99999965 44699999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC---ccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 207 RDGR---SYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 207 ~~~~---~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
.... ...+|+.|+|||++.+..+ +.++|||||||++|+|++|+.||..... . .... ...+...+
T Consensus 181 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~----~~~~--~~~~~~~~ 248 (335)
T 3dls_A 181 ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------T----VEAA--IHPPYLVS 248 (335)
T ss_dssp CTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------G----TTTC--CCCSSCCC
T ss_pred CCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------H----Hhhc--cCCCcccC
Confidence 5442 3468999999999998776 7899999999999999999988864211 0 0000 01122356
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.++.+|+.+||+.||.+|||+.+++++
T Consensus 249 ~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 249 KELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 789999999999999999999999987
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=347.30 Aligned_cols=256 Identities=18% Similarity=0.205 Sum_probs=204.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEee----CCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv 131 (488)
..|++++.||+|+||.||++.. .+++.||||++........+.+.+|+.+++.++||||+++++++.. ....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 5788899999999999999995 6789999999876554556779999999999999999999999873 3478999
Q ss_pred EecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 132 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
|||+++|+|.+++... ....+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 9999999999999652 345699999999999999999999999 9999999999999999999999999998765321
Q ss_pred -------------CccccCCCCCCccccccCC---CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccc
Q 011353 210 -------------RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273 (488)
Q Consensus 210 -------------~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
....+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||...... ............
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~ 264 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQNQL 264 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHHCC-
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhhccC
Confidence 1224589999999987654 688999999999999999999887432110 000000000011
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
....+...+..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 265 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 265 SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 1112234567899999999999999999999999999988653
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=350.10 Aligned_cols=255 Identities=17% Similarity=0.147 Sum_probs=197.6
Q ss_pred CcccccccCCCCCCCeEEEEEeC----CCCEEEEEEcCCCCCc-----------cHHHHHHHHHHHhccCCCCcccEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-----------DARQFLEEARAVGQLRNRRLANLLGC 121 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~~ 121 (488)
.+|.+++.||+|+||.||+|... ++..||||++...... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57888999999999999999964 5788999998765422 12246778899999999999999999
Q ss_pred Eee----CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC--Ce
Q 011353 122 CCE----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV--NP 195 (488)
Q Consensus 122 ~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~--~~ 195 (488)
+.. ....++||||+ +++|.+++... +.+++..++.++.||+.||.|||+. +++||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCcCHHHEEEccCCCCcE
Confidence 988 67899999999 99999999753 3699999999999999999999999 999999999999998777 99
Q ss_pred eeecCCCccccCCC-----------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHH----
Q 011353 196 RLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI---- 260 (488)
Q Consensus 196 kl~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~---- 260 (488)
||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999764321 234678999999999998899999999999999999999998854211110
Q ss_pred -hhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 261 -RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 261 -~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.......+.............+..+.+++..||+.||.+|||+.+|++.|+.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111111111000000011345689999999999999999999999999987654
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=348.83 Aligned_cols=254 Identities=20% Similarity=0.322 Sum_probs=208.2
Q ss_pred CcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
..|++.+.||+|+||.||+|... ++..||||++...... ....+.+|+.+++.++||||+++++++.+.+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 104 (322)
T 1p4o_A 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104 (322)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence 45778888999999999999843 3678999999755432 3456899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCC
Q 011353 130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfG 201 (488)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||++ |++||||||+|||++.++.+||+|||
T Consensus 105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CCccCCCccceEEEcCCCeEEECcCc
Confidence 9999999999999996421 14579999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccccccccc
Q 011353 202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 202 la~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
+++..... ....+|+.|+|||++.+..++.++|||||||++|+|+| |..||................ .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----~ 258 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-----L 258 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC-----C
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC-----c
Confidence 98765332 22345788999999998899999999999999999999 777765543222221111110 1
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
...+...+..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 122344567899999999999999999999999999987653
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=363.84 Aligned_cols=247 Identities=16% Similarity=0.194 Sum_probs=193.6
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeC------Ce
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 127 (488)
.+|++++.||+|+||+||+|. ..+++.||||++.... ....+++.+|+.+++.++||||+++++++... ..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 568889999999999999999 4568999999997542 22356788999999999999999999999654 45
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+++ +|.+.+. ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 142 ~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 7999999976 4777773 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccc------------------
Q 011353 208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ------------------ 266 (488)
Q Consensus 208 ~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~------------------ 266 (488)
.. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+............
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 43 345789999999999999999999999999999999999999876421111000000
Q ss_pred ---------------ccccccccCC---CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 267 ---------------TLTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 267 ---------------~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.......... .....+.++.+|+.+||+.||.+|||+.++++|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000 001126789999999999999999999999987
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-44 Score=342.41 Aligned_cols=254 Identities=23% Similarity=0.303 Sum_probs=203.2
Q ss_pred CcccccccCCCCCCCeEEEEEeCC----CCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEe-eCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~l 130 (488)
..|++.+.||+|+||+||+|...+ ...||+|.++.... ...+.+.+|+.++++++||||+++++++. ..+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788899999999999998532 23689999986443 23567899999999999999999999864 4567899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||+++|+|.+++.. ....+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999965 345689999999999999999999999 9999999999999999999999999999765432
Q ss_pred -------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh-hHHHhhccccccccccccCCCChHH
Q 011353 210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 210 -------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+.... .......... ......+...
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 257 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-----GRRLLQPEYC 257 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT-----TCCCCCCTTC
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc-----CCCCCCCccC
Confidence 22345678999999999999999999999999999999665543321 1111100000 0111223345
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 258 ~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 258 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 678999999999999999999999999999987653
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=352.43 Aligned_cols=256 Identities=18% Similarity=0.281 Sum_probs=207.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEeCC-C-----CEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLEN-Q-----FRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 126 (488)
....|.+.+.||+|+||.||+|.... + ..||||.++..... ..+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 34678888899999999999999532 2 47999999865432 355689999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWE------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (488)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGCEEEGGGE
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCcccceEEECCCCe
Confidence 9999999999999999996421 34589999999999999999999999 9999999999999999999
Q ss_pred eeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccc
Q 011353 195 PRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 267 (488)
Q Consensus 195 ~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 267 (488)
+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|+| |..||.......... .
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~----~ 278 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY----K 278 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH----H
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH----H
Confidence 9999999997643321 2345678999999998899999999999999999999 877776432111110 0
Q ss_pred cccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
..........+...+..+.+++..||+.||.+|||+.++++.|+.+..
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 111111112233356789999999999999999999999999988754
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=340.05 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=203.6
Q ss_pred CCcccccccCCCCCCCeEEEEEeCC----CCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
..+|.+.+.||+|+||+||+|...+ +..||||.+..... ...+.+.+|+.+++.++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 3567788889999999999998432 34699999986532 245679999999999999999999999865 45789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||+++++|.+++... ...+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp EEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred EEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 99999999999999653 34589999999999999999999998 9999999999999999999999999998865443
Q ss_pred ----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
....+++.|+|||++.+..++.++||||||+++|+|+| |+.||............ ........+...++.
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 242 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL-----EKGDRLPKPDLCPPV 242 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHH-----HHTCCCCCCTTCCHH
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHH-----hcCCCCCCCCCCCHH
Confidence 22345778999999998899999999999999999998 99887643221111110 000111223345678
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 243 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999998754
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=349.16 Aligned_cols=240 Identities=17% Similarity=0.217 Sum_probs=179.7
Q ss_pred ccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
+.||+|+||+||+|.. .+++.||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 6689999999999995 56899999999643 3567889999999996 99999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC---CeeeecCCCccccCCC----Cccc
Q 011353 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNSRDG----RSYS 213 (488)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~DfGla~~~~~~----~~~~ 213 (488)
.+++.. .+.+++..+..++.||+.||.|||++ +++||||||+|||++.++ .+||+|||+++..... ....
T Consensus 94 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKK--KKHFSETEASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999975 35699999999999999999999999 999999999999997665 7999999999865433 2345
Q ss_pred cCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCC--CC----hHHHHHHHH
Q 011353 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FS----SDEGTELVR 287 (488)
Q Consensus 214 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~l~~ 287 (488)
+|+.|+|||++.+..++.++|||||||++|+|++|+.||......... .....+......+. ++ ...+.++.+
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 249 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHHHTTTCCCCCSHHHHTSCHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHHHHcCCCCCCcccccCCCHHHHH
Confidence 689999999999999999999999999999999999988653221000 00000111111111 11 235678999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
|+.+||+.||.+|||+.+++++
T Consensus 250 li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 250 LIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHHCCCChhHCCCHHHHhcC
Confidence 9999999999999999998866
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=344.11 Aligned_cols=250 Identities=19% Similarity=0.220 Sum_probs=198.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc--HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.+|++++.||+|+||+||+|.. .+++.||||++....... .+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 5688899999999999999995 568999999987654322 4568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++++|.+++.. ...+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (311)
T 4agu_A 83 YCDHTVLHELDRY--QRGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY 159 (311)
T ss_dssp CCSEEHHHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHhh--hcCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence 9999999998864 35699999999999999999999999 9999999999999999999999999999865532
Q ss_pred CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc---c-----------------ccc
Q 011353 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---I-----------------QTL 268 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~---~-----------------~~~ 268 (488)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||............ . ...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence 23467899999999986 56899999999999999999999988754321111000 0 000
Q ss_pred ccccccCCC-----ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 TDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 ~~~~~~~~~-----~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+...... ....+..+.+|+.+||+.||.+|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000 02346779999999999999999999999987
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=339.54 Aligned_cols=248 Identities=17% Similarity=0.206 Sum_probs=187.8
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
..+.+|++++.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence 3456788999999999999999995 678999999986432 123467899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++++|.+++... ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSH-GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEEECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 999999999999999753 35699999999999999999999999 9999999999999999999999999998865432
Q ss_pred ----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
....+|+.|+|||++.+..++.++||||||+++|+|++|+.||............ ... ....+...+.++
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~ 239 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV----VLA--DYEMPSFLSIEA 239 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C----CSS--CCCCCTTSCHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH----hhc--ccCCccccCHHH
Confidence 2346789999999999888999999999999999999999888654321111111 100 112334456789
Q ss_pred HHHHHHhccCCCCCCCChHHHHHH
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+++.+||+.||.+|||+.+++++
T Consensus 240 ~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 240 KDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHcccCHhhCCCHHHHhcC
Confidence 999999999999999999999876
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-44 Score=373.16 Aligned_cols=245 Identities=20% Similarity=0.262 Sum_probs=202.1
Q ss_pred cCCCCCCCeEEEEEeC---CCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
+||+|+||.||+|.+. ++..||||+++.... ...+.|.+|+.+|+.++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6899999999999853 466799999986532 356789999999999999999999999976 56899999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-------cc
Q 011353 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------SY 212 (488)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-------~~ 212 (488)
|.+++... ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 422 L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 99999653 45699999999999999999999999 99999999999999999999999999998754321 12
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
.+++.|+|||++.+..++.++|||||||++|||+| |+.||............ ........+..++..+.+||..
T Consensus 500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i-----~~~~~~~~p~~~~~~l~~li~~ 574 (613)
T 2ozo_A 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-----EQGKRMECPPECPPELYALMSD 574 (613)
T ss_dssp --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHH-----HTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCcCCHHHHHHHHH
Confidence 34578999999999999999999999999999998 99888654322221111 1111223445567899999999
Q ss_pred hccCCCCCCCChHHHHHHHHhhhcC
Q 011353 292 CLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
||+.||++|||+.+|++.|+.+...
T Consensus 575 cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 575 CWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp TTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999987654
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=348.04 Aligned_cols=252 Identities=17% Similarity=0.229 Sum_probs=194.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
..+.+|++++.||+|+||+||+|. ..+++.||||+++..... ....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 446688999999999999999999 457899999999755432 24467899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee-----CCCCCeeeecCCCccc
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF-----DDDVNPRLSCFGLMKN 205 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill-----~~~~~~kl~DfGla~~ 205 (488)
||||+++ +|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 111 v~e~~~~-~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCSE-EHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCCC-CHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 9999975 99999975 34599999999999999999999999 99999999999999 4555699999999876
Q ss_pred cCCC----CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccc--cccc-------
Q 011353 206 SRDG----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT--LTDS------- 271 (488)
Q Consensus 206 ~~~~----~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--~~~~------- 271 (488)
.... ....+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||............... ....
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 5432 3345689999999998754 899999999999999999999988754322111110000 0000
Q ss_pred ---cccCC------------CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 ---CLEGQ------------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 ---~~~~~------------~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... .+...+.++.+|+.+||+.||.+|||+.++++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 00000 011245789999999999999999999999986
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=353.39 Aligned_cols=256 Identities=15% Similarity=0.139 Sum_probs=204.7
Q ss_pred CcccccccCCCCCCCeEEEEEeC---------CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCccc----------
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE---------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN---------- 117 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~---------- 117 (488)
..|.+++.||+|+||.||+|... +++.||||++... ..+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 47888899999999999999954 3789999998754 35789999999999999987
Q ss_pred -----EEEEEee-CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC
Q 011353 118 -----LLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191 (488)
Q Consensus 118 -----l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~ 191 (488)
+++++.. .+..++||||+ +++|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN-EYVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEEcC
Confidence 6777776 67899999999 99999999865446799999999999999999999999 9999999999999999
Q ss_pred CC--CeeeecCCCccccCCC-----------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh--
Q 011353 192 DV--NPRLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-- 256 (488)
Q Consensus 192 ~~--~~kl~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-- 256 (488)
++ .+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 88 8999999999764322 23367899999999999899999999999999999999998886542
Q ss_pred hHHHhhcc--cccccccccc-CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCCC
Q 011353 257 LDLIRDRN--IQTLTDSCLE-GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (488)
Q Consensus 257 ~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 319 (488)
...+.... .......... .......+..+.+|+.+||+.||.+|||+.++++.|+.+......
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 11111100 0000000000 000112457899999999999999999999999999998766543
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-44 Score=338.20 Aligned_cols=247 Identities=18% Similarity=0.250 Sum_probs=207.8
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
-...+|++++.||+|+||.||+|.. .++..||||++.... ......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence 3456788999999999999999995 467899999986431 123467899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++|+|.+++... +.+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 999999999999999753 4599999999999999999999998 9999999999999999999999999998765432
Q ss_pred --CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....+++.|+|||++.+..++.++||||||+++|+|++|..||............... ...++...+..+.+
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 241 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------DLKFPPFLSDGSKD 241 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHH
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc------ccCCCCcCCHHHHH
Confidence 3456789999999999988999999999999999999999988654322221111110 11233445678999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+||+.||.+|||+.+++++
T Consensus 242 li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 242 LISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp HHHHHSCSSGGGSCCHHHHHTC
T ss_pred HHHHHhhcCHhhCCCHHHHhhC
Confidence 9999999999999999999987
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=350.80 Aligned_cols=249 Identities=19% Similarity=0.144 Sum_probs=197.7
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCC-----CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS-----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.|++++.||+|+||.||+|.. .++..||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 27 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 106 (345)
T 3hko_A 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV 106 (345)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred heeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEE
Confidence 577888889999999999994 56889999998643 223456799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC--------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhc
Q 011353 132 AEYMPNDTLAKHLFHWE--------------------------------------TQPMKWAMRLRVALHIAEALEYCTS 173 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~ 173 (488)
|||+++|+|.+++.... ...+++..++.++.||+.||.|||+
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 186 (345)
T 3hko_A 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN 186 (345)
T ss_dssp EECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999985210 1123577889999999999999999
Q ss_pred CCCcccccccCcceeeCCCC--CeeeecCCCccccCC--------CCccccCCCCCCcccccc--CCCCCCccchhhHHH
Q 011353 174 KERALYHDLNAYRIVFDDDV--NPRLSCFGLMKNSRD--------GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTL 241 (488)
Q Consensus 174 ~~~iiH~Dlkp~Nill~~~~--~~kl~DfGla~~~~~--------~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~ 241 (488)
. +++||||||+|||++.++ .+||+|||+++.... .....+|+.|+|||++.+ ..++.++|||||||+
T Consensus 187 ~-~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 187 Q-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp T-TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred C-CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 9 999999999999998766 899999999975422 134467899999999975 568999999999999
Q ss_pred HHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 242 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 242 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+|+|++|+.||.................. .........+..+.+|+.+||+.||.+|||+.+++++
T Consensus 266 l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 266 LHLLLMGAVPFPGVNDADTISQVLNKKLC--FENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCC--TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHCCCCCCCCChHHHHHHHHhcccc--cCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 99999999988754332222111111100 0001112356789999999999999999999999987
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-44 Score=350.21 Aligned_cols=247 Identities=17% Similarity=0.235 Sum_probs=195.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCC------e
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 127 (488)
..|++++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 4688889999999999999995 67899999999654322 2456899999999999999999999997653 4
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 59999999 8899999964 4699999999999999999999999 99999999999999999999999999998765
Q ss_pred CC-CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-------c-------------
Q 011353 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------I------------- 265 (488)
Q Consensus 208 ~~-~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------~------------- 265 (488)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.......... .
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 43 44578999999999987 67999999999999999999999988754221110000 0
Q ss_pred ------cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 ------QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 ------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
........ .......++.+.+|+.+||+.||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 260 NYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000000 01123456789999999999999999999999997
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=354.25 Aligned_cols=251 Identities=18% Similarity=0.228 Sum_probs=203.7
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.+|++++.||+|+||+||++.. .++..||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 5688899999999999999995 46899999999865322 345689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC--CCCcc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSY 212 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~--~~~~~ 212 (488)
+++++|.+++.. .+.+++..+..++.|++.||.|||++.|++||||||+|||++.++.+||+|||++.... .....
T Consensus 113 ~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 190 (360)
T 3eqc_A 113 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190 (360)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCC
Confidence 999999999975 34599999999999999999999984389999999999999999999999999986532 22345
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc----------------------------
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---------------------------- 264 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~---------------------------- 264 (488)
.+|+.|+|||++.+..++.++|||||||++|+|+||+.||............
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 3eqc_A 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD 270 (360)
T ss_dssp CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------------
T ss_pred CCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence 7899999999999989999999999999999999999988654322111000
Q ss_pred ----------ccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 265 ----------IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 265 ----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+.............+.++.+|+.+||+.||.+|||+.++++|
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 271 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000000011112346789999999999999999999999998
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=348.14 Aligned_cols=252 Identities=17% Similarity=0.269 Sum_probs=200.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc--HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.+.+|++++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 356889999999999999999995 458999999986554322 44588999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 103 ~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHHS--TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHC-CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999999888754 34599999999999999999999999 9999999999999999999999999999765432
Q ss_pred --CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc--------------------cc
Q 011353 210 --RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------------IQ 266 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--------------------~~ 266 (488)
....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||............ ..
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 334678999999999875 6899999999999999999999888754321111000 00
Q ss_pred ccccccccCCC-----ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 267 TLTDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 267 ~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....+...... .+..+..+.+|+.+||+.||.+|||+.+++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000000 12346789999999999999999999999986
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=343.08 Aligned_cols=250 Identities=17% Similarity=0.244 Sum_probs=199.2
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc--CCCCcccEEEEEeeC----CeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL--RNRRLANLLGCCCEG----DERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~----~~~~lv 131 (488)
+|++++.||+|+||.||+|... ++.||||++... ....+.+|.+++..+ +||||+++++++... ...++|
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred ceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 6788889999999999999974 789999998643 334556666666655 899999999999887 789999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-------CcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE-------RALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-------~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
|||+++|+|.+++.. ..+++..++.++.|++.||.|||+.. +++||||||+|||++.++.+||+|||+++
T Consensus 114 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 114 TDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 999999999999964 35999999999999999999999752 89999999999999999999999999997
Q ss_pred ccCCCC--------ccccCCCCCCccccccCCCCCC------ccchhhHHHHHHHHhC----------CCCCCchh----
Q 011353 205 NSRDGR--------SYSTNLAFTPPEYLRTGRVTPE------SVMYSFGTLLLDLLSG----------KHIPPSHA---- 256 (488)
Q Consensus 205 ~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~------~Dv~slG~~l~el~tg----------~~p~~~~~---- 256 (488)
...... ...+|+.|+|||++.+...+.. +|||||||++|||+|| +.||....
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~ 270 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP 270 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC
Confidence 654321 3468999999999988776665 9999999999999999 44443211
Q ss_pred -hHHHhhccccccccccccCCCC-----hHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 257 -LDLIRDRNIQTLTDSCLEGQFS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
......... ........+ ..++..+.+|+.+||+.||.+|||+.+++++|+.+.+...
T Consensus 271 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 271 SYEDMREIVC----IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp CHHHHHHHHT----TSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred chhhhHHHHh----hhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 001110000 011111222 3678889999999999999999999999999999987653
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-44 Score=343.10 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=197.6
Q ss_pred CcccccccCCCCCCCeEEEEEe-C---CCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCe---
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-E---NQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE--- 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~---~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 127 (488)
..|.+.+.||+|+||.||+|.. . ++..||||+++..... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 5677888899999999999984 2 3458999999755322 34568999999999999999999999987553
Q ss_pred --eEEEEecCCCCCHHhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCC
Q 011353 128 --RLLVAEYMPNDTLAKHLFH----WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (488)
Q Consensus 128 --~~lv~E~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfG 201 (488)
.++||||+++|+|.+++.. .....+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEEeecC
Confidence 5999999999999999843 2345699999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccccccccc
Q 011353 202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 202 la~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
+++..... ....+++.|+|||++.+..++.++||||||+++|+|++ |..||............... ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~ 267 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG-----HR 267 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-----CC
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-----CC
Confidence 98765432 22345778999999999899999999999999999999 77776543222111111111 11
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
...+...+..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 268 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 268 LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 123344567899999999999999999999999999988653
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=349.36 Aligned_cols=251 Identities=17% Similarity=0.249 Sum_probs=196.2
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc-HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+..|.+++.||+|+||+||+|.. .+++.||||+++...... ...+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 35788999999999999999995 478999999997543221 1235679999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++ +|.+++... ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 81 YLDK-DLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp CCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 9975 899988753 34699999999999999999999999 9999999999999999999999999998765432
Q ss_pred CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccc-------ccccccc--------
Q 011353 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------TLTDSCL-------- 273 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------~~~~~~~-------- 273 (488)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||.............. .......
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 23456899999999986 5689999999999999999999998876532221111000 0000000
Q ss_pred -----cC----CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 274 -----EG----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 274 -----~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.. ......+.++.+|+.+||+.||.+|||+.++++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00 0012345789999999999999999999999987
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=345.31 Aligned_cols=245 Identities=16% Similarity=0.153 Sum_probs=206.0
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
...|.+++.||+|+||.||++.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 35788889999999999999995 4688999999865422 2345689999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+++++|.+++.. ...+++..++.++.||+.||.|||++ |++||||||+|||++.++.+||+|||++......
T Consensus 120 ~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 120 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp ECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 999999999999865 34699999999999999999999999 9999999999999999999999999999865422
Q ss_pred --CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....+|+.|+|||++.+..++.++|||||||++|+|++|+.||............... ....+...+..+.+
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 270 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAAS 270 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT------CCCCCTTSCHHHHH
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC------CCCCCccCCHHHHH
Confidence 3346789999999999888999999999999999999999988754322211111000 11223345678999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
|+.+||+.||.+|||+.+++++
T Consensus 271 li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 271 LIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999987
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-44 Score=340.58 Aligned_cols=251 Identities=21% Similarity=0.253 Sum_probs=204.7
Q ss_pred Ccccccc-cCCCCCCCeEEEEEe---CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVS-EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
..|.+.+ .||+|+||+||+|.. .++..||||+++..... ..+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4567777 899999999999963 34688999999765322 256799999999999999999999999 6677899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhC-CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999975 34599999999999999999999999 99999999999999999999999999998664432
Q ss_pred -------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 211 -------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
...+++.|+|||++.+..++.++||||||+++|+|+| |+.||............. .......+...+
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 246 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-----KGERMGCPAGCP 246 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTCC
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCC
Confidence 1234678999999998889999999999999999999 998876543322211111 111122344567
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
..+.+++..||+.||.+|||+.++++.|+.+...
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999988643
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=343.94 Aligned_cols=255 Identities=20% Similarity=0.304 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
..|++++.||+|+||.||+|.. .++..||||++..... .....+.+|+.+++.++||||+++++++.+....+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 5678889999999999999983 3467899999975432 33557899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC---CCCeeeecCC
Q 011353 130 LVAEYMPNDTLAKHLFHWET-----QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFG 201 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~DfG 201 (488)
+||||+++++|.+++..... ..+++..++.++.||+.||.|||+. |++||||||+|||++. +..+||+|||
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeecCcCCHhHEEEecCCCcceEEECccc
Confidence 99999999999999976432 3489999999999999999999999 9999999999999984 4569999999
Q ss_pred CccccCC------CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccccccccccc
Q 011353 202 LMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 202 la~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
++..... .....+++.|+|||++.+..++.++|||||||++|+|+| |..||.............. ...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-----~~~ 263 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS-----GGR 263 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-----TCC
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc-----CCC
Confidence 9874322 223456889999999998899999999999999999998 8877765433222111111 111
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
...+...+..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 264 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 264 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 1233445678999999999999999999999999999887654
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=346.47 Aligned_cols=255 Identities=20% Similarity=0.284 Sum_probs=206.9
Q ss_pred CCcccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC-
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD- 126 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~- 126 (488)
...|++++.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.++..+ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 45788889999999999999983 34689999999865432 345689999999999 7999999999987755
Q ss_pred eeEEEEecCCCCCHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
..++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. +++||||||+||+++.+
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEK 184 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGG
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCC
Confidence 48999999999999999975332 1288999999999999999999999 99999999999999999
Q ss_pred CCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccc
Q 011353 193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (488)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|+| |..||.............
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~ 264 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh
Confidence 999999999998654332 2345788999999999999999999999999999998 888776432111100000
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
. .......+...+..+.+++.+||+.||.+|||+.+++++|+.+.+
T Consensus 265 ~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 265 K----EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp H----HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c----cCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 001112233456789999999999999999999999999998864
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-44 Score=347.14 Aligned_cols=250 Identities=16% Similarity=0.173 Sum_probs=189.6
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEe--------eCCe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCC--------EGDE 127 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~--------~~~~ 127 (488)
+|++++.||+|+||.||+|.. .+++.||||++........+.+.+|+.++.++. ||||+++++++. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 678889999999999999994 578999999986655445667899999999996 999999999994 3345
Q ss_pred eEEEEecCCCCCHHhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccCcceeeCCCCCeeeecCCCcc
Q 011353 128 RLLVAEYMPNDTLAKHLFH-WETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
.++||||+. |+|.+++.. ...+.+++..++.++.||+.||.|||+. + ++||||||+|||++.++.+||+|||+++
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 799999996 689998864 2345699999999999999999999998 8 9999999999999999999999999998
Q ss_pred ccCCCC----------------ccccCCCCCCcccc---ccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc
Q 011353 205 NSRDGR----------------SYSTNLAFTPPEYL---RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 265 (488)
Q Consensus 205 ~~~~~~----------------~~~~~~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 265 (488)
...... ...+|+.|+|||++ .+..++.++|||||||++|+|+||+.||.............
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 266 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKY 266 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------C
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCcc
Confidence 654321 23478899999998 45668899999999999999999999886543222111111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
....+...+..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 267 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 267 --------SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp --------CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred --------cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11111223456899999999999999999999999999987644
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=337.99 Aligned_cols=249 Identities=17% Similarity=0.225 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..+.....||+|+||.||+|. ..++..||||.+........+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 344444567999999999999 4668899999998765555677999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-CCCeeeecCCCccccCCC----
Q 011353 136 PNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 136 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~DfGla~~~~~~---- 209 (488)
++++|.+++.... ...+++..+..++.||+.||.|||+. |++|+||||+||+++. ++.+||+|||++......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~ 180 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC-CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc
Confidence 9999999997642 23567899999999999999999999 9999999999999987 899999999999865432
Q ss_pred CccccCCCCCCccccccCC--CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....+++.|+|||++.+.. ++.++||||||+++|+|+||+.||............ ..........+...+..+.+
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 257 (295)
T 2clq_A 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAKA 257 (295)
T ss_dssp CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH---HHHHCCCCCCCTTSCHHHHH
T ss_pred cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh---hccccccccccccCCHHHHH
Confidence 3446789999999997654 788999999999999999999887543211110000 00001112334456788999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+||+.||++|||+.+++++
T Consensus 258 li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 258 FILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHHHTTCSSTTTSCCHHHHHTS
T ss_pred HHHHHccCChhhCCCHHHHhcC
Confidence 9999999999999999999876
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=374.61 Aligned_cols=246 Identities=19% Similarity=0.228 Sum_probs=207.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCC---CCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
...+|++++.||+|+||.||+|.. .+++.||||+++.. .....+.+..|..++..+ +||||+++++++.+.+.++
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 356788999999999999999994 56889999998743 123456688999999988 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC-
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~- 208 (488)
|||||++||+|.+++... +.+++..+..++.||+.||.|||++ +||||||||+||||+.++++||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~-gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT-SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 999999999999999753 4699999999999999999999999 999999999999999999999999999985322
Q ss_pred ---CCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 209 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+....... ...++...+.++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~ 569 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEA 569 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS------CCCCCTTSCHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHH
Confidence 23457899999999999999999999999999999999999999875443332222211 113445577899
Q ss_pred HHHHHHhccCCCCCCCCh-----HHHHHH
Q 011353 286 VRLASRCLQYEPRERPNP-----RSLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~-----~~il~~ 309 (488)
.+||.+||+.||.+||++ .+|++|
T Consensus 570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 570 VAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 999999999999999997 666655
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=337.22 Aligned_cols=247 Identities=16% Similarity=0.148 Sum_probs=206.6
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
...|.+.+.||+|+||.||++.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 35678888999999999999995 4688999999865422 2345688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+++++|.+++.. ...+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 94 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp EECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999999999865 34699999999999999999999999 9999999999999999999999999998865422
Q ss_pred --CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....+|+.|+|||++.+..++.++||||||+++|+|+||+.||............... ....+...+..+.+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 244 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAAS 244 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHH
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc------cCCCccccCHHHHH
Confidence 3346789999999999888999999999999999999999988764332211111100 11233445678999
Q ss_pred HHHHhccCCCCCCCChHHHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
++.+||+.||++|||+.+++++-.
T Consensus 245 li~~~l~~~p~~Rps~~~ll~~~~ 268 (294)
T 2rku_A 245 LIQKMLQTDPTARPTINELLNDEF 268 (294)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred HHHHHcccChhhCcCHHHHhhChh
Confidence 999999999999999999998743
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=361.05 Aligned_cols=247 Identities=19% Similarity=0.184 Sum_probs=203.6
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCC--CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.|++++.||+|+||+||+|.. .+++.||||++... .......+.+|+.+++.++||||+++++++.+....++||||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 102 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEc
Confidence 688899999999999999995 57899999998642 123467799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC---CCCCeeeecCCCccccCCC--
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~DfGla~~~~~~-- 209 (488)
+++|+|.+.+.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++ .++.+||+|||+++.....
T Consensus 103 ~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 999999998865 34699999999999999999999999 999999999999994 5567999999999865543
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||................... ........+..+.+|
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF--DLPQWRTISDDAKDL 256 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS--CSGGGGGSCHHHHHH
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CCcccCCCCHHHHHH
Confidence 34568999999999985 58999999999999999999999987654322221111110000 000112356789999
Q ss_pred HHHhccCCCCCCCChHHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L 310 (488)
+.+||+.||.+|||+.++++|-
T Consensus 257 i~~~L~~dp~~R~t~~~~l~hp 278 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEHP 278 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHCH
T ss_pred HHHHcCCChhhCcCHHHHhcCH
Confidence 9999999999999999999983
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=340.09 Aligned_cols=246 Identities=15% Similarity=0.235 Sum_probs=206.6
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.|.+++.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 467888899999999999994 568899999997553 234677999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Cc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~ 211 (488)
++++|.+++. .+.+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 103 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp TTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9999999995 35699999999999999999999999 9999999999999999999999999998765432 33
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..+|+.|+|||++.+..++.++||||||+++|+|++|+.||............. .......+...+..+.+++.+
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-----KNNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-----HSCCCCCCSSCCHHHHHHHHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh-----cCCCCCCccccCHHHHHHHHH
Confidence 467899999999998899999999999999999999998876532221111100 011112233456789999999
Q ss_pred hccCCCCCCCChHHHHHHHHh
Q 011353 292 CLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~ 312 (488)
||+.||.+|||+.+++++..-
T Consensus 254 ~l~~dp~~Rps~~~ll~~~~~ 274 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKHKFI 274 (303)
T ss_dssp HCCSSGGGSCCHHHHTTCHHH
T ss_pred HcCCChhhCcCHHHHhhChhh
Confidence 999999999999999998543
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-44 Score=347.38 Aligned_cols=246 Identities=19% Similarity=0.226 Sum_probs=199.1
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
..|++++.||+|+||.||+|.. .+++.||||+++..... ..+|++++.++ +||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 3588889999999999999995 56889999999765422 34688888888 799999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC----CCeeeecCCCccccCCC-
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~----~~~kl~DfGla~~~~~~- 209 (488)
++||+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||+.+. +.+||+|||+++.....
T Consensus 98 ~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~-givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 98 MKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 999999999965 45699999999999999999999999 99999999999998433 35999999999865432
Q ss_pred ---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh---hHHHhhccccccccccccCCCChHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....+|+.|+|||++.+..++.++|||||||++|+|++|..||.... ...+......... ..........+.
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~ 252 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF--SLSGGYWNSVSD 252 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCC--CCCSTTTTTSCH
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCc--ccCccccccCCH
Confidence 23467899999999988778999999999999999999999886421 1111111000000 011122234678
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.+.+|+.+||..||.+|||+.++++|-.
T Consensus 253 ~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 253 TAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 8999999999999999999999998743
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-44 Score=341.28 Aligned_cols=248 Identities=18% Similarity=0.220 Sum_probs=199.3
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
..|++++.||+|+||.||+|.. .++..||+|++..........+.+|+.++..++||||+++++++.+.+..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 4678889999999999999995 468899999998766666788999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc----CCCCc
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RDGRS 211 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~----~~~~~ 211 (488)
++++|.+++... ...+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||++... .....
T Consensus 99 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (302)
T 2j7t_A 99 PGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176 (302)
T ss_dssp TTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred CCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence 999999998652 34599999999999999999999999 9999999999999999999999999987532 12234
Q ss_pred cccCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 212 YSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 212 ~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
..+|+.|+|||++. +..++.++||||||+++|+|++|..||................. .....+...+..+.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~ 253 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP---PTLLTPSKWSVEFR 253 (302)
T ss_dssp --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCSSGGGSCHHHH
T ss_pred ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCC---cccCCccccCHHHH
Confidence 56889999999984 56789999999999999999999988765432211111100000 01112344567899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++.+||+.||.+|||+.+++++
T Consensus 254 ~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 254 DFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHHHHcccChhhCCCHHHHhcC
Confidence 99999999999999999998875
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=345.04 Aligned_cols=249 Identities=16% Similarity=0.126 Sum_probs=202.7
Q ss_pred ccccc-ccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEE
Q 011353 58 MENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 58 ~~~~i-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.|.++ +.||+|+||.||+|.. .+++.||||++.... ......+.+|+.++..+ .||||+++++++.+.+..++||
T Consensus 29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~ 108 (327)
T 3lm5_A 29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILIL 108 (327)
T ss_dssp HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEE
Confidence 34555 6789999999999994 568999999997543 23367799999999999 5799999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC---CCCeeeecCCCccccCCC
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~DfGla~~~~~~ 209 (488)
||+++|+|.+++.......+++..++.++.||+.||.|||+. |++||||||+|||++. ++.+||+|||+++.....
T Consensus 109 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~-givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 109 EYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp ECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 999999999999765556799999999999999999999999 9999999999999987 789999999999876543
Q ss_pred ---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
....+|+.|+|||++.+..++.++|||||||++|+|++|+.||................. ..........+..+.
T Consensus 188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~ 265 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV--DYSEETFSSVSQLAT 265 (327)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTTTTTSCHHHH
T ss_pred cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccc--ccCchhhcccCHHHH
Confidence 334689999999999999999999999999999999999998876533222111111101 011122234567899
Q ss_pred HHHHHhccCCCCCCCChHHHHHH
Q 011353 287 RLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++.+||+.||.+|||+.+++++
T Consensus 266 ~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 266 DFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHHcCCChhhCcCHHHHhCC
Confidence 99999999999999999999987
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-43 Score=336.33 Aligned_cols=248 Identities=18% Similarity=0.169 Sum_probs=201.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC----CccHHHHHHHHHHHhccCCCCcccEEEEEe--eCCee
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCC--EGDER 128 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 128 (488)
..+|++++.||+|+||.||++.. .+++.||||+++... ......+.+|+.+++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 35788889999999999999994 578899999997532 223567999999999999999999999984 45678
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++||||++++ |.+++.......+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 9999999876 88888765566799999999999999999999999 999999999999999999999999999876543
Q ss_pred C------CccccCCCCCCccccccCC--CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChH
Q 011353 209 G------RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (488)
Q Consensus 209 ~------~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
. ....+|+.|+|||++.+.. .+.++||||||+++|+|++|+.||............... ....+..
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------~~~~~~~ 235 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------SYAIPGD 235 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------CCCCCSS
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------CCCCCCc
Confidence 2 2345789999999998654 377999999999999999999988765332222111111 0122334
Q ss_pred HHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 281 EGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 281 ~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.+..+.+++.+||+.||.+|||+.+++++-.
T Consensus 236 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 266 (305)
T 2wtk_C 236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSW 266 (305)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHSHH
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence 5678999999999999999999999998743
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=343.62 Aligned_cols=252 Identities=17% Similarity=0.209 Sum_probs=198.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEee-------
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE------- 124 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 124 (488)
..++|++++.||+|+||+||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++.+
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 356889999999999999999995 6789999999865432 234578899999999999999999999987
Q ss_pred -CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 125 -~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
.+..++||||+++ +|.+.+... ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccCC-CHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4468999999976 788877653 34699999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCC--------CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-------ccc
Q 011353 204 KNSRDG--------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------IQT 267 (488)
Q Consensus 204 ~~~~~~--------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------~~~ 267 (488)
+..... ....+|+.|+|||++.+. .++.++|||||||++|+|+||+.||............ ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 764321 234568999999999864 5899999999999999999999888754322111100 000
Q ss_pred ccccc-----------ccCC-CC--h-----HHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 LTDSC-----------LEGQ-FS--S-----DEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 ~~~~~-----------~~~~-~~--~-----~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... .... .. . ..++.+.+|+.+||+.||.+|||+.++++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000 0000 00 0 014568999999999999999999999987
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=338.12 Aligned_cols=251 Identities=16% Similarity=0.212 Sum_probs=204.5
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEee--CCeeEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL 130 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 130 (488)
..+|++++.||+|+||.||++.. .+++.||+|++...... ..+.+.+|+.++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 45788899999999999999995 57899999999754322 34568999999999999999999998854 578999
Q ss_pred EEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCC-----cccccccCcceeeCCCCCeeeecCCCc
Q 011353 131 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-----iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
||||+++++|.+++... ....+++..++.++.|++.||.|||+. + ++|+||||+||+++.++.+||+|||++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-C------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc-cCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 99999999999999642 234599999999999999999999998 7 999999999999999999999999998
Q ss_pred cccCCCC----ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCCh
Q 011353 204 KNSRDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (488)
Q Consensus 204 ~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
+...... ...+++.|+|||++.+..++.++||||||+++|+|+||+.||............... .....+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~ 238 (279)
T 2w5a_A 164 RILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIPY 238 (279)
T ss_dssp HHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----CCCCCCT
T ss_pred eeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc-----ccccCCc
Confidence 8765432 235789999999999888999999999999999999999888754332221111111 1112334
Q ss_pred HHHHHHHHHHHHhccCCCCCCCChHHHHHHHHh
Q 011353 280 DEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (488)
Q Consensus 280 ~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 312 (488)
..+..+.+++.+||+.||.+|||+.++++++..
T Consensus 239 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 466789999999999999999999999987653
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=336.34 Aligned_cols=253 Identities=17% Similarity=0.203 Sum_probs=205.1
Q ss_pred cccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCc------cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.|++++.||+|+||.||++... +++.||||+++..... ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 5778889999999999999954 6899999998754321 36779999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC----CeeeecCCCcccc
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 206 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~DfGla~~~ 206 (488)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+. +++|+||||+||+++.++ .+||+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999965 34699999999999999999999999 999999999999998777 8999999999876
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
... ....+++.|+|||++.+..++.++||||||+++|+|++|..||.................. .........+.
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 240 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD--FDEEYFSNTSE 240 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC--CcchhcccCCH
Confidence 443 2345789999999999889999999999999999999999988764332221111000000 00001122456
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH--HHhhhc
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA--LVTLQK 315 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~~ 315 (488)
.+.+++.+||+.||.+|||+.+++++ ++.+..
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 79999999999999999999999986 555544
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=342.94 Aligned_cols=244 Identities=18% Similarity=0.205 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEee--CCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCE--GDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~ 132 (488)
.+|++++.||+|+||+||+|. ..+++.||||+++.. ..+.+.+|+.+++.++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 578899999999999999998 467899999999743 3567999999999997 9999999999987 66789999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-CeeeecCCCccccCCC--
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~DfGla~~~~~~-- 209 (488)
||+++++|.+++. .+++..+..++.||+.||.|||+. |++||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 9999999999984 389999999999999999999999 999999999999999776 8999999999865433
Q ss_pred -CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhH--H----------------Hhhcc-----
Q 011353 210 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD--L----------------IRDRN----- 264 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~--~----------------~~~~~----- 264 (488)
....++..|+|||++.+ ..++.++|||||||++|+|++|+.||...... . +....
T Consensus 187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence 34467889999999987 56899999999999999999999888432110 0 00000
Q ss_pred ---------ccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 265 ---------IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 265 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.............+...+..+.+|+.+||+.||.+|||+.++++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000111112223357889999999999999999999999987
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=354.88 Aligned_cols=260 Identities=13% Similarity=0.134 Sum_probs=209.6
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCC--eeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 132 (488)
..|.+.+.||+|+||+||+|.. .+++.||||+++... ....+.+.+|+.+++.++||||+++++++.+.+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 4688889999999999999995 458999999997543 234567889999999999999999999998765 679999
Q ss_pred ecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee----CCCCCeeeecCCCccccC
Q 011353 133 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~DfGla~~~~ 207 (488)
||+++|+|.+++.... ...+++..++.++.||+.||.|||+. ||+||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999999997532 23399999999999999999999999 99999999999999 777889999999998765
Q ss_pred CC---CccccCCCCCCcccccc--------CCCCCCccchhhHHHHHHHHhCCCCCCchh-----hH---HHhhcccccc
Q 011353 208 DG---RSYSTNLAFTPPEYLRT--------GRVTPESVMYSFGTLLLDLLSGKHIPPSHA-----LD---LIRDRNIQTL 268 (488)
Q Consensus 208 ~~---~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-----~~---~~~~~~~~~~ 268 (488)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.... .. .+..+.....
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 43 24468999999999875 457789999999999999999998875311 11 1111111000
Q ss_pred c---------------cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 269 T---------------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 269 ~---------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+ ............+..+.+++..||+.||++|||+.++++.+..+....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 0 000112344678889999999999999999999999999999887653
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-44 Score=341.12 Aligned_cols=254 Identities=18% Similarity=0.269 Sum_probs=187.3
Q ss_pred CCCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
....|++++.||+|+||.||+|. ..+++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 34678889999999999999999 4578899999987543 233556889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 133 EYMPNDTLAKHLFH------WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 133 E~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
||+++++|.+++.. .....+++..++.++.||+.||.|||+. |++||||||+||+++.++.+||+|||++...
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 99999999999863 1245689999999999999999999999 9999999999999999999999999998754
Q ss_pred CCC---------CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHh----hcccccccccc
Q 011353 207 RDG---------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----DRNIQTLTDSC 272 (488)
Q Consensus 207 ~~~---------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~ 272 (488)
... ....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||......... ...........
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 251 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGV 251 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC--
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccccc
Confidence 322 23457899999999876 56899999999999999999999888653221111 11111111111
Q ss_pred ccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.........+..+.+++.+||+.||.+|||+.+++++
T Consensus 252 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 252 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ---CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1112223456789999999999999999999999986
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=336.05 Aligned_cols=245 Identities=18% Similarity=0.244 Sum_probs=198.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEee----CCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~ 129 (488)
..|++.+.||+|+||+||+|.. .++..||+|++..... ...+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 3467778899999999999994 5688999999875432 235568999999999999999999999875 35689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccCcceeeC-CCCCeeeecCCCcccc
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNS 206 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--iiH~Dlkp~Nill~-~~~~~kl~DfGla~~~ 206 (488)
+||||+++++|.+++.. ...+++..++.++.||+.||.|||+. + ++|+||||+|||++ .++.+||+|||++...
T Consensus 106 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999999965 35689999999999999999999998 8 99999999999997 8899999999999765
Q ss_pred CCC--CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhH-HHhhccccccccccccCCCChHHHH
Q 011353 207 RDG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 207 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
... ....+|+.|+|||++. +.++.++|||||||++|+|++|+.||...... ............. ..+...++
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 257 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA----SFDKVAIP 257 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG----GGGGCCCH
T ss_pred cccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc----ccCCCCCH
Confidence 543 2346899999999887 56999999999999999999999988653211 1111111111111 11222346
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+++.+||+.||.+|||+.+++++
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhC
Confidence 79999999999999999999999986
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=356.10 Aligned_cols=250 Identities=17% Similarity=0.195 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc------CCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL------RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~~ 129 (488)
.+|++++.||+|+||+||+|. ..+++.||||+++... .....+.+|+.++..+ .|+||+++++++...+..+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 358888999999999999998 4568999999997542 2345678888888887 4679999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC--eeeecCCCccccC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNSR 207 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--~kl~DfGla~~~~ 207 (488)
+||||+. ++|.+++.......+++..+..++.||+.||.|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH-TEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 9999996 5899999876656799999999999999999999999 9999999999999999887 9999999997655
Q ss_pred CC-CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-------ccc----------cc
Q 011353 208 DG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------IQT----------LT 269 (488)
Q Consensus 208 ~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------~~~----------~~ 269 (488)
.. ....+|+.|+|||++.+..++.++|||||||++|||+||..||............ ... .+
T Consensus 254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~ 333 (429)
T 3kvw_A 254 QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFV 333 (429)
T ss_dssp CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHB
T ss_pred CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhcc
Confidence 43 3457899999999999999999999999999999999999888754321110000 000 00
Q ss_pred cc--------------------------------ccc----CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 DS--------------------------------CLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 ~~--------------------------------~~~----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+. ... ...+...++.+.+|+.+||+.||++|||+.++++|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~H 409 (429)
T 3kvw_A 334 SSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRH 409 (429)
T ss_dssp CTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCC
Confidence 00 000 00011125679999999999999999999999987
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-43 Score=337.94 Aligned_cols=247 Identities=15% Similarity=0.187 Sum_probs=200.6
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
...|++++.||+|+||.||+|.. .+++.||||.+.... ....+.+|+.++..++||||+++++++.+.+..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 35678889999999999999995 468999999997643 456789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+++++|.+++.. ....+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++...... .
T Consensus 106 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 106 CGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp CTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 999999999863 245699999999999999999999998 9999999999999999999999999998765432 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...+++.|+|||++.+..++.++||||||+++|+|++|+.||............ ..... .....+...+..+.+++.
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~l~~li~ 260 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI-PTNPP--PTFRKPELWSDNFTDFVK 260 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSCC--CCCSSGGGSCHHHHHHHH
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hcCCC--cccCCcccCCHHHHHHHH
Confidence 346789999999999888999999999999999999999888653221111000 00000 001123345678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||+.||.+|||+.+++++
T Consensus 261 ~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 261 QCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HHTCSCTTTSCCHHHHTTS
T ss_pred HHccCChhhCcCHHHHHhC
Confidence 9999999999999999986
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=360.54 Aligned_cols=246 Identities=16% Similarity=0.185 Sum_probs=199.2
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.|++++.||+|+||+||+|.. .++..||||++.... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 588899999999999999995 578899999997543 23356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC---CCCeeeecCCCccccCCC--
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~DfGla~~~~~~-- 209 (488)
+++|+|.+++.. ...+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.+||+|||+++.....
T Consensus 118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 999999998865 34699999999999999999999999 9999999999999975 455999999999875543
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
....||+.|+|||++. ..++.++|||||||++|+|++|..||................... ........+..+.+|
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTF--DSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CchhcccCCHHHHHH
Confidence 3456899999999987 569999999999999999999999987654332222111111000 000012346789999
Q ss_pred HHHhccCCCCCCCChHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~ 309 (488)
+.+||+.||.+|||+.++++|
T Consensus 272 i~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHCCCChhhCccHHHHhcC
Confidence 999999999999999999987
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=333.58 Aligned_cols=247 Identities=17% Similarity=0.131 Sum_probs=201.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.+|++++.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 4678888999999999999995 4789999999864432 3356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC------
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------ 208 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~------ 208 (488)
+++++|.+++.. ...+++..+..++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 999999999964 34699999999999999999999998 999999999999999999999999999875432
Q ss_pred CCccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 209 GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 209 ~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
.....+++.|+|||++.+..+ +.++||||||+++|+|++|+.||............ +.............+..+.+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 240 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAPLA 240 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH---HHTTCTTSTTGGGSCHHHHH
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---hhhcccccCchhhcCHHHHH
Confidence 234467899999999987665 77899999999999999999988653211000000 00000000112345678999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+||+.||.+|||+.+++++
T Consensus 241 li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 241 LLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHCCCCchhCCCHHHHhcC
Confidence 9999999999999999999876
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=345.94 Aligned_cols=252 Identities=19% Similarity=0.192 Sum_probs=196.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc-----HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
...|++++.||+|+||.||+|.. .+|+.||||+++...... .+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 45678888899999999999994 568999999997533211 246889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++ +|.+++... ...+++..+..++.|++.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 89 lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 99999986 899888653 34689999999999999999999999 9999999999999999999999999999865432
Q ss_pred ----CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccc--------cccc------
Q 011353 210 ----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------TLTD------ 270 (488)
Q Consensus 210 ----~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------~~~~------ 270 (488)
....+|+.|+|||++.+. .++.++|||||||++|+|++|..||.............. .+.+
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence 335678999999999764 488999999999999999999988765432211110000 0000
Q ss_pred ccccCC---C-----ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 271 SCLEGQ---F-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 271 ~~~~~~---~-----~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
...... . ....+..+.+|+.+||+.||.+|||+.+++++-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000000 0 123457899999999999999999999999873
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=362.45 Aligned_cols=247 Identities=18% Similarity=0.147 Sum_probs=205.3
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.|++++.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 578889999999999999995 578999999986543 2346779999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee---CCCCCeeeecCCCccccCCCC
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~DfGla~~~~~~~ 210 (488)
|+.+|+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||+ +.++.+||+|||+++......
T Consensus 107 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 107 VYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred cCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 9999999999965 45699999999999999999999999 99999999999999 567899999999998765443
Q ss_pred ---ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 211 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
...+|+.|+|||++.+ .++.++|||||||++|+|++|..||................... ........+..+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~ 260 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF--ELPQWKKVSESAKD 260 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CSGGGGGSCHHHHH
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC--CCcccccCCHHHHH
Confidence 3468999999999875 79999999999999999999999987653322221111110000 00011245678999
Q ss_pred HHHHhccCCCCCCCChHHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~L 310 (488)
|+.+||+.||.+|||+.++++|-
T Consensus 261 li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 261 LIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSH
T ss_pred HHHHHCCCChhHCcCHHHHhhCh
Confidence 99999999999999999999983
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=361.54 Aligned_cols=248 Identities=15% Similarity=0.149 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-------------ccHHHHHHHHHHHhccCCCCcccEEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-------------PDARQFLEEARAVGQLRNRRLANLLGCC 122 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~~~~ 122 (488)
..|.+++.||+|+||+||+|.. .++..||||++..... ...+.+.+|+.+++.++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 4688899999999999999994 5688999999975432 2346789999999999999999999999
Q ss_pred eeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC---Ceeeec
Q 011353 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSC 199 (488)
Q Consensus 123 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~D 199 (488)
.+....++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999999865 34699999999999999999999999 999999999999998775 699999
Q ss_pred CCCccccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCC
Q 011353 200 FGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (488)
Q Consensus 200 fGla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
||+++..... ....||+.|+|||++. +.++.++|||||||++|+|++|..||..................... .
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~--~ 269 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF--N 269 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH--H
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc--c
Confidence 9999876543 3456899999999987 56899999999999999999999998765433222211111000000 0
Q ss_pred CChHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
.....+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 270 ~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 270 DWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 0022467899999999999999999999999883
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=355.98 Aligned_cols=249 Identities=16% Similarity=0.189 Sum_probs=193.9
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeC-----Cee
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 128 (488)
.+|.+++.||+|+||.||+|. ..+++.||||+++.... ...+++.+|+.+|+.++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 468888999999999999999 45688999999975432 2356789999999999999999999999776 568
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++||||+. |+|.+++.. ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999996 599999964 45699999999999999999999999 999999999999999999999999999986543
Q ss_pred C--------------------------CccccCCCCCCcccc-ccCCCCCCccchhhHHHHHHHHhCCCCC---------
Q 011353 209 G--------------------------RSYSTNLAFTPPEYL-RTGRVTPESVMYSFGTLLLDLLSGKHIP--------- 252 (488)
Q Consensus 209 ~--------------------------~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg~~p~--------- 252 (488)
. ....+|+.|+|||++ .+..++.++|||||||++|||++|..|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p 261 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence 2 345679999999986 4556999999999999999999854333
Q ss_pred --Cchh------------------hHHHh------------------hccccccccccc-cCCC-----ChHHHHHHHHH
Q 011353 253 --PSHA------------------LDLIR------------------DRNIQTLTDSCL-EGQF-----SSDEGTELVRL 288 (488)
Q Consensus 253 --~~~~------------------~~~~~------------------~~~~~~~~~~~~-~~~~-----~~~~~~~l~~l 288 (488)
++.. .+.+. .......+.... .... .+..++.+.+|
T Consensus 262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 341 (432)
T 3n9x_A 262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341 (432)
T ss_dssp SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence 2210 00000 000000000000 0000 02356789999
Q ss_pred HHHhccCCCCCCCChHHHHHH
Q 011353 289 ASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~ 309 (488)
+.+||+.||.+|||+.++++|
T Consensus 342 l~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 342 LESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp HHHHSCSSTTTSCCHHHHHTC
T ss_pred HHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999987
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=354.18 Aligned_cols=249 Identities=17% Similarity=0.188 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCC-CCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~E~ 134 (488)
..|++++.||+|+||.||+|.. .+++.||||++..... ..++.+|+.++..++| ++|+.+..++...+..+|||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 4678889999999999999994 6789999999875442 2358899999999976 6677777777888899999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee---CCCCCeeeecCCCccccCCCC-
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~DfGla~~~~~~~- 210 (488)
+ +++|.+++... ...+++..++.|+.||+.||.|||++ +||||||||+|||| +.++.+||+|||+++......
T Consensus 85 ~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 89999999653 34699999999999999999999999 99999999999999 688999999999998654321
Q ss_pred ----------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh-------HHHhhccccccccccc
Q 011353 211 ----------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNIQTLTDSCL 273 (488)
Q Consensus 211 ----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------~~~~~~~~~~~~~~~~ 273 (488)
...+|+.|+|||++.+..++.++|||||||+||||++|+.||..... ..+............
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l- 240 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL- 240 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHH-
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHH-
Confidence 45689999999999999999999999999999999999999865211 111111111111110
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
...++.++.+|+..||+.+|++||++.+|++.|+.+..
T Consensus 241 ----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 241 ----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp ----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred ----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 11235689999999999999999999999999998854
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=346.20 Aligned_cols=246 Identities=12% Similarity=0.136 Sum_probs=202.6
Q ss_pred CcccccccCCCCCCCeEEEEE------eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC---CCCcccEEEEEeeCCe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK------LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~ 127 (488)
..|.+++.||+|+||+||+|. ..+++.||||+++.. ....+.+|+.++..++ |+||+++++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 567888889999999999993 456889999999754 3567888888888886 9999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-----------CC
Q 011353 128 RLLVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----------DV 193 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-----------~~ 193 (488)
.++||||+++|+|.+++... ....+++..++.|+.||+.||.|||+. +||||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC-EIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999999642 245699999999999999999999998 9999999999999988 89
Q ss_pred CeeeecCCCccccC---CC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccc
Q 011353 194 NPRLSCFGLMKNSR---DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 267 (488)
Q Consensus 194 ~~kl~DfGla~~~~---~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 267 (488)
.+||+|||+++... .. ....||+.|+|||++.+..++.++|||||||++|||+||+.||....... ..
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~--- 294 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE---CK--- 294 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---EE---
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---ee---
Confidence 99999999996532 11 34568999999999999899999999999999999999998875432110 00
Q ss_pred cccccccCCCChHHHHHHHHHHHHhccCCCCCC-CChHHHHHHHHhhhcC
Q 011353 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER-PNPRSLVTALVTLQKD 316 (488)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R-ps~~~il~~L~~~~~~ 316 (488)
...... .. ..+..+.+++..||..+|.+| |++.++.+.|+.+...
T Consensus 295 -~~~~~~-~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 -PEGLFR-RL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -ECSCCT-TC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -echhcc-cc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 111111 11 135678999999999999999 6788888888877543
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-43 Score=334.95 Aligned_cols=253 Identities=15% Similarity=0.157 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEE-eeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCC-CEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~E~ 134 (488)
..|++++.||+|+||.||+|.. .+++.||||++..... ...+.+|+.+++.++|++++..+..+ ...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 4678888899999999999994 6789999999875542 34688999999999987766555554 667788999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee---CCCCCeeeecCCCccccCCC--
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~DfGla~~~~~~-- 209 (488)
+ +++|.+++... ...+++..++.++.||+.||.|||++ +++||||||+|||+ +.++.+||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 87 L-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 9 89999999643 34699999999999999999999999 99999999999999 48899999999998765432
Q ss_pred ---------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh-------HHHhhccccccccccc
Q 011353 210 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNIQTLTDSCL 273 (488)
Q Consensus 210 ---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------~~~~~~~~~~~~~~~~ 273 (488)
....+|+.|+|||++.+..++.++|||||||++|+|+||+.||..... ..+......... .
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~-- 240 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-E-- 240 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-H--
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-H--
Confidence 234678999999999998999999999999999999999998864211 111111110000 0
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCCC
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~~ 319 (488)
......+..+.+++..||+.||.+|||+.++++.|+.+......
T Consensus 241 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 241 --VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp --HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred --HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 01123457899999999999999999999999999998766543
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-44 Score=349.37 Aligned_cols=248 Identities=18% Similarity=0.229 Sum_probs=183.2
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeC------Ce
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 127 (488)
..|++++.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 468889999999999999999 56789999999975432 2355788999999999999999999998654 56
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++|+||+ +++|.+++.. +.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 7799998853 5699999999999999999999998 99999999999999999999999999998754
Q ss_pred CC-CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc-------cc-----------
Q 011353 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------QT----------- 267 (488)
Q Consensus 208 ~~-~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------~~----------- 267 (488)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||++........... ..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 43 44578999999999987 678999999999999999999999987643211100000 00
Q ss_pred -ccccc---ccCC---CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 -LTDSC---LEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 -~~~~~---~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... .... .....++.+.+|+.+||+.||.+|||+.++++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000 0000 011235779999999999999999999999987
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-44 Score=350.71 Aligned_cols=251 Identities=17% Similarity=0.205 Sum_probs=202.5
Q ss_pred CCcccccccCCCCCCCeEEEEEe----CCCCEEEEEEcCCCCC----ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 126 (488)
...|++++.||+|+||.||++.. .+++.||||+++.... .....+.+|+.++..+ +||||+++++++.+.+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 45788899999999999999996 4689999999975321 2345577899999999 6999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999999999975 34699999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC-----CccccCCCCCCccccccC--CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCCh
Q 011353 207 RDG-----RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (488)
Q Consensus 207 ~~~-----~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||...............+.. ....++.
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~ 287 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQ 287 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCT
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCCc
Confidence 332 234689999999999863 4788999999999999999999988643211000000000000 1122344
Q ss_pred HHHHHHHHHHHHhccCCCCCCC-----ChHHHHHHHH
Q 011353 280 DEGTELVRLASRCLQYEPRERP-----NPRSLVTALV 311 (488)
Q Consensus 280 ~~~~~l~~li~~cl~~~p~~Rp-----s~~~il~~L~ 311 (488)
..+..+.+|+.+||..||.+|| |+.+++++..
T Consensus 288 ~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 288 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 5667899999999999999999 8999998743
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=346.45 Aligned_cols=248 Identities=15% Similarity=0.177 Sum_probs=192.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCC------e
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 127 (488)
..|++++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 5788889999999999999994 5688999999975432 23456889999999999999999999997665 7
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+++ +|.+++. ..+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCSE-EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCCC-CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 8999999975 7888884 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccc----------------
Q 011353 208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---------------- 268 (488)
Q Consensus 208 ~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---------------- 268 (488)
.. ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.............+
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 43 34567999999999999899999999999999999999999887543211111000000
Q ss_pred -----------------ccccccCC---CChHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 269 -----------------TDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 269 -----------------~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
........ .....+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 00000000 0112367899999999999999999999999983
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=359.60 Aligned_cols=240 Identities=15% Similarity=0.115 Sum_probs=189.8
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC---CCccHHHHHHHH---HHHhccCCCCcccEE-------EEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEA---RAVGQLRNRRLANLL-------GCC 122 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~~ 122 (488)
..|.+++.||+|+||+||+|. ..+|+.||||++... .....+.+.+|+ .+++.++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 457778899999999999999 567999999999743 223456789999 455556799999998 666
Q ss_pred eeCCe-----------------eEEEEecCCCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 011353 123 CEGDE-----------------RLLVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYH 180 (488)
Q Consensus 123 ~~~~~-----------------~~lv~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~ 180 (488)
.+.+. .++||||+ +|+|.+++.... ...+++..++.|+.||+.||.|||++ ||+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHr 230 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHT 230 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT-TEECS
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecC
Confidence 65532 78999999 679999997521 11234588899999999999999999 99999
Q ss_pred cccCcceeeCCCCCeeeecCCCccccCCC-CccccCCCCCCccccccC-----------CCCCCccchhhHHHHHHHHhC
Q 011353 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTG-----------RVTPESVMYSFGTLLLDLLSG 248 (488)
Q Consensus 181 Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~el~tg 248 (488)
||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||+||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999875543 23456 999999999987 799999999999999999999
Q ss_pred CCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 249 KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 249 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+.||....... ....+... ....+..+.+|+.+||+.||.+|||+.+++++
T Consensus 310 ~~Pf~~~~~~~----~~~~~~~~------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 310 DLPITKDAALG----GSEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp SCCC------C----CSGGGGSS------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred CCCCccccccc----chhhhhhh------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 98886542211 11111111 12345789999999999999999999999985
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=343.01 Aligned_cols=253 Identities=15% Similarity=0.201 Sum_probs=202.1
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhc--cCCCCcccEEEEEeeCC----eeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEGD----ERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv 131 (488)
.|.+++.||+|+||.||+|.. +++.||||+++.. ....+.+|++++.. ++||||+++++++.... ..++|
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred cEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 567778889999999999998 5789999999643 35668889999887 68999999999998876 78999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT--------SKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
|||+++|+|.+++.. ..+++..++.++.|++.||.||| +. +++||||||+|||++.++.+||+|||++
T Consensus 119 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC-CeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 999999999999964 35999999999999999999999 77 9999999999999999999999999998
Q ss_pred cccCCC--------CccccCCCCCCccccccCC------CCCCccchhhHHHHHHHHhC----------CCCCCchh---
Q 011353 204 KNSRDG--------RSYSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSG----------KHIPPSHA--- 256 (488)
Q Consensus 204 ~~~~~~--------~~~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~tg----------~~p~~~~~--- 256 (488)
...... ....+|+.|+|||++.+.. ++.++|||||||++|||+|| ..||....
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 765432 2346789999999998653 33689999999999999999 55654321
Q ss_pred --hHHHhhccccccccccccCC-CChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 257 --LDLIRDRNIQTLTDSCLEGQ-FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
...+..........+..... .....+..+.+|+.+||+.||++|||+.+++++|+.+.+...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 275 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 11111111111111111100 123567889999999999999999999999999999977643
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=351.93 Aligned_cols=243 Identities=15% Similarity=0.174 Sum_probs=190.3
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--------ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 127 (488)
..|.+++.||+|+||+||+|. ..+++.||||++..... .....+.+|+.+|++++||||+++++++. .+.
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCc
Confidence 457788889999999999999 45689999999864321 11224889999999999999999999985 456
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC---CCeeeecCCCcc
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMK 204 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~DfGla~ 204 (488)
.++||||+++|+|.+++.. .+.+++..+..++.||+.||.|||++ +++||||||+|||++.+ +.+||+|||+++
T Consensus 214 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred eEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCCCcceEEEeecccce
Confidence 8999999999999999864 45699999999999999999999999 99999999999999654 459999999998
Q ss_pred ccCCC---CccccCCCCCCcccccc---CCCCCCccchhhHHHHHHHHhCCCCCCchhh-----HHHhhccccccccccc
Q 011353 205 NSRDG---RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNIQTLTDSCL 273 (488)
Q Consensus 205 ~~~~~---~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~ 273 (488)
..... ....||+.|+|||++.+ ..++.++|||||||++|+|+||..||..... ..+....... ...
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~-~~~-- 367 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF-IPE-- 367 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCC-CHH--
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCC-Cch--
Confidence 76543 34568999999999864 5678899999999999999999998864321 1111111100 000
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.....+..+.+|+.+||+.||.+|||+.++++|
T Consensus 368 ---~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 368 ---VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp ---HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---hhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 011246789999999999999999999999987
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=332.82 Aligned_cols=245 Identities=18% Similarity=0.246 Sum_probs=198.9
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
...|.+.+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 45788889999999999999995 478999999986432 22356789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+++++|.+++.. ...+++..+..++.||+.||.|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 90 MEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 999999999999975 34589999999999999999999999 9999999999999999999999999998876543
Q ss_pred -CccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....+++.|+|||++.+..+ +.++||||||+++|+|++|+.||............... ....+...+..+.+
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~ 240 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG------VFYIPEYLNRSVAT 240 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC------cccCchhcCHHHHH
Confidence 23457899999999987765 67999999999999999999988754332222111111 01123345678999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+||+.||.+|||+.+++++
T Consensus 241 li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCChhhCCCHHHHHhC
Confidence 9999999999999999999997
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=371.11 Aligned_cols=243 Identities=21% Similarity=0.245 Sum_probs=200.1
Q ss_pred cCCCCCCCeEEEEEe---CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 64 EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
+||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+.+|+.++|||||++++++.. +..++||||+++|
T Consensus 376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g 454 (635)
T 4fl3_A 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG 454 (635)
T ss_dssp EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCC
Confidence 689999999999964 3467899999976432 235779999999999999999999999964 5688999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-------c
Q 011353 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S 211 (488)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~-------~ 211 (488)
+|.+++.. ...+++..++.|+.||+.||.|||++ +||||||||+|||++.++.+||+|||+++...... .
T Consensus 455 ~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 531 (635)
T 4fl3_A 455 PLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531 (635)
T ss_dssp EHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred CHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence 99999965 45699999999999999999999999 99999999999999999999999999998654322 2
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..+|+.|+|||++.+..++.++|||||||++|||+| |+.||............. .......+..++.++.+||.
T Consensus 532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~li~ 606 (635)
T 4fl3_A 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-----KGERMGCPAGCPREMYDLMN 606 (635)
T ss_dssp ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTCCHHHHHHHH
T ss_pred CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHHHHHHHH
Confidence 234678999999999999999999999999999998 998887643332221111 11122234456788999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhhhc
Q 011353 291 RCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.||+.||++|||+.+|++.|+.+..
T Consensus 607 ~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 607 LCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp HHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 9999999999999999999987643
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-43 Score=338.80 Aligned_cols=248 Identities=14% Similarity=0.194 Sum_probs=198.5
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEee------CCe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE------GDE 127 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~------~~~ 127 (488)
...|++++.||+|+||.||+|.. .+++.||||++.... .....+.+|+.++..+ +||||+++++++.. .+.
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 45678888999999999999995 578999999997543 3456789999999999 79999999999987 467
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+++|+|.+++.......+++..+..++.||+.||.|||+. |++|+||||+|||++.++.+||+|||++....
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 89999999999999999765556799999999999999999999999 99999999999999999999999999987654
Q ss_pred CC----CccccCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC
Q 011353 208 DG----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (488)
Q Consensus 208 ~~----~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
.. ....+|+.|+|||++. +..++.++|||||||++|+|+||..||............ .........+
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~ 256 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----PRNPAPRLKS 256 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHSCCCCCSC
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh----hcCccccCCc
Confidence 32 3346789999999987 466899999999999999999999888653221111100 0000111112
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 279 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
...+..+.+++.+||..||.+|||+.+++++
T Consensus 257 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 3356789999999999999999999999986
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=354.62 Aligned_cols=249 Identities=13% Similarity=0.045 Sum_probs=184.1
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhcc--CCCCcccEE-------EEEee
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQL--RNRRLANLL-------GCCCE 124 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l--~h~niv~l~-------~~~~~ 124 (488)
.|.+++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.++..| +||||++++ +++..
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 477888999999999999994 57899999999875432 244577785545444 699988755 45543
Q ss_pred C-----------------CeeEEEEecCCCCCHHhhhccCCCCCCCHHHH------HHHHHHHHHHHHHhhcCCCccccc
Q 011353 125 G-----------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMR------LRVALHIAEALEYCTSKERALYHD 181 (488)
Q Consensus 125 ~-----------------~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~qi~~~L~~LH~~~~iiH~D 181 (488)
. ...++||||++ |+|.+++.... ..+++..+ ..++.||+.||.|||++ ||+|||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-~ivHrD 219 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHGH 219 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-TEEETT
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC-CCccCc
Confidence 3 33799999998 79999997532 23455556 78889999999999999 999999
Q ss_pred ccCcceeeCCCCCeeeecCCCccccCCCC-ccccCCCCCCcccccc--CCCCCCccchhhHHHHHHHHhCCCCCCchhhH
Q 011353 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD 258 (488)
Q Consensus 182 lkp~Nill~~~~~~kl~DfGla~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 258 (488)
|||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||......
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 99999999999999999999998776554 5567799999999987 67999999999999999999999988764221
Q ss_pred HHhhccc---cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 259 LIRDRNI---QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 259 ~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....... ................+..+.+|+.+||+.||++|||+.++++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp CTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred cccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1110000 00000011111123457889999999999999999999999876
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=348.89 Aligned_cols=253 Identities=19% Similarity=0.208 Sum_probs=198.3
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeC----------
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG---------- 125 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---------- 125 (488)
..|++++.||+|+||+||+|. ..+++.||||++..... ...+|+.+++.++||||+++++++...
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 467888899999999999999 46789999999875432 234799999999999999999998543
Q ss_pred ----------------------------CeeEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 011353 126 ----------------------------DERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKE 175 (488)
Q Consensus 126 ----------------------------~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 175 (488)
...++||||+++ +|.+.+.. .....+++..+..++.||+.||.|||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~- 160 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL- 160 (383)
T ss_dssp ---------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 348899999985 88887753 2346799999999999999999999998
Q ss_pred CcccccccCcceeeC-CCCCeeeecCCCccccCCC---CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCC
Q 011353 176 RALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKH 250 (488)
Q Consensus 176 ~iiH~Dlkp~Nill~-~~~~~kl~DfGla~~~~~~---~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~ 250 (488)
||+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 999999999999997 6889999999999865433 3456789999999988754 8999999999999999999999
Q ss_pred CCCchhhHHHhhccc-----------------------cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHH
Q 011353 251 IPPSHALDLIRDRNI-----------------------QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307 (488)
Q Consensus 251 p~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il 307 (488)
||.+........... ...........++...+..+.+|+.+||+.||.+|||+.+++
T Consensus 241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (383)
T 3eb0_A 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320 (383)
T ss_dssp SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 887642211110000 000000011113334567899999999999999999999999
Q ss_pred HH--HHhhhc
Q 011353 308 TA--LVTLQK 315 (488)
Q Consensus 308 ~~--L~~~~~ 315 (488)
+| ++.+..
T Consensus 321 ~hp~f~~~~~ 330 (383)
T 3eb0_A 321 AHPFFDHLRN 330 (383)
T ss_dssp TSGGGHHHHH
T ss_pred cCHHHHHHHh
Confidence 87 555543
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-43 Score=333.97 Aligned_cols=252 Identities=15% Similarity=0.156 Sum_probs=200.3
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEE-eeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCC-CEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~E~ 134 (488)
..|++++.||+|+||.||+|.. .+++.||||++..... ...+.+|+.++..++|++++..+..+ ...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 3577888889999999999994 6789999998765432 23478999999999887766665555 677888999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee---CCCCCeeeecCCCccccCCC--
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~DfGla~~~~~~-- 209 (488)
+ +++|.+++... ...+++..++.++.||+.||.|||+. +++||||||+|||+ +.++.+||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 87 L-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 9 89999999643 34699999999999999999999999 99999999999999 78899999999999865432
Q ss_pred ---------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh-------HHHhhccccccccccc
Q 011353 210 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNIQTLTDSCL 273 (488)
Q Consensus 210 ---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------~~~~~~~~~~~~~~~~ 273 (488)
....+|+.|+|||++.+..++.++|||||||++|+|++|+.||..... .......... ...
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~-- 240 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PIE-- 240 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CHH--
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-hhh--
Confidence 234678999999999999999999999999999999999998864211 0011110000 000
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
......+..+.+++..||+.||++|||+.++++.|+.+.....
T Consensus 241 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 241 --VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp --HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred --hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0112235789999999999999999999999999999876543
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=343.78 Aligned_cols=248 Identities=19% Similarity=0.197 Sum_probs=201.1
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--------cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 126 (488)
..|++++.||.|+||.||+|.. .+|+.||||+++..... ..+.+.+|+.++..+ +||||+++++++...+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 4577788889999999999996 47999999998754321 134578999999999 7999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
..++||||++|++|.+++.. ...+++..+..++.||+.||.|||+. |++|+||||+|||++.++.+||+|||++...
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 99999999999999999975 34699999999999999999999998 9999999999999999999999999998866
Q ss_pred CCC---CccccCCCCCCcccccc------CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCC
Q 011353 207 RDG---RSYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
... ....+|+.|+|||++.+ ..++.++|||||||++|+|+||..||..................... ..
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~ 328 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS--PE 328 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH--HH
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--cc
Confidence 543 34568999999999864 35888999999999999999999988654322111111000000000 00
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....+..+.+++.+||+.||.+|||+.+++++
T Consensus 329 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 329 WDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01235679999999999999999999999986
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=344.71 Aligned_cols=251 Identities=18% Similarity=0.195 Sum_probs=204.2
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCcc-----------------HHHHHHHHHHHhccCCCCcccE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-----------------ARQFLEEARAVGQLRNRRLANL 118 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~l 118 (488)
..+|++++.||+|+||.||+|.. +++.||||++....... ...+.+|+.++..++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788899999999999999999 89999999986432111 1789999999999999999999
Q ss_pred EEEEeeCCeeEEEEecCCCCCHHhh------hccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccCcceeeCC
Q 011353 119 LGCCCEGDERLLVAEYMPNDTLAKH------LFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDD 191 (488)
Q Consensus 119 ~~~~~~~~~~~lv~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~ 191 (488)
++++.+.+..++||||+++|+|.++ +.......+++..++.++.||+.||.|||+ . |++|+||||+||+++.
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK-NICHRDVKPSNILMDK 187 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS-CEECCCCCGGGEEECT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC-CEeecCCChHhEEEcC
Confidence 9999999999999999999999999 654435679999999999999999999998 8 9999999999999999
Q ss_pred CCCeeeecCCCccccCCC--CccccCCCCCCccccccC-CCCC-CccchhhHHHHHHHHhCCCCCCchhh-HH----Hhh
Q 011353 192 DVNPRLSCFGLMKNSRDG--RSYSTNLAFTPPEYLRTG-RVTP-ESVMYSFGTLLLDLLSGKHIPPSHAL-DL----IRD 262 (488)
Q Consensus 192 ~~~~kl~DfGla~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~el~tg~~p~~~~~~-~~----~~~ 262 (488)
++.+||+|||++...... ....+++.|+|||++.+. .++. ++|||||||++|+|++|..||..... .. +..
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~ 267 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRT 267 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTS
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc
Confidence 999999999999865433 345678999999999877 5666 99999999999999999998865422 11 111
Q ss_pred cccccccccc---c-------cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 263 RNIQTLTDSC---L-------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 263 ~~~~~~~~~~---~-------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
... ...... . ........+..+.+|+.+||+.||.+|||+.+++++
T Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 268 KNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp CCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 000000 0 000113456789999999999999999999999986
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=334.04 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=197.6
Q ss_pred CcccccccCCCCCCCeEEEEEeC--CCC--EEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE--NQF--RIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
.+|++++.||+|+||+||+|.+. ++. .||||+++... ....+.+.+|+.+++.++||||+++++++.+.. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57888999999999999999842 333 68999997543 223567899999999999999999999998755 89
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+++++|.+++... ...+++..+..++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 97 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 999999999999999753 34589999999999999999999999 9999999999999999999999999998876443
Q ss_pred C-------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 210 ~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
. ...+|+.|+|||++.+..++.++||||||+++|+|++ |+.||............... ......+...
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~ 250 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE----GERLPRPEDC 250 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS----CCCCCCCTTC
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc----CCCCCCCcCc
Confidence 2 2345678999999998889999999999999999999 88887654332222111111 1111223346
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
+..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 67899999999999999999999999999988653
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=340.92 Aligned_cols=258 Identities=20% Similarity=0.228 Sum_probs=197.3
Q ss_pred cCCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHH--HhccCCCCcccEEEEEee-----CC
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARA--VGQLRNRRLANLLGCCCE-----GD 126 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~-----~~ 126 (488)
-++..|++++.||+|+||.||+|.. +++.||||+++.. ....+..|.++ +..++||||+++++.+.. ..
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 3567889999999999999999987 6789999999743 23445555555 445899999999986543 23
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--------CcccccccCcceeeCCCCCeeee
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE--------RALYHDLNAYRIVFDDDVNPRLS 198 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------~iiH~Dlkp~Nill~~~~~~kl~ 198 (488)
..++||||+++|+|.+++.. ...++..++.++.||+.||.|||+.. +|+||||||+|||++.++.+||+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred eEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 56899999999999999964 34689999999999999999999852 89999999999999999999999
Q ss_pred cCCCccccCCC------------CccccCCCCCCcccccc-------CCCCCCccchhhHHHHHHHHhCCCCCCchhh-H
Q 011353 199 CFGLMKNSRDG------------RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-D 258 (488)
Q Consensus 199 DfGla~~~~~~------------~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~ 258 (488)
|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||..||..... .
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 99999765322 13458999999999986 3466789999999999999999766543210 0
Q ss_pred -----------------HHhhccccccccccccC--CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCCC
Q 011353 259 -----------------LIRDRNIQTLTDSCLEG--QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (488)
Q Consensus 259 -----------------~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~~ 318 (488)
............+.... ......+..+.+||.+||+.||++|||+.++++.|+.+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 00000000000000011 1123467789999999999999999999999999999876543
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=335.05 Aligned_cols=250 Identities=18% Similarity=0.189 Sum_probs=187.9
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc-H-HHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-A-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~-~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..+|++++.||+|+||+||+|.. .+++.||||+++...... . +.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 35788899999999999999994 678999999997653222 2 23445555688889999999999999999999999
Q ss_pred ecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 133 EYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||+++ +|.+++.. .....+++..+..++.||+.||.|||++.|++||||||+||+++.++.+||+|||+++.....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 99975 88887753 234579999999999999999999998548999999999999999999999999998765443
Q ss_pred --CccccCCCCCCcccc----ccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 210 --RSYSTNLAFTPPEYL----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....+|+.|+|||++ .+..++.++|||||||++|+|+||+.||........... ...........+...+.
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 241 (290)
T 3fme_A 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK---QVVEEPSPQLPADKFSA 241 (290)
T ss_dssp -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH---HHHHSCCCCCCTTTSCH
T ss_pred cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH---HHhccCCCCcccccCCH
Confidence 234688999999996 455688999999999999999999998864221111100 01111111112234567
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+++.+||+.||.+|||+.++++|
T Consensus 242 ~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 242 EFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 89999999999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=337.17 Aligned_cols=254 Identities=19% Similarity=0.245 Sum_probs=200.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
.+..|++.+.||+|+||.||+|...+ .||+|+++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35778899999999999999998754 499999875432 22445788999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~---- 208 (488)
||+++++|.+++... ...+++..++.++.||+.||.|||+. +++||||||+|||++ ++.+||+|||+++....
T Consensus 109 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp BCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHT-TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 999999999999653 34689999999999999999999999 999999999999998 68999999999765421
Q ss_pred -----CCccccCCCCCCcccccc---------CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccccccccc
Q 011353 209 -----GRSYSTNLAFTPPEYLRT---------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 209 -----~~~~~~~~~y~aPE~~~~---------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
.....+++.|+|||++.+ ..++.++|||||||++|+|+||+.||...................
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--- 262 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN--- 262 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC---
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCC---
Confidence 122347889999999874 347889999999999999999999887654332222111111111
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
..+...+..+.+++..||..||.+|||+.++++.|+.+.+..
T Consensus 263 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 263 -LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp -CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred -CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 111224567999999999999999999999999999987654
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-43 Score=333.48 Aligned_cols=251 Identities=18% Similarity=0.150 Sum_probs=204.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc---------cHHHHHHHHHHHhccC-CCCcccEEEEE
Q 011353 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---------DARQFLEEARAVGQLR-NRRLANLLGCC 122 (488)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------~~~~~~~e~~~l~~l~-h~niv~l~~~~ 122 (488)
.-+..|++++.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3457788999999999999999995 56889999999754311 1345889999999995 99999999999
Q ss_pred eeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCC
Q 011353 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (488)
Q Consensus 123 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGl 202 (488)
.+.+..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999975 34699999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC---CccccCCCCCCccccc------cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccc
Q 011353 203 MKNSRDG---RSYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273 (488)
Q Consensus 203 a~~~~~~---~~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+...... ....+++.|+|||++. ...++.++||||||+++|+|++|..||.................. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~ 248 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ--F 248 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--C
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcc--c
Confidence 8865443 3346789999999985 456888999999999999999999888654322221111111000 0
Q ss_pred cCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
........+..+.+++.+||+.||.+|||+.+++++
T Consensus 249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 249 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 011113456789999999999999999999999875
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=338.04 Aligned_cols=250 Identities=17% Similarity=0.174 Sum_probs=203.9
Q ss_pred CcccccccCCCCCCCeEEEEEe--CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCC------cccEEEEEeeCCee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR------LANLLGCCCEGDER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~~ 128 (488)
.+|++++.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+.++..++|++ ++++++++.+.+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4788999999999999999985 368899999997532 23566889999999987654 99999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-----------------
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----------------- 191 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~----------------- 191 (488)
++||||+ +++|.+++......++++..+..++.||+.||.|||++ |++||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 88999999876556799999999999999999999999 9999999999999987
Q ss_pred --CCCeeeecCCCccccCCC-CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc---c
Q 011353 192 --DVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---I 265 (488)
Q Consensus 192 --~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~---~ 265 (488)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||..||............ .
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 250 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 678999999999865543 4457899999999999989999999999999999999999988754222110000 0
Q ss_pred cccc----------------------------------cc-cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 QTLT----------------------------------DS-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 ~~~~----------------------------------~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.... .. ......+...+..+.+|+.+||+.||.+|||+.+++++
T Consensus 251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 0000 00 00011233467889999999999999999999999987
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=342.13 Aligned_cols=248 Identities=15% Similarity=0.146 Sum_probs=174.7
Q ss_pred ccccccc-CCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEee----CCeeEEE
Q 011353 58 MENIVSE-HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLV 131 (488)
Q Consensus 58 ~~~~i~~-lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv 131 (488)
+|.++++ ||+|+||+||+|.. .+++.||||++... .....+....+..+.||||+++++++.. ....++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 6777654 89999999999995 46899999999643 1222223334566799999999999976 4558999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC---CCCeeeecCCCccccCC
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~DfGla~~~~~ 208 (488)
|||+++|+|.+++.......+++..++.++.||+.||.|||++ |++||||||+|||++. ++.+||+|||+++....
T Consensus 105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 9999999999999875556799999999999999999999999 9999999999999975 45599999999986544
Q ss_pred C--CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccccccc--ccCCCChHHHHH
Q 011353 209 G--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC--LEGQFSSDEGTE 284 (488)
Q Consensus 209 ~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 284 (488)
. ....+|+.|+|||++.+..++.++|||||||++|+|++|..||...............+.... .........+..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 263 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence 3 345678999999999888899999999999999999999998865433222111111111000 011111345678
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
+.+|+.+||+.||.+|||+.+++++-
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 264 AKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 99999999999999999999999974
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=355.57 Aligned_cols=251 Identities=14% Similarity=0.190 Sum_probs=200.9
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC--------CCCcccEEEEEe----
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--------NRRLANLLGCCC---- 123 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~---- 123 (488)
.+|++++.||+|+||+||+|. ..+++.||||+++... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 568899999999999999999 4568899999997542 23567889999999995 788999999987
Q ss_pred eCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC----------
Q 011353 124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---------- 193 (488)
Q Consensus 124 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---------- 193 (488)
.....++||||+ +++|.+.+.....+.+++..+..++.||+.||.|||++.||+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 456789999999 567777776555567999999999999999999999854899999999999998775
Q ss_pred ---------------------------------------CeeeecCCCccccCCC-CccccCCCCCCccccccCCCCCCc
Q 011353 194 ---------------------------------------NPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPES 233 (488)
Q Consensus 194 ---------------------------------------~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~ 233 (488)
.+||+|||+++..... ....+|+.|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 7999999999865443 445689999999999998999999
Q ss_pred cchhhHHHHHHHHhCCCCCCchhh-------HH---Hhh--ccc-----------cccccc-------------------
Q 011353 234 VMYSFGTLLLDLLSGKHIPPSHAL-------DL---IRD--RNI-----------QTLTDS------------------- 271 (488)
Q Consensus 234 Dv~slG~~l~el~tg~~p~~~~~~-------~~---~~~--~~~-----------~~~~~~------------------- 271 (488)
|||||||++|||+||+.||..... +. +.. +.. ......
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 999999999999999998864210 00 000 000 000000
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
......+...+..+.+|+.+||+.||.+|||+.++++|
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00012345678889999999999999999999999986
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=338.23 Aligned_cols=251 Identities=18% Similarity=0.205 Sum_probs=200.2
Q ss_pred CcccccccCCCCCCCeEEEEEe--CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhcc---CCCCcccEEEEEe-----e
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQL---RNRRLANLLGCCC-----E 124 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----~ 124 (488)
..|++++.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 4678889999999999999996 4688999999864321 1223466788777766 8999999999987 4
Q ss_pred CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 125 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
....++||||+. |+|.+++.......+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 567899999997 5999999876556699999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc--------ccccc---
Q 011353 205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------QTLTD--- 270 (488)
Q Consensus 205 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------~~~~~--- 270 (488)
..... ....+|+.|+|||++.+..++.++|||||||++|+|+||+.||............. ..+..
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence 65432 33467899999999998899999999999999999999999887543221110000 00000
Q ss_pred ----------ccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 271 ----------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 271 ----------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
......+....+..+.+|+.+||+.||.+|||+.+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000011223456789999999999999999999999976
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=351.91 Aligned_cols=246 Identities=22% Similarity=0.229 Sum_probs=192.2
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeC------CeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~l 130 (488)
.|++++.||+|+||.||+|.. .+++.||||++.... ..+.+|+.+|+.++||||+++++++... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 577888899999999999995 568999999986543 2234799999999999999999998542 23679
Q ss_pred EEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC-CCeeeecCCCccccC
Q 011353 131 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR 207 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~DfGla~~~~ 207 (488)
||||+++ +|.+.+.. .....+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 9999986 67766642 2345799999999999999999999998 99999999999999955 568999999998654
Q ss_pred CC---CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc------------------
Q 011353 208 DG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------------------ 265 (488)
Q Consensus 208 ~~---~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------------------ 265 (488)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+...........
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 345789999999999765 68999999999999999999999987642111000000
Q ss_pred cccccc-----cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 QTLTDS-----CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 ~~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....-+ .+...++...+.++.+|+.+||+.||.+|||+.++++|
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000000 00001223456789999999999999999999999987
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=342.39 Aligned_cols=247 Identities=15% Similarity=0.215 Sum_probs=195.7
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc--HHHHHHHHHHHhccCCCCcccEEEEEeeCCee-----
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDER----- 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~----- 128 (488)
..|.+++.||+|+||.||+|. ..+++.||||++....... ...+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 367788889999999999999 4578999999997653322 45788999999999999999999999877665
Q ss_pred -EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 129 -LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 129 -~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
++||||+. ++|.+++ ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~-~~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIM----GMEFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999997 5898888 33599999999999999999999999 99999999999999999999999999998655
Q ss_pred CC-CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccc-------cc----------
Q 011353 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------TL---------- 268 (488)
Q Consensus 208 ~~-~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------~~---------- 268 (488)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||.............. ..
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 43 34567999999999987 6789999999999999999999998875432111100000 00
Q ss_pred -----ccccccC---CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 -----TDSCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 -----~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
....... ......+..+.+|+.+||+.||.+|||+.+++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000 0112346789999999999999999999999987
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-43 Score=344.79 Aligned_cols=247 Identities=18% Similarity=0.234 Sum_probs=197.5
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeC-----CeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~l 130 (488)
.|++++.||+|+||.||+|.. .++..||||++...... ....+.+|+.++.+++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 688889999999999999994 56889999999754322 246789999999999999999999999765 36899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~- 209 (488)
||||+.+ +|.+++.. +.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.....
T Consensus 108 v~e~~~~-~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 108 VQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EEECCSE-EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEcccCc-CHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 9999975 89999864 4599999999999999999999999 9999999999999999999999999999865432
Q ss_pred ------CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccc-------c--------
Q 011353 210 ------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------T-------- 267 (488)
Q Consensus 210 ------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------~-------- 267 (488)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||.............. .
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 23467999999998765 4489999999999999999999988865421111100000 0
Q ss_pred ----ccccc-ccCC-----CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 ----LTDSC-LEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 ----~~~~~-~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... .... .....+..+.+|+.+||+.||.+|||+.++++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000 112345789999999999999999999999987
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-43 Score=336.54 Aligned_cols=248 Identities=17% Similarity=0.225 Sum_probs=192.5
Q ss_pred CcccccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEe------------
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC------------ 123 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~------------ 123 (488)
.+|++++.||+|+||.||+|... +++.||||++........+.+.+|+.+++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56888999999999999999954 58999999998665455677999999999999999999999873
Q ss_pred --eCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC-CCCCeeeecC
Q 011353 124 --EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCF 200 (488)
Q Consensus 124 --~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Df 200 (488)
+....++||||++ |+|.+++. .+++++..+..++.||+.||.|||+. |++||||||+|||++ +++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 3467899999997 59999995 35699999999999999999999999 999999999999997 5679999999
Q ss_pred CCccccCCC-------CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccc----
Q 011353 201 GLMKNSRDG-------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---- 268 (488)
Q Consensus 201 Gla~~~~~~-------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---- 268 (488)
|+++..... ....+|..|+|||++.+ ..++.++|||||||++|||+||+.||................
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 999865422 23356889999999876 668999999999999999999999887543211111000000
Q ss_pred --------------ccccc-cC-----CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 --------------TDSCL-EG-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 --------------~~~~~-~~-----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... .. ......+..+.+++.+||+.||.+|||+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000 00 0112346789999999999999999999999987
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=334.08 Aligned_cols=242 Identities=16% Similarity=0.169 Sum_probs=194.2
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--------ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
.|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++.... .
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~ 89 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-Y 89 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-E
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-e
Confidence 578888999999999999995 5688999999875421 11235889999999999999999999987654 8
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC---eeeecCCCccc
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKN 205 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~DfGla~~ 205 (488)
++||||+++++|.+++.. ...+++..+..++.||+.||.|||++ |++||||||+|||++.++. +||+|||+++.
T Consensus 90 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 999999999999999864 45699999999999999999999998 9999999999999986654 99999999987
Q ss_pred cCCCC---ccccCCCCCCccccc---cCCCCCCccchhhHHHHHHHHhCCCCCCchhh-----HHHhhcccccccccccc
Q 011353 206 SRDGR---SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 206 ~~~~~---~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~ 274 (488)
..... ...+|+.|+|||++. ...++.++|||||||++|+|++|..||..... ..+....... ...
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~--- 242 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF-IPE--- 242 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCC-CHH---
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcccc-Cch---
Confidence 65542 345799999999974 45689999999999999999999988864321 1111111100 000
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.....+..+.+++.+||+.||.+|||+.+++++
T Consensus 243 --~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 243 --VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp --HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 011245789999999999999999999999975
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-42 Score=335.24 Aligned_cols=247 Identities=16% Similarity=0.196 Sum_probs=195.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCe------
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE------ 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------ 127 (488)
..|.+.+.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 4577888899999999999994 56899999999764322 24568899999999999999999999987654
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+. ++|.+++. ..+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 58888873 3599999999999999999999999 99999999999999999999999999998654
Q ss_pred CC-CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc--------------------
Q 011353 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------------------- 265 (488)
Q Consensus 208 ~~-~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------------------- 265 (488)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 43 34567999999999987 678999999999999999999998886542211100000
Q ss_pred ---cccccc--cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 ---QTLTDS--CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 ---~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+... ..........+..+.+|+.+||+.||.+|||+.++++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 00011223457889999999999999999999999987
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=330.99 Aligned_cols=245 Identities=18% Similarity=0.242 Sum_probs=193.1
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEee------------
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE------------ 124 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------------ 124 (488)
+|++++.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 577888889999999999995 578999999996432 335678999999999999999999999865
Q ss_pred -CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 125 -~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
.+..++||||+++|+|.+++... ...+++..++.++.||+.||.|||++ +++|+||||+|||++.++.+||+|||++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhC-CeecccCCHHhEEEcCCCCEEEeeCcch
Confidence 35679999999999999999753 34588899999999999999999999 9999999999999999999999999998
Q ss_pred cccCCC------------------CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc
Q 011353 204 KNSRDG------------------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (488)
Q Consensus 204 ~~~~~~------------------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 264 (488)
...... ....+|+.|+|||++.+. .++.++|||||||++|+|++ ||............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~ 240 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHh
Confidence 765421 234578899999999864 68999999999999999998 44332111110001
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
... ........++...+..+.+++.+||+.||.+|||+.+++++
T Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 241 LRS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ccc-cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 100 01111223444566789999999999999999999999986
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-43 Score=346.21 Aligned_cols=252 Identities=19% Similarity=0.215 Sum_probs=194.9
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe------eEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE------RLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~l 130 (488)
..|.+++.||+|+||+||+|....+..||+|++..... ...+|+.+++.++||||+++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 36888899999999999999976666799998864332 12379999999999999999999965443 789
Q ss_pred EEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC-CCCCeeeecCCCccccC
Q 011353 131 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~DfGla~~~~ 207 (488)
||||++++ +.+.+.. .....+++..+..++.||+.||.|||+. ||+||||||+|||++ .++.+||+|||+++...
T Consensus 116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 99999875 4444321 1245699999999999999999999999 999999999999998 79999999999998653
Q ss_pred CC---CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc------------------
Q 011353 208 DG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------------------ 265 (488)
Q Consensus 208 ~~---~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------------------ 265 (488)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+...........
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 273 (394)
T 4e7w_A 194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY 273 (394)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 345678999999999765 48999999999999999999999987643211100000
Q ss_pred -----cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhhh
Q 011353 266 -----QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ 314 (488)
Q Consensus 266 -----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~ 314 (488)
...........++...++++.+|+.+||+.||.+|||+.++++| ++.+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 00000000011223356789999999999999999999999987 44443
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-42 Score=339.17 Aligned_cols=198 Identities=17% Similarity=0.140 Sum_probs=170.8
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CC-----CcccEEEEEeeCCee
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NR-----RLANLLGCCCEGDER 128 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~~~ 128 (488)
..+|++++.||+|+||+||+|.. .+++.||||+++... .....+.+|+.++..++ |+ +|+++++++...+..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 35788889999999999999994 568899999997432 23456788999998885 55 499999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccCcceeeC--CCCCeeeecCCCccc
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFD--DDVNPRLSCFGLMKN 205 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~--~~~~~kl~DfGla~~ 205 (488)
++||||+.+ +|.+++.......+++..+..++.||+.||.|||+ ..||+||||||+|||++ .++.+||+|||+++.
T Consensus 132 ~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 132 CLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 999999965 99999987555679999999999999999999995 23899999999999994 578899999999987
Q ss_pred cCCC-CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCch
Q 011353 206 SRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH 255 (488)
Q Consensus 206 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 255 (488)
.... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6543 4567899999999999999999999999999999999999988754
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=335.58 Aligned_cols=253 Identities=16% Similarity=0.184 Sum_probs=181.6
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHH-HHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..+|++++.||+|+||.||+|.. .+++.||||+++..... ...++..|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 46788889999999999999995 57899999999765432 2345666666 677789999999999999999999999
Q ss_pred ecCCCCCHHhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 133 EYMPNDTLAKHLFH---WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
||+++ +|.+++.. .....+++..+..++.|++.||.|||+..|++||||||+|||++.++.+||+|||+++.....
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence 99986 78887752 224569999999999999999999998548999999999999999999999999999765443
Q ss_pred ---CccccCCCCCCcccc----ccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 210 ---RSYSTNLAFTPPEYL----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
....+|+.|+|||++ .+..++.++|||||||++|+|++|+.||.............................+
T Consensus 180 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3aln_A 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFS 259 (327)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCC
T ss_pred cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCC
Confidence 233678999999998 4566899999999999999999999888653211000000000000111111123456
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+.+|+.+||+.||.+|||+.+++++
T Consensus 260 ~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 260 PSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 789999999999999999999999986
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=362.94 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=204.6
Q ss_pred CcccccccCCCCCCCeEEEEEeCC----CCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
..|++.+.||+|+||.||+|.... +..||||+++..... ..+.+.+|+.+++.++||||+++++++. .+..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 457788889999999999998532 467999998764332 2467999999999999999999999985 4668999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||+++|+|.+++... ...+++..++.++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 9999999999999753 34689999999999999999999999 99999999999999999999999999998765432
Q ss_pred ----ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 211 ----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||.............. ......+..++..+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l 621 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTL 621 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH-----TCCCCCCTTCCHHH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccccHHH
Confidence 2345678999999998899999999999999999997 8877765432221111100 11112344567889
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999998754
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=337.57 Aligned_cols=251 Identities=18% Similarity=0.207 Sum_probs=186.5
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe-------
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE------- 127 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------- 127 (488)
+..|++++.||+|+||+||+|.. .+++.||||++.... .....+.+++..+..++||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 100 (360)
T 3e3p_A 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY 100 (360)
T ss_dssp HTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence 45678888899999999999995 568999999986543 223456788888999999999999999976443
Q ss_pred eEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhh--cCCCcccccccCcceeeCC-CCCeeeecCCC
Q 011353 128 RLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCT--SKERALYHDLNAYRIVFDD-DVNPRLSCFGL 202 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~iiH~Dlkp~Nill~~-~~~~kl~DfGl 202 (488)
.++||||+++ +|.+.+.. .....+++..+..++.|++.||.||| +. ||+||||||+|||++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~ivH~Dlkp~NIll~~~~~~~kl~Dfg~ 178 (360)
T 3e3p_A 101 LNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGS 178 (360)
T ss_dssp EEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT-CCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred EEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC-CeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence 7899999987 55554432 23456899999999999999999999 87 9999999999999986 89999999999
Q ss_pred ccccCCC---CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccc-------cc--
Q 011353 203 MKNSRDG---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-------LT-- 269 (488)
Q Consensus 203 a~~~~~~---~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~-- 269 (488)
++..... ....+|+.|+|||++.+.. ++.++|||||||++|+|+||+.||............... ..
T Consensus 179 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (360)
T 3e3p_A 179 AKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258 (360)
T ss_dssp CBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHh
Confidence 9876543 3446789999999997654 899999999999999999999988754322111110000 00
Q ss_pred --------c---------ccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 --------D---------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 --------~---------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+ ...........+..+.+|+.+||+.||.+|||+.++++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 000011222357889999999999999999999999987
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=341.08 Aligned_cols=258 Identities=16% Similarity=0.203 Sum_probs=195.3
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCcc-----------HHHHHHHHHHHhccCCCC
Q 011353 46 IETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRR 114 (488)
Q Consensus 46 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~n 114 (488)
..++....+ .|.+++.||+|+||.||+|...++..||||++....... .+.+.+|+.+++.++|||
T Consensus 14 ~~~~~~~~~---~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 14 IAELHAMQS---PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHTTC---SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHhcc---ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 344444444 566777789999999999997779999999986432211 267999999999999999
Q ss_pred cccEEEEEeeC-----CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee
Q 011353 115 LANLLGCCCEG-----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189 (488)
Q Consensus 115 iv~l~~~~~~~-----~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill 189 (488)
|+++++++... ...++||||+. |+|.+++.. ....+++..+..++.||+.||.|||+. |++||||||+|||+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILL 167 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEE
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-cCEecCCChHHEEE
Confidence 99999998543 36799999997 588888864 344699999999999999999999999 99999999999999
Q ss_pred CCCCCeeeecCCCccccCCC---CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc
Q 011353 190 DDDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 265 (488)
Q Consensus 190 ~~~~~~kl~DfGla~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 265 (488)
+.++.+||+|||+++..... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999999999754332 34567889999999987 668999999999999999999999887643211111000
Q ss_pred c-------------------ccccccccC-------CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 Q-------------------TLTDSCLEG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 ~-------------------~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. ......... ......++.+.+|+.+||+.||.+|||+.++++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 000000000 0112345779999999999999999999999987
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=341.43 Aligned_cols=251 Identities=16% Similarity=0.218 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-----------CCCcccEEEEEee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----------NRRLANLLGCCCE 124 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~~ 124 (488)
..|.+++.||+|+||+||+|.. .+++.||||++.... .....+.+|+.++..++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 4688899999999999999994 678999999997532 23456889999999886 8999999999986
Q ss_pred CC----eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC------CCCC
Q 011353 125 GD----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD------DDVN 194 (488)
Q Consensus 125 ~~----~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~------~~~~ 194 (488)
.+ ..++||||+ +++|.+++.......+++..+..++.||+.||.|||++.||+||||||+|||++ ..+.
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence 54 789999999 889999998766667999999999999999999999954899999999999994 4457
Q ss_pred eeeecCCCccccCCC-CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH-------H---hh-
Q 011353 195 PRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-------I---RD- 262 (488)
Q Consensus 195 ~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-------~---~~- 262 (488)
+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||....... . ..
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence 999999999865543 44578999999999999999999999999999999999998886432100 0 00
Q ss_pred -cccc-----------------ccccc-------------cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 263 -RNIQ-----------------TLTDS-------------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 263 -~~~~-----------------~~~~~-------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+... ..... .....++...+..+.+|+.+||+.||.+|||+.++++|
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 0000 00000 00113456778899999999999999999999999987
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=344.17 Aligned_cols=248 Identities=14% Similarity=0.203 Sum_probs=181.2
Q ss_pred ccccc-cCCCCCCCeEEEEEeC---CCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEee--CCeeEEEE
Q 011353 59 ENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVA 132 (488)
Q Consensus 59 ~~~i~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 132 (488)
|++.+ +||+|+||+||+|... ++..||||++.... ....+.+|+.+|+.++||||+++++++.. ....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 45544 6899999999999954 57899999997543 23568899999999999999999999954 67899999
Q ss_pred ecCCCCCHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee----CCCCCeeeecCC
Q 011353 133 EYMPNDTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFG 201 (488)
Q Consensus 133 E~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~DfG 201 (488)
||+.+ +|.+++... ....+++..++.|+.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 99965 788887521 123599999999999999999999999 99999999999999 678999999999
Q ss_pred CccccCCC-------CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc----------
Q 011353 202 LMKNSRDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR---------- 263 (488)
Q Consensus 202 la~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~---------- 263 (488)
+++..... ....+|+.|+|||++.+. .++.++|||||||++|+|+||+.||.....+.....
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i 257 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence 99865432 235679999999999874 489999999999999999999998864322100000
Q ss_pred ----------cccccc-------------cccccC--------CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 264 ----------NIQTLT-------------DSCLEG--------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 264 ----------~~~~~~-------------~~~~~~--------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
.+..+. ...... ......+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp 335 (405)
T 3rgf_A 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP 335 (405)
T ss_dssp HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 000000 000000 00001145789999999999999999999999883
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=337.52 Aligned_cols=248 Identities=15% Similarity=0.196 Sum_probs=197.4
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeC-----CeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 129 (488)
..|.+++.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.+++.++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 4678888899999999999995 46889999999754322 245688999999999999999999998764 6789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~ 209 (488)
+||||+. ++|.+++.. +.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9999997 589999864 4699999999999999999999999 9999999999999999999999999999865422
Q ss_pred --------------CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc---------
Q 011353 210 --------------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------- 265 (488)
Q Consensus 210 --------------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------- 265 (488)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 12357899999998765 668999999999999999999999887643211100000
Q ss_pred -----------ccccccccc------CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 -----------QTLTDSCLE------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 -----------~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
......... .......+..+.+|+.+||+.||.+|||+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000 00012356789999999999999999999999987
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-42 Score=330.67 Aligned_cols=247 Identities=18% Similarity=0.234 Sum_probs=197.8
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccC--CCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 132 (488)
..|++++.||+|+||.||++...+++.||||++..... .....+.+|+.++..++ ||||+++++++.+.+..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 46888899999999999999987899999999975432 23567899999999997 599999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
| +.+++|.+++.. ...+++..+..++.||+.||.|||+. +++||||||+|||+++ +.+||+|||+++.....
T Consensus 108 e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp C-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred e-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 9 568899999975 34689999999999999999999999 9999999999999964 89999999999865432
Q ss_pred ---CccccCCCCCCcccccc-----------CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccC
Q 011353 210 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ...........
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~ 259 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEI 259 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSCC
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH---HHHHHhccccc
Confidence 23457899999999875 46888999999999999999999888653211110 11111111222
Q ss_pred CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
.++...+..+.+++.+||+.||.+|||+.+++++-.
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 233334678999999999999999999999998743
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-42 Score=325.82 Aligned_cols=247 Identities=19% Similarity=0.183 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
..|++++.||+|+||.||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 3678889999999999999995 478899999986432 2346779999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC---CCeeeecCCCccccCCCC
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~DfGla~~~~~~~ 210 (488)
|+++++|.+++.. ...+++..++.++.||+.||.|||++ |++|+||||+||+++.+ +.+||+|||++.......
T Consensus 102 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred ccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 9999999998865 34699999999999999999999999 99999999999999654 469999999988655432
Q ss_pred ---ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 211 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
...+++.|+|||++.+ .++.++||||||+++|+|++|..||..................... ......+..+.+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 255 (287)
T 2wei_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL--PQWRTISDDAKD 255 (287)
T ss_dssp SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS--GGGTTSCHHHHH
T ss_pred ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc--hhhhhcCHHHHH
Confidence 3356889999999875 5899999999999999999999988764332221111110000000 001234678999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
++.+||+.||.+|||+.+++++
T Consensus 256 li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 256 LIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHcccChhhCcCHHHHhcC
Confidence 9999999999999999999986
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=333.75 Aligned_cols=250 Identities=15% Similarity=0.143 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCC-CEEEEEEcCCCCCccHHHHHHHHHHHhccCCCC------cccEEEEEeeCCee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR------LANLLGCCCEGDER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~~ 128 (488)
.+|++++.||+|+||+||+|.. .++ ..||||+++... .....+.+|+.+++.++|++ ++.+++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 4788899999999999999995 344 689999997532 33556888999999998766 89999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee-------------------
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF------------------- 189 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill------------------- 189 (488)
++||||+ +++|.+++.......+++..+..++.||+.||.|||++ ||+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 66788888765556799999999999999999999999 99999999999999
Q ss_pred CCCCCeeeecCCCccccCCC-CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc---cc
Q 011353 190 DDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR---NI 265 (488)
Q Consensus 190 ~~~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~---~~ 265 (488)
+.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||..||........... ..
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 56789999999999865443 445789999999999999999999999999999999999998875432111000 00
Q ss_pred ccccc----------------------------------c-cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 QTLTD----------------------------------S-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 ~~~~~----------------------------------~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... . ..........+..+.+|+.+||+.||.+|||+.++++|
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000 0 00001123456789999999999999999999999976
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=333.04 Aligned_cols=239 Identities=18% Similarity=0.279 Sum_probs=200.1
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc------cHHHHHHHHHHHhccC--CCCcccEEEEEeeCC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLR--NRRLANLLGCCCEGD 126 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~ 126 (488)
...|++++.||+|+||.||+|. ..+++.||||+++..... ....+.+|+.+++.++ |+||+++++++.+.+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 4568889999999999999999 467899999999754321 1244778999999996 599999999999999
Q ss_pred eeEEEEecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC-CCCCeeeecCCCcc
Q 011353 127 ERLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMK 204 (488)
Q Consensus 127 ~~~lv~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~DfGla~ 204 (488)
..++|||++.+ ++|.+++.. ...+++..++.++.||+.||.|||+. +++||||||+|||++ +++.+||+|||+++
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred cEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 99999999976 899999975 35699999999999999999999998 999999999999998 78999999999998
Q ss_pred ccCCC--CccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 205 NSRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 205 ~~~~~--~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..... ....+|+.|+|||++.+..+ +.++|||||||++|||+||+.||..... ...... .++...
T Consensus 199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~----------~~~~~~ 266 (320)
T 3a99_A 199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRGQV----------FFRQRV 266 (320)
T ss_dssp ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHCCC----------CCSSCC
T ss_pred ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--hhcccc----------cccccC
Confidence 76543 33468899999999987765 6789999999999999999988865421 111110 122334
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+..+.+|+.+||+.||.+|||+.+++++
T Consensus 267 ~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 267 SSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 5789999999999999999999999886
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=331.50 Aligned_cols=238 Identities=20% Similarity=0.295 Sum_probs=193.7
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc------cHHHHHHHHHHHhcc----CCCCcccEEEEEeeC
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQL----RNRRLANLLGCCCEG 125 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~l~~~~~~~ 125 (488)
.+|++++.||+|+||.||+|. ..+++.||||+++..... ....+.+|+.++.++ +||||+++++++.+.
T Consensus 31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 457888888999999999998 467889999999765322 223366799999998 899999999999999
Q ss_pred CeeEEEEec-CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC-CCCCeeeecCCCc
Q 011353 126 DERLLVAEY-MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLM 203 (488)
Q Consensus 126 ~~~~lv~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~DfGla 203 (488)
+..++|||+ +.+++|.+++.. .+.+++..++.++.||+.||.|||+. +++||||||+||+++ .++.+||+|||++
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-TEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred CeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999999999 789999999975 34699999999999999999999999 999999999999998 8899999999998
Q ss_pred cccCCC--CccccCCCCCCccccccCCCC-CCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChH
Q 011353 204 KNSRDG--RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (488)
Q Consensus 204 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...... ....+++.|+|||++.+..+. .++|||||||++|+|++|+.||..... .... ...++..
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~----------~~~~~~~ 255 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--ILEA----------ELHFPAH 255 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHT----------CCCCCTT
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--Hhhh----------ccCCccc
Confidence 876543 345678999999999877664 589999999999999999988865421 1111 1122344
Q ss_pred HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 281 EGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 281 ~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+..+.+++.+||+.||++|||+.+++++
T Consensus 256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 256 VSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 56789999999999999999999999987
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=340.15 Aligned_cols=241 Identities=18% Similarity=0.143 Sum_probs=185.2
Q ss_pred cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCCCCCH
Q 011353 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 140 (488)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.++..+ +||||+++++++.+.+..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 4568999999998777778999999998643 345678999999987 89999999999999999999999995 599
Q ss_pred HhhhccCCCCC-----CCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC-------------CCeeeecCCC
Q 011353 141 AKHLFHWETQP-----MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-------------VNPRLSCFGL 202 (488)
Q Consensus 141 ~~~l~~~~~~~-----l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-------------~~~kl~DfGl 202 (488)
.+++....... .++..++.++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~ 174 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTT
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCcccccccccCCCceEEEEccccc
Confidence 99997532211 12334578999999999999998 99999999999999654 4899999999
Q ss_pred ccccCCCC--------ccccCCCCCCcccccc-------CCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhcccc
Q 011353 203 MKNSRDGR--------SYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ 266 (488)
Q Consensus 203 a~~~~~~~--------~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 266 (488)
++...... ...||+.|+|||++.+ ..++.++|||||||++|||+| |..||......... ...
T Consensus 175 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~--i~~ 252 (434)
T 2rio_A 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN--IIR 252 (434)
T ss_dssp CEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH--HHH
T ss_pred ceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH--Hhc
Confidence 98765432 3468999999999976 568999999999999999999 88777543222110 000
Q ss_pred cccc-ccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 267 TLTD-SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 267 ~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.... .......+...+.++.+++.+||+.||.+|||+.++++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 253 GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp TCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 0000 111112245678899999999999999999999999975
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=320.83 Aligned_cols=232 Identities=13% Similarity=0.109 Sum_probs=185.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc---HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
..|++++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 4688889999999999999995 458999999998654332 367899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 212 (488)
||++|++|.+++.. + .....+..|+.||+.||.|||++ ||+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~-givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRA-GVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHC-CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 99999999999943 2 45567899999999999999999 99999999999999999999998554
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccc-cccCCCChHHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS-CLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~ 291 (488)
|++ .++.++|||||||++|||+||+.||................... ..........+..+.+|+.+
T Consensus 175 -----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 242 (286)
T 3uqc_A 175 -----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR 242 (286)
T ss_dssp -----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHH
T ss_pred -----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHH
Confidence 333 36889999999999999999999887542210000000000000 00001123456789999999
Q ss_pred hccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 292 CLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
||+.||.+| |+.++++.|+.+....
T Consensus 243 ~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 243 SVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HcccCCccC-CHHHHHHHHHHHhccC
Confidence 999999999 9999999999987654
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=324.71 Aligned_cols=250 Identities=18% Similarity=0.243 Sum_probs=181.8
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc-H-HHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-A-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~-~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.+.+|++++.||+|+||.||+|.. .+++.||||++....... . +.+..+..+++.++||||+++++++.+.+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 356788899999999999999995 478999999997654322 2 2344455678888999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+ ++.+..+... ....+++..+..++.||+.||.|||++.|++|+||||+||+++.++.+||+|||++......
T Consensus 103 ~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 103 MELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp ECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred Eecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 9999 5556555533 34569999999999999999999998328999999999999999999999999998765433
Q ss_pred -CccccCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH-HhhccccccccccccCCCChHHH
Q 011353 210 -RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
....+|+.|+|||++. ...++.++|||||||++|+|++|+.||....... .......... ... ......+
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~ 257 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP-PLL--PGHMGFS 257 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC-CCC--CSSSCCC
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC-CCC--CccCCCC
Confidence 2346789999999995 4568899999999999999999998886522111 1111111000 000 0112346
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..+.+++.+||+.||.+|||+.+++++
T Consensus 258 ~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 258 GDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 789999999999999999999999986
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-42 Score=352.60 Aligned_cols=251 Identities=18% Similarity=0.185 Sum_probs=197.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEee------CCe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE------GDE 127 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 127 (488)
+.+|++++.||.|+||.||+|.. .+|+.||||+++.... ...+.+.+|+.+++.++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 46789999999999999999994 5689999999976532 235569999999999999999999999765 667
Q ss_pred eEEEEecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC---eeeecCCCc
Q 011353 128 RLLVAEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLM 203 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~DfGla 203 (488)
.++||||++||+|.+++.... ...+++..++.++.||+.||.|||+. |++||||||+||+++.++. +||+|||++
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~-gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT-TBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 899999999999999997633 23589999999999999999999998 9999999999999987665 899999999
Q ss_pred cccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh--------------cccc
Q 011353 204 KNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD--------------RNIQ 266 (488)
Q Consensus 204 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~--------------~~~~ 266 (488)
...... ....+|+.|+|||++.+..++.++|||||||++|+|+||..||.......... ....
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 251 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLT 251 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCS
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhc
Confidence 876543 34568999999999999999999999999999999999999886532111000 0000
Q ss_pred ccc----cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHH
Q 011353 267 TLT----DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307 (488)
Q Consensus 267 ~~~----~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il 307 (488)
... ............+..+.+++..||..||++|||+.+++
T Consensus 252 g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 252 GAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp SSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred cccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 000 00011223456789999999999999999999998743
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=336.38 Aligned_cols=243 Identities=14% Similarity=0.113 Sum_probs=186.4
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.|++.+.||+|+||+||.....+++.||||++...... .+.+|+.+|+.+ +|||||++++++.+....+|||||+.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 46667778999999976655667889999999754322 356899999999 79999999999999999999999996
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-----CCCeeeecCCCccccCCC--
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----DVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-----~~~~kl~DfGla~~~~~~-- 209 (488)
|+|.+++.... ..+++..++.++.||+.||.|||+. +|+||||||+|||++. ...+||+|||+++.....
T Consensus 102 -g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 102 -ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp -EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT-TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred -CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC-cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 59999997533 3355556789999999999999999 9999999999999943 235789999999865432
Q ss_pred -----CccccCCCCCCccccc---cCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChH
Q 011353 210 -----RSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....||+.|+|||++. +..++.++|||||||++|||+| |..||............ ...... .......
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~-~~~~~~--~~~~~~~ 255 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL-GACSLD--CLHPEKH 255 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHT-TCCCCT--TSCTTCH
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHh-ccCCcc--ccCcccc
Confidence 2346899999999998 3567889999999999999999 77666443222211111 000000 0112234
Q ss_pred HHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 281 EGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 281 ~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+..+.+|+.+||+.||.+|||+.++++|
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 56778999999999999999999999976
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=316.83 Aligned_cols=228 Identities=16% Similarity=0.151 Sum_probs=182.5
Q ss_pred Cccccc-ccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHH-hccCCCCcccEEEEEee----CCeeE
Q 011353 57 AMENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAV-GQLRNRRLANLLGCCCE----GDERL 129 (488)
Q Consensus 57 ~~~~~i-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~ 129 (488)
..|.++ +.||+|+||.||++.. .+++.||||+++. ...+.+|+.++ +.++||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456676 5689999999999994 6789999999863 34577899988 55589999999999987 67789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC---CCCeeeecCCCcccc
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS 206 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~DfGla~~~ 206 (488)
+||||+++|+|.+++.......+++..++.++.||+.||.|||+. +++||||||+|||++. ++.+||+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 170 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence 999999999999999876556799999999999999999999999 9999999999999987 788999999998643
Q ss_pred CCCCccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCC----hHHH
Q 011353 207 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS----SDEG 282 (488)
Q Consensus 207 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 282 (488)
. +..++.++|||||||++|+|+||+.||...............+... ....+ ...+
T Consensus 171 ~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 230 (299)
T 3m2w_A 171 T------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG--QYEFPNPEWSEVS 230 (299)
T ss_dssp T------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTT--CCSSCHHHHTTSC
T ss_pred c------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhc--cccCCchhcccCC
Confidence 2 2456789999999999999999999886543222111111111111 01112 2356
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTAL 310 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~L 310 (488)
..+.+++.+||+.||.+|||+.++++|-
T Consensus 231 ~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 231 EEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 7899999999999999999999999873
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-40 Score=327.58 Aligned_cols=238 Identities=16% Similarity=0.116 Sum_probs=179.5
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc---cHHHHHHHHHHHhccCC-CCcc---------c-------
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRN-RRLA---------N------- 117 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h-~niv---------~------- 117 (488)
+.+.+.||+|+||+||+|. ..+|+.||||+++..... ..+.+.+|+.+++.++| +|.. .
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 4555678999999999999 567899999999843322 25679999999999977 2211 1
Q ss_pred -----EEEEEee-----CCeeEEEEecCCCCCHHhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccc
Q 011353 118 -----LLGCCCE-----GDERLLVAEYMPNDTLAKHLF-----HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182 (488)
Q Consensus 118 -----l~~~~~~-----~~~~~lv~E~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dl 182 (488)
+..++.. ....+++|+++ +++|.+++. ......+++..++.++.||+.||.|||++ +||||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~iiHrDi 237 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTYL 237 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEECSCC
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCc
Confidence 1111111 12356777766 679999984 22344588899999999999999999999 9999999
Q ss_pred cCcceeeCCCCCeeeecCCCccccCCC-CccccCCCCCCcccc----------ccCCCCCCccchhhHHHHHHHHhCCCC
Q 011353 183 NAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYL----------RTGRVTPESVMYSFGTLLLDLLSGKHI 251 (488)
Q Consensus 183 kp~Nill~~~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~----------~~~~~~~~~Dv~slG~~l~el~tg~~p 251 (488)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998865543 33456 999999999 445588899999999999999999998
Q ss_pred CCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 252 PPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
|........ ...+.... ...+..+.+|+.+||+.||++|||+.+++++
T Consensus 317 f~~~~~~~~----~~~~~~~~------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 317 NTDDAALGG----SEWIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp CCTTGGGSC----SGGGGSSC------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCcchhhh----HHHHHhhc------ccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 875432211 11111110 1245789999999999999999998887654
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=322.57 Aligned_cols=241 Identities=12% Similarity=0.084 Sum_probs=187.1
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCC--------ccHHHHHHHHHHHhccC---------CCCcccEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLR---------NRRLANLL 119 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---------h~niv~l~ 119 (488)
.+|++++.||+|+||+||+|.. +|+.||||+++.... ...+.+.+|+.+++.++ ||||+++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4678889999999999999998 678999999975431 23477899999999886 77777777
Q ss_pred EEEe------------------------------eCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 011353 120 GCCC------------------------------EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169 (488)
Q Consensus 120 ~~~~------------------------------~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~ 169 (488)
+++. +.+..+|||||+++|++.+.+. .+.+++..+..++.||+.||.
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHHH
Confidence 7643 2678999999999998777774 356899999999999999999
Q ss_pred Hhh-cCCCcccccccCcceeeCCCC--------------------CeeeecCCCccccCCCCccccCCCCCCccccccCC
Q 011353 170 YCT-SKERALYHDLNAYRIVFDDDV--------------------NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGR 228 (488)
Q Consensus 170 ~LH-~~~~iiH~Dlkp~Nill~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~~ 228 (488)
||| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+..
T Consensus 176 ~lH~~~-~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~~ 253 (336)
T 2vuw_A 176 VAEASL-RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGDG 253 (336)
T ss_dssp HHHHHH-CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCCS
T ss_pred HHHHhC-CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCCC
Confidence 999 88 999999999999999887 8999999999876543 457899999999998766
Q ss_pred CCCCccchhhHHH-HHHHHhCCCCCCchhhHH-Hhhccccc-cccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHH
Q 011353 229 VTPESVMYSFGTL-LLDLLSGKHIPPSHALDL-IRDRNIQT-LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305 (488)
Q Consensus 229 ~~~~~Dv~slG~~-l~el~tg~~p~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 305 (488)
+.++||||+|++ .+++++|..||....+.. ........ ..........+...++++.+|+.+||+.| |+.+
T Consensus 254 -~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e 327 (336)
T 2vuw_A 254 -DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATD 327 (336)
T ss_dssp -SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHH
T ss_pred -ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHH
Confidence 889999998777 778888987775422100 11010000 00111111123457889999999999976 8999
Q ss_pred HH-HH
Q 011353 306 LV-TA 309 (488)
Q Consensus 306 il-~~ 309 (488)
++ +|
T Consensus 328 ~l~~H 332 (336)
T 2vuw_A 328 LLCQH 332 (336)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 88 65
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-33 Score=289.58 Aligned_cols=179 Identities=12% Similarity=0.062 Sum_probs=128.9
Q ss_pred cCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC----------ccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeEEE
Q 011353 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW----------PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 131 (488)
..+.|++|.+..+. .-.|+.+|||++..... .+.++|.+|+++|+++ .|+||+++++++++.+..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45677777777665 44688899999975421 1245699999999999 799999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~- 210 (488)
|||++|++|.++|.+ .++++.. .|+.||+.||.|+|++ |||||||||+|||++.+|++||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~-GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQ-GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHT-TCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHC-CceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 999999999999975 4567764 4789999999999999 99999999999999999999999999998765432
Q ss_pred ---ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCC
Q 011353 211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249 (488)
Q Consensus 211 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~ 249 (488)
...||+.|||||++.+ .+..++|+||+|++++++.++.
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 3467999999999985 5677899999999988876654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-28 Score=251.16 Aligned_cols=175 Identities=14% Similarity=0.141 Sum_probs=142.6
Q ss_pred ccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCcc--------HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
+.||+|+||.||+|.. .+..+++|+........ .+++.+|+.++++++||||+++..++...+..+|||||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~ 420 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY 420 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence 4579999999999954 56789999875432221 33489999999999999999666666677888999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----- 209 (488)
++|++|.+++.. +..++.|++.||.|||++ +|+||||||+|||++. ++||+|||+++.....
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~-gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKN-DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT-TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC-cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 999999999953 568999999999999999 9999999999999998 9999999999987653
Q ss_pred ------CccccCCCCCCcccccc--CCCCCCccchhhHHHHHHHHhCCCC
Q 011353 210 ------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHI 251 (488)
Q Consensus 210 ------~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p 251 (488)
....||+.|+|||++.. ..|+..+|+||..+-.++.+.++.+
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 23467999999999986 5588889999999988888776643
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-25 Score=212.19 Aligned_cols=154 Identities=16% Similarity=0.061 Sum_probs=121.7
Q ss_pred HHHHHhcCCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc------------------cHHHHHHHHHHHhc
Q 011353 48 TLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP------------------DARQFLEEARAVGQ 109 (488)
Q Consensus 48 ~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~ 109 (488)
.+....+.-..|.+.+.||.|+||.||+|...+|+.||||+++..... ....+.+|+.+++.
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 334444445556666889999999999999977999999999743211 23468999999999
Q ss_pred cCCCCcccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceee
Q 011353 110 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189 (488)
Q Consensus 110 l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill 189 (488)
++ | +++.+++.. +..++||||++||+|.+ +.. .....++.||+.||.|||+. |++||||||+|||+
T Consensus 161 l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~-giiHrDlkp~NILl 226 (282)
T 1zar_A 161 LQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLV 226 (282)
T ss_dssp TT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEE
T ss_pred cc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC-CCEeCCCCHHHEEE
Confidence 99 4 566555533 55799999999999998 521 12457999999999999998 99999999999999
Q ss_pred CCCCCeeeecCCCccccCCCCccccCCCCCCccccc
Q 011353 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLR 225 (488)
Q Consensus 190 ~~~~~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~ 225 (488)
+ ++.+||+|||+++. +..++|||++.
T Consensus 227 ~-~~~vkl~DFG~a~~---------~~~~~a~e~l~ 252 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE---------VGEEGWREILE 252 (282)
T ss_dssp E-TTEEEECCCTTCEE---------TTSTTHHHHHH
T ss_pred E-CCcEEEEECCCCeE---------CCCCCHHHHHH
Confidence 9 99999999999864 34578899875
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-21 Score=180.65 Aligned_cols=149 Identities=13% Similarity=0.065 Sum_probs=113.5
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCCeEEEEEe-CCCCE--EEEEEcCCCCCcc------------------------HH
Q 011353 46 IETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFR--IAVKRFNRSAWPD------------------------AR 98 (488)
Q Consensus 46 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~~ 98 (488)
...+....+.-..|.+.+.||.|+||.||+|.. .+|+. ||||+++...... ..
T Consensus 36 ~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 1zth_A 36 LKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFI 115 (258)
T ss_dssp HHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHH
T ss_pred HHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHH
Confidence 334444444545677888899999999999996 78888 9999976432110 12
Q ss_pred HHHHHHHHHhccCCCCc--ccEEEEEeeCCeeEEEEecCCC-C----CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011353 99 QFLEEARAVGQLRNRRL--ANLLGCCCEGDERLLVAEYMPN-D----TLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 171 (488)
Q Consensus 99 ~~~~e~~~l~~l~h~ni--v~l~~~~~~~~~~~lv~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L 171 (488)
.+.+|+.+|..+.|+++ +.+++. +..+|||||+.+ | +|.++... .++..+..++.|++.||.||
T Consensus 116 ~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 116 WTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHH
Confidence 57899999999988754 444443 356899999942 3 67766532 23456788999999999999
Q ss_pred h-cCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 172 T-SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 172 H-~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
| +. |++||||||+|||++. .++|+|||++...
T Consensus 187 H~~~-givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEA-ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTS-CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHC-CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9 87 9999999999999998 9999999998764
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.8e-20 Score=149.72 Aligned_cols=104 Identities=18% Similarity=0.238 Sum_probs=100.1
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..+.++|+.+++.|+|++|++.|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 90 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAAC 90 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 4556779999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccccccc
Q 011353 461 LFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|..+|++++|+++|++|++++|++.
T Consensus 91 ~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 91 LVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 9999999999999999999999764
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.1e-19 Score=148.88 Aligned_cols=107 Identities=13% Similarity=0.094 Sum_probs=99.9
Q ss_pred hHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC------C-----HHHHhhHHHHHHhcCChHHHHHHHHHhHhh-
Q 011353 379 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV------S-----PTAFARRSLSYLMSDMPQEALNDASQAQVI- 446 (488)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l- 446 (488)
...+..+..+|+.+++.|+|++|+..|++||+++|++ + +.+|+|+|.++..+|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 4466778899999999999999999999999999982 2 239999999999999999999999999999
Q ss_pred ------CCCchHHH----HHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 447 ------SPVWHMAA----YLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 447 ------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+|+++++| +++|.++..+|++++|+++|++|++++|++.
T Consensus 88 n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 88 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 99999999 9999999999999999999999999999775
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=141.12 Aligned_cols=102 Identities=7% Similarity=-0.053 Sum_probs=97.7
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
...+...|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|+|++|+..|++|++++|+++.+|+++|.+|
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~ 114 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQ 114 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHH
Confidence 345568999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHcccccc
Q 011353 462 FALGKENEAQAALREASILENKK 484 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..+|++++|+++|++|++++|+.
T Consensus 115 ~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 115 LRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCH
Confidence 99999999999999999998754
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-19 Score=171.77 Aligned_cols=150 Identities=10% Similarity=0.034 Sum_probs=106.4
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc--------------cHHH--------HHHH
Q 011353 46 IETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------------DARQ--------FLEE 103 (488)
Q Consensus 46 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~--------~~~e 103 (488)
+-.+....+.=..|.+.+.||.|+||.||+|...+|+.||||+++..... .... ..+|
T Consensus 84 ~LAL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE 163 (397)
T 4gyi_A 84 YLALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKE 163 (397)
T ss_dssp HHHHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 33445555555568899999999999999999888999999987632100 0111 2346
Q ss_pred HHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCccccccc
Q 011353 104 ARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183 (488)
Q Consensus 104 ~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlk 183 (488)
...|.++.+.++....-+... ..+|||||++|++|.++.. .+ ....++.||+.+|.+||+. |+||||||
T Consensus 164 ~~nL~rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~------~~--~~~~l~~qll~~l~~lH~~-gIVHrDLK 232 (397)
T 4gyi_A 164 FAFMKALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSS------VP--DPASLYADLIALILRLAKH-GLIHGDFN 232 (397)
T ss_dssp HHHHHHHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCC------CS--CHHHHHHHHHHHHHHHHHT-TEECSCCS
T ss_pred HHHHHHHHhcCCCCCeeeecc--CceEEEEecCCccHhhhcc------cH--HHHHHHHHHHHHHHHHHHC-CCcCCCCC
Confidence 666666654443222111112 2379999999988876542 11 2356789999999999998 99999999
Q ss_pred CcceeeCCCC----------CeeeecCCCcccc
Q 011353 184 AYRIVFDDDV----------NPRLSCFGLMKNS 206 (488)
Q Consensus 184 p~Nill~~~~----------~~kl~DfGla~~~ 206 (488)
|.|||+++++ .+.|+||+.+...
T Consensus 233 p~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 233 EFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp TTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 9999998776 3899999987544
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=137.38 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=96.1
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc-------hH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW-------HM 452 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~-------~~ 452 (488)
+.+....+.|+.+++.|+|++|++.|++||+++|+ +..+|+++|.+|..+|+|++|+++|++||+++|++ +.
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 34556678999999999999999999999999999 99999999999999999999999999999999877 46
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 453 AAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 453 a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
+|+++|.++..+|++++|+++|++|++++|+
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 8999999999999999999999999998764
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-17 Score=140.92 Aligned_cols=107 Identities=21% Similarity=0.211 Sum_probs=100.5
Q ss_pred hhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhc------------------CCCCCHHHHhhHHHHHHhcCChHHHHHH
Q 011353 378 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV------------------GTMVSPTAFARRSLSYLMSDMPQEALND 439 (488)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~ 439 (488)
.+..+..+..+|+.+++.|+|++|+..|++||.+ +|. ...+|+++|.||..+|+|++|+.+
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3456778889999999999999999999999999 777 779999999999999999999999
Q ss_pred HHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 440 ASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 440 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 86 ~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 86 SSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 9999999999999999999999999999999999999999999764
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.2e-17 Score=137.26 Aligned_cols=121 Identities=13% Similarity=0.102 Sum_probs=104.6
Q ss_pred cchhhhhhhhhhhhhhHhhhh----HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHH
Q 011353 364 EGAATELSFQMWTGQMQETLN----SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALND 439 (488)
Q Consensus 364 ~~~~~~~a~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~ 439 (488)
..+..+.++..+..++...++ ....|..+++.|+|++|++.|+++|+++|+ +..+|+++|.+|..+|++++|+..
T Consensus 9 ~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~ 87 (150)
T 4ga2_A 9 SKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVEC 87 (150)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHH
Confidence 334445555555554444333 348899999999999999999999999999 999999999999999999999999
Q ss_pred HHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHH-HHHHHccccccc
Q 011353 440 ASQAQVISPVWHMAAYLQAAALFALGKENEAQAA-LREASILENKKS 485 (488)
Q Consensus 440 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~-~~~al~ld~~~~ 485 (488)
|++|++++|+++.+|+++|.+|..+|++++|.+. +++|++++|++.
T Consensus 88 ~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 88 YRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 9999999999999999999999999999988876 599999999753
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-16 Score=130.74 Aligned_cols=100 Identities=19% Similarity=0.242 Sum_probs=97.0
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..+..+|..+++.|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3556779999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccc
Q 011353 461 LFALGKENEAQAALREASILE 481 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld 481 (488)
+..+|++++|+++|+++++++
T Consensus 82 ~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 82 QIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHhC
Confidence 999999999999999999999
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=6.7e-16 Score=130.49 Aligned_cols=102 Identities=12% Similarity=0.043 Sum_probs=97.3
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
...+...|..++..|+|++|+..|++++.++|+ +..+|+++|.++..+|++++|+..|++|++++|+++.+++++|.+|
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 99 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECL 99 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 445568899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHcccccc
Q 011353 462 FALGKENEAQAALREASILENKK 484 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..+|++++|++.|+++++++|++
T Consensus 100 ~~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 100 LQXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHHHHHHCcCC
Confidence 99999999999999999998753
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.5e-16 Score=132.51 Aligned_cols=104 Identities=24% Similarity=0.343 Sum_probs=99.5
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..+..+|..++..|+|++|++.|+++++++|+ +..+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 88 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4556778999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccccccc
Q 011353 461 LFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|..+|++++|+++|+++++++|++.
T Consensus 89 ~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 89 RFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HHHccCHHHHHHHHHHHHHhCCCch
Confidence 9999999999999999999998764
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=5.2e-16 Score=126.34 Aligned_cols=102 Identities=13% Similarity=0.069 Sum_probs=93.1
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
.....+|..+++.|++++|+..|+++++++|+ +..+|+++|.++..+|++++|+..|++|++++|+++.+++++|.+|.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34568899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHccccccc
Q 011353 463 ALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.+|++++|+..|+++++++|+..
T Consensus 97 ~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 97 NEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHHHC------
T ss_pred HcCCHHHHHHHHHHHHHhCcCCC
Confidence 99999999999999999999753
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=127.42 Aligned_cols=102 Identities=11% Similarity=0.077 Sum_probs=97.3
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
...+...|..++..|+|++|+..|++++.++|+ +..+|+++|.+|..+|++++|+..|++|++++|+++.+++++|.+|
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 96 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECH 96 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 345568899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHcccccc
Q 011353 462 FALGKENEAQAALREASILENKK 484 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..+|++++|++.|+++++++|.+
T Consensus 97 ~~~g~~~~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 97 LQLGDLDGAESGFYSARALAAAQ 119 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999998854
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-15 Score=159.96 Aligned_cols=135 Identities=17% Similarity=0.128 Sum_probs=121.0
Q ss_pred HHHHHHHHhcCCCccchhhhhhhhhhhhhhHhhhhH----HHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHH
Q 011353 350 AIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNS----KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSL 425 (488)
Q Consensus 350 ~~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~ 425 (488)
.-.+.+..+|......+..+.+...+.++++..++. .+.|..+.+.|++++|++.|++||+++|+ +..+|+++|.
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~ 85 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGN 85 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHH
Confidence 345666777766666777888888888888765554 48999999999999999999999999999 9999999999
Q ss_pred HHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 426 SYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 426 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+|..+|++++|++.|++|++++|+++.+|+++|.+|..+|++++|++.|++|++++|+..
T Consensus 86 ~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~ 145 (723)
T 4gyw_A 86 TLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFP 145 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999999999999999999999999999999999999999753
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-14 Score=120.90 Aligned_cols=101 Identities=22% Similarity=0.357 Sum_probs=97.5
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
+..+...|..++..|+|++|+..|++++.++|+ +..+++++|.++..+|++++|+..++++++++|+++.+++++|.+|
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 455678999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHccccc
Q 011353 462 FALGKENEAQAALREASILENK 483 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~ 483 (488)
..+|++++|+..|+++++++|+
T Consensus 88 ~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 88 LEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHChh
Confidence 9999999999999999999987
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.59 E-value=7.8e-15 Score=128.41 Aligned_cols=101 Identities=21% Similarity=0.183 Sum_probs=96.7
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 463 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (488)
.....|..+...++++.|++.+.++++++|+ +..++..+|.+|..+|++++|++.|+++++++|+++.+|+++|.+|..
T Consensus 75 ~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~ 153 (184)
T 3vtx_A 75 AYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG 153 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH
Confidence 3448899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHccccccc
Q 011353 464 LGKENEAQAALREASILENKKS 485 (488)
Q Consensus 464 ~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+|++++|+++|++|++++|++.
T Consensus 154 ~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 154 KGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp TTCHHHHHHHHHHHHHTTHHHH
T ss_pred CCCHHHHHHHHHHHHhCCccCH
Confidence 9999999999999999999753
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-15 Score=127.79 Aligned_cols=92 Identities=15% Similarity=0.045 Sum_probs=86.1
Q ss_pred HHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCCh----------HHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 392 AFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMP----------QEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 392 ~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
.-+.+.|++|++.|++|++++|+ ++.+|.++|.++..++++ ++|+..|++||+++|+++++|+++|.+|
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay 90 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHH
Confidence 34568899999999999999999 999999999999999875 5999999999999999999999999999
Q ss_pred HHCC-----------CHHHHHHHHHHHHcccccc
Q 011353 462 FALG-----------KENEAQAALREASILENKK 484 (488)
Q Consensus 462 ~~~~-----------~~~~A~~~~~~al~ld~~~ 484 (488)
..+| ++++|+++|++|++++|++
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 9885 8999999999999999975
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.58 E-value=5.4e-15 Score=132.56 Aligned_cols=101 Identities=14% Similarity=0.033 Sum_probs=77.1
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhh----------------HHHHHHhcCChHHHHHHHHHhHhh
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFAR----------------RSLSYLMSDMPQEALNDASQAQVI 446 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~al~l 446 (488)
..+..+|..++..|+|++|+..|+++++++|+ +..+|+. +|.+|..+|++++|+..|++++++
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34556777777777777777777777777777 7777777 777777777777777777777777
Q ss_pred CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 447 SPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 447 ~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+|+++.+++++|.+|..+|++++|++.|+++++++|++
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 77777777777777777777777777777777777754
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.56 E-value=5.6e-15 Score=144.84 Aligned_cols=132 Identities=6% Similarity=-0.008 Sum_probs=111.9
Q ss_pred HHHHHhcCCCccchhhhhhhhhhhhhhHhhhhH----HHhhhHHHhhcC-HHHHHHHHHHHHhcCCCCCHHHHhhHHHHH
Q 011353 353 EILEKLGYKDDEGAATELSFQMWTGQMQETLNS----KKKGDVAFRHKD-FRASIECYTQFIDVGTMVSPTAFARRSLSY 427 (488)
Q Consensus 353 ~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~----~~~g~~~~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~ 427 (488)
+.+..+|......+..+.++..+.+++...++. ..+|..+...|+ +++|+..|++||+++|+ +..+|+++|.++
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~ 176 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLV 176 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHH
Confidence 334444433333445666777777776665543 489999999996 99999999999999999 999999999999
Q ss_pred HhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 428 LMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 428 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
..+|++++|+.+|++||+++|+++.+|+++|.++..+|++++|+++|+++++++|.+.
T Consensus 177 ~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~ 234 (382)
T 2h6f_A 177 EWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 234 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999999999999999998753
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.9e-14 Score=128.93 Aligned_cols=96 Identities=6% Similarity=0.041 Sum_probs=89.9
Q ss_pred hhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC---
Q 011353 388 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL--- 464 (488)
Q Consensus 388 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~--- 464 (488)
.|..+++.|++++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|+..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 899999999999999999999999999 9999999999999999999999999999999999999999988877543
Q ss_pred --------------------------------CCHHHHHHHHHHHHcccccc
Q 011353 465 --------------------------------GKENEAQAALREASILENKK 484 (488)
Q Consensus 465 --------------------------------~~~~~A~~~~~~al~ld~~~ 484 (488)
|+|++|+.+|++|++++|+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 46899999999999999864
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=2.2e-15 Score=127.68 Aligned_cols=97 Identities=9% Similarity=-0.095 Sum_probs=90.4
Q ss_pred hhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCH
Q 011353 388 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKE 467 (488)
Q Consensus 388 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~ 467 (488)
.|..+.+.|++++|++.|++++..+|+ ++..++++|.+|..+|+|++|++.|++|++++|+++.+|+++|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 577888999999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccccccc
Q 011353 468 NEAQAALREASILENKKS 485 (488)
Q Consensus 468 ~~A~~~~~~al~ld~~~~ 485 (488)
++|+.+|++|++++|++.
T Consensus 82 ~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQK 99 (150)
T ss_dssp HHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 999999999999999753
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=7.5e-14 Score=111.71 Aligned_cols=103 Identities=23% Similarity=0.334 Sum_probs=98.0
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..+...|..++..|++++|+..|++++..+|+ +..++.++|.++..+|++++|+..++++++++|+++.+++++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 3455678899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHcccccc
Q 011353 461 LFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+..+|++++|++.|+++++++|.+
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~ 105 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANN 105 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999865
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.5e-14 Score=137.16 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=98.4
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC---------------HHHHhhHHHHHHhcCChHHHHHHHHHhHh
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---------------PTAFARRSLSYLMSDMPQEALNDASQAQV 445 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 445 (488)
.+..+..+|..+++.|+|++|+..|++|++++|+ + ..+|+++|.||..+|++++|+..|++|++
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4556669999999999999999999999999999 6 69999999999999999999999999999
Q ss_pred hCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 446 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 446 l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
++|+++.+|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 225 ~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 264 (336)
T 1p5q_A 225 LDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 264 (336)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred hCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999999999999999999998753
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.54 E-value=5e-14 Score=125.06 Aligned_cols=107 Identities=20% Similarity=0.214 Sum_probs=99.4
Q ss_pred hhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCH----------------HHHhhHHHHHHhcCChHHHHHHHH
Q 011353 378 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----------------TAFARRSLSYLMSDMPQEALNDAS 441 (488)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------~~~~~~~~~~~~~~~~~~A~~~~~ 441 (488)
....+..+...|..++..|+|++|+..|++++++.|. +. .++.++|.+|..+|++++|+.+++
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 112 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 112 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3444566779999999999999999999999999998 65 899999999999999999999999
Q ss_pred HhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 442 QAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
++++++|+++.+++++|.+|..+|++++|++.|+++++++|++.
T Consensus 113 ~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 156 (198)
T 2fbn_A 113 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 156 (198)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999999999999999999999998653
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-14 Score=131.17 Aligned_cols=96 Identities=15% Similarity=0.068 Sum_probs=62.3
Q ss_pred HhhhHHHhh-----------cCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHH
Q 011353 387 KKGDVAFRH-----------KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 455 (488)
Q Consensus 387 ~~g~~~~~~-----------~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (488)
..|..+... |++++|+..|+++++++|+ +..+++++|.++..+|++++|+..|++|++++ +++.+++
T Consensus 78 ~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~ 155 (217)
T 2pl2_A 78 VLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRS 155 (217)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHH
T ss_pred HHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHH
Confidence 556666666 6666666666666666666 66666666666666666666666666666666 6666666
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 456 LQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
++|.+|..+|++++|+..|+++++++|++
T Consensus 156 ~la~~~~~~g~~~~A~~~~~~al~~~P~~ 184 (217)
T 2pl2_A 156 ALAELYLSMGRLDEALAQYAKALEQAPKD 184 (217)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 66666666666666666666666666643
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.1e-14 Score=150.44 Aligned_cols=104 Identities=14% Similarity=0.079 Sum_probs=99.4
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..+.+.|..+.++|++++|++.|++||+++|+ +..+|+++|.+|.++|++++|++.|++|++++|+++.+|+++|.+
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3455668999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccccccc
Q 011353 461 LFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|..+|++++|++.|++|++++|+..
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~ 111 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFA 111 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999754
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.54 E-value=4e-14 Score=142.68 Aligned_cols=105 Identities=15% Similarity=0.210 Sum_probs=96.6
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC---------------HHHHhhHHHHHHhcCChHHHHHHHHHhH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---------------PTAFARRSLSYLMSDMPQEALNDASQAQ 444 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al 444 (488)
..+..+..+|+.+++.|+|++|+..|++||+++|+ + ..+|+++|.||.++|+|++|+.+|++||
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 344 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKAL 344 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 34556679999999999999999999999999999 6 6999999999999999999999999999
Q ss_pred hhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 445 VISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 445 ~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 345 ~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 345 GLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred hcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999998764
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.8e-14 Score=128.74 Aligned_cols=116 Identities=14% Similarity=0.156 Sum_probs=89.2
Q ss_pred chhhhhhhhhhhhhhHhhhh----HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc----------
Q 011353 365 GAATELSFQMWTGQMQETLN----SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS---------- 430 (488)
Q Consensus 365 ~~~~~~a~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~---------- 430 (488)
.+..+.+...+.+++...++ +...|..+.+.|++++|+..|+++++++|+ +..+++++|.++..+
T Consensus 18 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~~~~~~ 96 (217)
T 2pl2_A 18 LGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPR-YLGGYMVLSEAYVALYRQAEDRERG 96 (217)
T ss_dssp TTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTCSSHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhhhhhhhhccc
Confidence 33445555555555544333 347788888888888888888888888888 888888888888888
Q ss_pred -CChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccc
Q 011353 431 -DMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481 (488)
Q Consensus 431 -~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld 481 (488)
|++++|+..|++|++++|+++.+++++|.+|..+|++++|++.|++|++++
T Consensus 97 ~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 97 KGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 888888888888888888888888888888888888888888888888776
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=8.7e-14 Score=114.10 Aligned_cols=102 Identities=24% Similarity=0.279 Sum_probs=97.1
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
..+...|..++..|+|++|+..|+++++.+|+ +..+++++|.++..+|++++|+..++++++++|+++.+++++|.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 95 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE 95 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 45567899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHccccccc
Q 011353 463 ALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.+|++++|++.|+++++++|.+.
T Consensus 96 ~~~~~~~A~~~~~~~~~~~p~~~ 118 (133)
T 2lni_A 96 AMKDYTKAMDVYQKALDLDSSCK 118 (133)
T ss_dssp HTTCHHHHHHHHHHHHHHCGGGT
T ss_pred HHhhHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999998653
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=5.6e-14 Score=132.18 Aligned_cols=102 Identities=22% Similarity=0.359 Sum_probs=98.0
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
+..+..+|..+++.|+|++|+..|++|++++|+ +..+|+++|.+|..+|++++|+.++++|++++|+++.+++++|.+|
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345678999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHcccccc
Q 011353 462 FALGKENEAQAALREASILENKK 484 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..+|++++|+..|++|++++|+.
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999865
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4e-14 Score=138.38 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=102.2
Q ss_pred hhhhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHh----------------cCCCCCHHHHhhHHHHHHhcCChHHHHH
Q 011353 375 WTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFID----------------VGTMVSPTAFARRSLSYLMSDMPQEALN 438 (488)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~~~~~~~~~~~~~A~~ 438 (488)
.......+..+..+|+.+++.|+|++|++.|++||+ ++|. +..+|+++|.+|.++|++++|++
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHH
Confidence 444555667788999999999999999999999999 7888 89999999999999999999999
Q ss_pred HHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 439 DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 439 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+|++|++++|+++.+|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~ 341 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 341 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999999998653
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.51 E-value=2.1e-13 Score=116.51 Aligned_cols=104 Identities=25% Similarity=0.349 Sum_probs=89.5
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 459 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (488)
..+..+...|..++..|+|++|+..|+++++++|. +..+++++|.++..+|++++|+..++++++++|+++.+++++|.
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~ 89 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 89 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 44556668888888888888999889888888888 88888888888888888888988888888888888888888888
Q ss_pred HHHHCCCHHHHHHHHHHHHcccccc
Q 011353 460 ALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
++..+|++++|+..|+++++++|.+
T Consensus 90 ~~~~~~~~~~A~~~~~~a~~~~p~~ 114 (166)
T 1a17_A 90 SNMALGKFRAALRDYETVVKVKPHD 114 (166)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCC
Confidence 8888888989998888888888754
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-13 Score=112.26 Aligned_cols=100 Identities=14% Similarity=0.093 Sum_probs=94.5
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCH---HHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc---hHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP---TAFARRSLSYLMSDMPQEALNDASQAQVISPVW---HMAAYLQ 457 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~~~ 457 (488)
.+...|..++..|+|++|+..|+++++.+|+ +. .+++++|.++..+|++++|+..|+++++++|++ +.+++.+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3457899999999999999999999999999 66 799999999999999999999999999999999 8999999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 458 AAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
|.+|..+|++++|+..|+++++..|+.
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999998864
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.4e-13 Score=115.16 Aligned_cols=102 Identities=24% Similarity=0.256 Sum_probs=96.7
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC---HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 458 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (488)
+..+...|..++..|+|++|+..|+++++++|+ + ..++.++|.+|..+|++++|+..++++++++|+++.+++++|
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 345568899999999999999999999999998 7 899999999999999999999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 459 AALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+|..+|++++|+..|+++++++|++
T Consensus 107 ~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 107 QALEKLGRLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999865
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=125.13 Aligned_cols=130 Identities=14% Similarity=0.142 Sum_probs=110.9
Q ss_pred HHHHHhcCCCccchhhhhhhhhhhhhhHhhh-----hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHH
Q 011353 353 EILEKLGYKDDEGAATELSFQMWTGQMQETL-----NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSY 427 (488)
Q Consensus 353 ~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~ 427 (488)
+.+...|......+....+...+.+++...+ ....+|..++..|+|++|+..|+++++++|+ +..++.++|.+|
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~ 86 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHH
Confidence 3444455444445556666666666665442 3347999999999999999999999999999 999999999999
Q ss_pred HhcCChHHHHHHHHHhHhhCCCch-------HHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 428 LMSDMPQEALNDASQAQVISPVWH-------MAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 428 ~~~~~~~~A~~~~~~al~l~p~~~-------~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
..+|++++|+..++++++++|+++ .+|+++|.++..+|++++|++.|++|++++|+
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999998 77999999999999999999999999999987
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-13 Score=108.12 Aligned_cols=100 Identities=16% Similarity=0.133 Sum_probs=95.7
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCC--chHHHHHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV--WHMAAYLQAAAL 461 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~ 461 (488)
.+...|..++..|++++|+..|+++++++|. +..++.++|.++..+|++++|+..++++++++|+ ++.+++.+|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 86 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 3457899999999999999999999999999 9999999999999999999999999999999999 999999999999
Q ss_pred HHC-CCHHHHHHHHHHHHcccccc
Q 011353 462 FAL-GKENEAQAALREASILENKK 484 (488)
Q Consensus 462 ~~~-~~~~~A~~~~~~al~ld~~~ 484 (488)
..+ |++++|+++|+++++.+|..
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHhCCHHHHHHHHHHHhhcccCC
Confidence 999 99999999999999998864
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-14 Score=116.60 Aligned_cols=90 Identities=11% Similarity=0.047 Sum_probs=82.2
Q ss_pred hhcCHHHHHHHHHHHHhc---CCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHH
Q 011353 394 RHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEA 470 (488)
Q Consensus 394 ~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 470 (488)
..|++++|+..|++|+++ +|+ +..+++++|.+|..+|++++|+..|++|++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 688 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcccccc
Q 011353 471 QAALREASILENKK 484 (488)
Q Consensus 471 ~~~~~~al~ld~~~ 484 (488)
++.|+++++++|++
T Consensus 81 ~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 81 VELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999998754
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=5.1e-13 Score=108.85 Aligned_cols=103 Identities=24% Similarity=0.312 Sum_probs=97.6
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
....+...|..++..|++++|+..|++++..+|+ +..++.++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 89 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLA 89 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHH
Confidence 3445668899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHcccccc
Q 011353 461 LFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+..+|++++|+..|+++++++|+.
T Consensus 90 ~~~~~~~~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 90 LSSLNKHVEAVAYYKKALELDPDN 113 (131)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHhCCHHHHHHHHHHHHhcCccc
Confidence 999999999999999999998864
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.4e-13 Score=123.26 Aligned_cols=102 Identities=16% Similarity=0.078 Sum_probs=97.3
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCC-CCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGT-MVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
..+..+|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+..|++|++++|+++.+++.+|.+|
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 4567899999999999999999999999999 7 8899999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHccccccc
Q 011353 462 FALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
..+|++++|++.|+++++++|++.
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcH
Confidence 999999999999999999998753
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.4e-14 Score=135.41 Aligned_cols=107 Identities=13% Similarity=0.126 Sum_probs=94.6
Q ss_pred hhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCH-----------------HHHhhHHHHHHhcCChHHHHHHH
Q 011353 378 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP-----------------TAFARRSLSYLMSDMPQEALNDA 440 (488)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~~ 440 (488)
....+..+..+|+.+++.|+|++|+..|++|+.++|+ +. .+|+++|.||..+|+|++|+.+|
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~ 253 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHC 253 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3445667779999999999999999999999999998 65 48999999999999999999999
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 441 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
++|++++|+++.+|+++|.+|..+|++++|+++|++|++++|.+.
T Consensus 254 ~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~ 298 (338)
T 2if4_A 254 NIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDK 298 (338)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Confidence 999999999999999999999999999999999999999998654
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.47 E-value=1.2e-13 Score=135.37 Aligned_cols=103 Identities=10% Similarity=-0.054 Sum_probs=97.7
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCC-hHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM-PQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
...+..+|..+.+.|++++|++.|++||+++|+ +..+|+++|.++..+|+ +++|+..|++||+++|+++.+|+++|.+
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~ 175 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVL 175 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 334458999999999999999999999999999 99999999999999997 9999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccccccc
Q 011353 461 LFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+..+|++++|+.+|++|+++||++.
T Consensus 176 ~~~~g~~~eAl~~~~kal~ldP~~~ 200 (382)
T 2h6f_A 176 VEWLRDPSQELEFIADILNQDAKNY 200 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHccCHHHHHHHHHHHHHhCccCH
Confidence 9999999999999999999999763
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.46 E-value=3.9e-13 Score=117.47 Aligned_cols=131 Identities=18% Similarity=0.189 Sum_probs=113.2
Q ss_pred HHHHhcCCCccchhhhhhhhhhhhhhHhhhhH----HHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh
Q 011353 354 ILEKLGYKDDEGAATELSFQMWTGQMQETLNS----KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM 429 (488)
Q Consensus 354 ~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~ 429 (488)
.+..+|......+..+.+...+.++++..++. ...|..+++.|++++|+..+.+++..+|+ ...++..+|.++..
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 85 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFM 85 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHH
Confidence 34455555555566777777777777665443 38899999999999999999999999999 99999999999999
Q ss_pred cCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 430 SDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 430 ~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.++++.|+..++++++++|++..+++.+|.+|..+|++++|++.|+++++++|.+.
T Consensus 86 ~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~ 141 (184)
T 3vtx_A 86 IDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFI 141 (184)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhh
Confidence 99999999999999999999999999999999999999999999999999998653
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.3e-13 Score=111.39 Aligned_cols=112 Identities=8% Similarity=0.071 Sum_probs=98.7
Q ss_pred hHHHHHHHHhcCCCccchhhhhhhhhhhhhhHhhhhH----HHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHH
Q 011353 349 TAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNS----KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRS 424 (488)
Q Consensus 349 ~~~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~ 424 (488)
+..++.+...|......+.++.++..+.++++..+.. ..+|..+++.|++++|+..|++||+++|+ +..+|+++|
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg 88 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK-FIKGYIRKA 88 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-hhHHHHHHH
Confidence 3456667777766666777888888888888765544 38999999999999999999999999999 999999999
Q ss_pred HHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 425 LSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 425 ~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
.+|..+|++++|+++|++|++++|++..++..++.++
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 89 ACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999998874
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.46 E-value=4.7e-13 Score=119.76 Aligned_cols=118 Identities=13% Similarity=0.085 Sum_probs=102.5
Q ss_pred hhhhhhhhhhhhhhH-hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhH
Q 011353 366 AATELSFQMWTGQMQ-ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQ 444 (488)
Q Consensus 366 ~~~~~a~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 444 (488)
+..+.+...+.+++. ....+...|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|++.|++++
T Consensus 20 ~~~~~A~~~~~~a~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al 98 (213)
T 1hh8_A 20 KDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEAL 98 (213)
T ss_dssp TCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 334444444444432 2334558999999999999999999999999999 99999999999999999999999999999
Q ss_pred hhCCCch----------------HHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 445 VISPVWH----------------MAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 445 ~l~p~~~----------------~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
++.|++. .+++++|.+|..+|++++|++.|+++++++|+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 99 IQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp HTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred HhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 9888776 999999999999999999999999999999854
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.45 E-value=5.4e-13 Score=108.77 Aligned_cols=101 Identities=15% Similarity=0.153 Sum_probs=95.8
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc-------hHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW-------HMAA 454 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~-------~~a~ 454 (488)
+..+...|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|++ +.++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 445668899999999999999999999999999 99999999999999999999999999999999988 9999
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 455 YLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 455 ~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
+++|.++..+|++++|++.|+++++++|+
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999874
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.3e-13 Score=126.62 Aligned_cols=139 Identities=14% Similarity=-0.021 Sum_probs=109.0
Q ss_pred cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.|.+...+|.|+.+.||++... +..+++|+...........+.+|+.+++.+. +..++++++++.+.+..++||||++
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 3556666788888999999864 5789999987532122345889999999994 7788999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------ 174 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------------ 174 (488)
|.+|.+.+.. ......++.+++.+|..||+.
T Consensus 94 G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 94 GVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp SEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred CeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 9999876421 122346788999999999981
Q ss_pred ----------------CCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 175 ----------------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 175 ----------------~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
..++|+|++|.|||+++++.+.|+||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 248999999999999876556799998763
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.9e-13 Score=116.13 Aligned_cols=102 Identities=14% Similarity=0.117 Sum_probs=96.7
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHH-HHhcCCh--HHHHHHHHHhHhhCCCchHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS-YLMSDMP--QEALNDASQAQVISPVWHMAAYLQAA 459 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (488)
..+...|..++..|+|++|+..|+++++++|+ +..++.++|.+ +...|++ ++|+..++++++++|+++.+++.+|.
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 123 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLAS 123 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34558999999999999999999999999999 99999999999 8899999 99999999999999999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHccccccc
Q 011353 460 ALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+|..+|++++|+..|+++++++|.+.
T Consensus 124 ~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 124 DAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 99999999999999999999998653
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.42 E-value=3.5e-13 Score=136.40 Aligned_cols=104 Identities=25% Similarity=0.345 Sum_probs=97.7
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..+...|..+++.|+|++|++.|++|++++|+ +..+|+++|.+|..+|++++|++.+++|++++|+++.+++++|.+
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAAS 83 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4455668899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccccccc
Q 011353 461 LFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|..+|++++|++.|++|++++|+..
T Consensus 84 ~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 84 NMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999998653
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.41 E-value=3.7e-12 Score=102.71 Aligned_cols=101 Identities=19% Similarity=0.230 Sum_probs=96.0
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
..+...|..++..|++++|++.|+++++.+|. +..++..+|.++...|++++|+..++++++++|+++.+++.+|.++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 34557899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHcccccc
Q 011353 463 ALGKENEAQAALREASILENKK 484 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+|++++|+..|+++++++|..
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~ 110 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNN 110 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999998864
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-13 Score=109.28 Aligned_cols=94 Identities=17% Similarity=0.290 Sum_probs=88.4
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc------hHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------HMAAY 455 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~~ 455 (488)
+..+...|..++..|+|++|++.|++|++++|+ +..+++++|.++..+|++++|++.++++++++|++ ..+++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 445668999999999999999999999999999 99999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHCCCHHHHHHHHHH
Q 011353 456 LQAAALFALGKENEAQAALRE 476 (488)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~ 476 (488)
++|.++..+|++++|++.|++
T Consensus 83 ~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 83 RLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHhHhhhHhHHHH
Confidence 999999999999998877664
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-13 Score=143.77 Aligned_cols=119 Identities=11% Similarity=-0.054 Sum_probs=105.3
Q ss_pred chhhhhhhhhhhhhhHhhhh----HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHH
Q 011353 365 GAATELSFQMWTGQMQETLN----SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDA 440 (488)
Q Consensus 365 ~~~~~~a~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 440 (488)
.+..+.+...+.+++...++ +..+|..++..|+|++|++.|++|++++|+ +..+|+++|.+|..+|++++ ++.|
T Consensus 446 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~ 523 (681)
T 2pzi_A 446 LGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFY 523 (681)
T ss_dssp HTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHH
T ss_pred cCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHH
Confidence 34455666666666655443 348999999999999999999999999999 99999999999999999999 9999
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 441 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
++|++++|+++.+|+++|.+|..+|++++|+++|++|++++|...
T Consensus 524 ~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 568 (681)
T 2pzi_A 524 QTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFT 568 (681)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHH
T ss_pred HHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccH
Confidence 999999999999999999999999999999999999999998653
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-13 Score=116.28 Aligned_cols=88 Identities=10% Similarity=-0.167 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHH
Q 011353 397 DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALRE 476 (488)
Q Consensus 397 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 476 (488)
++-.+-..|+++++++|+ +..+++++|.++..+|++++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|++
T Consensus 17 ~~~~~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~ 95 (151)
T 3gyz_A 17 DAINSGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAV 95 (151)
T ss_dssp HHHHTSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHCCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 334444668999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHccccccc
Q 011353 477 ASILENKKS 485 (488)
Q Consensus 477 al~ld~~~~ 485 (488)
|++++|++.
T Consensus 96 al~l~P~~~ 104 (151)
T 3gyz_A 96 AFALGKNDY 104 (151)
T ss_dssp HHHHSSSCC
T ss_pred HHhhCCCCc
Confidence 999999754
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=6.9e-12 Score=116.51 Aligned_cols=102 Identities=13% Similarity=0.066 Sum_probs=97.2
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
...+...|..++..|++++|+..|+++++++|+ +..++.++|.+|..+|++++|+..|+++++++|+++.+++.+|.+|
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~ 121 (275)
T 1xnf_A 43 AQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIAL 121 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHH
Confidence 344558999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHcccccc
Q 011353 462 FALGKENEAQAALREASILENKK 484 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..+|++++|+..|+++++++|+.
T Consensus 122 ~~~g~~~~A~~~~~~a~~~~~~~ 144 (275)
T 1xnf_A 122 YYGGRDKLAQDDLLAFYQDDPND 144 (275)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHhccHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999998865
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.4e-12 Score=117.16 Aligned_cols=97 Identities=20% Similarity=0.253 Sum_probs=94.1
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 463 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (488)
.+...|..++..|++++|+..|+++++++|. +..++.++|.++..+|++++|+..++++++++|+++.+++.+|.++..
T Consensus 141 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 141 EARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 3448999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHccc
Q 011353 464 LGKENEAQAALREASILE 481 (488)
Q Consensus 464 ~~~~~~A~~~~~~al~ld 481 (488)
+|++++|++.|+++++++
T Consensus 220 ~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 220 VKEYASALETLDAARTKD 237 (258)
T ss_dssp TTCHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHhC
Confidence 999999999999999999
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.6e-12 Score=102.99 Aligned_cols=85 Identities=16% Similarity=0.108 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 011353 399 RASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREAS 478 (488)
Q Consensus 399 ~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 478 (488)
++|++.|+++++.+|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3689999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 011353 479 ILENKK 484 (488)
Q Consensus 479 ~ld~~~ 484 (488)
+++|..
T Consensus 81 ~~~~~~ 86 (115)
T 2kat_A 81 AAAQSR 86 (115)
T ss_dssp HHHHHH
T ss_pred Hhcccc
Confidence 998753
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.35 E-value=7.3e-12 Score=102.27 Aligned_cols=98 Identities=20% Similarity=0.259 Sum_probs=93.8
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 464 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 464 (488)
+...|..+...|++++|+..|++++..+|. +..++.++|.++...|++++|+..++++++++|++..+++.+|.++...
T Consensus 38 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 116 (136)
T 2fo7_A 38 WYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ 116 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH
Confidence 447789999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccccc
Q 011353 465 GKENEAQAALREASILENK 483 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld~~ 483 (488)
|++++|+..|+++++++|+
T Consensus 117 ~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 117 GDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp TCHHHHHHHHHHHHHHSTT
T ss_pred ccHHHHHHHHHHHHccCCC
Confidence 9999999999999999885
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.7e-12 Score=123.25 Aligned_cols=127 Identities=16% Similarity=0.193 Sum_probs=108.5
Q ss_pred HhcCCCccchhhhhhhhhhhhhhHhhhh------HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc
Q 011353 357 KLGYKDDEGAATELSFQMWTGQMQETLN------SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS 430 (488)
Q Consensus 357 ~~g~~~~~~~~~~~a~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~ 430 (488)
.++......+..+.+...+.+++...+. +...|..+...|++++|++.|+++++++|+ +..+|.++|.+|..+
T Consensus 182 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~ 260 (365)
T 4eqf_A 182 RMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANG 260 (365)
T ss_dssp -------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHc
Confidence 3444445556666666666666664433 458999999999999999999999999999 999999999999999
Q ss_pred CChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 431 DMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 431 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
|++++|+..|+++++++|+++.+++++|.+|..+|++++|+..|++|++++|+.
T Consensus 261 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 261 DRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999999999999999999999999999999864
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=132.23 Aligned_cols=130 Identities=13% Similarity=0.071 Sum_probs=109.2
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHhhh---hHHHhhhHHHhh---------cCHHHHHHHHHHHHhcCCCCCHHHHhh
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQETL---NSKKKGDVAFRH---------KDFRASIECYTQFIDVGTMVSPTAFAR 422 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~~~---~~~~~g~~~~~~---------~~~~~A~~~~~~ai~~~p~~~~~~~~~ 422 (488)
+..+|......+..+.+...+.+++...+ .+...|..+... |++++|++.|++|++++|+ +..+|++
T Consensus 140 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~ 218 (474)
T 4abn_A 140 WNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYI 218 (474)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHH
Confidence 33344333334445555555555554433 344889999999 9999999999999999999 9999999
Q ss_pred HHHHHHhc--------CChHHHHHHHHHhHhhCC---CchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 423 RSLSYLMS--------DMPQEALNDASQAQVISP---VWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 423 ~~~~~~~~--------~~~~~A~~~~~~al~l~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+|.+|..+ |++++|+..|++|++++| +++.+|+++|.+|..+|++++|++.|++|++++|++.
T Consensus 219 lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 219 LGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999 999999999999999999 9999999999999999999999999999999998753
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-11 Score=107.67 Aligned_cols=101 Identities=13% Similarity=0.080 Sum_probs=96.0
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 463 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (488)
.+...|..++..|++++|++.|+++++.+|. +..++..+|.++..+|++++|+..++++++++|+++.+++.+|.++..
T Consensus 78 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (186)
T 3as5_A 78 VATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ 156 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 3448899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHccccccc
Q 011353 464 LGKENEAQAALREASILENKKS 485 (488)
Q Consensus 464 ~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+|++++|+..|+++++++|+..
T Consensus 157 ~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 157 MGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp TTCHHHHHHHHHHHHHHHHCCC
T ss_pred cCCHHHHHHHHHHHHHcCCCch
Confidence 9999999999999999988654
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.33 E-value=8.8e-12 Score=111.41 Aligned_cols=100 Identities=15% Similarity=0.151 Sum_probs=92.4
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..+...|..++..|+|++|++.|++++ +| +..+++++|.+|..+|++++|+..|++|++++|+++.+++++|.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~ 80 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 80 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 34456689999999999999999999996 44 578999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHcccccc
Q 011353 461 LFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
|..+|++++|+++|++++++.|++
T Consensus 81 ~~~~~~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 81 YYQTEKYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHHcccHHHHHHHHHHHHHhCCCc
Confidence 999999999999999999988754
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=1.2e-11 Score=112.60 Aligned_cols=128 Identities=15% Similarity=0.133 Sum_probs=75.9
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHh----hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQE----TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS 430 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~ 430 (488)
+..+|......+....+...+.+.+.. ...+...|..++..|++++|+..|+++++++|+ +..++..+|.++..+
T Consensus 26 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~ 104 (243)
T 2q7f_A 26 GGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVVK 104 (243)
T ss_dssp ----------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHh
Confidence 334444433344444444444443332 223336677777777777777777777777777 677777777777777
Q ss_pred CChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 431 DMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 431 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
|++++|++.++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+
T Consensus 105 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 157 (243)
T 2q7f_A 105 EMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN 157 (243)
T ss_dssp TCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 77777777777777777777777777777777777777777777777776654
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-11 Score=112.96 Aligned_cols=132 Identities=11% Similarity=0.006 Sum_probs=91.2
Q ss_pred HHHHHHhcCCCccchhhhhhhhhhhhhhHh----hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHH
Q 011353 352 HEILEKLGYKDDEGAATELSFQMWTGQMQE----TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSY 427 (488)
Q Consensus 352 ~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~ 427 (488)
.+.+..+|......+..+.+...+.+++.. ...+...|..++..|++++|++.|+++++++|. +..++.++|.+|
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~ 115 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFL 115 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHH
Confidence 344444443333333334444444443332 223346777788888888888888888888887 777888888888
Q ss_pred HhcCChHHHHHHHHHhHh--hCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 428 LMSDMPQEALNDASQAQV--ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 428 ~~~~~~~~A~~~~~~al~--l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..+|++++|++.++++++ .+|.++.+++.+|.++..+|++++|++.|+++++++|..
T Consensus 116 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 116 YEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQ 174 (252)
T ss_dssp HHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccc
Confidence 888888888888888887 777777888888888888888888888888888777643
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=9e-12 Score=129.21 Aligned_cols=129 Identities=11% Similarity=-0.058 Sum_probs=92.1
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHhhhh----HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQETLN----SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS 430 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~ 430 (488)
+..+|......+..+.+...+.++++..++ +...|..++..|++++|++.|+++++++|+ +..+++++|.+|..+
T Consensus 26 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~ 104 (568)
T 2vsy_A 26 WLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDA 104 (568)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHc
Confidence 333443333334445555555555443332 337777788888888888888888888887 777888888888888
Q ss_pred CChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC---CCHHHHHHHHHHHHcccccc
Q 011353 431 DMPQEALNDASQAQVISPVWHMAAYLQAAALFAL---GKENEAQAALREASILENKK 484 (488)
Q Consensus 431 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~---~~~~~A~~~~~~al~ld~~~ 484 (488)
|++++|++.|+++++++|+++.+++++|.++..+ |++++|++.|+++++++|..
T Consensus 105 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 105 GQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 8888888888888888888888888888888888 88888888888888777754
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.2e-11 Score=107.05 Aligned_cols=129 Identities=12% Similarity=0.050 Sum_probs=106.7
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHh----hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQE----TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS 430 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~ 430 (488)
+..+|......+....+...+...+.. ...+...|..++..|++++|+..|+++++.+|. +..++.++|.++...
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~ 89 (186)
T 3as5_A 11 YRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQV 89 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHh
Confidence 333343333333344444444444332 334458899999999999999999999999999 999999999999999
Q ss_pred CChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 431 DMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 431 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
|++++|++.++++++++|+++.+++.+|.++..+|++++|+..|+++++++|..
T Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 90 QKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccc
Confidence 999999999999999999999999999999999999999999999999998754
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.30 E-value=9.1e-12 Score=115.39 Aligned_cols=131 Identities=10% Similarity=0.034 Sum_probs=108.5
Q ss_pred HHHHhcCCCccchhhhhhhhhhhhhhHh-------hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC--CHHHHhhHH
Q 011353 354 ILEKLGYKDDEGAATELSFQMWTGQMQE-------TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--SPTAFARRS 424 (488)
Q Consensus 354 ~l~~~g~~~~~~~~~~~a~~~~~~~~~~-------~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~ 424 (488)
.+...|......+....+...+...+.. ...+...|..+++.|+|++|+..|++++++.|++ ...+++++|
T Consensus 17 ~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg 96 (261)
T 3qky_A 17 EAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERA 96 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHH
Confidence 3444454444455566666666666654 3344589999999999999999999999998852 367899999
Q ss_pred HHHHh--------cCChHHHHHHHHHhHhhCCCchHHH-----------------HHHHHHHHHCCCHHHHHHHHHHHHc
Q 011353 425 LSYLM--------SDMPQEALNDASQAQVISPVWHMAA-----------------YLQAAALFALGKENEAQAALREASI 479 (488)
Q Consensus 425 ~~~~~--------~~~~~~A~~~~~~al~l~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~ 479 (488)
.++.. +|++++|+..|+++++++|++..+. +.+|.+|..+|++++|+..|+++++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 176 (261)
T 3qky_A 97 MCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFD 176 (261)
T ss_dssp HHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 99999 9999999999999999999997776 8899999999999999999999999
Q ss_pred ccccc
Q 011353 480 LENKK 484 (488)
Q Consensus 480 ld~~~ 484 (488)
..|+.
T Consensus 177 ~~p~~ 181 (261)
T 3qky_A 177 AYPDT 181 (261)
T ss_dssp HCTTS
T ss_pred HCCCC
Confidence 98863
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.30 E-value=5.3e-12 Score=117.12 Aligned_cols=126 Identities=14% Similarity=0.087 Sum_probs=96.7
Q ss_pred CCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCC--cccEEEEEeeCCeeEEEEecCCCCCHHhh
Q 011353 66 GEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGCCCEGDERLLVAEYMPNDTLAKH 143 (488)
Q Consensus 66 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~E~~~~gsL~~~ 143 (488)
+.|..+.||++...+|..++||+..... ...+.+|+.+++.+.+.+ +++++++....+..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 4566799999987777889999976542 235778999999995434 667899888888899999999998884
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC------------------------------------------------
Q 011353 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKE------------------------------------------------ 175 (488)
Q Consensus 144 l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------------------------ 175 (488)
.. . .+ ...++.+++..|..||+..
T Consensus 104 ~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 21 1 12 2356777888888888641
Q ss_pred ---------CcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 176 ---------RALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 176 ---------~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
.++|+|++|.|||+++++.+.|+|||.+.
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 28999999999999877667799999864
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.3e-11 Score=114.45 Aligned_cols=102 Identities=12% Similarity=0.063 Sum_probs=95.6
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC---HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc---hHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW---HMAAY 455 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~ 455 (488)
...+..+|..+++.|+|++|+..|+++++.+|+ + ..+++.+|.+|..+|++++|+..|+++++++|++ +.+++
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~ 93 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEY 93 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHH
Confidence 456679999999999999999999999999999 7 8899999999999999999999999999998854 78999
Q ss_pred HHHHHHHH--------CCCHHHHHHHHHHHHcccccc
Q 011353 456 LQAAALFA--------LGKENEAQAALREASILENKK 484 (488)
Q Consensus 456 ~~g~~~~~--------~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+|.+++. +|++++|+..|+++++++|+.
T Consensus 94 ~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 94 ERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp HHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 99999999 999999999999999999865
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1e-11 Score=119.88 Aligned_cols=129 Identities=11% Similarity=0.034 Sum_probs=109.6
Q ss_pred HHHHHHHhcCCCccchhhhhhhhhhhhhhHhhhh-------------------HHHhhhHHHhhcCHHHHHHHHHHHHhc
Q 011353 351 IHEILEKLGYKDDEGAATELSFQMWTGQMQETLN-------------------SKKKGDVAFRHKDFRASIECYTQFIDV 411 (488)
Q Consensus 351 ~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~-------------------~~~~g~~~~~~~~~~~A~~~~~~ai~~ 411 (488)
....+..+|......+.+..+...+.+++...+. +.++|..+++.|+|++|+..|++||++
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4455556665555556666677666666655433 348999999999999999999999999
Q ss_pred CCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHH-HHHHHHHHcc
Q 011353 412 GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEA-QAALREASIL 480 (488)
Q Consensus 412 ~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l 480 (488)
+|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++.++|.++..+|++++| .+.|++++..
T Consensus 226 ~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 226 DSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp CTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999 5577777654
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.8e-12 Score=98.90 Aligned_cols=92 Identities=12% Similarity=0.049 Sum_probs=85.4
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHH-HHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT-AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 463 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (488)
...+|..++..|+|++|++.|+++++++|+ +.. +++++|.+|..+|++++|++.|+++++++|+++.++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 346899999999999999999999999999 899 99999999999999999999999999999999999865
Q ss_pred CCCHHHHHHHHHHHHccccccc
Q 011353 464 LGKENEAQAALREASILENKKS 485 (488)
Q Consensus 464 ~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+.+.+|+..|+++++++|...
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCS
T ss_pred -HHHHHHHHHHHHHhccCcccc
Confidence 778899999999999988654
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.4e-11 Score=119.88 Aligned_cols=102 Identities=14% Similarity=0.040 Sum_probs=97.7
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
...+..+|..+++.|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+++.+|.+|
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSY 143 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 345678999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHcccccc
Q 011353 462 FALGKENEAQAALREASILENKK 484 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..+|++++|++.|+++++++|+.
T Consensus 144 ~~~g~~~~A~~~~~~al~~~p~~ 166 (365)
T 4eqf_A 144 TNTSHQQDACEALKNWIKQNPKY 166 (365)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHH
T ss_pred HccccHHHHHHHHHHHHHhCccc
Confidence 99999999999999999998864
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.28 E-value=6.1e-12 Score=127.37 Aligned_cols=126 Identities=12% Similarity=0.107 Sum_probs=107.8
Q ss_pred HHHhcCCCccchhh-hhhhhhhhhhhHhhh----hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh
Q 011353 355 LEKLGYKDDEGAAT-ELSFQMWTGQMQETL----NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM 429 (488)
Q Consensus 355 l~~~g~~~~~~~~~-~~a~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~ 429 (488)
+..+|......+.+ +.+...+.+++...+ .+...|..++..|++++|++.|++|++++|+ ..++.++|.+|..
T Consensus 105 ~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~lg~~~~~ 182 (474)
T 4abn_A 105 LMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN--KVSLQNLSMVLRQ 182 (474)
T ss_dssp HHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC--HHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--HHHHHHHHHHHHH
Confidence 33444333334445 566666666655544 3459999999999999999999999999998 5999999999999
Q ss_pred c---------CChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcccc
Q 011353 430 S---------DMPQEALNDASQAQVISPVWHMAAYLQAAALFAL--------GKENEAQAALREASILEN 482 (488)
Q Consensus 430 ~---------~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~--------~~~~~A~~~~~~al~ld~ 482 (488)
+ |++++|++.|++|++++|+++.+|+++|.+|..+ |++++|++.|++|++++|
T Consensus 183 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p 252 (474)
T 4abn_A 183 LQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDR 252 (474)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCG
T ss_pred hccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCC
Confidence 9 9999999999999999999999999999999999 999999999999999998
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.9e-11 Score=111.22 Aligned_cols=101 Identities=13% Similarity=0.063 Sum_probs=96.3
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 463 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (488)
.+...|..++..|++++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|+++.+++.+|.+|..
T Consensus 127 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 205 (243)
T 2q7f_A 127 LFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY 205 (243)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 3458899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHccccccc
Q 011353 464 LGKENEAQAALREASILENKKS 485 (488)
Q Consensus 464 ~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+|++++|++.|+++++++|+..
T Consensus 206 ~~~~~~A~~~~~~~~~~~p~~~ 227 (243)
T 2q7f_A 206 KENREKALEMLDKAIDIQPDHM 227 (243)
T ss_dssp TTCTTHHHHHHHHHHHHCTTCH
T ss_pred ccCHHHHHHHHHHHHccCcchH
Confidence 9999999999999999998653
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=3.2e-12 Score=107.70 Aligned_cols=85 Identities=8% Similarity=-0.035 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHc
Q 011353 400 ASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASI 479 (488)
Q Consensus 400 ~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 479 (488)
.+-..|++++.++|+ +...++++|.++...|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+++|++|++
T Consensus 5 ~~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 5 SGGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp -CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 334568999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 011353 480 LENKKS 485 (488)
Q Consensus 480 ld~~~~ 485 (488)
++|++.
T Consensus 84 l~p~~~ 89 (148)
T 2vgx_A 84 MDIXEP 89 (148)
T ss_dssp HSTTCT
T ss_pred cCCCCc
Confidence 998753
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=96.82 Aligned_cols=73 Identities=12% Similarity=0.045 Sum_probs=66.4
Q ss_pred cCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 411 VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 411 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+|+ +..+++++|.+|..+|++++|+..|++|++++|+++.+|+++|.+|..+|++++|++.|++|++++|+.
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 4788 899999999999999999999999999999999999999999999999999999999999999997643
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.27 E-value=2.2e-11 Score=103.80 Aligned_cols=130 Identities=12% Similarity=0.038 Sum_probs=106.5
Q ss_pred HHHHHHHhcCCCccchhhhhhhhhhhhhhHhhh----hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHH
Q 011353 351 IHEILEKLGYKDDEGAATELSFQMWTGQMQETL----NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS 426 (488)
Q Consensus 351 ~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~ 426 (488)
..+.+..+|......+....+...+..++...+ .+...|..++..|+|++|+..|+++++++|+ +..+++++|.+
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~ 90 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAAS 90 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHH
Confidence 344555556544445555666666665555433 3448999999999999999999999999999 99999999999
Q ss_pred HHhcCChHHHHHHHHHhHhhCCCchHHHHHHHH--HHHHCCCHHHHHHHHHHHHccc
Q 011353 427 YLMSDMPQEALNDASQAQVISPVWHMAAYLQAA--ALFALGKENEAQAALREASILE 481 (488)
Q Consensus 427 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~--~~~~~~~~~~A~~~~~~al~ld 481 (488)
+..+|++++|+..++++++++|++..++..++. .+...|++++|++.++++..+-
T Consensus 91 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 91 NMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHh
Confidence 999999999999999999999999999955554 4889999999999999987663
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.6e-11 Score=115.96 Aligned_cols=132 Identities=12% Similarity=0.003 Sum_probs=101.2
Q ss_pred HHHHHhcCCCccchhhhhhhhhhhhhhHh----------hhhHHHhhhHHHhh-cCHHHHHHHHHHHHhcCCCCC-----
Q 011353 353 EILEKLGYKDDEGAATELSFQMWTGQMQE----------TLNSKKKGDVAFRH-KDFRASIECYTQFIDVGTMVS----- 416 (488)
Q Consensus 353 ~~l~~~g~~~~~~~~~~~a~~~~~~~~~~----------~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~~~p~~~----- 416 (488)
..+..+|......+..+.++..+.+++.. +..+...|..+... |++++|+..|++|+++.|...
T Consensus 78 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~ 157 (292)
T 1qqe_A 78 NTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALS 157 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHH
Confidence 33444443333334444455544444443 23455889999996 999999999999999988621
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchH-------HHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 417 PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM-------AAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~-------a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..++.++|.+|..+|++++|+..|++++++.|++.. +++++|.++..+|++++|+.+|+++++++|..
T Consensus 158 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 158 NKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 567999999999999999999999999999998754 68899999999999999999999999999864
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=2e-11 Score=119.93 Aligned_cols=117 Identities=14% Similarity=0.094 Sum_probs=99.2
Q ss_pred hhhhhhhhhhhhhHhhh----hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHH
Q 011353 367 ATELSFQMWTGQMQETL----NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 442 (488)
Q Consensus 367 ~~~~a~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 442 (488)
..+.+...+.+++...+ .+...|..+.+.|++++|++.|+++++++|+ +..++.++|.++...|++++|+..+++
T Consensus 252 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~ 330 (388)
T 1w3b_A 252 LIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRK 330 (388)
T ss_dssp CHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34445555555444332 3447888999999999999999999999999 899999999999999999999999999
Q ss_pred hHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 443 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 443 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+++++|+++.+++++|.+|..+|++++|++.|+++++++|+.
T Consensus 331 al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 331 ALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp HTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTC
T ss_pred HHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999999999999998864
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.8e-12 Score=112.45 Aligned_cols=102 Identities=12% Similarity=0.063 Sum_probs=90.0
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH-
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA- 460 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~- 460 (488)
...+...+..+...|++++|+..|+++++.+|+ +..+++.+|.+|..+|++++|+..|+++++++|+++.+++.+|.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l 88 (177)
T 2e2e_A 10 YQRQRDPLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVL 88 (177)
T ss_dssp CCCSSTTTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred HHHHhhhhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 334446667788899999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCH--HHHHHHHHHHHcccccc
Q 011353 461 LFALGKE--NEAQAALREASILENKK 484 (488)
Q Consensus 461 ~~~~~~~--~~A~~~~~~al~ld~~~ 484 (488)
+...|++ ++|+..|+++++++|.+
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 89 YYQASQHMTAQTRAMIDKALALDSNE 114 (177)
T ss_dssp HHHTTTCCCHHHHHHHHHHHHHCTTC
T ss_pred HHhcCCcchHHHHHHHHHHHHhCCCc
Confidence 8899999 99999999999999865
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=2.2e-11 Score=126.31 Aligned_cols=101 Identities=21% Similarity=0.064 Sum_probs=97.0
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
..+...|..++..|+|++|++.|++|++++|+ +..+++++|.+|..+|++++|++.|++|++++|+++.+++++|.+|.
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 102 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE 102 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34558899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHcccccc
Q 011353 463 ALGKENEAQAALREASILENKK 484 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+|++++|++.|+++++++|++
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999865
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.26 E-value=5.7e-11 Score=96.81 Aligned_cols=99 Identities=20% Similarity=0.257 Sum_probs=94.0
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 464 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 464 (488)
+...|..++..|++++|+..|+++++.+|. +...+..+|.++...|++++|+..++++++++|+++.+++.+|.++...
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ 82 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHh
Confidence 346788999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHcccccc
Q 011353 465 GKENEAQAALREASILENKK 484 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld~~~ 484 (488)
|++++|++.|+++++++|..
T Consensus 83 ~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 83 GDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999988754
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.26 E-value=3.7e-11 Score=116.72 Aligned_cols=117 Identities=14% Similarity=0.164 Sum_probs=104.1
Q ss_pred hhhhhhhhhhhhhHhhhh------HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHH
Q 011353 367 ATELSFQMWTGQMQETLN------SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDA 440 (488)
Q Consensus 367 ~~~~a~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 440 (488)
....+...+.+++...+. +...|..++..|++++|+..|+++++++|+ +..+++++|.++..+|++++|+..|
T Consensus 196 ~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~ 274 (368)
T 1fch_A 196 LFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAY 274 (368)
T ss_dssp HHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 344455555555444333 448899999999999999999999999999 9999999999999999999999999
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 441 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+++++++|+++.+++++|.+|..+|++++|+..|+++++++|+.
T Consensus 275 ~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 275 RRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999998865
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.6e-11 Score=114.48 Aligned_cols=117 Identities=9% Similarity=-0.011 Sum_probs=96.3
Q ss_pred hhhhhhhhhhhhhHhhhhHH--Hhh----hHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHH
Q 011353 367 ATELSFQMWTGQMQETLNSK--KKG----DVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDA 440 (488)
Q Consensus 367 ~~~~a~~~~~~~~~~~~~~~--~~g----~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 440 (488)
..+.+...+.......++.. ..+ ..+...|++++|+..|+++++.+|+ +..+++++|.++..+|++++|++.+
T Consensus 145 ~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l 223 (291)
T 3mkr_A 145 RLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVL 223 (291)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34444444444444433321 222 3333458999999999999999999 9999999999999999999999999
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHCCCHHH-HHHHHHHHHcccccc
Q 011353 441 SQAQVISPVWHMAAYLQAAALFALGKENE-AQAALREASILENKK 484 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~-A~~~~~~al~ld~~~ 484 (488)
++|++++|+++.+++++|.++..+|++++ |.+.++++++++|+.
T Consensus 224 ~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 224 QEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSH 268 (291)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999987 568999999999975
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=3e-11 Score=118.67 Aligned_cols=116 Identities=14% Similarity=0.055 Sum_probs=101.5
Q ss_pred hhhhhhhhhhhhHhhh----hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHh
Q 011353 368 TELSFQMWTGQMQETL----NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQA 443 (488)
Q Consensus 368 ~~~a~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 443 (488)
.+.+...+.+++...+ .+...|..++..|++++|++.|+++++++|+ +..+|.++|.++..+|++++|++.|+++
T Consensus 219 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a 297 (388)
T 1w3b_A 219 FDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTA 297 (388)
T ss_dssp TTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS-CHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3444444444444333 3348899999999999999999999999999 9999999999999999999999999999
Q ss_pred HhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 444 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 444 l~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
++++|+++.+++++|.++...|++++|++.|+++++++|+.
T Consensus 298 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 338 (388)
T 1w3b_A 298 LRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF 338 (388)
T ss_dssp HHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTC
T ss_pred HhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999998864
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.6e-11 Score=111.23 Aligned_cols=100 Identities=18% Similarity=0.098 Sum_probs=92.9
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHh--------------------------cCCCCCHHHHhhHHHHHHhcCChHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFID--------------------------VGTMVSPTAFARRSLSYLMSDMPQEAL 437 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~--------------------------~~p~~~~~~~~~~~~~~~~~~~~~~A~ 437 (488)
.+...|..+...|++++|+..|+++++ .+|. +..++.++|.++...|++++|+
T Consensus 81 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~ 159 (258)
T 3uq3_A 81 SFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPNAV 159 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHHHH
Confidence 344889999999999999999999998 6677 7889999999999999999999
Q ss_pred HHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 438 NDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 438 ~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+.
T Consensus 160 ~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 206 (258)
T 3uq3_A 160 KAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF 206 (258)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH
Confidence 99999999999999999999999999999999999999999998864
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.2e-11 Score=117.45 Aligned_cols=145 Identities=14% Similarity=0.139 Sum_probs=109.2
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcC--CCC-CccHHHHHHHHHHHhccC--CCCcccEEEEEeeC---Ce
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFN--RSA-WPDARQFLEEARAVGQLR--NRRLANLLGCCCEG---DE 127 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~ 127 (488)
+.....+..++.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.|. +..+++++.++.+. +.
T Consensus 37 ~~~~~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~ 115 (359)
T 3dxp_A 37 FAGPLSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR 115 (359)
T ss_dssp CCCCCEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred CCCCceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence 3334456778999999999998755 478888876 322 122346888999999996 45688999998776 45
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC---------------------------------
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--------------------------------- 174 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------------------------------- 174 (488)
.++||||++|.++.+.. -..++...+..++.++++.|..||+.
T Consensus 116 ~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp CEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 89999999998775432 12477888899999999999999971
Q ss_pred ------------------------CCcccccccCcceeeCCCCC--eeeecCCCccc
Q 011353 175 ------------------------ERALYHDLNAYRIVFDDDVN--PRLSCFGLMKN 205 (488)
Q Consensus 175 ------------------------~~iiH~Dlkp~Nill~~~~~--~kl~DfGla~~ 205 (488)
..++|+|++|.|||++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 36899999999999987653 68999998754
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.1e-11 Score=109.27 Aligned_cols=103 Identities=8% Similarity=-0.001 Sum_probs=93.2
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC--HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchH---HHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS--PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM---AAYLQ 457 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~---a~~~~ 457 (488)
..+..+|..+++.|+|++|+..|+++++..|+.. ..+++++|.+|..+|++++|+..|+++++++|+++. +++.+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~ 84 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMR 84 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHH
Confidence 3456889999999999999999999999999822 478999999999999999999999999999999875 89999
Q ss_pred HHHHHH------------------CCCHHHHHHHHHHHHccccccc
Q 011353 458 AAALFA------------------LGKENEAQAALREASILENKKS 485 (488)
Q Consensus 458 g~~~~~------------------~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|.++.. +|++++|+..|+++++.+|+..
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 85 GLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp HHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred HHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 999986 6799999999999999998753
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.3e-11 Score=105.52 Aligned_cols=117 Identities=13% Similarity=0.019 Sum_probs=89.9
Q ss_pred hhhhhhhhhhhhhhHhhhhH----HHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHH-HHhcCChHHHHHHH
Q 011353 366 AATELSFQMWTGQMQETLNS----KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS-YLMSDMPQEALNDA 440 (488)
Q Consensus 366 ~~~~~a~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~ 440 (488)
+..+.+...+.+.+...++. ...|..+...|++++|+..|++++.++| +..++...+.+ +...++..+|+..+
T Consensus 20 g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~ 97 (176)
T 2r5s_A 20 GEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRL 97 (176)
T ss_dssp TCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHH
Confidence 34455555555555554443 4888899999999999999999998888 34555555533 22333444688999
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 441 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+++++++|+++.+++++|.++..+|++++|+..|+++++++|..
T Consensus 98 ~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 98 EQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999999999999999999864
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.25 E-value=1e-11 Score=115.27 Aligned_cols=98 Identities=10% Similarity=0.039 Sum_probs=70.1
Q ss_pred HHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCC
Q 011353 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG 465 (488)
Q Consensus 386 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 465 (488)
...|..+...|++++|++.|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++++|...+..+
T Consensus 78 ~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~ 156 (272)
T 3u4t_A 78 EYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNK 156 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH
Confidence 46677777777777777777777777777 67777777777777777777777777777777777777777774444445
Q ss_pred CHHHHHHHHHHHHcccccc
Q 011353 466 KENEAQAALREASILENKK 484 (488)
Q Consensus 466 ~~~~A~~~~~~al~ld~~~ 484 (488)
++++|++.|+++++++|+.
T Consensus 157 ~~~~A~~~~~~a~~~~p~~ 175 (272)
T 3u4t_A 157 EYVKADSSFVKVLELKPNI 175 (272)
T ss_dssp CHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHhCccc
Confidence 7777777777777776654
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=4.3e-11 Score=112.70 Aligned_cols=97 Identities=10% Similarity=-0.054 Sum_probs=68.1
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGK 466 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 466 (488)
..|..+...|++++|+..|++++..+|+ ....+.+.+..+...++.++|++.++++++++|+++.+++++|.+|...|+
T Consensus 156 ~la~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~ 234 (287)
T 3qou_A 156 LLAETLIALNRSEDAEAVLXTIPLQDQD-TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGR 234 (287)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTSCGGGCS-HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCHHHHHHHHHhCchhhcc-hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHccc
Confidence 4444455555555555555555555554 444444444444444555555666777788899999999999999999999
Q ss_pred HHHHHHHHHHHHcccccc
Q 011353 467 ENEAQAALREASILENKK 484 (488)
Q Consensus 467 ~~~A~~~~~~al~ld~~~ 484 (488)
+++|++.|+++++++|..
T Consensus 235 ~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 235 NEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHHHHCTTG
T ss_pred HHHHHHHHHHHHhccccc
Confidence 999999999999999875
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.5e-11 Score=115.19 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=96.7
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
...+...|..++..|+|++|+..|+++++.+|+ +..+++++|.++..+|++++|+..++++++++|+++.+++.+|.++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 81 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLL 81 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 345678999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHcccc
Q 011353 462 FALGKENEAQAALREASILEN 482 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~ 482 (488)
..+|++++|+..|+++++++|
T Consensus 82 ~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 82 LKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHTCHHHHHHHHHHHHTSCC
T ss_pred HHcCChHHHHHHHHHHHhcCC
Confidence 999999999999999999998
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.24 E-value=6.1e-11 Score=106.28 Aligned_cols=95 Identities=9% Similarity=-0.032 Sum_probs=48.9
Q ss_pred HhhhHHHhh-cCHHHHHHHHHHHHh--cCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH
Q 011353 387 KKGDVAFRH-KDFRASIECYTQFID--VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 463 (488)
Q Consensus 387 ~~g~~~~~~-~~~~~A~~~~~~ai~--~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (488)
..|..++.. |++++|+..|+++++ .+|. ...++.++|.++..+|++++|+..++++++++|+++.+++.+|.++..
T Consensus 81 ~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 159 (225)
T 2vq2_A 81 NYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKML 159 (225)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Confidence 444455555 555555555555555 3333 344555555555555555555555555555555555555555555555
Q ss_pred CCCHHHHHHHHHHHHcccc
Q 011353 464 LGKENEAQAALREASILEN 482 (488)
Q Consensus 464 ~~~~~~A~~~~~~al~ld~ 482 (488)
+|++++|++.|+++++++|
T Consensus 160 ~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 160 AGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HTCHHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHhCC
Confidence 5555555555555555444
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.24 E-value=5.3e-12 Score=127.72 Aligned_cols=129 Identities=13% Similarity=0.085 Sum_probs=108.1
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHhhhh----HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQETLN----SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS 430 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~ 430 (488)
+..+|......+.++.+...+.++++..++ +..+|..+++.|+|++|++.|++|++++|+ +..+++++|.+|..+
T Consensus 9 ~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~ 87 (477)
T 1wao_1 9 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMAL 87 (477)
T ss_dssp SSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHc
Confidence 444555555666777777777777766544 448999999999999999999999999999 999999999999999
Q ss_pred CChHHHHHHHHHhHhhCCCchHHHHHHHHH--HHHCCCHHHHHHHHH-----------HHHcccccc
Q 011353 431 DMPQEALNDASQAQVISPVWHMAAYLQAAA--LFALGKENEAQAALR-----------EASILENKK 484 (488)
Q Consensus 431 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~--~~~~~~~~~A~~~~~-----------~al~ld~~~ 484 (488)
|++++|++.|++|++++|++..++.++|.+ +...|++++|++.++ ++++++|+.
T Consensus 88 g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 88 GKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 999999999999999999999999999998 889999999999999 888877654
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=6.5e-11 Score=109.82 Aligned_cols=131 Identities=14% Similarity=0.095 Sum_probs=104.0
Q ss_pred HHHHHhcCCCccchhhhhhhhhhhhhhHhh----hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHH
Q 011353 353 EILEKLGYKDDEGAATELSFQMWTGQMQET----LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYL 428 (488)
Q Consensus 353 ~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~ 428 (488)
..+..+|......+....+...+.+++... ..+...|..++..|++++|+..|+++++++|+ +..++.++|.+|.
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~ 122 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALY 122 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHH
Confidence 344444544444445555666555555543 33448999999999999999999999999999 8999999999999
Q ss_pred hcCChHHHHHHHHHhHhhCCCch---------------------------------------------------------
Q 011353 429 MSDMPQEALNDASQAQVISPVWH--------------------------------------------------------- 451 (488)
Q Consensus 429 ~~~~~~~A~~~~~~al~l~p~~~--------------------------------------------------------- 451 (488)
.+|++++|+..++++++++|++.
T Consensus 123 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 202 (275)
T 1xnf_A 123 YGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKA 202 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999999999999874
Q ss_pred -------------HHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 452 -------------MAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 452 -------------~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+++.+|.+|..+|++++|+..|+++++++|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 248 (275)
T 1xnf_A 203 DATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHN 248 (275)
T ss_dssp HCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTT
T ss_pred HhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchh
Confidence 566777888888888888888888888887753
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2.9e-11 Score=109.45 Aligned_cols=126 Identities=10% Similarity=0.017 Sum_probs=102.7
Q ss_pred hcCCCccchhhhhhhhhhhhhhHhh-------hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCH---HHHhhHHHHH
Q 011353 358 LGYKDDEGAATELSFQMWTGQMQET-------LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP---TAFARRSLSY 427 (488)
Q Consensus 358 ~g~~~~~~~~~~~a~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~ 427 (488)
.|......+.+..+...+...+... ..+..+|..+++.|+|++|+..|+++++.+|+ +. .+++.+|.++
T Consensus 10 ~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~ 88 (225)
T 2yhc_A 10 TAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTN 88 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHH
Confidence 3333333445566666666655432 23458899999999999999999999999999 54 3788999998
Q ss_pred Hh------------------cCChHHHHHHHHHhHhhCCCchHHH-----------------HHHHHHHHHCCCHHHHHH
Q 011353 428 LM------------------SDMPQEALNDASQAQVISPVWHMAA-----------------YLQAAALFALGKENEAQA 472 (488)
Q Consensus 428 ~~------------------~~~~~~A~~~~~~al~l~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~ 472 (488)
.. +|++++|+..|+++++.+|+++.++ +.+|.+|+..|++++|+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 168 (225)
T 2yhc_A 89 MALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVN 168 (225)
T ss_dssp HHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 86 5799999999999999999998665 678999999999999999
Q ss_pred HHHHHHcccccc
Q 011353 473 ALREASILENKK 484 (488)
Q Consensus 473 ~~~~al~ld~~~ 484 (488)
.|+++++..|+.
T Consensus 169 ~~~~~l~~~p~~ 180 (225)
T 2yhc_A 169 RVEGMLRDYPDT 180 (225)
T ss_dssp HHHHHHHHSTTS
T ss_pred HHHHHHHHCcCC
Confidence 999999998764
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.9e-11 Score=114.20 Aligned_cols=103 Identities=8% Similarity=-0.199 Sum_probs=92.0
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC-----CHHHHhhHHHHHHhc-CChHHHHHHHHHhHhhCCCc-----
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMS-DMPQEALNDASQAQVISPVW----- 450 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~l~p~~----- 450 (488)
+..+.+.|..+...|++++|+..|++|+++.|.. ...++.++|.+|..+ |++++|+..|++|+++.|+.
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~ 156 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVAL 156 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHH
Confidence 3455589999999999999999999999998751 156899999999996 99999999999999998865
Q ss_pred -hHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 451 -HMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 451 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..++.++|.+|..+|+|++|+..|+++++++|+.
T Consensus 157 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999998754
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.5e-11 Score=111.63 Aligned_cols=93 Identities=15% Similarity=0.101 Sum_probs=65.5
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHH-HHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRS-LSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG 465 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~-~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 465 (488)
..|..++..|++++|+..|+++++++|. +..+++++| .+|.. +++++|++.++++++++|+++.+++.+|.++..+|
T Consensus 113 ~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~ 190 (272)
T 3u4t_A 113 QIGSYFYNKGNFPLAIQYMEKQIRPTTT-DPKVFYELGQAYYYN-KEYVKADSSFVKVLELKPNIYIGYLWRARANAAQD 190 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHGGGCCSSCC-CHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHccCHHHHHHHHHHHhhcCCC-cHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC
Confidence 6677777777777777777777777777 677777777 44444 47777777777777777777777777777777777
Q ss_pred C---HHHHHHHHHHHHccc
Q 011353 466 K---ENEAQAALREASILE 481 (488)
Q Consensus 466 ~---~~~A~~~~~~al~ld 481 (488)
+ +++|+..|++++++.
T Consensus 191 ~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 191 PDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp TTCSSCTTHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHH
Confidence 6 666777777777664
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.22 E-value=7.7e-11 Score=114.44 Aligned_cols=102 Identities=10% Similarity=0.037 Sum_probs=97.3
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
..+..+|..++..|++++|+..|+++++++|+ +..++.++|.++..+|++++|+..|+++++++|+++.+++.+|.+|.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 143 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFT 143 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34568999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHccccccc
Q 011353 463 ALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.+|++++|++.|+++++++|+..
T Consensus 144 ~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 144 NESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTTG
T ss_pred HcCCHHHHHHHHHHHHHhCcCcH
Confidence 99999999999999999988653
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.22 E-value=7.6e-11 Score=119.84 Aligned_cols=102 Identities=22% Similarity=0.276 Sum_probs=97.3
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 459 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (488)
..+..+..+|..+++.|+|++|+..|+++++.+|+ ..+|.++|.++..+|++++|+..++++++++|+++.+++.+|.
T Consensus 4 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 81 (514)
T 2gw1_A 4 KYALALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRAS 81 (514)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 45677889999999999999999999999999985 8899999999999999999999999999999999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHccccc
Q 011353 460 ALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
+|..+|++++|+..|+++++++|.
T Consensus 82 ~~~~~g~~~~A~~~~~~~~~~~~~ 105 (514)
T 2gw1_A 82 ANEGLGKFADAMFDLSVLSLNGDF 105 (514)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSSC
T ss_pred HHHHHhhHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999874
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.22 E-value=8.1e-11 Score=113.38 Aligned_cols=99 Identities=14% Similarity=0.107 Sum_probs=92.5
Q ss_pred HHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHH----HHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT----AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 386 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~----~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
...|..+++.|++++|+..|+++++.+|+ +.. ++..+|.++..+|++++|+..++++++++|+++.+++.+|.++
T Consensus 238 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (359)
T 3ieg_A 238 IESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAY 316 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35689999999999999999999999999 763 4678999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHccccccc
Q 011353 462 FALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
..+|++++|++.|+++++++|++.
T Consensus 317 ~~~g~~~~A~~~~~~a~~~~p~~~ 340 (359)
T 3ieg_A 317 LIEEMYDEAIQDYEAAQEHNENDQ 340 (359)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999998753
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.21 E-value=8.7e-11 Score=107.68 Aligned_cols=95 Identities=12% Similarity=0.039 Sum_probs=53.5
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHh--cCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFID--VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 464 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~--~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 464 (488)
..|..++..|++++|++.|+++++ .+|. +..++.++|.++..+|++++|+..++++++++|+++.+++.+|.++..+
T Consensus 110 ~la~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 188 (252)
T 2ho1_A 110 NYGGFLYEQKRYEEAYQRLLEASQDTLYPE-RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKE 188 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTCTTCTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhCccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHc
Confidence 455555555555555555555555 4454 4555555555555555555555555555555555555555555555555
Q ss_pred CCHHHHHHHHHHHHcccc
Q 011353 465 GKENEAQAALREASILEN 482 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld~ 482 (488)
|++++|+..|+++++++|
T Consensus 189 g~~~~A~~~~~~~~~~~~ 206 (252)
T 2ho1_A 189 REYVPARQYYDLFAQGGG 206 (252)
T ss_dssp TCHHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 555555555555555544
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.21 E-value=9.7e-11 Score=117.14 Aligned_cols=104 Identities=14% Similarity=0.186 Sum_probs=98.6
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 459 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (488)
.....+...|..+++.|+|++|+..|+++++.+|+ +..+++.+|.+|..+|++++|+..|+++++++|+++.+++.+|.
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 102 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGH 102 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 34455668899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHcccccc
Q 011353 460 ALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+|..+|++++|++.|+++++++|..
T Consensus 103 ~~~~~g~~~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 103 LLLKQGKLDEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSCCCH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999864
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.2e-10 Score=88.44 Aligned_cols=82 Identities=17% Similarity=0.179 Sum_probs=76.5
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
..+...|..++..|+|++|+..|+++++++|+ +..++.++|.++..+|++++|+..++++++++|+++.++.++|.++.
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34557899999999999999999999999999 99999999999999999999999999999999999999999999988
Q ss_pred HCC
Q 011353 463 ALG 465 (488)
Q Consensus 463 ~~~ 465 (488)
.+|
T Consensus 89 ~~g 91 (91)
T 1na3_A 89 KQG 91 (91)
T ss_dssp HHC
T ss_pred hcC
Confidence 764
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.20 E-value=7.8e-11 Score=105.56 Aligned_cols=99 Identities=13% Similarity=0.010 Sum_probs=81.5
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCC-CchHHHHHHHHHHHH
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISP-VWHMAAYLQAAALFA 463 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~ 463 (488)
+...|..+...|++++|+..|+++++.+|+ +..++..+|.++..+|++++|+..++++++++| ++..++..++.++..
T Consensus 116 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (225)
T 2vq2_A 116 NLNKGICSAKQGQFGLAEAYLKRSLAAQPQ-FPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKA 194 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence 347788888888888888888888888888 788888888888888888888888888888888 888888888888888
Q ss_pred CCCHHHHHHHHHHHHcccccc
Q 011353 464 LGKENEAQAALREASILENKK 484 (488)
Q Consensus 464 ~~~~~~A~~~~~~al~ld~~~ 484 (488)
.|++++|...++.+++++|+.
T Consensus 195 ~~~~~~a~~~~~~~~~~~p~~ 215 (225)
T 2vq2_A 195 LGNAQAAYEYEAQLQANFPYS 215 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC
T ss_pred cCcHHHHHHHHHHHHHhCCCC
Confidence 888888888888888777754
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.6e-11 Score=116.99 Aligned_cols=134 Identities=11% Similarity=-0.024 Sum_probs=76.2
Q ss_pred HHHHHHHhcCCCccchhhhhhhhhhhhhhHhhh---------------------hHHHhhhHHHhhcCHHHHHHHHHHHH
Q 011353 351 IHEILEKLGYKDDEGAATELSFQMWTGQMQETL---------------------NSKKKGDVAFRHKDFRASIECYTQFI 409 (488)
Q Consensus 351 ~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~---------------------~~~~~g~~~~~~~~~~~A~~~~~~ai 409 (488)
....+...|......+.+..+...+.+++...+ -+.++|..+++.|+|++|+..|++||
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al 257 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVL 257 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344555666555555555566665555554322 34589999999999999999999999
Q ss_pred hcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH-HHHCCCHHHHHHHHHHHHccccccc
Q 011353 410 DVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA-LFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 410 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+ ....+..++|.+.|++++..+|.+.
T Consensus 258 ~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 258 TEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp HHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------------------------------
T ss_pred HhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 99999 999999999999999999999999999999999999999999988 4556788999999999999988654
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-10 Score=116.66 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=92.3
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCH----HHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSP----TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
..|..++..|++++|+..|+++++++|+ +. .++.++|.++..+|++++|+..++++++++|+++.+|+.+|.++.
T Consensus 262 ~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 340 (450)
T 2y4t_A 262 ESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYL 340 (450)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 4499999999999999999999999999 74 489999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHcccccc
Q 011353 463 ALGKENEAQAALREASILENKK 484 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+|++++|+..|+++++++|++
T Consensus 341 ~~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 341 IEEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp HTTCHHHHHHHHHHHHTTSSSC
T ss_pred HhcCHHHHHHHHHHHHHhCcch
Confidence 9999999999999999999875
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.9e-10 Score=109.45 Aligned_cols=118 Identities=12% Similarity=0.110 Sum_probs=104.0
Q ss_pred chhhhhhhhhhhhhhHhh----hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHH
Q 011353 365 GAATELSFQMWTGQMQET----LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDA 440 (488)
Q Consensus 365 ~~~~~~a~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 440 (488)
.+....+...+...+... ..+...|..++..|++++|++.|+++++.+|+ +..++.++|.++..+|++++|+..+
T Consensus 151 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~ 229 (327)
T 3cv0_A 151 PNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAY 229 (327)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 344445555554444432 33448899999999999999999999999999 9999999999999999999999999
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 441 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
+++++++|+++.+++.+|.++..+|++++|++.|+++++++|+
T Consensus 230 ~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 230 NRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999887
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.3e-11 Score=114.05 Aligned_cols=102 Identities=15% Similarity=0.070 Sum_probs=92.6
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcC---------CCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVG---------TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA 453 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~---------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a 453 (488)
..+...|..++..|++++|+..|++++++. |. ...++.++|.+|..+|++++|+..++++++++|+++.+
T Consensus 194 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 272 (330)
T 3hym_B 194 FVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAST 272 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHH
Confidence 334588999999999999999999999986 55 67899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 454 AYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 454 ~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
++.+|.++..+|++++|++.|+++++++|++.
T Consensus 273 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 304 (330)
T 3hym_B 273 YSAIGYIHSLMGNFENAVDYFHTALGLRRDDT 304 (330)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHccCCCch
Confidence 99999999999999999999999999998653
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.19 E-value=5.3e-11 Score=97.27 Aligned_cols=70 Identities=14% Similarity=-0.047 Sum_probs=66.4
Q ss_pred CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 416 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.+.++.++|.++++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+++|++|++++|+..
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 4678899999999999999999999999999999999999999999999999999999999999998653
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=8.1e-11 Score=96.06 Aligned_cols=111 Identities=9% Similarity=0.060 Sum_probs=89.6
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHh----hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQE----TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS 430 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~ 430 (488)
+..+|......+..+.+...+.+++.. ...+...|..++..|++++|+..|+++++++|+ +..+++++|.++..+
T Consensus 19 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~ 97 (133)
T 2lni_A 19 VKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAM 97 (133)
T ss_dssp HHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHH
Confidence 333443333333344444444444433 334458999999999999999999999999999 999999999999999
Q ss_pred CChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCC
Q 011353 431 DMPQEALNDASQAQVISPVWHMAAYLQAAALFALGK 466 (488)
Q Consensus 431 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 466 (488)
|++++|+..++++++++|++..+++.+|.++..+|+
T Consensus 98 ~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 98 KDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp TCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999988764
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.17 E-value=6.6e-11 Score=121.17 Aligned_cols=102 Identities=22% Similarity=0.277 Sum_probs=92.6
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..+..+|..+++.|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|++.|+++++++|+++.+++.+|.+
T Consensus 24 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~ 102 (537)
T 3fp2_A 24 YAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASA 102 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence 4567779999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHcccccc
Q 011353 461 LFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+..+|++++|+..|+ ++.++|+.
T Consensus 103 ~~~~g~~~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 103 NESLGNFTDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHTCHHHHHHHHH-HHC-----
T ss_pred HHHcCCHHHHHHHHH-HHhcCCCC
Confidence 999999999999995 88887754
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-10 Score=94.85 Aligned_cols=111 Identities=12% Similarity=0.019 Sum_probs=93.1
Q ss_pred HHHHHhcCCCccchhhhhhhhhhhhhhHhhhh----HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHH
Q 011353 353 EILEKLGYKDDEGAATELSFQMWTGQMQETLN----SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYL 428 (488)
Q Consensus 353 ~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~ 428 (488)
+.+...|......+....+...+.+++...+. +..+|..+++.|+|++|+..|+++++++|+ +..+|+++|.++.
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~ 83 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHH
Confidence 34445554444555666777777776665443 448999999999999999999999999999 9999999999999
Q ss_pred hcCChHHHHHHHHHhHhhC------CCchHHHHHHHHHHHHC
Q 011353 429 MSDMPQEALNDASQAQVIS------PVWHMAAYLQAAALFAL 464 (488)
Q Consensus 429 ~~~~~~~A~~~~~~al~l~------p~~~~a~~~~g~~~~~~ 464 (488)
.+|++++|+..|+++++++ |++..++..++.+...+
T Consensus 84 ~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 84 AVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999999999999 99999999998887654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.17 E-value=6.1e-11 Score=119.37 Aligned_cols=123 Identities=11% Similarity=0.097 Sum_probs=101.6
Q ss_pred HHHHHHHHhcCCCccchhhhhhhhhhhhhhHhhhh-------------------HHHhhhHHHhhcCHHHHHHHHHHHHh
Q 011353 350 AIHEILEKLGYKDDEGAATELSFQMWTGQMQETLN-------------------SKKKGDVAFRHKDFRASIECYTQFID 410 (488)
Q Consensus 350 ~~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~-------------------~~~~g~~~~~~~~~~~A~~~~~~ai~ 410 (488)
.....+..+|......+.+..+...+.+++...+. +.++|..+++.|+|++|+..|++||+
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 34445556665555566677777777776665433 33899999999999999999999999
Q ss_pred cCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHH
Q 011353 411 VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAA 473 (488)
Q Consensus 411 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~ 473 (488)
++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..+|.++..++++++|.+.
T Consensus 346 ~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 346 LDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 9999999999999999999999999999999999999999999999999999988754
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.16 E-value=3e-11 Score=100.83 Aligned_cols=82 Identities=6% Similarity=-0.059 Sum_probs=75.6
Q ss_pred HHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 403 ECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 403 ~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
..|++++.++|+ +...++.+|.++...|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+.+|++|++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 568899999999 9999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccc
Q 011353 483 KKS 485 (488)
Q Consensus 483 ~~~ 485 (488)
++.
T Consensus 84 ~~~ 86 (142)
T 2xcb_A 84 NEP 86 (142)
T ss_dssp TCT
T ss_pred CCc
Confidence 753
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.15 E-value=7.6e-11 Score=100.62 Aligned_cols=117 Identities=11% Similarity=0.011 Sum_probs=94.1
Q ss_pred HHHHHHHhcCCCccchhhhhhhhhhhhhhHh------------------h----hhHHHhhhHHHhhcCHHHHHHHHHHH
Q 011353 351 IHEILEKLGYKDDEGAATELSFQMWTGQMQE------------------T----LNSKKKGDVAFRHKDFRASIECYTQF 408 (488)
Q Consensus 351 ~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~------------------~----~~~~~~g~~~~~~~~~~~A~~~~~~a 408 (488)
....+...|......+.+..++..+..++.. . .-+.++|..+++.|+|++|+..|++|
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3455555665555555666666666666654 1 23348999999999999999999999
Q ss_pred HhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCch-HHHHHHHHHHHHCCCHH
Q 011353 409 IDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH-MAAYLQAAALFALGKEN 468 (488)
Q Consensus 409 i~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-~a~~~~g~~~~~~~~~~ 468 (488)
|+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|+++ .+...++.+...++++.
T Consensus 90 l~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 90 LKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp HHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999999999999999999999999999999998 66777777776655443
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=2.7e-10 Score=108.44 Aligned_cols=96 Identities=15% Similarity=0.023 Sum_probs=65.1
Q ss_pred HHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCC
Q 011353 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG 465 (488)
Q Consensus 386 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 465 (488)
...|..+...|++++|+..|+++++++|+ +...+..+|.+|..+|++++|+..++++++++|+++.+++.+|.++..+|
T Consensus 129 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~ 207 (330)
T 3hym_B 129 IAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNG 207 (330)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcc
Confidence 36666666666666666666666666666 66666666666666666666666666666666666666666666666666
Q ss_pred CHHHHHHHHHHHHcccc
Q 011353 466 KENEAQAALREASILEN 482 (488)
Q Consensus 466 ~~~~A~~~~~~al~ld~ 482 (488)
++++|+..|++++++.+
T Consensus 208 ~~~~A~~~~~~a~~~~~ 224 (330)
T 3hym_B 208 EWKTAEKWFLDALEKIK 224 (330)
T ss_dssp CHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhh
Confidence 66666666666666644
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.9e-10 Score=108.48 Aligned_cols=118 Identities=10% Similarity=-0.029 Sum_probs=95.1
Q ss_pred hhhhhhhhhhhhhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHH--HHHHhcCChHHHHHHHHHh
Q 011353 366 AATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRS--LSYLMSDMPQEALNDASQA 443 (488)
Q Consensus 366 ~~~~~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~a 443 (488)
+..+.++..+.+ .....-...+|..+.+.|++++|++.|+++++.+|+ ........+ ..+...|++++|+..|+++
T Consensus 115 g~~~~Al~~l~~-~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~ 192 (291)
T 3mkr_A 115 QNPDAALRTLHQ-GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEM 192 (291)
T ss_dssp TCHHHHHHHHTT-CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 334444444433 223344558899999999999999999999999999 654433333 3344569999999999999
Q ss_pred HhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 444 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 444 l~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
++.+|+++.+++++|.++..+|++++|++.|++|++++|++.
T Consensus 193 l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~ 234 (291)
T 3mkr_A 193 ADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHP 234 (291)
T ss_dssp HHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999999754
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.15 E-value=2.9e-10 Score=108.13 Aligned_cols=103 Identities=13% Similarity=0.077 Sum_probs=97.8
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
...+..+|..++..|++++|+..|+++++.+|+ +..++..+|.++..+|++++|+..++++++++|+++.+++.+|.++
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 99 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSH 99 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHH
Confidence 345668899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHccccccc
Q 011353 462 FALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
..+|++++|++.|+++++++|...
T Consensus 100 ~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 100 TNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred HHcCCHHHHHHHHHHHHHhCCccH
Confidence 999999999999999999988653
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.2e-10 Score=99.51 Aligned_cols=112 Identities=9% Similarity=-0.053 Sum_probs=93.8
Q ss_pred HHHHHHHhcCCCccchhhhhhhhhhhhhhHhhhh----HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHH
Q 011353 351 IHEILEKLGYKDDEGAATELSFQMWTGQMQETLN----SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS 426 (488)
Q Consensus 351 ~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~ 426 (488)
..+.+..+|......+.++.++..+.+++...+. +..+|..++..|+|++|+..|+++++++|+ +..+|+++|.+
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~ 88 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHH
Confidence 3445555665555556667777777776665443 449999999999999999999999999999 99999999999
Q ss_pred HHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH
Q 011353 427 YLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 463 (488)
Q Consensus 427 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (488)
|..+|++++|+..|+++++++|++..+|+++|.+...
T Consensus 89 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 89 RFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999988876543
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.13 E-value=3.6e-11 Score=100.63 Aligned_cols=108 Identities=6% Similarity=-0.064 Sum_probs=90.7
Q ss_pred HHHHHHhcCCCccchhhhhhhhhhhhhhHhhhh----------------HHHhhhHHHhhcCHHHHHHHHHHHHhc----
Q 011353 352 HEILEKLGYKDDEGAATELSFQMWTGQMQETLN----------------SKKKGDVAFRHKDFRASIECYTQFIDV---- 411 (488)
Q Consensus 352 ~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~----------------~~~~g~~~~~~~~~~~A~~~~~~ai~~---- 411 (488)
...+...|......+.++.++..+.+++...++ +.++|..+.+.|+|++|+..|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 344555566556666778888888887777665 349999999999999999999999999
Q ss_pred ---CCCCCHHHH----hhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 412 ---GTMVSPTAF----ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 412 ---~p~~~~~~~----~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
+|+ +..+| +++|.++..+|++++|+.+|++|++++|++....-.+..+
T Consensus 91 ~e~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~ 145 (159)
T 2hr2_A 91 GELNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERM 145 (159)
T ss_dssp CCTTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHH
T ss_pred ccCCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 999 99999 9999999999999999999999999999987665555444
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.12 E-value=3e-10 Score=92.06 Aligned_cols=115 Identities=12% Similarity=0.083 Sum_probs=93.8
Q ss_pred HHHHHHhcCCCccchhhhhhhhhhhhhhHhh----hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHH
Q 011353 352 HEILEKLGYKDDEGAATELSFQMWTGQMQET----LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSY 427 (488)
Q Consensus 352 ~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~ 427 (488)
...+..+|......+....+...+.+.+... ..+...|..++..|++++|++.|+++++++|+ +..++.++|.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~ 90 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLAL 90 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHH
Confidence 3344444443333444555555555554433 33448899999999999999999999999999 999999999999
Q ss_pred HhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCH
Q 011353 428 LMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKE 467 (488)
Q Consensus 428 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~ 467 (488)
..+|++++|+..++++++++|+++.+++.+|.++..+|++
T Consensus 91 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 91 SSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999886
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.12 E-value=3.1e-10 Score=116.14 Aligned_cols=128 Identities=12% Similarity=0.083 Sum_probs=108.0
Q ss_pred HHhcCCCccchhhhhhhhhhhhhhHhh----hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcC
Q 011353 356 EKLGYKDDEGAATELSFQMWTGQMQET----LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD 431 (488)
Q Consensus 356 ~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~ 431 (488)
..+|......+....+...+...+... ..+...|..+...|++++|+..|+++++++|+ +..++.++|.++..+|
T Consensus 280 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g 358 (537)
T 3fp2_A 280 IFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQG 358 (537)
T ss_dssp HHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcC
Confidence 334433344444555555555554433 33458999999999999999999999999999 8999999999999999
Q ss_pred ChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 432 MPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 432 ~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
++++|+..++++++++|+++.+++.+|.++..+|++++|++.|+++++++|..
T Consensus 359 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 411 (537)
T 3fp2_A 359 KFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQ 411 (537)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999998754
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.11 E-value=2.1e-10 Score=101.42 Aligned_cols=129 Identities=8% Similarity=0.012 Sum_probs=99.6
Q ss_pred HHHHHHHhcCCCccchhhhhhhhhhhhhhHh--------------------hhhHHHhhhHHHhhcCHHHHHHHHHHHHh
Q 011353 351 IHEILEKLGYKDDEGAATELSFQMWTGQMQE--------------------TLNSKKKGDVAFRHKDFRASIECYTQFID 410 (488)
Q Consensus 351 ~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~--------------------~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 410 (488)
....+..+|......+.+..+...+.+++.. ...+..+|..++..|+|++|+..|+++++
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4445555665444455566666666655542 13445899999999999999999999999
Q ss_pred cCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHH-HHHHHHHcc
Q 011353 411 VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQ-AALREASIL 480 (488)
Q Consensus 411 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~-~~~~~al~l 480 (488)
++|+ +..+++++|.+|..+|++++|+..|+++++++|++..++..++.++..++++.++. ..|.+.+..
T Consensus 117 ~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~ 186 (198)
T 2fbn_A 117 IDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFDK 186 (198)
T ss_dssp HSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC------------
T ss_pred hCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999 99999999999999999999999999999999999999999999999999999988 556655544
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.9e-09 Score=101.53 Aligned_cols=115 Identities=7% Similarity=-0.024 Sum_probs=101.5
Q ss_pred hhhhhhhhhhHhhhhH----HHhhhHHHhhc--CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHH----Hhc---CChHHH
Q 011353 370 LSFQMWTGQMQETLNS----KKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPTAFARRSLSY----LMS---DMPQEA 436 (488)
Q Consensus 370 ~a~~~~~~~~~~~~~~----~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~----~~~---~~~~~A 436 (488)
.++......+...++. ..||..+...+ ++++|++.++++|..+|+ +..+|+.|+.++ ..+ ++++++
T Consensus 51 ~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~E 129 (306)
T 3dra_A 51 RALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYRE 129 (306)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHH
T ss_pred HHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHH
Confidence 3455555555544443 48999999998 999999999999999999 999999999999 777 899999
Q ss_pred HHHHHHhHhhCCCchHHHHHHHHHHHHCCCHH--HHHHHHHHHHccccccc
Q 011353 437 LNDASQAQVISPVWHMAAYLQAAALFALGKEN--EAQAALREASILENKKS 485 (488)
Q Consensus 437 ~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~--~A~~~~~~al~ld~~~~ 485 (488)
++.++++++++|++..+|+.++.++..+|+++ ++++.++++++.||.+.
T Consensus 130 L~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~ 180 (306)
T 3dra_A 130 FDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN 180 (306)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999 99999999999998763
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.09 E-value=3.7e-10 Score=110.22 Aligned_cols=122 Identities=16% Similarity=0.181 Sum_probs=102.1
Q ss_pred HHHHHHHhcCCCccchhhhhhhhhhhhhhHh--------------------hhhHHHhhhHHHhhcCHHHHHHHHHHHHh
Q 011353 351 IHEILEKLGYKDDEGAATELSFQMWTGQMQE--------------------TLNSKKKGDVAFRHKDFRASIECYTQFID 410 (488)
Q Consensus 351 ~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~--------------------~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 410 (488)
....+..+|......+.++.+...+.+++.. ...+.++|..+++.|+|++|++.|++||+
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 3444555665544555566666666665541 23334899999999999999999999999
Q ss_pred cCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHH
Q 011353 411 VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAA 473 (488)
Q Consensus 411 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~ 473 (488)
++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.++..++++++|.+.
T Consensus 302 ~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 302 IDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp TCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 9999999999999999999999999999999999999999999999999999988764
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.5e-10 Score=105.99 Aligned_cols=100 Identities=10% Similarity=0.043 Sum_probs=91.8
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhc--------CCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhh--------
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI-------- 446 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l-------- 446 (488)
..+...|..++..|++++|++.|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 86 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 164 (283)
T 3edt_B 86 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPD 164 (283)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 34448999999999999999999999988 466 7889999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 447 SPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 447 ~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
.|....+++++|.+|..+|++++|+..|++++++.++
T Consensus 165 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 165 DPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999998543
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.08 E-value=3.1e-11 Score=114.71 Aligned_cols=183 Identities=13% Similarity=0.093 Sum_probs=122.2
Q ss_pred cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCC--cccEEEEEeeCC---eeEEEEecC
Q 011353 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRR--LANLLGCCCEGD---ERLLVAEYM 135 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lv~E~~ 135 (488)
+..++.|..+.||+.. ..+++|+.... .....+.+|+.+|+.+ .+.. +++++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4456889999998863 46889986532 2345788999999988 4433 456665544333 358999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK----------------------------------------- 174 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~----------------------------------------- 174 (488)
+|.+|.+... ..++...+..++.+++..|..||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988875432 2367777778888888888888751
Q ss_pred ----------------CCcccccccCcceeeCC--CCCeeeecCCCccccCCCCccccCCCC---CCcccccc-----CC
Q 011353 175 ----------------ERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGRSYSTNLAF---TPPEYLRT-----GR 228 (488)
Q Consensus 175 ----------------~~iiH~Dlkp~Nill~~--~~~~kl~DfGla~~~~~~~~~~~~~~y---~aPE~~~~-----~~ 228 (488)
..++|+|++|.||+++. ...+.|+||+.+..............+ ..|+.... +.
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 14799999999999987 456889999988764332111111111 23332211 01
Q ss_pred C---------CCCccchhhHHHHHHHHhCCCCCCc
Q 011353 229 V---------TPESVMYSFGTLLLDLLSGKHIPPS 254 (488)
Q Consensus 229 ~---------~~~~Dv~slG~~l~el~tg~~p~~~ 254 (488)
. ..-.+.|++|.++|.+.+|..++..
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 1 1125789999999999999865443
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.06 E-value=3.3e-10 Score=107.65 Aligned_cols=100 Identities=13% Similarity=0.038 Sum_probs=88.0
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC-----CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc------h
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------H 451 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~ 451 (488)
..+...|..+.. |+|++|++.|++|+++.|.. ...++.++|.+|..+|+|++|+..|++++++.|+. .
T Consensus 117 ~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (307)
T 2ifu_A 117 MALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCY 195 (307)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHH
Confidence 445588888888 99999999999999998752 15789999999999999999999999999997654 3
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+++++|.++..+|++++|+..|++++ ++|..
T Consensus 196 ~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 196 KKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 588899999999999999999999999 98854
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.05 E-value=7.3e-10 Score=87.39 Aligned_cols=69 Identities=16% Similarity=0.076 Sum_probs=66.3
Q ss_pred CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 416 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+...+.++|.++...|++++|++.|++|++++|+++.+++++|.+|..+|++++|+++|+++++++|+.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999999999999999999999999999999999999999999999999875
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.3e-10 Score=106.87 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=85.8
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhc------CCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc------h
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDV------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------H 451 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~ 451 (488)
.+...|..++..|+|++|+..|++|++. ++.....+++++|.+|..+|+|++|+..+++|+++.+.. +
T Consensus 157 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~ 236 (293)
T 3u3w_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIG 236 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 3568999999999999999999999952 211145689999999999999999999999999987654 8
Q ss_pred HHHHHHHHHHHHCC-CHHHHHHHHHHHHccc
Q 011353 452 MAAYLQAAALFALG-KENEAQAALREASILE 481 (488)
Q Consensus 452 ~a~~~~g~~~~~~~-~~~~A~~~~~~al~ld 481 (488)
.+|+++|.+|..+| ++++|+++|++|+++-
T Consensus 237 ~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 237 QLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 89999999999999 5799999999999874
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=4.6e-10 Score=105.59 Aligned_cols=92 Identities=12% Similarity=-0.032 Sum_probs=88.0
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc--hHHHHHHHHHHHHC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--HMAAYLQAAALFAL 464 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~ 464 (488)
..+..+...+++++|++.|+++++++|+ +..+++++|.+|...|++++|+..|.++++++|++ ..++.++|.++..+
T Consensus 190 ~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~ 268 (287)
T 3qou_A 190 VAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAAL 268 (287)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHc
Confidence 6667778889999999999999999999 99999999999999999999999999999999999 99999999999999
Q ss_pred CCHHHHHHHHHHHHc
Q 011353 465 GKENEAQAALREASI 479 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ 479 (488)
|+.++|+..|++++.
T Consensus 269 g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 269 GTGDALASXYRRQLY 283 (287)
T ss_dssp CTTCHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHH
Confidence 999999999999985
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.04 E-value=7.6e-10 Score=114.96 Aligned_cols=101 Identities=16% Similarity=0.130 Sum_probs=88.9
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhc------CCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHH
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDV------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 458 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (488)
+...|..+.+.|++++|++.|++++++ +|+....+|..++.+|...|++++|++.++++++++|+++.+|+.+|
T Consensus 478 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 557 (597)
T 2xpi_A 478 LNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIA 557 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 447888899999999999999999988 56522788999999999999999999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 459 AALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.+|...|++++|++.|+++++++|++.
T Consensus 558 ~~~~~~g~~~~A~~~~~~~l~~~p~~~ 584 (597)
T 2xpi_A 558 LVYLHKKIPGLAITHLHESLAISPNEI 584 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999999988753
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.03 E-value=4.8e-10 Score=97.10 Aligned_cols=83 Identities=13% Similarity=-0.011 Sum_probs=77.7
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc--hHHHHHHHHHHHHCCCHHHHHHH
Q 011353 396 KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--HMAAYLQAAALFALGKENEAQAA 473 (488)
Q Consensus 396 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~~~~~~A~~~ 473 (488)
++..+|+..|+++++++|+ +..+++++|.++..+|++++|+..|+++++++|++ +.+++++|.++..+|++++|+..
T Consensus 88 ~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~ 166 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK 166 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH
T ss_pred cccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH
Confidence 3445689999999999999 99999999999999999999999999999999987 56999999999999999999999
Q ss_pred HHHHHc
Q 011353 474 LREASI 479 (488)
Q Consensus 474 ~~~al~ 479 (488)
|+++|.
T Consensus 167 y~~al~ 172 (176)
T 2r5s_A 167 YRRQLY 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999984
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.03 E-value=7.7e-10 Score=88.71 Aligned_cols=83 Identities=6% Similarity=-0.117 Sum_probs=72.3
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
...+...|..++..|+|++|+..|+++++++|+ +..+++++|.++..+|++++|+..++++++++|+++........+.
T Consensus 27 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 27 AECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 344559999999999999999999999999999 9999999999999999999999999999999999988765444444
Q ss_pred HHCC
Q 011353 462 FALG 465 (488)
Q Consensus 462 ~~~~ 465 (488)
...+
T Consensus 106 ~~~~ 109 (117)
T 3k9i_A 106 FYAD 109 (117)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 3333
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.03 E-value=6.2e-10 Score=113.07 Aligned_cols=117 Identities=13% Similarity=0.062 Sum_probs=98.4
Q ss_pred hhhhhhhhhhhhhHhh----hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHH------HHhhHHHHHHh---cCCh
Q 011353 367 ATELSFQMWTGQMQET----LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT------AFARRSLSYLM---SDMP 433 (488)
Q Consensus 367 ~~~~a~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~~~~~~~---~~~~ 433 (488)
....+...+...+... ..+...|..++..|++++|+..|+++++++|+ +.. ++.++|.++.. +|++
T Consensus 353 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~ 431 (514)
T 2gw1_A 353 KFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENF 431 (514)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHH
T ss_pred CHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCH
Confidence 3444444444444432 23447899999999999999999999999988 543 89999999999 9999
Q ss_pred HHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 434 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 434 ~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
++|+..++++++++|+++.+++.+|.+|..+|++++|++.|+++++++|++
T Consensus 432 ~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 482 (514)
T 2gw1_A 432 IEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTM 482 (514)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSH
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999999999999999864
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.8e-10 Score=108.06 Aligned_cols=129 Identities=8% Similarity=0.005 Sum_probs=98.7
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHhhh----hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQETL----NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS 430 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~ 430 (488)
+..+|......+....+...+.+++...+ -+..+|..+++.|+|++|+..|++|++++|+ +..+++++|.+|..+
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~ 85 (281)
T 2c2l_A 7 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEM 85 (281)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHc
Confidence 33344333344456666666666665443 3448999999999999999999999999999 999999999999999
Q ss_pred CChHHHHHHHHHhHhhCCCchH-----HHHHH--H----------------------HHHHHCCCHHHHHHHHHHHHccc
Q 011353 431 DMPQEALNDASQAQVISPVWHM-----AAYLQ--A----------------------AALFALGKENEAQAALREASILE 481 (488)
Q Consensus 431 ~~~~~A~~~~~~al~l~p~~~~-----a~~~~--g----------------------~~~~~~~~~~~A~~~~~~al~ld 481 (488)
|++++|+..|++|++++|++.. ++..+ + ...+..|++++|++.|++|++++
T Consensus 86 g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~ 165 (281)
T 2c2l_A 86 ESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGH 165 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTT
T ss_pred CCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 9999999999999999997621 11111 1 01123689999999999999999
Q ss_pred ccc
Q 011353 482 NKK 484 (488)
Q Consensus 482 ~~~ 484 (488)
|.+
T Consensus 166 p~~ 168 (281)
T 2c2l_A 166 EDD 168 (281)
T ss_dssp SCH
T ss_pred cch
Confidence 864
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.02 E-value=7.6e-10 Score=83.87 Aligned_cols=74 Identities=20% Similarity=0.146 Sum_probs=67.1
Q ss_pred cCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 411 VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 411 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
++|.....+++++|.++...|++++|+..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|..
T Consensus 3 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 3 MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CcccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 34432578899999999999999999999999999999999999999999999999999999999999999865
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=7.3e-10 Score=104.48 Aligned_cols=99 Identities=11% Similarity=0.013 Sum_probs=90.2
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhc--------CCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhh---------
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI--------- 446 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l--------- 446 (488)
.+...|..++..|++++|++.|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 155 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 233 (311)
T 3nf1_A 155 QLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSV 233 (311)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3448899999999999999999999998 666 7788999999999999999999999999984
Q ss_pred ----------------------------------------CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 447 ----------------------------------------SPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 447 ----------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
+|..+.+++.+|.+|..+|++++|++.|++|+++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 234 DDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp ----CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred CcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 5777899999999999999999999999999998775
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.01 E-value=4.8e-10 Score=93.56 Aligned_cols=83 Identities=16% Similarity=-0.010 Sum_probs=68.9
Q ss_pred hhhhhhhhhhhhHhh----hhHHHhhhHHHhhcCH----------HHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcC--
Q 011353 368 TELSFQMWTGQMQET----LNSKKKGDVAFRHKDF----------RASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-- 431 (488)
Q Consensus 368 ~~~a~~~~~~~~~~~----~~~~~~g~~~~~~~~~----------~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-- 431 (488)
.+.+...+..+++.. ..+.+.|..+.+.+++ ++|+..|++||+++|+ +..+|+++|.+|..+|
T Consensus 18 feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l 96 (158)
T 1zu2_A 18 FEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFL 96 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhccc
Confidence 455555555555543 3444788888888765 5999999999999999 9999999999999885
Q ss_pred ---------ChHHHHHHHHHhHhhCCCch
Q 011353 432 ---------MPQEALNDASQAQVISPVWH 451 (488)
Q Consensus 432 ---------~~~~A~~~~~~al~l~p~~~ 451 (488)
++++|++.|++|++++|++.
T Consensus 97 ~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 97 TPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred CcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 89999999999999999985
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.7e-09 Score=111.31 Aligned_cols=115 Identities=7% Similarity=-0.084 Sum_probs=101.9
Q ss_pred hhhhhhhhhhHhhhh----HHHhhhHHHhhcC----------HHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcC--Ch
Q 011353 370 LSFQMWTGQMQETLN----SKKKGDVAFRHKD----------FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD--MP 433 (488)
Q Consensus 370 ~a~~~~~~~~~~~~~----~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~--~~ 433 (488)
.++..+..++...++ +..||..+...++ +++|++.++++|+.+|+ +..+|++|+.++..++ ++
T Consensus 47 eal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~ 125 (567)
T 1dce_A 47 SVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNW 125 (567)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCH
T ss_pred HHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccH
Confidence 344555555554443 3488899988888 99999999999999999 9999999999999999 67
Q ss_pred HHHHHHHHHhHhhCCCchHHHHHHHHHHHHCC-CHHHHHHHHHHHHccccccc
Q 011353 434 QEALNDASQAQVISPVWHMAAYLQAAALFALG-KENEAQAALREASILENKKS 485 (488)
Q Consensus 434 ~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~ld~~~~ 485 (488)
++|++.++++++++|++..||+.+|.++..+| .+++|+++++++++++|.+.
T Consensus 126 ~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~ 178 (567)
T 1dce_A 126 ARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred HHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc
Confidence 99999999999999999999999999999999 99999999999999998763
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.00 E-value=2.1e-09 Score=102.08 Aligned_cols=95 Identities=8% Similarity=-0.013 Sum_probs=46.0
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHH-HHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH-C
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPT-AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA-L 464 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~-~ 464 (488)
..|..+...|++++|.+.|+++++++|. +.. +|.+.+.++.+.|++++|+..|++|++++|....+|...+...+. +
T Consensus 104 ~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~ 182 (308)
T 2ond_A 104 AYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCS 182 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTS
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc
Confidence 4444444445555555555555555554 333 445555555555555555555555555555444444433333222 4
Q ss_pred CCHHHHHHHHHHHHcccc
Q 011353 465 GKENEAQAALREASILEN 482 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld~ 482 (488)
|++++|++.|++|++++|
T Consensus 183 ~~~~~A~~~~~~al~~~p 200 (308)
T 2ond_A 183 KDKSVAFKIFELGLKKYG 200 (308)
T ss_dssp CCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCC
Confidence 555555555555555444
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-09 Score=108.81 Aligned_cols=126 Identities=14% Similarity=0.023 Sum_probs=87.2
Q ss_pred hcCCCccchhhhhhhhhhhhhhHh-------------hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCC--------CCC
Q 011353 358 LGYKDDEGAATELSFQMWTGQMQE-------------TLNSKKKGDVAFRHKDFRASIECYTQFIDVGT--------MVS 416 (488)
Q Consensus 358 ~g~~~~~~~~~~~a~~~~~~~~~~-------------~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p--------~~~ 416 (488)
+|+.....+..+.++..+.++++. +..+.+.|..++..|+|++|+..|++++++.+ . .
T Consensus 57 Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~-~ 135 (472)
T 4g1t_A 57 LAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE-S 135 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC-C
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh-h
Confidence 343333344455555555555442 12234678888888888888888888887632 3 5
Q ss_pred HHHHhhHHHHHHhc--CChHHHHHHHHHhHhhCCCchHHHHHHHHHHH---HCCCHHHHHHHHHHHHcccccc
Q 011353 417 PTAFARRSLSYLMS--DMPQEALNDASQAQVISPVWHMAAYLQAAALF---ALGKENEAQAALREASILENKK 484 (488)
Q Consensus 417 ~~~~~~~~~~~~~~--~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~---~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+..+.+.|.++... ++|++|++.|++|++++|+++.++..+|.+++ ..+++++|++.|++|++++|+.
T Consensus 136 ~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~ 208 (472)
T 4g1t_A 136 PELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDN 208 (472)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcc
Confidence 67777777766654 46888888888888888888888888887754 4567788888888888888765
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.99 E-value=6.3e-10 Score=105.73 Aligned_cols=100 Identities=12% Similarity=-0.042 Sum_probs=88.2
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC-----CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc------h
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------H 451 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~ 451 (488)
..+.+.|..+...|+|++|+..|++|+++.+.. ...++.++|.+|.. |++++|+..|++|+++.|.. .
T Consensus 77 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~ 155 (307)
T 2ifu_A 77 KAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAA 155 (307)
T ss_dssp HHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHH
Confidence 345588999999999999999999999885431 25689999999999 99999999999999998754 6
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
.++.++|.+|..+|+|++|+..|++++++.++
T Consensus 156 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 156 ELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999998654
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=100.33 Aligned_cols=128 Identities=12% Similarity=-0.009 Sum_probs=101.6
Q ss_pred HHHHHHhcCCCccchhhhhhhhhhhhhhHh------------hhhHHHhhhHHHhhcCHHHHHHHHHHHHhc--------
Q 011353 352 HEILEKLGYKDDEGAATELSFQMWTGQMQE------------TLNSKKKGDVAFRHKDFRASIECYTQFIDV-------- 411 (488)
Q Consensus 352 ~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~------------~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-------- 411 (488)
...+..+|......+..+.+...+.+++.. ...+...|..++..|++++|++.|++++++
T Consensus 85 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 164 (283)
T 3edt_B 85 AATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPD 164 (283)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 334444453333334444444444444333 333448999999999999999999999999
Q ss_pred CCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhh---------------------------------------------
Q 011353 412 GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI--------------------------------------------- 446 (488)
Q Consensus 412 ~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l--------------------------------------------- 446 (488)
+|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 165 ~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
T 3edt_B 165 DPN-VAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKA 243 (283)
T ss_dssp CHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------C
T ss_pred CHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHh
Confidence 777 7889999999999999999999999999986
Q ss_pred ----CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcc
Q 011353 447 ----SPVWHMAAYLQAAALFALGKENEAQAALREASIL 480 (488)
Q Consensus 447 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 480 (488)
.|..+.++..+|.+|..+|++++|++.|++|+++
T Consensus 244 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 244 CKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3666789999999999999999999999999976
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-09 Score=106.76 Aligned_cols=132 Identities=12% Similarity=0.034 Sum_probs=104.7
Q ss_pred HHHHHHHhcCCCccchhhhhhhhhhhhhhHh-----------hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC----
Q 011353 351 IHEILEKLGYKDDEGAATELSFQMWTGQMQE-----------TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV---- 415 (488)
Q Consensus 351 ~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~-----------~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---- 415 (488)
....+..+|......+....+...+.+++.. +..+...|..+...|+|++|++.|++|+++.+..
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 221 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQ 221 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChH
Confidence 3455555564444444455555555444443 2334488999999999999999999999886641
Q ss_pred -CHHHHhhHHHHHHhcCChHHHHHHHHHhHh-----hC-CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 416 -SPTAFARRSLSYLMSDMPQEALNDASQAQV-----IS-PVWHMAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 416 -~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----l~-p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
...++.++|.+|..+|++++|+..+++|++ .+ |..+.+++++|.+|..+|++++|++.|++|+++.+
T Consensus 222 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 222 LMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 235899999999999999999999999999 56 88899999999999999999999999999999853
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=98.98 E-value=2e-09 Score=101.41 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=86.2
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHH---hcCCCCCH----HHHhhHHHHHHhcCChHHHHHHHHHhHhhCCC------
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFI---DVGTMVSP----TAFARRSLSYLMSDMPQEALNDASQAQVISPV------ 449 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai---~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~------ 449 (488)
..+...|..++..|+|++|+..|++|+ +..|+ +. .+++++|.+|..+|+|++|+..+++|+++.++
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~ 234 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHH
Confidence 345588999999999999999999999 44555 32 68999999999999999999999999998754
Q ss_pred chHHHHHHHHHHHHCCCHHHH-HHHHHHHHccc
Q 011353 450 WHMAAYLQAAALFALGKENEA-QAALREASILE 481 (488)
Q Consensus 450 ~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~ld 481 (488)
.+.+|+++|.+|..+|++++| ..+|++|+++.
T Consensus 235 ~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 278999999999999999999 78899999874
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.5e-09 Score=91.42 Aligned_cols=99 Identities=13% Similarity=0.115 Sum_probs=86.0
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC-----CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCC------CchH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQVISP------VWHM 452 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p------~~~~ 452 (488)
.+...|..++..|++++|++.|++++++.+.. ...++.++|.++..+|++++|+..+++++++.+ ..+.
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 130 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGR 130 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHH
Confidence 34488999999999999999999999886541 156899999999999999999999999998743 2367
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 453 AAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 453 a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
++..+|.++..+|++++|++.|++++++..
T Consensus 131 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 131 ACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999998753
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=102.89 Aligned_cols=131 Identities=12% Similarity=0.022 Sum_probs=104.0
Q ss_pred hHHHHHHHHhcCCCccchhhhhhhhhhhhhhH------------hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhc-----
Q 011353 349 TAIHEILEKLGYKDDEGAATELSFQMWTGQMQ------------ETLNSKKKGDVAFRHKDFRASIECYTQFIDV----- 411 (488)
Q Consensus 349 ~~~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~----- 411 (488)
+.....+..+|......+..+.+...+.+++. ....+...|..++..|++++|+..|++++++
T Consensus 24 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 103 (311)
T 3nf1_A 24 PARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTL 103 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 34445555555444344444444444444443 2233448999999999999999999999987
Q ss_pred ---CCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhC--------CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcc
Q 011353 412 ---GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS--------PVWHMAAYLQAAALFALGKENEAQAALREASIL 480 (488)
Q Consensus 412 ---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 480 (488)
+|. ...++.++|.+|..+|++++|+..+++++++. |....+++++|.++..+|++++|++.|++++++
T Consensus 104 ~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 104 GKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp CTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 355 67889999999999999999999999999984 777899999999999999999999999999998
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.4e-09 Score=110.22 Aligned_cols=116 Identities=9% Similarity=0.034 Sum_probs=100.5
Q ss_pred hhhhhhhhhhhHhhh----hHHHhhhHHHhhc--CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcC-ChHHHHHHHH
Q 011353 369 ELSFQMWTGQMQETL----NSKKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-MPQEALNDAS 441 (488)
Q Consensus 369 ~~a~~~~~~~~~~~~----~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~ 441 (488)
+.++..+..++...+ .+..||-.+.+.+ +|++|++.++++|++||+ +..+|++|+.++..+| .+++|+++++
T Consensus 90 ~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~ 168 (567)
T 1dce_A 90 KAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTD 168 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHH
Confidence 344444444444433 3448899998989 789999999999999999 9999999999999999 9999999999
Q ss_pred HhHhhCCCchHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHccccccc
Q 011353 442 QAQVISPVWHMAAYLQAAALFAL--------------GKENEAQAALREASILENKKS 485 (488)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~~~--------------~~~~~A~~~~~~al~ld~~~~ 485 (488)
++|+++|.+..||+.+|.++..+ +.+++|++++.+|++++|++.
T Consensus 169 ~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~ 226 (567)
T 1dce_A 169 SLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 226 (567)
T ss_dssp TTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred HHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCc
Confidence 99999999999999999999986 568999999999999999764
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=7.8e-09 Score=98.49 Aligned_cols=114 Identities=6% Similarity=-0.052 Sum_probs=100.2
Q ss_pred hhhhhhhhhHhhhhH----HHhhhHHHhhc-CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc-C-ChHHHHHHHHHh
Q 011353 371 SFQMWTGQMQETLNS----KKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS-D-MPQEALNDASQA 443 (488)
Q Consensus 371 a~~~~~~~~~~~~~~----~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-~-~~~~A~~~~~~a 443 (488)
++.....++...++. ..|+..+...+ +++++++.++++|..+|+ +..+|+.|+.++..+ + +++++++.++++
T Consensus 73 AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~ 151 (349)
T 3q7a_A 73 ALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGS 151 (349)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Confidence 444444455444433 48899998888 599999999999999999 999999999999998 8 999999999999
Q ss_pred HhhCCCchHHHHHHHHHHHHCCCHH--------HHHHHHHHHHccccccc
Q 011353 444 QVISPVWHMAAYLQAAALFALGKEN--------EAQAALREASILENKKS 485 (488)
Q Consensus 444 l~l~p~~~~a~~~~g~~~~~~~~~~--------~A~~~~~~al~ld~~~~ 485 (488)
++++|++..||+.++.++..+|.++ ++++.++++++.+|.+.
T Consensus 152 L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~ 201 (349)
T 3q7a_A 152 LLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNN 201 (349)
T ss_dssp TSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999988 99999999999998653
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-09 Score=84.69 Aligned_cols=72 Identities=13% Similarity=0.083 Sum_probs=69.3
Q ss_pred cCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 411 VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 411 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
++|+ +..+++.+|.++..+|++++|+..++++++++|+++.+++++|.++..+|++++|++.|+++++++|.
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4688 88999999999999999999999999999999999999999999999999999999999999999987
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=4e-09 Score=83.61 Aligned_cols=96 Identities=7% Similarity=0.002 Sum_probs=81.3
Q ss_pred hhhhhhhhhhhhhhHhh----hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHH
Q 011353 366 AATELSFQMWTGQMQET----LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDAS 441 (488)
Q Consensus 366 ~~~~~a~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 441 (488)
+..+.+...+...+... ..+...|..++..|++++|+..|+++++++|+ +..++.++|.++..+|++++|+..++
T Consensus 18 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~ 96 (118)
T 1elw_A 18 GNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYE 96 (118)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34444555554444433 33448899999999999999999999999999 99999999999999999999999999
Q ss_pred HhHhhCCCchHHHHHHHHHHH
Q 011353 442 QAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~ 462 (488)
++++++|+++.++..++.+..
T Consensus 97 ~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 97 EGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHhhc
Confidence 999999999999999988753
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.95 E-value=4.5e-09 Score=99.77 Aligned_cols=113 Identities=8% Similarity=-0.055 Sum_probs=95.1
Q ss_pred hhhhhhhhhhhhhHhhh-----hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHH-hcCChHHHHHHH
Q 011353 367 ATELSFQMWTGQMQETL-----NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYL-MSDMPQEALNDA 440 (488)
Q Consensus 367 ~~~~a~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~ 440 (488)
..+.+...+.+++...+ .+...|..+.+.|++++|+..|++|++++|. ...+|...+.... .+|++++|+..|
T Consensus 114 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~ 192 (308)
T 2ond_A 114 KYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIF 192 (308)
T ss_dssp CHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34445555555554322 3558888899999999999999999999999 7888876666543 379999999999
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcc
Q 011353 441 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 480 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 480 (488)
++|++++|+++.+|..+|.++..+|++++|+..|++|++.
T Consensus 193 ~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 193 ELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999995
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.94 E-value=4.7e-09 Score=84.04 Aligned_cols=99 Identities=14% Similarity=0.172 Sum_probs=83.7
Q ss_pred hhhhhhhhhhhhhhHh----hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHH
Q 011353 366 AATELSFQMWTGQMQE----TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDAS 441 (488)
Q Consensus 366 ~~~~~a~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 441 (488)
+..+.+...+.+.+.. ...+...|..++..|++++|+..|+++++.+|. +...+.++|.++..+|++++|+..++
T Consensus 23 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~ 101 (125)
T 1na0_A 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQ 101 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3344444444444433 233458899999999999999999999999999 99999999999999999999999999
Q ss_pred HhHhhCCCchHHHHHHHHHHHHCC
Q 011353 442 QAQVISPVWHMAAYLQAAALFALG 465 (488)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~~~~ 465 (488)
++++++|+++.++..+|.++..+|
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 102 KALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHhCCCcHHHHHHHHHHHHhcc
Confidence 999999999999999999987654
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=98.94 E-value=5.3e-09 Score=98.48 Aligned_cols=96 Identities=10% Similarity=-0.001 Sum_probs=84.2
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCC-----CHHHHhhHHHHHHhcCChHHHHHHHHHhH---hhCCCc----hHHH
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQ---VISPVW----HMAA 454 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al---~l~p~~----~~a~ 454 (488)
..|..+...|+|++|+..|++|+++.+.. ...+++++|.+|..+|++++|+..|++|+ +..|++ +.++
T Consensus 120 ~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~ 199 (293)
T 2qfc_A 120 YVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHH
Confidence 57777888899999999999999876541 15689999999999999999999999999 556654 3699
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 455 YLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 455 ~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
+++|.+|..+|+|++|+..|++|+++.+
T Consensus 200 ~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 200 YNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999864
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.94 E-value=4.1e-09 Score=109.39 Aligned_cols=114 Identities=7% Similarity=-0.089 Sum_probs=97.9
Q ss_pred hhhhhhhhhhhhhHh----hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHH
Q 011353 367 ATELSFQMWTGQMQE----TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 442 (488)
Q Consensus 367 ~~~~a~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 442 (488)
..+.+...+.+++.. ...+...|..+.+.|++++|++.|+++++.+|+ +..+|..++.+|...|++++|++.|++
T Consensus 388 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~ 466 (597)
T 2xpi_A 388 KISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQS 466 (597)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 344444444444432 234458899999999999999999999999999 899999999999999999999999999
Q ss_pred hHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccc
Q 011353 443 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 481 (488)
Q Consensus 443 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld 481 (488)
+++++|+++.+|+.+|.+|...|++++|++.|++++++.
T Consensus 467 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 505 (597)
T 2xpi_A 467 SYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLV 505 (597)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999884
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.93 E-value=2.6e-09 Score=86.32 Aligned_cols=67 Identities=21% Similarity=0.013 Sum_probs=63.9
Q ss_pred HHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 419 AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 419 ~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.++.+|.++...|++++|+..|++|++++|+++.+|+.+|.++..+|++++|+..|++|++++|+..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 85 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI 85 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 4778999999999999999999999999999999999999999999999999999999999999753
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.4e-09 Score=104.81 Aligned_cols=133 Identities=11% Similarity=-0.010 Sum_probs=103.7
Q ss_pred HHHHHHHHhcCCCccchhhhhhhhhhhhhhH-----------hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCC----
Q 011353 350 AIHEILEKLGYKDDEGAATELSFQMWTGQMQ-----------ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM---- 414 (488)
Q Consensus 350 ~~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~-----------~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---- 414 (488)
.....+..+|......+....+...+.+++. .+..+...|..+...|+|++|++.|++|+++.+.
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 218 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQND 218 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCH
Confidence 3344555555443333444444444444333 2333448999999999999999999999987432
Q ss_pred -CCHHHHhhHHHHHHhcCChHHHHHHHHHhHh-----hCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 415 -VSPTAFARRSLSYLMSDMPQEALNDASQAQV-----ISPVWHMAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 415 -~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
....++.++|.+|..+|++++|+..+++|++ .+|..+.+++++|.+|..+|++++|+..|++|+++.+
T Consensus 219 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 219 RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 1356899999999999999999999999999 8898899999999999999999999999999999854
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=98.92 E-value=7.6e-09 Score=97.44 Aligned_cols=93 Identities=6% Similarity=-0.125 Sum_probs=86.0
Q ss_pred HHhhcCH-HHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcC--ChHHHHHHHHHhHhhCCCchHHHHHHHHHH----HHC
Q 011353 392 AFRHKDF-RASIECYTQFIDVGTMVSPTAFARRSLSYLMSD--MPQEALNDASQAQVISPVWHMAAYLQAAAL----FAL 464 (488)
Q Consensus 392 ~~~~~~~-~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~l~p~~~~a~~~~g~~~----~~~ 464 (488)
..+.+++ ++|++.++++|.++|+ +..+|+.|+.++..++ ++++|++.++++|.++|++..+|+.++.++ ..+
T Consensus 42 ~~~~~e~s~~aL~~t~~~L~~nP~-~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l 120 (306)
T 3dra_A 42 LMKAEEYSERALHITELGINELAS-HYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELN 120 (306)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCCHHHHHHHHHHHHHCcH-HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhc
Confidence 3444555 6999999999999999 9999999999999999 999999999999999999999999999999 778
Q ss_pred ---CCHHHHHHHHHHHHccccccc
Q 011353 465 ---GKENEAQAALREASILENKKS 485 (488)
Q Consensus 465 ---~~~~~A~~~~~~al~ld~~~~ 485 (488)
++++++++.+.++++.+|++.
T Consensus 121 ~~~~~~~~EL~~~~~~l~~~pkny 144 (306)
T 3dra_A 121 NNDFDPYREFDILEAMLSSDPKNH 144 (306)
T ss_dssp TTCCCTHHHHHHHHHHHHHCTTCH
T ss_pred cccCCHHHHHHHHHHHHHhCCCCH
Confidence 899999999999999999864
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.91 E-value=5.2e-09 Score=105.30 Aligned_cols=99 Identities=10% Similarity=0.017 Sum_probs=86.7
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc-------------------CChHHHHHHHHHhH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS-------------------DMPQEALNDASQAQ 444 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-------------------~~~~~A~~~~~~al 444 (488)
.+...|..+...|++++|++.|++|++.+|+ +..++.++|.+|..+ +.+++|+..+++++
T Consensus 249 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 327 (472)
T 4g1t_A 249 VLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKAD 327 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 3448899999999999999999999999999 999999999888653 34678888999999
Q ss_pred hhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 445 VISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 445 ~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
+++|+++.+++.+|.+|..+|++++|++.|++|++++++
T Consensus 328 ~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~ 366 (472)
T 4g1t_A 328 EANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELT 366 (472)
T ss_dssp HHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC
T ss_pred hcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999988764
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.90 E-value=7.1e-09 Score=86.09 Aligned_cols=108 Identities=12% Similarity=0.044 Sum_probs=86.0
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHh-------hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHH
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQE-------TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSY 427 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~-------~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~ 427 (488)
+..+|......+....+...+.+.+.. ...+...|..++..|+|++|+..|+++++++|+ +..+++++|.++
T Consensus 31 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~ 109 (148)
T 2dba_A 31 LRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQAL 109 (148)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHH
Confidence 334443333334445555555544443 333458999999999999999999999999999 899999999999
Q ss_pred HhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH
Q 011353 428 LMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 463 (488)
Q Consensus 428 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (488)
..+|++++|+..++++++++|++..++..++.+...
T Consensus 110 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 110 EKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 999999999999999999999999999888877543
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.90 E-value=8.1e-09 Score=78.80 Aligned_cols=71 Identities=17% Similarity=0.027 Sum_probs=66.2
Q ss_pred CCCCCHHHHhhHHHHHHhcCC---hHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 412 GTMVSPTAFARRSLSYLMSDM---PQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 412 ~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
+|+ ++.++..+|.++...++ .++|...+++|++++|+++.+++.+|..++..|+|++|+..|+++++.+|.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 678 89999999999976665 799999999999999999999999999999999999999999999999986
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.4e-09 Score=81.89 Aligned_cols=66 Identities=20% Similarity=0.117 Sum_probs=62.4
Q ss_pred HhhHHHHHHhcCChHHHHHHHHHhHhhCCCchH-HHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 420 FARRSLSYLMSDMPQEALNDASQAQVISPVWHM-AAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 420 ~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.+++|.++...|++++|++.|+++++++|+++. +++++|.+|..+|++++|++.|+++++++|+..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 357899999999999999999999999999999 999999999999999999999999999998754
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.89 E-value=6.1e-09 Score=102.70 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=93.3
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCH----HHHhhHHHHHHhcCChHHHHHHHHHhHhh------CCC
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----TAFARRSLSYLMSDMPQEALNDASQAQVI------SPV 449 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~ 449 (488)
..+..+...|..++..|+|++|+..|+++++++|+ +. .++.++|.+|..+|++++|+..+++++++ +|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 34455668999999999999999999999999999 65 58999999999999999999999999999 688
Q ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHccc
Q 011353 450 WHMAAYLQAAALFALGKENEAQAALREASILE 481 (488)
Q Consensus 450 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld 481 (488)
.+.+++.+|.+|..+|++++|+..|++++++.
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999884
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.89 E-value=4e-09 Score=88.68 Aligned_cols=100 Identities=10% Similarity=0.070 Sum_probs=88.1
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC-----HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc------
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS-----PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------ 450 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------ 450 (488)
+..+...|..++..|++++|+..|++++++.+... ..++.++|.++..+|++++|+..+++++++.+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 34556889999999999999999999998866411 2589999999999999999999999999987654
Q ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHccc
Q 011353 451 HMAAYLQAAALFALGKENEAQAALREASILE 481 (488)
Q Consensus 451 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld 481 (488)
..+++++|.++..+|++++|++.|++++++.
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999874
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.9e-09 Score=98.49 Aligned_cols=101 Identities=17% Similarity=0.163 Sum_probs=92.5
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC----HHHHhhHHHHHHhcCChHHHHHHHHHhHhh------CCCch
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS----PTAFARRSLSYLMSDMPQEALNDASQAQVI------SPVWH 451 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~~~ 451 (488)
...+...|..++..|+|++|+..|+++++++|+ + ..++..+|.++...|++++|+..+++++++ .|..+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 345668899999999999999999999999999 6 478999999999999999999999999988 66678
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
.+++.+|.++..+|++++|+..|++++++.++
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998653
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.7e-08 Score=93.66 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=94.6
Q ss_pred hhhhhhhhhhhhhH--hhhhHHHhhhHHHh----hcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh----cCChHHH
Q 011353 367 ATELSFQMWTGQMQ--ETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEA 436 (488)
Q Consensus 367 ~~~~a~~~~~~~~~--~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A 436 (488)
..+.+...+.++.+ ........|..+.. .+++++|+..|++|++++ +..+++++|.+|.. .+++++|
T Consensus 21 ~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A 97 (273)
T 1ouv_A 21 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKA 97 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHH
Confidence 44455555544443 23345588999999 999999999999999985 68899999999999 9999999
Q ss_pred HHHHHHhHhhCCCchHHHHHHHHHHHH----CCCHHHHHHHHHHHHcccc
Q 011353 437 LNDASQAQVISPVWHMAAYLQAAALFA----LGKENEAQAALREASILEN 482 (488)
Q Consensus 437 ~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~~~~~~al~ld~ 482 (488)
+..|++|++++ ++.+++++|.+|.. .+++++|++.|++|+++++
T Consensus 98 ~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 98 LQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 99999999984 89999999999999 9999999999999999875
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=98.88 E-value=3.2e-09 Score=87.25 Aligned_cols=111 Identities=9% Similarity=-0.037 Sum_probs=87.4
Q ss_pred HHHhcCCCccchhhhhhhhhhhhhhHhhh----hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc
Q 011353 355 LEKLGYKDDEGAATELSFQMWTGQMQETL----NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS 430 (488)
Q Consensus 355 l~~~g~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~ 430 (488)
+..+|......+..+.+...+..++...+ -+...|..++..|+|++|+..|+++++++|+ +..+++++|.++..+
T Consensus 12 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~ 90 (137)
T 3q49_B 12 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEM 90 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHH
Confidence 34444333344455666666666555443 3458999999999999999999999999999 999999999999999
Q ss_pred CChHHHHHHHHHhHhhCCC-----chHHHHHHHHHHHHCCC
Q 011353 431 DMPQEALNDASQAQVISPV-----WHMAAYLQAAALFALGK 466 (488)
Q Consensus 431 ~~~~~A~~~~~~al~l~p~-----~~~a~~~~g~~~~~~~~ 466 (488)
|++++|+..|+++++++|+ +..+...+..+....+.
T Consensus 91 ~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 131 (137)
T 3q49_B 91 ESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWN 131 (137)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 66777666666555443
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.8e-08 Score=93.61 Aligned_cols=111 Identities=11% Similarity=0.060 Sum_probs=93.7
Q ss_pred hhhhhhhhhhhhhHh--hhhHHHhhhHHHh----hcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh----cCChHHH
Q 011353 367 ATELSFQMWTGQMQE--TLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEA 436 (488)
Q Consensus 367 ~~~~a~~~~~~~~~~--~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A 436 (488)
..+.++..+.++.+. .......|..+.. .+++++|+..|++|++++ +..+++++|.+|.. .+++++|
T Consensus 57 ~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A 133 (273)
T 1ouv_A 57 NLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKA 133 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHcCCCcccCHHHH
Confidence 344444444444332 3444588999999 999999999999999983 78999999999999 9999999
Q ss_pred HHHHHHhHhhCCCchHHHHHHHHHHHH----CCCHHHHHHHHHHHHcccc
Q 011353 437 LNDASQAQVISPVWHMAAYLQAAALFA----LGKENEAQAALREASILEN 482 (488)
Q Consensus 437 ~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~~~~~~al~ld~ 482 (488)
+..|++|++++ ++.+++++|.+|.. .+++++|+..|++|+++++
T Consensus 134 ~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 181 (273)
T 1ouv_A 134 VEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 181 (273)
T ss_dssp HHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 99999999986 68899999999999 9999999999999998864
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=98.87 E-value=3.6e-09 Score=99.65 Aligned_cols=97 Identities=10% Similarity=0.016 Sum_probs=83.9
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCC-C----HHHHhhHHHHHHhcCChHHHHHHHHHhHh-------hCCCchHHH
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMV-S----PTAFARRSLSYLMSDMPQEALNDASQAQV-------ISPVWHMAA 454 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~-------l~p~~~~a~ 454 (488)
..|..++..+++++|+..|++|+++.+.. + ..+++++|.+|..+|++++|+..|++|++ ..+..+.++
T Consensus 120 ~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 199 (293)
T 3u3w_A 120 YVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHH
Confidence 47888888899999999999999975541 1 34799999999999999999999999995 234446799
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 455 YLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 455 ~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
+++|.+|..+|+|++|++.|++|+++.++
T Consensus 200 ~nlg~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 200 YNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998754
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.87 E-value=3.6e-09 Score=97.57 Aligned_cols=100 Identities=15% Similarity=-0.015 Sum_probs=88.5
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcC-CCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhC--CC-chHHHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVG-TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS--PV-WHMAAYLQAA 459 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--p~-~~~a~~~~g~ 459 (488)
....+|..+++.++|++|+..|++++... |.....+++++|.++..+|++++|+..|++++.-. |. .+++++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 44588999999999999999999888764 22124689999999999999999999999998655 66 6789999999
Q ss_pred HHHHCCCHHHHHHHHHHHHccccc
Q 011353 460 ALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
++..+|+.++|...|++++..+|+
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999986
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.86 E-value=7.7e-09 Score=101.38 Aligned_cols=101 Identities=17% Similarity=0.163 Sum_probs=92.4
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC----HHHHhhHHHHHHhcCChHHHHHHHHHhHhh------CCCch
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS----PTAFARRSLSYLMSDMPQEALNDASQAQVI------SPVWH 451 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~~~ 451 (488)
+..+..+|..++..|+|++|+..|+++++++|. + ..++..+|.+|..+|++++|+..+++|+++ .|..+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 345568899999999999999999999999998 6 468999999999999999999999999988 56678
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
.+++.+|.+|..+|++++|+..|++++++.++
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 119 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 119 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999998764
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=98.86 E-value=7.8e-09 Score=80.25 Aligned_cols=80 Identities=8% Similarity=0.058 Sum_probs=68.4
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHH--HHHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA--AYLQAAAL 461 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a--~~~~g~~~ 461 (488)
.+...|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|++.|++++++.|+..+. ...+..++
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~l 87 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDAK 87 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHHH
Confidence 4558899999999999999999999999999 99999999999999999999999999999998765443 33444444
Q ss_pred HHC
Q 011353 462 FAL 464 (488)
Q Consensus 462 ~~~ 464 (488)
...
T Consensus 88 ~~~ 90 (100)
T 3ma5_A 88 LKA 90 (100)
T ss_dssp HHH
T ss_pred HHc
Confidence 443
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=1.7e-08 Score=95.76 Aligned_cols=100 Identities=10% Similarity=0.043 Sum_probs=92.5
Q ss_pred HHHhhhHHHhhc--CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCC-hHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 385 SKKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM-PQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 385 ~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
+..|+..+...+ +++++++.++++++++|. |..+|++++.+....|. +++++++++++|+++|.+..||++++.++
T Consensus 111 W~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll 189 (331)
T 3dss_A 111 WHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLL 189 (331)
T ss_dssp HHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 347888888877 599999999999999999 99999999999999999 59999999999999999999999999999
Q ss_pred HHC--------------CCHHHHHHHHHHHHccccccc
Q 011353 462 FAL--------------GKENEAQAALREASILENKKS 485 (488)
Q Consensus 462 ~~~--------------~~~~~A~~~~~~al~ld~~~~ 485 (488)
..+ +.++++++++.+|+.++|.+.
T Consensus 190 ~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 190 PQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 988 569999999999999999764
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.84 E-value=5.7e-09 Score=102.21 Aligned_cols=101 Identities=10% Similarity=-0.014 Sum_probs=75.6
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC------CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCch-----
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV------SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH----- 451 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~----- 451 (488)
..+...|..++..|++++|+..|++|+++.+.. ...++.++|.+|..+|++++|++.+++|+++.+...
T Consensus 144 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 223 (383)
T 3ulq_A 144 EFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLM 223 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHH
Confidence 334477888888888888888888888774431 245778888888888888888888888888755442
Q ss_pred -HHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 452 -MAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 452 -~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
.+++++|.+|..+|++++|++.|++|+++...
T Consensus 224 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 224 GRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 57888888888888888888888888876543
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.84 E-value=9.3e-09 Score=84.79 Aligned_cols=90 Identities=10% Similarity=0.000 Sum_probs=81.7
Q ss_pred hcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcC---ChHHHHHHHHHhHhhC-C-CchHHHHHHHHHHHHCCCHHH
Q 011353 395 HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD---MPQEALNDASQAQVIS-P-VWHMAAYLQAAALFALGKENE 469 (488)
Q Consensus 395 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~~ 469 (488)
..+.+.+.+.|.++++.++. +..+.++.|.++.+.+ ++++|+..++.+++.+ | +..+++|++|.+|+++|+|++
T Consensus 11 ~~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 11 VEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 35567888899999998887 9999999999999988 7779999999999999 7 679999999999999999999
Q ss_pred HHHHHHHHHccccccc
Q 011353 470 AQAALREASILENKKS 485 (488)
Q Consensus 470 A~~~~~~al~ld~~~~ 485 (488)
|+++++++|+++|++.
T Consensus 90 A~~y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNN 105 (152)
T ss_dssp HHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhcCCCCH
Confidence 9999999999999764
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.84 E-value=7.5e-09 Score=91.12 Aligned_cols=130 Identities=13% Similarity=-0.060 Sum_probs=96.1
Q ss_pred HHHHHhcCCCccchhhhhhhhhhhhhhH----------hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhc---CCC---CC
Q 011353 353 EILEKLGYKDDEGAATELSFQMWTGQMQ----------ETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTM---VS 416 (488)
Q Consensus 353 ~~l~~~g~~~~~~~~~~~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~---~~ 416 (488)
..+..+|......+..+.+...+.+++. ....+...|..+...|++++|++.|++++++ .++ ..
T Consensus 27 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 106 (203)
T 3gw4_A 27 GARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAA 106 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHH
Confidence 3444444333333444444444444443 2333448899999999999999999999988 332 13
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc------hHHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 417 PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------HMAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
..++.++|.++..+|++++|+..+++++++.+.. ..++.++|.++..+|++++|++.|++|+++-.
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 107 SANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999996432 34568999999999999999999999998764
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.83 E-value=1e-08 Score=83.19 Aligned_cols=82 Identities=12% Similarity=0.021 Sum_probs=72.5
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC---HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+...|..++..|+|++|+..|+++++.+|+ + ..+++++|.+|..+|++++|+..++++++..|++..+...+..+
T Consensus 41 ~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l 119 (129)
T 2xev_A 41 ALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERL 119 (129)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 4458999999999999999999999999999 7 88899999999999999999999999999999998887777665
Q ss_pred HHHCCC
Q 011353 461 LFALGK 466 (488)
Q Consensus 461 ~~~~~~ 466 (488)
....++
T Consensus 120 ~~l~~~ 125 (129)
T 2xev_A 120 QSIRLG 125 (129)
T ss_dssp HHHC--
T ss_pred HHHHhh
Confidence 554443
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.81 E-value=1e-08 Score=90.18 Aligned_cols=99 Identities=13% Similarity=0.053 Sum_probs=88.0
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHh------cCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhh---CC----
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFID------VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---SP---- 448 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l---~p---- 448 (488)
...+...|..++..|+|++|+..|+++++ ..+. ...++.++|.+|..+|++++|+..+++++++ .+
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 104 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHH
Confidence 44566889999999999999999999998 4444 6788999999999999999999999999999 33
Q ss_pred CchHHHHHHHHHHHHCCCHHHHHHHHHHHHccc
Q 011353 449 VWHMAAYLQAAALFALGKENEAQAALREASILE 481 (488)
Q Consensus 449 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld 481 (488)
..+.+++++|.++..+|++++|+..|++++++.
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 346789999999999999999999999999874
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=7.3e-08 Score=91.34 Aligned_cols=98 Identities=8% Similarity=-0.097 Sum_probs=89.4
Q ss_pred HhhhHHHhhcC----------HHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCC--hHHHHHHHHHhHhhCCCchHHH
Q 011353 387 KKGDVAFRHKD----------FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM--PQEALNDASQAQVISPVWHMAA 454 (488)
Q Consensus 387 ~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~al~l~p~~~~a~ 454 (488)
.|+..+...+. +++++..++++|..+|+ +..+|+.|+.++..+++ ++++++.++++++++|.+..||
T Consensus 69 ~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW 147 (331)
T 3dss_A 69 CRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCW 147 (331)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHH
Confidence 66666665554 79999999999999999 99999999999999994 8999999999999999999999
Q ss_pred HHHHHHHHHCCC-HHHHHHHHHHHHccccccc
Q 011353 455 YLQAAALFALGK-ENEAQAALREASILENKKS 485 (488)
Q Consensus 455 ~~~g~~~~~~~~-~~~A~~~~~~al~ld~~~~ 485 (488)
+.++.++..+|. ++++++++.++++.+|.+.
T Consensus 148 ~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 148 DYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCH
Confidence 999999999999 6999999999999998764
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.3e-08 Score=102.31 Aligned_cols=104 Identities=12% Similarity=-0.008 Sum_probs=88.0
Q ss_pred hhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcC-----CCC--CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhC--
Q 011353 377 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVG-----TMV--SPTAFARRSLSYLMSDMPQEALNDASQAQVIS-- 447 (488)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-----p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-- 447 (488)
..++.+....+++..+..+|+|++|+..|++++++. |++ -...+.++|.+|..+|+|++|+..+++||++.
T Consensus 304 ~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 304 EMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 344455566677778889999999999999999652 331 45679999999999999999999999999874
Q ss_pred ------CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcc
Q 011353 448 ------PVWHMAAYLQAAALFALGKENEAQAALREASIL 480 (488)
Q Consensus 448 ------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 480 (488)
|+-+..++++|.+|..+|+|++|+..|++|+++
T Consensus 384 ~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 384 LYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 444778999999999999999999999999986
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=3e-08 Score=94.45 Aligned_cols=90 Identities=8% Similarity=-0.053 Sum_probs=84.6
Q ss_pred hcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcC-ChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC-C-CHHHHH
Q 011353 395 HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-MPQEALNDASQAQVISPVWHMAAYLQAAALFAL-G-KENEAQ 471 (488)
Q Consensus 395 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~-~-~~~~A~ 471 (488)
.+..++|++.++++|.++|+ +..+|+.|+.++..+| .++++++.++++|+++|++..+|+.++.++..+ + ++++++
T Consensus 67 ~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL 145 (349)
T 3q7a_A 67 EEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEI 145 (349)
T ss_dssp TCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred CCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHH
Confidence 34557899999999999999 9999999999999999 599999999999999999999999999999998 8 999999
Q ss_pred HHHHHHHccccccc
Q 011353 472 AALREASILENKKS 485 (488)
Q Consensus 472 ~~~~~al~ld~~~~ 485 (488)
+.+.+++++||++.
T Consensus 146 ~~~~k~L~~dpkNy 159 (349)
T 3q7a_A 146 EYIHGSLLPDPKNY 159 (349)
T ss_dssp HHHHHHTSSCTTCH
T ss_pred HHHHHHHHhCCCCH
Confidence 99999999999764
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.4e-08 Score=99.41 Aligned_cols=98 Identities=13% Similarity=0.119 Sum_probs=87.5
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC------HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc------h
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------H 451 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~ 451 (488)
.+...|..++..|++++|+..|++++++.|. . ..++.++|.+|..+|++++|+..+++++++.+.. +
T Consensus 229 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 307 (406)
T 3sf4_A 229 AYSNLGNAYIFLGEFETASEYYKKTLLLARQ-LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEG 307 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-CcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 4458899999999999999999999988776 4 6789999999999999999999999999986654 7
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
.++..+|.+|..+|++++|++.|++|+++.+
T Consensus 308 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 338 (406)
T 3sf4_A 308 RACWSLGNAYTALGNHDQAMHFAEKHLEISR 338 (406)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999998843
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.78 E-value=9.6e-08 Score=78.91 Aligned_cols=91 Identities=12% Similarity=0.004 Sum_probs=84.7
Q ss_pred hhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh----cCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH
Q 011353 388 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 463 (488)
Q Consensus 388 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (488)
.|..+...+.+++|++.|++|.+. . +..+++++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 788888889999999999999998 4 79999999999999 89999999999999987 789999999999999
Q ss_pred ----CCCHHHHHHHHHHHHccccc
Q 011353 464 ----LGKENEAQAALREASILENK 483 (488)
Q Consensus 464 ----~~~~~~A~~~~~~al~ld~~ 483 (488)
.+++++|+++|++|.++...
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCH
Confidence 99999999999999998643
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.76 E-value=4.9e-08 Score=87.14 Aligned_cols=115 Identities=10% Similarity=-0.031 Sum_probs=94.2
Q ss_pred hhhhhhhhhhhhH--hhhhHHHhhhHHHh----hcCHHHHHHHHHHHHhcCCC-CCHHHHhhHHHHHHh----cCChHHH
Q 011353 368 TELSFQMWTGQMQ--ETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTM-VSPTAFARRSLSYLM----SDMPQEA 436 (488)
Q Consensus 368 ~~~a~~~~~~~~~--~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~----~~~~~~A 436 (488)
...++..+.++.+ ........|..+.. .+++++|++.|++|++..|. ..+.+++++|.+|.. .+++++|
T Consensus 69 ~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A 148 (212)
T 3rjv_A 69 YPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKA 148 (212)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 4444444444433 23344588888887 89999999999999999883 148999999999999 8999999
Q ss_pred HHHHHHhHhhCCCchHHHHHHHHHHHHC-C-----CHHHHHHHHHHHHccccc
Q 011353 437 LNDASQAQVISPVWHMAAYLQAAALFAL-G-----KENEAQAALREASILENK 483 (488)
Q Consensus 437 ~~~~~~al~l~p~~~~a~~~~g~~~~~~-~-----~~~~A~~~~~~al~ld~~ 483 (488)
+..|++|+++ |.++.+++++|.+|... | ++++|+.+|++|++....
T Consensus 149 ~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~ 200 (212)
T 3rjv_A 149 SEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFD 200 (212)
T ss_dssp HHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 9999999999 77889999999999865 3 899999999999988643
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.76 E-value=6.4e-09 Score=102.52 Aligned_cols=128 Identities=13% Similarity=0.023 Sum_probs=103.9
Q ss_pred HHHHHhcCCCccchhhhhhhhhhhhhhHhhh--------hHHHhhhHHHhhcCHHHHHHHHHHHHhc------CCCCCHH
Q 011353 353 EILEKLGYKDDEGAATELSFQMWTGQMQETL--------NSKKKGDVAFRHKDFRASIECYTQFIDV------GTMVSPT 418 (488)
Q Consensus 353 ~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~ 418 (488)
..+..+|......+....+...+.+++...+ -+...|..++..|++++|+..|++++++ +|. ...
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~ 127 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG-EAK 127 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH-HHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH-HHH
Confidence 3343444433334445555555555554332 3458999999999999999999999988 566 788
Q ss_pred HHhhHHHHHHhcCChHHHHHHHHHhHhh------CCCchHHHHHHHHHHHHCCC-----------------HHHHHHHHH
Q 011353 419 AFARRSLSYLMSDMPQEALNDASQAQVI------SPVWHMAAYLQAAALFALGK-----------------ENEAQAALR 475 (488)
Q Consensus 419 ~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~~~~a~~~~g~~~~~~~~-----------------~~~A~~~~~ 475 (488)
++.++|.+|..+|++++|+..+++++++ .|....+++++|.+|..+|+ +++|++.|+
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~ 207 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQ 207 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHH
Confidence 9999999999999999999999999999 67788899999999999999 999999999
Q ss_pred HHHccc
Q 011353 476 EASILE 481 (488)
Q Consensus 476 ~al~ld 481 (488)
+++++.
T Consensus 208 ~al~~~ 213 (411)
T 4a1s_A 208 ENLKLM 213 (411)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.1e-08 Score=79.77 Aligned_cols=80 Identities=11% Similarity=-0.015 Sum_probs=68.6
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCch--HHHHHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH--MAAYLQAAAL 461 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~--~a~~~~g~~~ 461 (488)
.+...|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|+.. .+...+...+
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l 99 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFL 99 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 4458899999999999999999999999999 999999999999999999999999999999998653 4444444444
Q ss_pred HHC
Q 011353 462 FAL 464 (488)
Q Consensus 462 ~~~ 464 (488)
..+
T Consensus 100 ~~l 102 (115)
T 2kat_A 100 RRL 102 (115)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.74 E-value=1.3e-08 Score=82.18 Aligned_cols=100 Identities=15% Similarity=0.121 Sum_probs=81.5
Q ss_pred chhhhhhhhhhhhhhHhh----hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC-------HHHHhhHHHHHHhcCCh
Q 011353 365 GAATELSFQMWTGQMQET----LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS-------PTAFARRSLSYLMSDMP 433 (488)
Q Consensus 365 ~~~~~~a~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-------~~~~~~~~~~~~~~~~~ 433 (488)
.+....+...+..++... ..+...|..++..|+|++|+..|+++++++|+ + ..+++++|.++..+|++
T Consensus 17 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~ 95 (131)
T 1elr_A 17 KKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFKEEKY 95 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhccH
Confidence 344455555555544433 23448899999999999999999999999987 6 88999999999999999
Q ss_pred HHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCC
Q 011353 434 QEALNDASQAQVISPVWHMAAYLQAAALFALGK 466 (488)
Q Consensus 434 ~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 466 (488)
++|+..++++++++| +...+..++.++..+++
T Consensus 96 ~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 96 KDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 999999999999999 58888888888766543
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.74 E-value=2.3e-08 Score=94.78 Aligned_cols=99 Identities=13% Similarity=0.122 Sum_probs=85.1
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC------HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc------h
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------H 451 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~ 451 (488)
.+...|..+...|++++|+..|++++++.+. . ..++.++|.++..+|++++|+..+++++++.+.. .
T Consensus 225 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 303 (338)
T 3ro2_A 225 AYSNLGNAYIFLGEFETASEYYKKTLLLARQ-LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 303 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 4458899999999999999999999988766 4 6788999999999999999999999999987654 5
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
.++..+|.+|..+|++++|+..|++++++.++
T Consensus 304 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 304 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 58889999999999999999999999988654
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.74 E-value=3.1e-08 Score=88.44 Aligned_cols=111 Identities=10% Similarity=-0.047 Sum_probs=92.0
Q ss_pred hhhhhhhhhhhhhhHh--hhhHHHhhhHHHhhc----CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh----cCChHH
Q 011353 366 AATELSFQMWTGQMQE--TLNSKKKGDVAFRHK----DFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQE 435 (488)
Q Consensus 366 ~~~~~a~~~~~~~~~~--~~~~~~~g~~~~~~~----~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~ 435 (488)
+....++..+.++.+. .......|..+.. + ++++|++.|++|++ +. +..+++++|.+|.. .+++++
T Consensus 32 ~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g-~~~a~~~Lg~~y~~g~g~~~d~~~ 107 (212)
T 3rjv_A 32 GDYQKAEYWAQKAAAQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG-SKSGEIVLARVLVNRQAGATDVAH 107 (212)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHTCGGGSSCCHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC-CHHHHHHHHHHHHcCCCCccCHHH
Confidence 3445555555554432 3444578888887 6 99999999999965 45 78999999999998 899999
Q ss_pred HHHHHHHhHhhCC--CchHHHHHHHHHHHH----CCCHHHHHHHHHHHHcc
Q 011353 436 ALNDASQAQVISP--VWHMAAYLQAAALFA----LGKENEAQAALREASIL 480 (488)
Q Consensus 436 A~~~~~~al~l~p--~~~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 480 (488)
|+..|++|++..| +++.+++++|.+|.. .+++++|+.+|++|+++
T Consensus 108 A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 108 AITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 9999999999998 569999999999999 89999999999999988
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=3.4e-08 Score=97.69 Aligned_cols=95 Identities=11% Similarity=-0.108 Sum_probs=80.3
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhc-----CCCC--CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhC--------CCch
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDV-----GTMV--SPTAFARRSLSYLMSDMPQEALNDASQAQVIS--------PVWH 451 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--------p~~~ 451 (488)
..+......|+|++|+..|++++++ .|++ -...+.++|.+|..+|+|++|+..++++|++. |+-+
T Consensus 303 e~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 382 (433)
T 3qww_A 303 EEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVA 382 (433)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHH
T ss_pred HHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 4444445678999999999999975 3441 34679999999999999999999999999873 4557
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHccc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASILE 481 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ld 481 (488)
..++++|.+|..+|+|++|+..|++|+++-
T Consensus 383 ~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 383 SMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999873
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.70 E-value=9.5e-08 Score=74.65 Aligned_cols=77 Identities=13% Similarity=0.004 Sum_probs=69.7
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcC-------CCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVG-------TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAA 454 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 454 (488)
+.+....|..+++.++|..|+.-|++|++.. +. ...++.++|.||.++|++++|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 4566789999999999999999999999864 23 578999999999999999999999999999999999999
Q ss_pred HHHHH
Q 011353 455 YLQAA 459 (488)
Q Consensus 455 ~~~g~ 459 (488)
.+++.
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 88874
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.68 E-value=1.7e-07 Score=89.05 Aligned_cols=133 Identities=11% Similarity=0.043 Sum_probs=92.1
Q ss_pred HHHHHHHHhcCCCc-cchhhhhhhhhhhhhhHhhhhHH----HhhhHHHh---hc----CHHHHHH-HHH--HHHhcCCC
Q 011353 350 AIHEILEKLGYKDD-EGAATELSFQMWTGQMQETLNSK----KKGDVAFR---HK----DFRASIE-CYT--QFIDVGTM 414 (488)
Q Consensus 350 ~~~~~l~~~g~~~~-~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~---~~----~~~~A~~-~~~--~ai~~~p~ 414 (488)
...-.+...++-.. .......+..-+.++++..+++. .++..+.- .+ ...+++. .+. .++.++|.
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~ 275 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN 275 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCc
Confidence 44444444443211 23345666777777777777654 22332221 11 1111111 122 23466788
Q ss_pred CCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 415 VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
++.+|..++..+...|++++|+..+++|+.++|+ +.+|..+|.++...|++++|++.|++|+.++|..
T Consensus 276 -~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 276 -LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred -CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 8888888888888899999999999999999985 6888999999999999999999999999999854
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.63 E-value=4.4e-08 Score=95.70 Aligned_cols=101 Identities=13% Similarity=0.007 Sum_probs=85.9
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC------CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCC------
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV------SPTAFARRSLSYLMSDMPQEALNDASQAQVISPV------ 449 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~------ 449 (488)
+..+...|..++..|++++|+..|++|+++.+.. ...+++++|.+|..+|++++|++.+++|+++.+.
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 220 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRF 220 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 3344588999999999999999999999875431 2557889999999999999999999999999542
Q ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 450 WHMAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 450 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
.+.+++++|.+|..+|++++|++.|++|+++-.
T Consensus 221 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 253 (378)
T 3q15_A 221 IAISLLNIANSYDRSGDDQMAVEHFQKAAKVSR 253 (378)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 257889999999999999999999999998754
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=1.4e-07 Score=89.40 Aligned_cols=134 Identities=13% Similarity=0.050 Sum_probs=91.6
Q ss_pred cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCC---CcccEEEEEe-eCCeeEEEEecCCC
Q 011353 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR---RLANLLGCCC-EGDERLLVAEYMPN 137 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~E~~~~ 137 (488)
+..++.|....||+. +..++||+... ......+.+|..+|+.|.+. .+++.+.++. ..+..++|||+++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 345678888899988 45688888532 12345789999999999642 3677777774 44567899999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------------
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------- 174 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------------- 174 (488)
.+|.+... ..++......++.+++..|..||+.
T Consensus 98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 88876321 1134444444455555444444432
Q ss_pred ----------------CCcccccccCcceeeCC---CCC-eeeecCCCccc
Q 011353 175 ----------------ERALYHDLNAYRIVFDD---DVN-PRLSCFGLMKN 205 (488)
Q Consensus 175 ----------------~~iiH~Dlkp~Nill~~---~~~-~kl~DfGla~~ 205 (488)
..++|+|++|.|||++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 14699999999999987 455 48999998754
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1.6e-07 Score=93.11 Aligned_cols=97 Identities=15% Similarity=0.052 Sum_probs=82.3
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcC-----CCC--CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhC--------C
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVG-----TMV--SPTAFARRSLSYLMSDMPQEALNDASQAQVIS--------P 448 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-----p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--------p 448 (488)
+.......+.++|+|++|+..|++++++. |++ -...+.++|.+|..+|+|++|+..++++|++. |
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 34455566778899999999999999763 331 34679999999999999999999999999864 4
Q ss_pred CchHHHHHHHHHHHHCCCHHHHHHHHHHHHcc
Q 011353 449 VWHMAAYLQAAALFALGKENEAQAALREASIL 480 (488)
Q Consensus 449 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 480 (488)
+-+..++++|.+|..+|++++|+..|++|+++
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 44778999999999999999999999999987
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=2.3e-07 Score=84.61 Aligned_cols=89 Identities=12% Similarity=0.041 Sum_probs=80.3
Q ss_pred cCHHHHHHHHHHHHhcCCCC-CHHHHhhHHHHHHhc-----CChHHHHHHHHHhHhhCCCc-hHHHHHHHHHHHH-CCCH
Q 011353 396 KDFRASIECYTQFIDVGTMV-SPTAFARRSLSYLMS-----DMPQEALNDASQAQVISPVW-HMAAYLQAAALFA-LGKE 467 (488)
Q Consensus 396 ~~~~~A~~~~~~ai~~~p~~-~~~~~~~~~~~~~~~-----~~~~~A~~~~~~al~l~p~~-~~a~~~~g~~~~~-~~~~ 467 (488)
+....|...+++||++||+. +..+|..+|..|... |+.++|.++|++||+++|+. ..+++.+|..+.. .|++
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~ 256 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNR 256 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCH
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCH
Confidence 44689999999999999982 345899999999995 99999999999999999975 9999999999988 5999
Q ss_pred HHHHHHHHHHHcccccc
Q 011353 468 NEAQAALREASILENKK 484 (488)
Q Consensus 468 ~~A~~~~~~al~ld~~~ 484 (488)
++|.+.+++|++.+|..
T Consensus 257 ~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 257 AGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 99999999999998863
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.51 E-value=4.1e-07 Score=93.12 Aligned_cols=95 Identities=5% Similarity=-0.103 Sum_probs=66.9
Q ss_pred HhhhHHHh-------hcCHH-------HHHHHHHHHHh-cCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCch
Q 011353 387 KKGDVAFR-------HKDFR-------ASIECYTQFID-VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 451 (488)
Q Consensus 387 ~~g~~~~~-------~~~~~-------~A~~~~~~ai~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~ 451 (488)
..|..+.+ .|+++ +|+..|++|++ ++|+ +..+|..++.++...|++++|...|+++++++|+++
T Consensus 277 ~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 355 (530)
T 2ooe_A 277 EAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDP 355 (530)
T ss_dssp HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCH
T ss_pred HHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCc
Confidence 55555553 56765 77777777776 6777 777777777777777777777777777777777764
Q ss_pred -HHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 452 -MAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 452 -~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
.+|..+|.++...|++++|++.|++|++..|
T Consensus 356 ~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~ 387 (530)
T 2ooe_A 356 TLVYIQYMKFARRAEGIKSGRMIFKKAREDAR 387 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHhccC
Confidence 5777777777777777777777777776654
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=5.7e-07 Score=83.44 Aligned_cols=126 Identities=15% Similarity=0.058 Sum_probs=90.0
Q ss_pred CeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEecCCCCCHHhhhccCC
Q 011353 71 NVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 148 (488)
Q Consensus 71 g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~ 148 (488)
..||+... .++..+.||+-.. .....+.+|...|+.+. +--++++++++.+.+..++|||+++|.++.+.....
T Consensus 39 ~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~- 114 (272)
T 4gkh_A 39 ATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY- 114 (272)
T ss_dssp CEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC-
T ss_pred CeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCC-
Confidence 36998874 4567789998653 23456888999999884 444788999999999999999999998877654221
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------------------
Q 011353 149 TQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------------------ 174 (488)
Q Consensus 149 ~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------------------------ 174 (488)
......+..+++..|.-||..
T Consensus 115 -----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 189 (272)
T 4gkh_A 115 -----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPF 189 (272)
T ss_dssp -----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCC
T ss_pred -----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccc
Confidence 112223444444445444430
Q ss_pred ---CCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 175 ---ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 175 ---~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
..++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 190 ~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 190 SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 1268999999999999877778999998643
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.50 E-value=4.5e-07 Score=88.10 Aligned_cols=96 Identities=13% Similarity=0.036 Sum_probs=85.3
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcC--------CCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCC-----ch
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVG--------TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV-----WH 451 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~-----~~ 451 (488)
....|..++..|+|++|+..|++++++. |. ...++.++|.++..+|++++|+..+++++++.+. ..
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 174 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL 174 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHH
Confidence 3478999999999999999999999875 33 4567888999999999999999999999999875 35
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHccc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASILE 481 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ld 481 (488)
.++..+|.++...|++++|+..+++++++.
T Consensus 175 ~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 175 QCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999874
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.9e-07 Score=86.12 Aligned_cols=93 Identities=13% Similarity=0.063 Sum_probs=83.7
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc--hHHHHHHHHHHHHC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--HMAAYLQAAALFAL 464 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~ 464 (488)
..+..+...|+|++|.+.|+.++...|. .. .++.+|.++.+.++|++|+..++++++..+.. ..+++++|.++..+
T Consensus 107 ayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~L 184 (282)
T 4f3v_A 107 GFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANL 184 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHC
Confidence 6778889999999999999999999998 67 99999999999999999999999998874332 46999999999999
Q ss_pred CCHHHHHHHHHHHHccc
Q 011353 465 GKENEAQAALREASILE 481 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld 481 (488)
|++++|+..|++++.-.
T Consensus 185 G~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 185 ALFTEAERRLTEANDSP 201 (282)
T ss_dssp TCHHHHHHHHHHHHTST
T ss_pred CCHHHHHHHHHHHhcCC
Confidence 99999999999998543
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.45 E-value=4.7e-07 Score=92.72 Aligned_cols=97 Identities=9% Similarity=-0.015 Sum_probs=81.5
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHH-HHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS-YLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 463 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (488)
+...|..+.+.|++++|.+.|++|++..|. ....+...+.+ +...|++++|...|++|++.+|+++.+|..+|.++..
T Consensus 359 ~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~ 437 (530)
T 2ooe_A 359 YIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 437 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHh
Confidence 446777777889999999999999998887 66666555544 4568999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHcccc
Q 011353 464 LGKENEAQAALREASILEN 482 (488)
Q Consensus 464 ~~~~~~A~~~~~~al~ld~ 482 (488)
+|++++|...|++|++..|
T Consensus 438 ~g~~~~Ar~~~~~al~~~~ 456 (530)
T 2ooe_A 438 LNEDNNTRVLFERVLTSGS 456 (530)
T ss_dssp TTCHHHHHHHHHHHHHSCC
T ss_pred CCCHhhHHHHHHHHHhccC
Confidence 9999999999999998754
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2.9e-07 Score=89.18 Aligned_cols=81 Identities=5% Similarity=-0.050 Sum_probs=57.0
Q ss_pred cccC-CCCCCCeEEEEEeC-------CCCEEEEEEcCCCC---CccHHHHHHHHHHHhccC-C--CCcccEEEEEeeC--
Q 011353 62 VSEH-GEKAPNVVYKGKLE-------NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLR-N--RRLANLLGCCCEG-- 125 (488)
Q Consensus 62 i~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~-- 125 (488)
++.| +.|..+.+|+.... ++..+++|+..... ......+.+|+.+++.|. + -.+++++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4556 78888999998754 25678899865422 111235778999988884 3 3578888887665
Q ss_pred -CeeEEEEecCCCCCHHh
Q 011353 126 -DERLLVAEYMPNDTLAK 142 (488)
Q Consensus 126 -~~~~lv~E~~~~gsL~~ 142 (488)
+..++|||+++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999877653
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.41 E-value=4.7e-07 Score=87.96 Aligned_cols=99 Identities=16% Similarity=0.175 Sum_probs=86.0
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC-----HHHHhhHHHHHHhcCChHHHHHHHHHhHhhC--------CCch
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVS-----PTAFARRSLSYLMSDMPQEALNDASQAQVIS--------PVWH 451 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--------p~~~ 451 (488)
+...|..++..|++++|+..|++++.+.|... ..++.++|.++..+|++++|+..+++++++. |...
T Consensus 56 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~ 135 (373)
T 1hz4_A 56 TSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHE 135 (373)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHH
Confidence 44778899999999999999999998876521 2347889999999999999999999999986 4556
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
.++.++|.++...|++++|+..+++++++.+.
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 136 FLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 78889999999999999999999999988653
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.40 E-value=1.1e-06 Score=68.39 Aligned_cols=70 Identities=9% Similarity=-0.144 Sum_probs=62.5
Q ss_pred CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhC-------CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 416 SPTAFARRSLSYLMSDMPQEALNDASQAQVIS-------PVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
++.-.+.+|..++.+|+|..|+..|++|++.. +..+..+..+|.+++.+|++++|+..+++|++++|+..
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 34556789999999999999999999999974 45688999999999999999999999999999998753
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.33 E-value=2.4e-06 Score=86.48 Aligned_cols=94 Identities=15% Similarity=0.034 Sum_probs=83.2
Q ss_pred hHHHhhhHHHhhc---CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh----cCChHHHHHHHHHhHhhCCCchHHHHH
Q 011353 384 NSKKKGDVAFRHK---DFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYL 456 (488)
Q Consensus 384 ~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (488)
.....|..++..| ++++|++.|++|++. . +..+++++|.+|.. .+++++|+..|++|++.. ++.++++
T Consensus 330 a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~ 404 (490)
T 2xm6_A 330 AQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQ 404 (490)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred HHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHH
Confidence 3447788887755 899999999999987 4 78999999999999 899999999999999874 6899999
Q ss_pred HHHHHHH----CCCHHHHHHHHHHHHcccc
Q 011353 457 QAAALFA----LGKENEAQAALREASILEN 482 (488)
Q Consensus 457 ~g~~~~~----~~~~~~A~~~~~~al~ld~ 482 (488)
+|.+|.. .+++++|+++|++|++.+|
T Consensus 405 Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 405 LGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 9999998 8999999999999999983
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.30 E-value=2.5e-06 Score=70.30 Aligned_cols=80 Identities=16% Similarity=0.042 Sum_probs=72.6
Q ss_pred hcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH----CCCHHHH
Q 011353 395 HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA----LGKENEA 470 (488)
Q Consensus 395 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A 470 (488)
.+|+++|++.|++|.+.... .+. +|.+|...+.+++|++.|++|.+. +++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-THH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 46899999999999998754 444 999999999999999999999998 789999999999999 8999999
Q ss_pred HHHHHHHHccc
Q 011353 471 QAALREASILE 481 (488)
Q Consensus 471 ~~~~~~al~ld 481 (488)
+++|++|.+..
T Consensus 81 ~~~~~~Aa~~g 91 (138)
T 1klx_A 81 AQYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 99999999875
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.29 E-value=3e-06 Score=64.33 Aligned_cols=69 Identities=10% Similarity=-0.086 Sum_probs=61.0
Q ss_pred hhHHHhhhHHHhhcC---HHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchH
Q 011353 383 LNSKKKGDVAFRHKD---FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM 452 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~ 452 (488)
..+...|..++-.++ ..+|...+++|+++||+ +..+++.+|..+++.|+|++|+..++++++.+|..+.
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 345577888865554 79999999999999999 9999999999999999999999999999999998533
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.7e-06 Score=85.21 Aligned_cols=92 Identities=10% Similarity=-0.004 Sum_probs=62.6
Q ss_pred HHhhhHHHhhc---CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc----CChHHHHHHHHHhHhhCCCchHHHHHHH
Q 011353 386 KKKGDVAFRHK---DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS----DMPQEALNDASQAQVISPVWHMAAYLQA 458 (488)
Q Consensus 386 ~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (488)
...|..+...| ++++|++.|+++++..|. .+..++++|.+|... +++++|+..|++|. |+++.+++++|
T Consensus 180 ~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg 255 (452)
T 3e4b_A 180 VELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLA 255 (452)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHH
T ss_pred HHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHH
Confidence 36666666666 777777777777777776 666666777776554 56777777777766 67777777777
Q ss_pred HH-H--HHCCCHHHHHHHHHHHHccc
Q 011353 459 AA-L--FALGKENEAQAALREASILE 481 (488)
Q Consensus 459 ~~-~--~~~~~~~~A~~~~~~al~ld 481 (488)
.+ | ...+++++|+++|++|++.+
T Consensus 256 ~~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 256 QLLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 76 3 35667777777777776554
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=3.7e-06 Score=82.63 Aligned_cols=76 Identities=13% Similarity=0.045 Sum_probs=51.0
Q ss_pred ccccCCCCCCCeEEEEEeC-CCCEEEEEEcCCCCC-------ccHHHHHHHHHHHhccC-C-C-CcccEEEEEeeCCeeE
Q 011353 61 IVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-------PDARQFLEEARAVGQLR-N-R-RLANLLGCCCEGDERL 129 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~-h-~-niv~l~~~~~~~~~~~ 129 (488)
.+..+|.|.++.||++... +++.++||....... ....++..|..+++.+. + + .+++++.+ +.+..+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 3567899999999999743 567899998653211 12345678999988873 2 3 45566654 345568
Q ss_pred EEEecCCCC
Q 011353 130 LVAEYMPND 138 (488)
Q Consensus 130 lv~E~~~~g 138 (488)
+|||++++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999774
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.23 E-value=7.3e-06 Score=78.64 Aligned_cols=138 Identities=10% Similarity=0.105 Sum_probs=80.1
Q ss_pred cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCC--CCcccEEE------EEeeCCeeEEEEe
Q 011353 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLANLLG------CCCEGDERLLVAE 133 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~E 133 (488)
+..++.|..+.||+....+| .+++|+.... ...+..|..++..|.. -.+++++. +....+..++|||
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34566678899999987665 5889998752 2344456666665531 12344443 1234667899999
Q ss_pred cCCCCCHH-----------hh---hcc--CC---C-------CCCCHHHH------------------------------
Q 011353 134 YMPNDTLA-----------KH---LFH--WE---T-------QPMKWAMR------------------------------ 157 (488)
Q Consensus 134 ~~~~gsL~-----------~~---l~~--~~---~-------~~l~~~~~------------------------------ 157 (488)
|++|.++. .. ++. .. . ..-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 11 111 00 0 00123211
Q ss_pred -HHHHHHHHHHHHHhhc------------CCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 158 -LRVALHIAEALEYCTS------------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 158 -~~i~~qi~~~L~~LH~------------~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
..+...+..++.+|+. ...++|+|+++.|||++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111123345556642 2379999999999999888899999999764
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.8e-06 Score=86.80 Aligned_cols=99 Identities=9% Similarity=-0.026 Sum_probs=84.1
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhc-----CCCC--CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhC-----CC
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDV-----GTMV--SPTAFARRSLSYLMSDMPQEALNDASQAQVIS-----PV 449 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-----p~ 449 (488)
+..+.+.|..+..+|+|++|+..|+++|++ -|++ -+..++|+|.+|..+|+|++|+..|++|+++. |+
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 344558999999999999999999999965 2331 45679999999999999999999999999863 55
Q ss_pred c---hHHHHHHHHHHHHCCCHHHHHHHHHHHHcc
Q 011353 450 W---HMAAYLQAAALFALGKENEAQAALREASIL 480 (488)
Q Consensus 450 ~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 480 (488)
+ .+...+++.++..++.|++|...|++|.+-
T Consensus 431 Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 431 HPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 666678999999999999999999998753
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.2e-05 Score=81.37 Aligned_cols=89 Identities=9% Similarity=-0.091 Sum_probs=49.1
Q ss_pred HhhhHHHh----hcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh----cCChHHHHHHHHHhHhhCCCchHHHHHHH
Q 011353 387 KKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQA 458 (488)
Q Consensus 387 ~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (488)
..|..+.. .+++++|+..|++|++. . +..+++++|.+|.. .+++++|++.|++|++. +++.+++++|
T Consensus 116 ~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg 190 (490)
T 2xm6_A 116 NLGVMYHEGNGVKVDKAESVKWFRLAAEQ--G-RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSCNQLG 190 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHH
Confidence 45555554 45555666666555543 2 45555555555555 45555555555555554 3455555555
Q ss_pred HHHHH----CCCHHHHHHHHHHHHcc
Q 011353 459 AALFA----LGKENEAQAALREASIL 480 (488)
Q Consensus 459 ~~~~~----~~~~~~A~~~~~~al~l 480 (488)
.+|.. .+++++|++.|++|++.
T Consensus 191 ~~y~~g~g~~~~~~~A~~~~~~a~~~ 216 (490)
T 2xm6_A 191 YMYSRGLGVERNDAISAQWYRKSATS 216 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHhcCCCCCcCHHHHHHHHHHHHHC
Confidence 55555 55555555555555544
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.18 E-value=4.3e-06 Score=68.88 Aligned_cols=80 Identities=14% Similarity=0.008 Sum_probs=69.5
Q ss_pred hhhHHHhhhHHHhhc---CHHHHHHHHHHHHhcC-CCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHH
Q 011353 382 TLNSKKKGDVAFRHK---DFRASIECYTQFIDVG-TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 457 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (488)
.....+.|..+.+.+ ++++|+..+++.++.+ |....+++|++|..|+++|+|++|.++++++|+++|++.+|...+
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk 111 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 111 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 344558888888877 8889999999999999 832789999999999999999999999999999999999988776
Q ss_pred HHHH
Q 011353 458 AAAL 461 (488)
Q Consensus 458 g~~~ 461 (488)
-.+-
T Consensus 112 ~~ie 115 (152)
T 1pc2_A 112 RLID 115 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.14 E-value=1.2e-05 Score=63.76 Aligned_cols=91 Identities=9% Similarity=0.014 Sum_probs=76.7
Q ss_pred hhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHH---HHHHHHHhHhhC-C-CchHHHHHHHHHHHHCCCHH
Q 011353 394 RHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQE---ALNDASQAQVIS-P-VWHMAAYLQAAALFALGKEN 468 (488)
Q Consensus 394 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~ 468 (488)
.....+.+.+.|.+++..++. +...-++.|.++....+... +|..++..++-+ | ..-+.+|.+|.+++++|+|+
T Consensus 13 ~~~~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 344566777888888887776 88999999999998877666 999999998887 5 67889999999999999999
Q ss_pred HHHHHHHHHHccccccc
Q 011353 469 EAQAALREASILENKKS 485 (488)
Q Consensus 469 ~A~~~~~~al~ld~~~~ 485 (488)
+|+++++..|+++|.+.
T Consensus 92 ~A~~~~~~lL~~eP~n~ 108 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNN 108 (126)
T ss_dssp HHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhCCCCH
Confidence 99999999999999764
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.09 E-value=1.3e-05 Score=87.71 Aligned_cols=28 Identities=25% Similarity=0.153 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASI 479 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ 479 (488)
..|..+|.+|.++|++++|++.+++|..
T Consensus 1222 ~ny~rLA~tLvkLge~q~AIEaarKA~n 1249 (1630)
T 1xi4_A 1222 SNFGRLASTLVHLGEYQAAVDGARKANS 1249 (1630)
T ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHhCC
Confidence 4566667777777777777777776643
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.06 E-value=2.5e-05 Score=85.61 Aligned_cols=63 Identities=17% Similarity=0.082 Sum_probs=59.4
Q ss_pred CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 416 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
.+.+|+++|.++...|++++|+..|.+| +++.+|++.|.++..+|+|++|+++|+.|.+.+++
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 6789999999999999999999999886 88999999999999999999999999999988754
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.04 E-value=3.8e-05 Score=76.82 Aligned_cols=90 Identities=12% Similarity=-0.082 Sum_probs=61.2
Q ss_pred HHHhhhH-H--HhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcC-----ChHHHHHHHHHhHhhCCCchHHHHH
Q 011353 385 SKKKGDV-A--FRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-----MPQEALNDASQAQVISPVWHMAAYL 456 (488)
Q Consensus 385 ~~~~g~~-~--~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~al~l~p~~~~a~~~ 456 (488)
....|.. + ...+++++|++.|++|++.. +..+++++|.+|. .| ++++|+..|++|. ++++.++++
T Consensus 251 ~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~ 323 (452)
T 3e4b_A 251 WVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYY 323 (452)
T ss_dssp HHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHH
Confidence 3355665 2 35677777777777777543 5667777777776 34 7777777777777 677777777
Q ss_pred HHHHHHH----CCCHHHHHHHHHHHHccc
Q 011353 457 QAAALFA----LGKENEAQAALREASILE 481 (488)
Q Consensus 457 ~g~~~~~----~~~~~~A~~~~~~al~ld 481 (488)
+|.+|.. ..++++|+.+|++|.+.+
T Consensus 324 Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 324 LGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 7776665 337777777777777654
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.8e-05 Score=73.25 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=60.4
Q ss_pred cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC---CCCcccEEEEEeeCCeeEEEEecCCCC
Q 011353 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~E~~~~g 138 (488)
+..++.|.++.+|+... ++..++||+.... ....+..|...|+.|. ...+++++.++...+..++|||+++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45678999999999986 4567889987532 3566889999999883 357889999988888899999999987
Q ss_pred CH
Q 011353 139 TL 140 (488)
Q Consensus 139 sL 140 (488)
.+
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 64
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.98 E-value=3.4e-05 Score=75.39 Aligned_cols=116 Identities=10% Similarity=0.006 Sum_probs=82.5
Q ss_pred HHHHhcCCCccchhhhhhhhhhhhhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCCh
Q 011353 354 ILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMP 433 (488)
Q Consensus 354 ~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~ 433 (488)
.+..+|-.-...+.++.+...+..+ ..+...|..+++.|+|++|++.|.+| + +...|...+.++...|++
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef 193 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----SNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEF 193 (449)
T ss_dssp -------------CTTTHHHHHHHT----TCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----hhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcH
Confidence 4455565555555566666555544 57889999999999999999999999 4 678888888888889999
Q ss_pred HHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 434 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 434 ~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
+.|...... |.+.|++ ...+...|.+.|++++|+..|++++.+|+.
T Consensus 194 ~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le~a 239 (449)
T 1b89_A 194 RLAQMCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGLERA 239 (449)
T ss_dssp HHHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTC
T ss_pred HHHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHH
Confidence 999766554 4455554 446778899999999999999999988853
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.96 E-value=3.1e-05 Score=76.45 Aligned_cols=96 Identities=10% Similarity=0.024 Sum_probs=82.7
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCC-----CCHHHHhhHHHHHHhcCChHHHHHHHHHhHhh------CCCchHHHH
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTM-----VSPTAFARRSLSYLMSDMPQEALNDASQAQVI------SPVWHMAAY 455 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~~~~a~~ 455 (488)
..|..+...|++++|+..|++++...+. ..+.++.++|.+|..+|+|++|+..+++++.. .+..+.++.
T Consensus 100 ~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~ 179 (434)
T 4b4t_Q 100 LIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHL 179 (434)
T ss_dssp HHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHH
Confidence 4566667789999999999999976432 14678999999999999999999999999876 455588999
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 456 LQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
..|.+|..+|++++|...|++++.+.+
T Consensus 180 ~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 180 LESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 999999999999999999999998754
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.94 E-value=2.5e-05 Score=73.02 Aligned_cols=75 Identities=21% Similarity=0.243 Sum_probs=56.4
Q ss_pred ccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-C--CCcccEEEEEeeCCeeEEEEecCCC
Q 011353 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N--RRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
-+..+|.|..+.||+.+..+|+.|.||+...........|..|...|+.|. . --+++++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 456679999999999999999999999976554334456888999999884 2 2356666553 23789999987
Q ss_pred CC
Q 011353 138 DT 139 (488)
Q Consensus 138 gs 139 (488)
+.
T Consensus 95 ~~ 96 (288)
T 3f7w_A 95 RP 96 (288)
T ss_dssp CC
T ss_pred cC
Confidence 64
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.4e-05 Score=79.01 Aligned_cols=98 Identities=7% Similarity=0.023 Sum_probs=77.4
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC----------------HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCC
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVS----------------PTAFARRSLSYLMSDMPQEALNDASQAQVISP 448 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p 448 (488)
...+|..+.+.|+|++|++.|.++++.+|... ..++.++|.+|..+|++++|++.+.+++++.+
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 44678888899999999999999999888621 13578899999999999999999999988776
Q ss_pred CchHH------HHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 449 VWHMA------AYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 449 ~~~~a------~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
...++ ...+|.++...|++++|+..+++++...+
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 126 (434)
T 4b4t_Q 87 QFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAK 126 (434)
T ss_dssp TSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHH
T ss_pred HccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 65443 34567777778888888888888887654
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.87 E-value=6.4e-05 Score=70.13 Aligned_cols=94 Identities=9% Similarity=0.015 Sum_probs=47.2
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCC-----CCCHHHHhhHHHHHHhcC--ChHHHHHHHHHhHhhCCCc--hHHHHHH
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGT-----MVSPTAFARRSLSYLMSD--MPQEALNDASQAQVISPVW--HMAAYLQ 457 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p-----~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~l~p~~--~~a~~~~ 457 (488)
..+..+.+.|+.+.|.+.+++..+.+| +.....+..-|.+.+..| ++++|+..|+++.+..|++ +..+++
T Consensus 141 l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln- 219 (310)
T 3mv2_B 141 LAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN- 219 (310)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH-
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH-
Confidence 555555555666666666665555555 201122222232233334 5666666666655555542 223333
Q ss_pred HHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 458 AAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
++..+|++++|.+.+++++++.|+
T Consensus 220 --~~~~~g~~~eAe~~L~~l~~~~p~ 243 (310)
T 3mv2_B 220 --LHLQQRNIAEAQGIVELLLSDYYS 243 (310)
T ss_dssp --HHHHHTCHHHHHHHHHHHHSHHHH
T ss_pred --HHHHcCCHHHHHHHHHHHHHhccc
Confidence 556666666666666655555443
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00011 Score=72.50 Aligned_cols=74 Identities=16% Similarity=0.257 Sum_probs=46.3
Q ss_pred ccccCCCCCCCeEEEEEeCCCCEEEEEEcCC-----C-CCc---cHHHHHHHHHHHh-ccCCCCcccEEEEEeeCCeeEE
Q 011353 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNR-----S-AWP---DARQFLEEARAVG-QLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-----~-~~~---~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~~~l 130 (488)
-+..+|.|..+.||++.. ++..++||.... . ... ....+..|+..+. ......+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 456779999999999975 456899994221 0 101 2223434433322 22335677888775 566799
Q ss_pred EEecC-CC
Q 011353 131 VAEYM-PN 137 (488)
Q Consensus 131 v~E~~-~~ 137 (488)
|||++ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00014 Score=68.94 Aligned_cols=161 Identities=11% Similarity=0.117 Sum_probs=90.6
Q ss_pred ccccCHHHHHHHhcCCCccc--ccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCC--cc
Q 011353 41 FCEYSIETLRTATSGFAMEN--IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LA 116 (488)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~--~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv 116 (488)
+..++.+++......|.... -++.++.|....+|+....++ .+++|...... ....+..|+.++..|...+ ++
T Consensus 4 ~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 4 YTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp -CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCC
Confidence 34567777777776665422 345677888899999987666 68899887531 1234566777777774212 33
Q ss_pred cEEEE------EeeCCeeEEEEecCCCCCHHh-----------h---hccC----CCC---CC---CHHHHHH-------
Q 011353 117 NLLGC------CCEGDERLLVAEYMPNDTLAK-----------H---LFHW----ETQ---PM---KWAMRLR------- 159 (488)
Q Consensus 117 ~l~~~------~~~~~~~~lv~E~~~~gsL~~-----------~---l~~~----~~~---~l---~~~~~~~------- 159 (488)
+++.. ....+..++||++++|..+.. . ++.. ... .. .|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 43321 123456789999999865321 0 1110 000 01 1222110
Q ss_pred -----HHHHHHHHHHHhhc------CCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 160 -----VALHIAEALEYCTS------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 160 -----i~~qi~~~L~~LH~------~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
+...+...+..++. ..+++|+|+++.|||++.++.+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113334444431 1268999999999999877666899998764
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00017 Score=59.76 Aligned_cols=93 Identities=11% Similarity=-0.050 Sum_probs=72.1
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC--------HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCC-------
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS--------PTAFARRSLSYLMSDMPQEALNDASQAQVISP------- 448 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~--------~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p------- 448 (488)
.+.+....++..+.|+.|+-..+.++.+..++. +..+...|.+++..++|..|...|++||++.-
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 344667778888999999999888776653311 23778888899999999999999999865431
Q ss_pred ------------------CchHHHHHHHHHHHHCCCHHHHHHHHHH
Q 011353 449 ------------------VWHMAAYLQAAALFALGKENEAQAALRE 476 (488)
Q Consensus 449 ------------------~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 476 (488)
.+.+.-|.+|.||.+++++++|+..++.
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1236789999999999999999998765
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.65 E-value=2.1e-05 Score=76.85 Aligned_cols=54 Identities=17% Similarity=0.015 Sum_probs=34.0
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 011353 417 PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREAS 478 (488)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 478 (488)
...|.+.|.++...|+|++|...|.++ ..|.++|.++..+|+|++|++.|++|.
T Consensus 122 ~~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA~ 175 (449)
T 1b89_A 122 NAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKAN 175 (449)
T ss_dssp ---------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHcC
Confidence 357888888888889999999998877 578889999999999999999999984
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00086 Score=63.63 Aligned_cols=161 Identities=18% Similarity=0.105 Sum_probs=92.2
Q ss_pred ccccCHHHHHHHhcCCCcc--cccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCC--Ccc
Q 011353 41 FCEYSIETLRTATSGFAME--NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR--RLA 116 (488)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~--~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv 116 (488)
+...+.+.+......|... .-+..++ |....||+....+|+.+++|...... .....+..|..++..+... .++
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeec
Confidence 4455666666665544321 1233456 77889999887777789999987432 2345677788888877422 244
Q ss_pred cEEEE-----EeeCCeeEEEEecCCCCCHHh-----------h---hcc----CC---CCCCCHHHH-------------
Q 011353 117 NLLGC-----CCEGDERLLVAEYMPNDTLAK-----------H---LFH----WE---TQPMKWAMR------------- 157 (488)
Q Consensus 117 ~l~~~-----~~~~~~~~lv~E~~~~gsL~~-----------~---l~~----~~---~~~l~~~~~------------- 157 (488)
+++.. ....+..++||++++|.++.. . ++. .. ....++...
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL 165 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence 44432 123456688999998854321 1 110 00 011222111
Q ss_pred ---------HHHHHHHHHHHHHhh---cCCCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 158 ---------LRVALHIAEALEYCT---SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 158 ---------~~i~~qi~~~L~~LH---~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
...+..++..+.-+. ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 111122222222221 112689999999999999 4 899999987644
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00025 Score=66.15 Aligned_cols=99 Identities=11% Similarity=-0.121 Sum_probs=83.7
Q ss_pred hHHHhhhHHHhhcCHHHHHHHHHHHHhcCC--CCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCC----chHHHHHH
Q 011353 384 NSKKKGDVAFRHKDFRASIECYTQFIDVGT--MVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV----WHMAAYLQ 457 (488)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~----~~~a~~~~ 457 (488)
.....|..+...|++++|++.+.++|..+| . +..++...+.+++++|+.+.|.+.+++..+.+|+ +-.....+
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~L 180 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNL 180 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHH
Confidence 345889999999999999999999999997 6 8999999999999999999999999999999993 22333444
Q ss_pred --HHHHHHCC--CHHHHHHHHHHHHccccc
Q 011353 458 --AAALFALG--KENEAQAALREASILENK 483 (488)
Q Consensus 458 --g~~~~~~~--~~~~A~~~~~~al~ld~~ 483 (488)
|.+....| ++.+|...|+++.+..|+
T Consensus 181 aea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 181 AESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 54466666 999999999999877664
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00039 Score=60.58 Aligned_cols=141 Identities=12% Similarity=0.020 Sum_probs=90.3
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCccccCCC
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 217 (488)
.||.+.|.. .+.+++++++|.++.|.+.+|.-+-.+..-..+=+-|..|++..+|.|.+.+ +.+ ......
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~~ 102 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEPP 102 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-ccc--------cccccC
Confidence 378898865 3568999999999999999987762210111223446889999999888874 111 012335
Q ss_pred CCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHhccC--
Q 011353 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY-- 295 (488)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~-- 295 (488)
+.+||... ...+.+.-|||||+++|.-+-=..|... +...++.|.+||..|...
T Consensus 103 ~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e-----------------------E~eLS~~LE~LL~~Mt~~~~ 158 (229)
T 2yle_A 103 PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE-----------------------ERELSPPLEQLIDHMANTVE 158 (229)
T ss_dssp ----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE-----------------------EECCCHHHHHHHHHHTTCCC
T ss_pred CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc-----------------------chhhCHHHHHHHHHHHhccc
Confidence 67888764 3455677899999999998864433211 122456778888888755
Q ss_pred -----------------------CCCCCCChHHHHHHHHh
Q 011353 296 -----------------------EPRERPNPRSLVTALVT 312 (488)
Q Consensus 296 -----------------------~p~~Rps~~~il~~L~~ 312 (488)
.+..|+++++|++.-..
T Consensus 159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~ 198 (229)
T 2yle_A 159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAA 198 (229)
T ss_dssp --------------------CCSCCCCCCSHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccCcCCHHHHHHHHHh
Confidence 34678889888877553
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0005 Score=65.48 Aligned_cols=138 Identities=8% Similarity=-0.025 Sum_probs=73.1
Q ss_pred ccCCCCCCCe-EEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-C-CCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 63 SEHGEKAPNV-VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N-RRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 63 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
..++.|.... +|+....++..+++|....... ..+..|+.++..+. + -.+++++.+..+.+ ++|||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4455554444 6677664466777876543321 22345677777663 2 24667777644333 78999997766
Q ss_pred HHhhhccC---------------------CC---CCCCHHHHH-------H-H------------HHHHHHHHHHh----
Q 011353 140 LAKHLFHW---------------------ET---QPMKWAMRL-------R-V------------ALHIAEALEYC---- 171 (488)
Q Consensus 140 L~~~l~~~---------------------~~---~~l~~~~~~-------~-i------------~~qi~~~L~~L---- 171 (488)
+.+.+... .. ..++..... . + ...+...+..+
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65433210 00 012211100 0 0 00111122222
Q ss_pred --hcCCCcccccccCcceeeCCC----CCeeeecCCCcccc
Q 011353 172 --TSKERALYHDLNAYRIVFDDD----VNPRLSCFGLMKNS 206 (488)
Q Consensus 172 --H~~~~iiH~Dlkp~Nill~~~----~~~kl~DfGla~~~ 206 (488)
+. ..++|+|+.+.|||++.+ +.+.|+||+.+...
T Consensus 179 ~~~~-~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGD-MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSC-CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCC-CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 22 379999999999999864 67899999987544
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00027 Score=68.41 Aligned_cols=138 Identities=14% Similarity=0.154 Sum_probs=84.2
Q ss_pred cccCCCCCCCeEEEEEeC--------CCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEE
Q 011353 62 VSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 132 (488)
+..+..|-...+|++... ++..+.+|+.... ......+.+|..+++.|. +.-.+++++.+.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 345667888999999864 2478999986332 234566779999999884 4445777777653 3999
Q ss_pred ecCCCCCHHhh--------------h---ccCC---CCCCC--HHHHHHHHHHHHH-------------------HHHHh
Q 011353 133 EYMPNDTLAKH--------------L---FHWE---TQPMK--WAMRLRVALHIAE-------------------ALEYC 171 (488)
Q Consensus 133 E~~~~gsL~~~--------------l---~~~~---~~~l~--~~~~~~i~~qi~~-------------------~L~~L 171 (488)
||++|.+|..- | +... .++.. +.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655421 1 1100 11222 4555556554422 12222
Q ss_pred ----hc---CCCcccccccCcceeeCCC----CCeeeecCCCcc
Q 011353 172 ----TS---KERALYHDLNAYRIVFDDD----VNPRLSCFGLMK 204 (488)
Q Consensus 172 ----H~---~~~iiH~Dlkp~Nill~~~----~~~kl~DfGla~ 204 (488)
.. ...++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 21 1258999999999999876 789999998763
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00018 Score=67.55 Aligned_cols=71 Identities=14% Similarity=0.102 Sum_probs=45.0
Q ss_pred cccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEecC-CCCC
Q 011353 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM-PNDT 139 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~-~~gs 139 (488)
+..++.|..+.+|+. ..+++|+....... .....+|+.+++.+. +.-.+++++++ .+.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 566678889999999 46888987643211 112346888888774 32225676654 33347899999 6654
Q ss_pred H
Q 011353 140 L 140 (488)
Q Consensus 140 L 140 (488)
|
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00068 Score=61.89 Aligned_cols=78 Identities=10% Similarity=-0.002 Sum_probs=63.8
Q ss_pred HHHH-hcCCCCCHHHHhhHHHHHHh---c--C------ChHHHHHHHHHhHhhCCC--chHHHHHHHHHHHHC-----CC
Q 011353 406 TQFI-DVGTMVSPTAFARRSLSYLM---S--D------MPQEALNDASQAQVISPV--WHMAAYLQAAALFAL-----GK 466 (488)
Q Consensus 406 ~~ai-~~~p~~~~~~~~~~~~~~~~---~--~------~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~~~~-----~~ 466 (488)
.+++ +.+|+ +..+++-.|.+... . | ....|...+++|+++||+ +..+|..+|..|... |+
T Consensus 141 ~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd 219 (301)
T 3u64_A 141 HKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGG 219 (301)
T ss_dssp HHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCC
T ss_pred HHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCC
Confidence 4444 55677 78887777776654 1 3 367899999999999999 566999999999996 99
Q ss_pred HHHHHHHHHHHHcccccc
Q 011353 467 ENEAQAALREASILENKK 484 (488)
Q Consensus 467 ~~~A~~~~~~al~ld~~~ 484 (488)
.++|.+.|++||+++|..
T Consensus 220 ~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 220 MEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 999999999999999953
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00021 Score=68.01 Aligned_cols=67 Identities=18% Similarity=0.072 Sum_probs=58.7
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHH
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 455 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (488)
..|..+...|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|++|+.++|....-++
T Consensus 282 alal~~l~~gd~d~A~~~l~rAl~Ln~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~ 348 (372)
T 3ly7_A 282 IKAVSALVKGKTDESYQAINTGIDLEMS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYW 348 (372)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHH
Confidence 4555666789999999999999999975 778899999999999999999999999999998864333
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00024 Score=70.17 Aligned_cols=83 Identities=10% Similarity=-0.094 Sum_probs=65.0
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhc-----CCCC--CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhC-----CC
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDV-----GTMV--SPTAFARRSLSYLMSDMPQEALNDASQAQVIS-----PV 449 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-----p~ 449 (488)
+..+.+.|..+..+|+|++|+..|+++|++ -|++ -...++++|.+|..+|++++|+..+++|+++- |+
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~ 408 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGRE 408 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 344557899999999999999999999955 2331 45679999999999999999999999999863 55
Q ss_pred c---hHHHHHHHHHHHHC
Q 011353 450 W---HMAAYLQAAALFAL 464 (488)
Q Consensus 450 ~---~~a~~~~g~~~~~~ 464 (488)
+ .+.+.+++.++..+
T Consensus 409 Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 409 HSLIEDLILLLEECDANI 426 (429)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH
Confidence 5 44555666666543
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00035 Score=68.91 Aligned_cols=70 Identities=9% Similarity=0.026 Sum_probs=59.0
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhc--------CCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhC-----C
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS-----P 448 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-----p 448 (488)
+..+.+.|..+..+|+|++|+..|+++|++ .|+ -+..++|+|.+|..+|+|++|+..|++|+++. |
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~ 418 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGK 418 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCC
Confidence 344458999999999999999999999965 333 46679999999999999999999999999864 6
Q ss_pred CchH
Q 011353 449 VWHM 452 (488)
Q Consensus 449 ~~~~ 452 (488)
+++.
T Consensus 419 ~Hp~ 422 (433)
T 3qww_A 419 DHPY 422 (433)
T ss_dssp TCHH
T ss_pred CChH
Confidence 6644
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00082 Score=53.18 Aligned_cols=77 Identities=10% Similarity=-0.060 Sum_probs=63.6
Q ss_pred HHHhhhHHHhhcCHHH---HHHHHHHHHhcC-CCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 385 SKKKGDVAFRHKDFRA---SIECYTQFIDVG-TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~---A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
..+.|..+.+.++... +|..++..+..+ |.....+++.+|..++++|+|++|...++..|+++|++.+|.--+..+
T Consensus 38 ~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 38 QFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3366666666665555 999999999987 633789999999999999999999999999999999999988766554
Q ss_pred H
Q 011353 461 L 461 (488)
Q Consensus 461 ~ 461 (488)
-
T Consensus 118 ~ 118 (126)
T 1nzn_A 118 D 118 (126)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00067 Score=67.06 Aligned_cols=73 Identities=15% Similarity=0.255 Sum_probs=51.3
Q ss_pred cccCCCCCCCeEEEEEeCC--------CCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEE
Q 011353 62 VSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 132 (488)
+..++.|....||++...+ +..+.+|+..... ....+.+|..++..|. +.-.+++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4556788889999998653 4789999884321 1245668999999884 4334677776642 3899
Q ss_pred ecCCCCCH
Q 011353 133 EYMPNDTL 140 (488)
Q Consensus 133 E~~~~gsL 140 (488)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987444
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00078 Score=65.17 Aligned_cols=74 Identities=14% Similarity=0.213 Sum_probs=45.8
Q ss_pred cccCCCCCCCeEEEEEeCC---------CCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCC-cccEEEEEeeCCeeEEE
Q 011353 62 VSEHGEKAPNVVYKGKLEN---------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLV 131 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv 131 (488)
+..++.|....+|+....+ +..+++|+..... ........|..+++.+...+ ++++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 4567888889999998654 2688889875432 11112357888888884333 55777654 2 2789
Q ss_pred EecCCCCCH
Q 011353 132 AEYMPNDTL 140 (488)
Q Consensus 132 ~E~~~~gsL 140 (488)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999998543
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0023 Score=50.81 Aligned_cols=74 Identities=7% Similarity=-0.099 Sum_probs=50.0
Q ss_pred HhhhHHHhhc---CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 387 KKGDVAFRHK---DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 387 ~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
+.|-.+.+.+ +...+|..++..++.+|....++++.+|..+.++|+|++|.+.++..|+++|++.+|.--+..+
T Consensus 45 ~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 45 NYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 4454554433 4556777777777777743567777777777777777777777777777777777766655444
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00093 Score=53.02 Aligned_cols=88 Identities=8% Similarity=-0.020 Sum_probs=70.2
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCC---hHHHHHHHHHhHhhCC-CchHHHHHHHHHHHHCCCHHHHH
Q 011353 396 KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM---PQEALNDASQAQVISP-VWHMAAYLQAAALFALGKENEAQ 471 (488)
Q Consensus 396 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~~~~~~A~ 471 (488)
.+.+...+.|.+-+ .+......-++.|.++.+..+ ..++|..++..++.+| ...+.+|.+|.+++++|+|++|.
T Consensus 21 eeL~~l~~qy~~E~--~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar 98 (134)
T 3o48_A 21 QQLEILRQQVVSEG--GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAK 98 (134)
T ss_dssp HHHHHHHHHHHHTT--GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHh--CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHH
Confidence 33444455555544 333357888888888888665 4579999999999999 45899999999999999999999
Q ss_pred HHHHHHHccccccc
Q 011353 472 AALREASILENKKS 485 (488)
Q Consensus 472 ~~~~~al~ld~~~~ 485 (488)
++.+..|+++|.+.
T Consensus 99 ~y~d~lL~~eP~N~ 112 (134)
T 3o48_A 99 RYVDTLFEHERNNK 112 (134)
T ss_dssp HHHHHHHTTCTTCH
T ss_pred HHHHHHHhhCCCCH
Confidence 99999999999775
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0016 Score=64.68 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=48.1
Q ss_pred cccCCCCCCCeEEEEEeCC-CCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCC-cccEEEEEeeCCeeEEEEecCCCCC
Q 011353 62 VSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
+..|+.|-...+|++...+ +..+++|+..... .......+|..++..|...+ .+++++.+. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3456778889999999765 4678899875432 11111257899999886444 467887763 2 36999999855
Q ss_pred H
Q 011353 140 L 140 (488)
Q Consensus 140 L 140 (488)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0025 Score=51.19 Aligned_cols=94 Identities=7% Similarity=-0.064 Sum_probs=0.0
Q ss_pred hhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChH---HHHHHHHHhHhhCC-CchHHHHHHHHHHHHC
Q 011353 389 GDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQ---EALNDASQAQVISP-VWHMAAYLQAAALFAL 464 (488)
Q Consensus 389 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~---~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~ 464 (488)
++......+.+...+.|.+-+. +.- ....-++.|.++.+..+.. ++|..++..++-.| ...+.+|.+|.+++++
T Consensus 13 ~~~~l~~eeL~~lr~qY~~E~~-~~v-s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl 90 (144)
T 1y8m_A 13 AYEPLYPQQLEILRQQVVSEGG-PTA-TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKL 90 (144)
T ss_dssp GGCCCCHHHHHHHHHHHHHTTS-TTS-CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTT
T ss_pred hcCCCCHHHHHHHHHHHHHhcc-CCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHh
Q ss_pred CCHHHHHHHHHHHHcccccc
Q 011353 465 GKENEAQAALREASILENKK 484 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld~~~ 484 (488)
|+|++|.++.+..|+++|.+
T Consensus 91 ~~Y~~Ar~y~d~lL~~eP~n 110 (144)
T 1y8m_A 91 GEYSMAKRYVDTLFEHERNN 110 (144)
T ss_dssp TCHHHHHHHHHHHHHTCCCC
T ss_pred hhHHHHHHHHHHHHhcCCCc
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 488 | ||||
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 6e-42 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-41 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-40 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 5e-39 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 8e-39 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-38 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 4e-38 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 3e-37 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 6e-36 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-35 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-35 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 7e-35 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 8e-35 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-34 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-34 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-34 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-33 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 4e-33 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 6e-33 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-32 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 6e-32 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 7e-32 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 8e-32 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-31 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 5e-31 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 6e-31 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-30 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-30 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-30 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 5e-29 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-28 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-28 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 9e-28 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-27 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-26 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 3e-26 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 4e-26 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-25 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-25 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-25 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 8e-25 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 1e-23 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-23 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-23 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-23 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 9e-23 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-22 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 4e-22 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 7e-22 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 6e-21 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 9e-21 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-20 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-19 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-19 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-18 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 7e-18 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-16 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 5e-15 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-14 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 5e-14 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 9e-14 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-06 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 5e-06 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 3e-04 | |
| d1elra_ | 128 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 0.002 |
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (374), Expect = 6e-42
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV GK Q+ +A+K + + +F+EEA+ + L + +L L G C + ++
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM N L +L + L + + EA+EY SK + L+ DL A + +D
Sbjct: 78 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVND 135
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++S FGL + D S+ + ++PPE L + + +S +++FG L+ ++
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
S +P + L ++ + C + ERP + L
Sbjct: 196 SLGKMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251
Query: 307 VTALV 311
++ ++
Sbjct: 252 LSNIL 256
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (369), Expect = 3e-41
Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 12/249 (4%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
+V+ G N+ ++A+K A + F+EEA + +L + +L L G C E LV
Sbjct: 20 LVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E+M + L+ + + L + L + E + Y ++ DL A + +
Sbjct: 79 FEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGE 136
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
+ ++S FG+ + D + S+ + + PE R + +S ++SFG L+ ++
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
S IP + + +I + T + ++ + C + P +RP L
Sbjct: 197 SEGKIPYENRSNSEVVEDIS----TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252
Query: 307 VTALVTLQK 315
+ L + +
Sbjct: 253 LRQLAEIAE 261
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (364), Expect = 2e-40
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 20/251 (7%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-L 130
V G ++AVK A A+ FL EA + QLR+ L LLG E L +
Sbjct: 22 DVMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
V EYM +L +L + L+ +L + EA+EY ++ DL A ++
Sbjct: 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVS 137
Query: 191 DDVNPRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
+D ++S FGL K S + + +T PE LR + + +S ++SFG LL ++ S
Sbjct: 138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 197
Query: 250 HIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
+P + + D C + + C + RP+
Sbjct: 198 RVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFL 248
Query: 305 SLVTALVTLQK 315
L L ++
Sbjct: 249 QLREQLEHIKT 259
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 5e-39
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 22/249 (8%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G ++AVK + + FL EA + QL+++RL L + + ++
Sbjct: 28 EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM N +L L + L +A IAE + + + ++ DL A I+ D
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSD 144
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++ +++ FGL + D + + +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 247 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
+ IP + + D+C E EL +L C + P +RP
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRP 255
Query: 302 NPRSLVTAL 310
L + L
Sbjct: 256 TFDYLRSVL 264
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 140 bits (354), Expect = 8e-39
Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 12/258 (4%)
Query: 72 VVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 32 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
+ E+M L +L Q + + L +A I+ A+EY K ++ DL A +
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVG 149
Query: 191 DDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
++ +++ FGL + + + +T PE L + + +S +++FG LL ++
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305
+ P +DL + L + + ++ L C Q+ P +RP+
Sbjct: 210 ATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 265
Query: 306 LVTALVTLQKDTEVPSHV 323
+ A T+ +++ + V
Sbjct: 266 IHQAFETMFQESSISDEV 283
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 3e-38
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 12/244 (4%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G R+A+K FL+EA+ + +LR+ +L L E + +V
Sbjct: 32 EVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 89
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM +L L + ++ + +A IA + Y ++ DL A I+ +
Sbjct: 90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGE 148
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++ +++ FGL + D + + +T PE GR T +S ++SFG LL +L
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ +P + +R + + + L L +C + EP ERP L
Sbjct: 209 TKGRVPYPG----MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 264
Query: 307 VTAL 310
L
Sbjct: 265 QAFL 268
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 139 bits (350), Expect = 4e-38
Identities = 57/293 (19%), Positives = 113/293 (38%), Gaps = 26/293 (8%)
Query: 44 YSIETLRTATSGFAMENIVSEH------GEKAPNVVYKGKL----ENQFRIAVKRFNRSA 93
++ E A FA E +S G V G L + + +A+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 94 WPDA-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPM 152
R FL EA +GQ + + +L G + +++ E+M N +L
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 153 KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
+ + IA ++Y ++ DL A I+ + ++ ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 213 STN---------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR 263
T + +T PE ++ + T S ++S+G ++ +++S P + ++
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240
Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
++ + D + L +L C Q + RP +V L + ++
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (342), Expect = 3e-37
Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 20/257 (7%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VYKGK + + + F E + + R+ + +G + +V
Sbjct: 23 TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIV 81
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
++ +L HL ET + + +A A+ ++Y +K ++ DL + I +
Sbjct: 82 TQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHE 139
Query: 192 DVNPRLSCFGL--MKNSRDGRSYSTNLAFTP----PEYLRT---GRVTPESVMYSFGTLL 242
D+ ++ FGL +K+ G L+ + PE +R + +S +Y+FG +L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 243 LDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
+L++G+ +I + + R + S + + RL + CL+ +
Sbjct: 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRD 255
Query: 299 ERPNPRSLVTALVTLQK 315
ERP ++ ++ L +
Sbjct: 256 ERPLFPQILASIELLAR 272
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 6e-36
Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 17/260 (6%)
Query: 56 FAMEN--IVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQ 109
+A+E+ I G+ VY + +++F +A+K ++ A Q E
Sbjct: 3 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 62
Query: 110 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
LR+ + L G + L+ EY P T+ + L +A AL
Sbjct: 63 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALS 120
Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTG 227
YC SK R ++ D+ ++ +++ FG ++ R + L + PPE +
Sbjct: 121 YCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 179
Query: 228 RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287
+ ++S G L + L GK ++ R + +E F
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARD 233
Query: 288 LASRCLQYEPRERPNPRSLV 307
L SR L++ P +RP R ++
Sbjct: 234 LISRLLKHNPSQRPMLREVL 253
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (333), Expect = 1e-35
Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 36/265 (13%)
Query: 72 VVYKGKL------ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
+VY+G E + R+A+K N +A R +FL EA + + + LLG +
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 125 GDERLLVAEYMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKER 176
G L++ E M L +L P + +++A IA+ + Y + +
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-K 153
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVT 230
++ DL A + +D ++ FG+ ++ + Y + + PE L+ G T
Sbjct: 154 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 231 PESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285
S ++SFG +L ++ + P L + + + D+C + L
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 264
Query: 286 VRLASRCLQYEPRERPNPRSLVTAL 310
L C QY P+ RP+ +++++
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 2e-35
Identities = 49/277 (17%), Positives = 98/277 (35%), Gaps = 44/277 (15%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
VV+K + +A K + P R Q + E + + + + + G E
Sbjct: 21 VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 80
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
+ E+M +L + L + + + +V++ + + L Y K + ++ D+ I+
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
+ +L FG+ D + S ++ PE L+ + +S ++S G L+++
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 248 GKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT----------------------- 283
G++ IPP A +L Q D+ G
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258
Query: 284 --------------ELVRLASRCLQYEPRERPNPRSL 306
E ++CL P ER + + L
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 7e-35
Identities = 53/256 (20%), Positives = 97/256 (37%), Gaps = 30/256 (11%)
Query: 72 VVYKGKLENQ---FRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V KG + + +AVK A A + L EA + QL N + ++G C E +
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 80
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
+LV E L K+L + + +K + + ++ ++Y ++ DL A
Sbjct: 81 SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARN 137
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFG 239
++ ++S FGL K R +Y + + PE + + + +S ++SFG
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 240 TLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294
L+ + S P S ++ C E+ L + C
Sbjct: 198 VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCWT 248
Query: 295 YEPRERPNPRSLVTAL 310
Y+ RP ++ L
Sbjct: 249 YDVENRPGFAAVELRL 264
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (326), Expect = 8e-35
Identities = 55/271 (20%), Positives = 101/271 (37%), Gaps = 32/271 (11%)
Query: 72 VVYKGKL---ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
V +G + Q +A+K + D + + EA+ + QL N + L+G C + +
Sbjct: 24 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 82
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
+LV E L K L + + + + ++ ++Y K ++ DL A +
Sbjct: 83 LMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNV 140
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGT 240
+ + ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 141 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 200
Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
+ + LS P + I C EL L S C Y
Sbjct: 201 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWIY 251
Query: 296 EPRERPNPRSLVTAL----VTLQKDTEVPSH 322
+ +RP+ ++ + +L E H
Sbjct: 252 KWEDRPDFLTVEQRMRACYYSLASKVEGHHH 282
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 2e-34
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 26/262 (9%)
Query: 72 VVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
VY G L + + AVK NR + QFL E + + + +LLG C +
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 127 ER-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
L+V YM + L ++ ET + L +A+ +++ SK + ++ DL A
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAAR 159
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYS 237
+ D+ +++ FGL ++ D S + + + E L+T + T +S ++S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ---FSSDEGTELVRLASRCLQ 294
FG LL +L++ P D N +T L+G+ L + +C
Sbjct: 220 FGVLLWELMTRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 272
Query: 295 YEPRERPNPRSLVTALVTLQKD 316
+ RP+ LV+ + +
Sbjct: 273 PKAEMRPSFSELVSRISAIFST 294
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 128 bits (324), Expect = 3e-34
Identities = 46/243 (18%), Positives = 84/243 (34%), Gaps = 14/243 (5%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
VY + + N +A+K+ + S + ++E R + +LR+ GC
Sbjct: 30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
LV EY H +P++ V + L Y S ++ D+ A I
Sbjct: 90 AWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNI 146
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLD 244
+ + +L FG S+ + PE + G+ + ++S G ++
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
L K + Q + + G +S CLQ P++RP
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSE 262
Query: 305 SLV 307
L+
Sbjct: 263 VLL 265
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 128 bits (323), Expect = 3e-34
Identities = 59/279 (21%), Positives = 105/279 (37%), Gaps = 50/279 (17%)
Query: 72 VVYKGKLENQFR------IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
V++ + +AVK A D + F EA + + N + LLG C
Sbjct: 28 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87
Query: 125 GDERLLVAEYMPNDTLAKHLFHW----------------------ETQPMKWAMRLRVAL 162
G L+ EYM L + L P+ A +L +A
Sbjct: 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 147
Query: 163 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------L 216
+A + Y + + + ++ DL + +++ +++ FGL +N Y + +
Sbjct: 148 QVAAGMAYLSER-KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 206
Query: 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDS 271
+ PPE + R T ES ++++G +L ++ S P + +RD NI ++
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266
Query: 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
C EL L C P +RP+ S+ L
Sbjct: 267 CPL---------ELYNLMRLCWSKLPADRPSFCSIHRIL 296
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (316), Expect = 1e-33
Identities = 46/255 (18%), Positives = 87/255 (34%), Gaps = 28/255 (10%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
K + + + K + + +A + + E + +L++ + +
Sbjct: 19 RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT 78
Query: 129 LL--VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYH---- 180
L V EY LA + E Q + LRV + AL+ C + +
Sbjct: 79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 138
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMY 236
DL + D N +L FGL + S++ TP PE + +S ++
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 198
Query: 237 SFGTLLLDLLSGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292
S G LL +L + IR+ + + + EL + +R
Sbjct: 199 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD---------ELNEIITRM 249
Query: 293 LQYEPRERPNPRSLV 307
L + RP+ ++
Sbjct: 250 LNLKDYHRPSVEEIL 264
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 4e-33
Identities = 54/270 (20%), Positives = 104/270 (38%), Gaps = 33/270 (12%)
Query: 72 VVYKGKLEN---QFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRR-LANLLGCCCEGD 126
V K +++ + A+KR A D R F E + +L + + NLLG C
Sbjct: 25 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84
Query: 127 ERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCT 172
L EY P+ L L + + L A +A ++Y +
Sbjct: 85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144
Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRV 229
K + ++ DL A I+ ++ +++ FGL + + + + E L
Sbjct: 145 QK-QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203
Query: 230 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QFSSDEGTELV 286
T S ++S+G LL +++S P L + +G + + E+
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGGTPY-------CGMTCAELYEKLPQGYRLEKPLNCDDEVY 256
Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKD 316
L +C + +P ERP+ ++ +L + ++
Sbjct: 257 DLMRQCWREKPYERPSFAQILVSLNRMLEE 286
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 6e-33
Identities = 48/259 (18%), Positives = 101/259 (38%), Gaps = 19/259 (7%)
Query: 72 VVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG + + +A+K + P A ++ L+EA + + N + LLG C
Sbjct: 24 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
+L+ + MP L + + L + IA+ + Y + R ++ DL A
Sbjct: 84 TVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAAR 140
Query: 186 RIVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFG 239
++ + +++ FGL K + + ++ E + T +S ++S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
+ +L++ P D I I ++ + ++ + +C +
Sbjct: 201 VTVWELMTFGSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256
Query: 300 RPNPRSLVTALVTLQKDTE 318
RP R L+ + +D +
Sbjct: 257 RPKFRELIIEFSKMARDPQ 275
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (311), Expect = 1e-32
Identities = 44/256 (17%), Positives = 90/256 (35%), Gaps = 15/256 (5%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
I+ E G+ A VYK + E A K + + + ++ E + + + LL
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
+ ++ E+ + + E +P+ + V +AL Y + ++
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN-KIIH 133
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST----NLAFTPPEYLRT-----GRVT 230
DL A I+F D + +L+ FG+ + + PE +
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 231 PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
++ ++S G L+++ + PP H L+ +R + S +
Sbjct: 194 YKADVWSLGITLIEMAEIE--PPHHELNPMRVLL-KIAKSEPPTLAQPSRWSSNFKDFLK 250
Query: 291 RCLQYEPRERPNPRSL 306
+CL+ R L
Sbjct: 251 KCLEKNVDARWTTSQL 266
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (307), Expect = 6e-32
Identities = 54/274 (19%), Positives = 99/274 (36%), Gaps = 39/274 (14%)
Query: 72 VVYKG------KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCC 123
V K ++AVK A R+ + E + + QL + + NLLG C
Sbjct: 52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111
Query: 124 EGDERLLVAEYMPNDTLAKHLF---------------------HWETQPMKWAMRLRVAL 162
L+ EY L +L + + + L A
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171
Query: 163 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------L 216
+A+ +E+ K ++ DL A ++ ++ FGL ++ +Y +
Sbjct: 172 QVAKGMEFLEFK-SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV 230
Query: 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276
+ PE L G T +S ++S+G LL ++ S P + D N L + +
Sbjct: 231 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKMD 287
Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
E+ + C ++ R+RP+ +L + L
Sbjct: 288 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 7e-32
Identities = 49/244 (20%), Positives = 92/244 (37%), Gaps = 20/244 (8%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VY + +A+++ N P + E + + +N + N L GDE +
Sbjct: 35 TVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
V EY+ +L + M V +ALE+ S + ++ D+ + I+
Sbjct: 95 VMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 150
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
D + +L+ FG +S + + TP PE + P+ ++S G + ++++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 247 SGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
G+ P AL LI L Q +RCL + +R +
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPEL-------QNPEKLSAIFRDFLNRCLDMDVEKRGS 263
Query: 303 PRSL 306
+ L
Sbjct: 264 AKEL 267
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (303), Expect = 8e-32
Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 22/278 (7%)
Query: 54 SGFAMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWPDAR-QFLEEARAV 107
S + ++ G VYKG L+ + +A+K R FL EA +
Sbjct: 7 SCVTRQKVI---GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 63
Query: 108 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 167
GQ + + L G + +++ EYM N + + + IA
Sbjct: 64 GQFSHHNIIRLEGVISKYKPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAG 122
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTP 220
++Y + ++ DL A I+ + ++ ++S FGL + D + + +T
Sbjct: 123 MKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181
Query: 221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280
PE + + T S ++SFG ++ ++++ P + + + + D
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMD 237
Query: 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ + +L +C Q E RP +V+ L L + +
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 275
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 1e-31
Identities = 51/269 (18%), Positives = 94/269 (34%), Gaps = 34/269 (12%)
Query: 72 VVYKGKLENQFR------IAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCC 123
V + + +AVK SA R+ + E + + L N + NLLG C
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 124 EGDERLLVAEYMPNDTLAKHLFHW----------------ETQPMKWAMRLRVALHIAEA 167
G L++ EY L L + + L + +A+
Sbjct: 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPP 221
+ + SK ++ DL A I+ ++ FGL ++ ++ +Y + + P
Sbjct: 158 MAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
E + T ES ++S+G L +L S P + D +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG---MPVDSKFYKMIKEGFRMLSPEHA 273
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTAL 310
E+ + C +P +RP + +V +
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 5e-31
Identities = 42/288 (14%), Positives = 91/288 (31%), Gaps = 50/288 (17%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEA--RAVGQLRNRRLANLLGCCCEGD--- 126
V++GK + +AVK F+ + R + EA LR+ + + + +
Sbjct: 18 EVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73
Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-------TSKERAL 178
+ LV++Y + +L +L + +++AL A L + K
Sbjct: 74 TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130
Query: 179 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY----STNLAFTP----PEYLRT---- 226
+ DL + I+ + ++ GL + T PE L
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190
Query: 227 --GRVTPESVMYSFGTLLLDLLSGKHIPPSH---------------ALDLIRDRNIQTLT 269
+ +Y+ G + ++ I H +++ +R +
Sbjct: 191 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 250
Query: 270 DSCLEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
+ ++ S E + ++ C R + L L +
Sbjct: 251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 120 bits (302), Expect = 6e-31
Identities = 45/241 (18%), Positives = 77/241 (31%), Gaps = 10/241 (4%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VV++ A K D +E + + LR+ L NL + +E ++
Sbjct: 41 VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
+ E+M L + + E M + + + L + ++ DL I+F
Sbjct: 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFT 158
Query: 191 DDVNPR--LSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
+ L FGL + +S F PE V + M+S G L L
Sbjct: 159 TKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305
LSG P + D ++ S + + L +P R
Sbjct: 219 LSGL--SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 276
Query: 306 L 306
Sbjct: 277 A 277
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 1e-30
Identities = 40/240 (16%), Positives = 73/240 (30%), Gaps = 15/240 (6%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
V + +AVK + D + +E L + + G EG+ +
Sbjct: 20 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
L EY L + M R + + Y + D+ ++
Sbjct: 80 LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLL 136
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV-MYSFGTLL 242
D+ N ++S FGL R L + PE L+ E V ++S G +L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
+L+G+ + + + + L+ + L P R
Sbjct: 197 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH---KILVENPSARIT 253
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 1e-30
Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 27/263 (10%)
Query: 72 VVYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
V++G +A+K R+ FL+EA + Q + + L+G E +
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
++ E L + + A + A ++ AL Y SK R ++ D+ A
Sbjct: 81 PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARN 138
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEY-----LRTGRVTPESVMYSFGTL 241
++ + +L FGL + D Y + P ++ + R T S ++ FG
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 242 LLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 249
Query: 297 PRERPNPRSLVTALVTLQKDTEV 319
P RP L L T+ ++ +
Sbjct: 250 PSRRPRFTELKAQLSTILEEEKA 272
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (292), Expect = 3e-30
Identities = 45/247 (18%), Positives = 90/247 (36%), Gaps = 17/247 (6%)
Query: 72 VVYKGKL-ENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
VYKG E +A + ++F EEA + L++ + +
Sbjct: 24 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 83
Query: 129 ----LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
+LV E M + TL +L + MK + I + L++ ++ + H DL
Sbjct: 84 KKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141
Query: 184 AYRIVFDD-DVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGT 240
I + ++ GL R + + F PE + +Y+FG
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGM 200
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+L++ + ++ P S + + + +T F E+ + C++ ER
Sbjct: 201 CMLEMATSEY-PYSECQN--AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 257
Query: 301 PNPRSLV 307
+ + L+
Sbjct: 258 YSIKDLL 264
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 3e-30
Identities = 51/257 (19%), Positives = 91/257 (35%), Gaps = 20/257 (7%)
Query: 72 VVYKGKLE----NQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCE 124
VV +G+ + +AVK F+ E A+ L +R L L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
+ +V E P +L R A+ +AE + Y SK ++ DL A
Sbjct: 83 PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYS 237
++ ++ FGLM+ + A+ PE L+T + S +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
FG L ++ + P L + + + D ++ + +C ++P
Sbjct: 200 FGVTLWEMFTYGQEPWI---GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 256
Query: 298 RERPNPRSLVTALVTLQ 314
+RP +L L+ Q
Sbjct: 257 EDRPTFVALRDFLLEAQ 273
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 115 bits (288), Expect = 5e-29
Identities = 49/244 (20%), Positives = 83/244 (34%), Gaps = 16/244 (6%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VV++ K N D E + QL + +L NL + E +L
Sbjct: 44 VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
+ E++ L + E M A + E L++ ++ D+ I+ +
Sbjct: 104 ILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCE 161
Query: 191 DDVNPR--LSCFGLMKNSRDGRS---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
+ FGL + F PE + V + M++ G L L
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221
Query: 246 LSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFS--SDEGTELVRLASRCLQYEPRERPN 302
LSG L+ + +N++ E FS S E + ++ LQ EPR+R
Sbjct: 222 LSGLSPFAGEDDLETL--QNVKRCDWEFDEDAFSSVSPEAKDFIK---NLLQKEPRKRLT 276
Query: 303 PRSL 306
Sbjct: 277 VHDA 280
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (280), Expect = 2e-28
Identities = 40/255 (15%), Positives = 80/255 (31%), Gaps = 23/255 (9%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
V + L A+K + E + +L + L + ++
Sbjct: 23 TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK 82
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
Y N L K++ I ALEY K ++ DL I
Sbjct: 83 LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENI 139
Query: 188 VFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTL 241
+ ++D++ +++ FG K S+ + PE L S +++ G +
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199
Query: 242 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLASRCLQYEPRE 299
+ L++G PP R N + ++ ++ E + L + L + +
Sbjct: 200 IYQLVAGL--PP------FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 251
Query: 300 RPNPRSLVTALVTLQ 314
R +
Sbjct: 252 RLGCEEMEGYGPLKA 266
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 111 bits (278), Expect = 4e-28
Identities = 38/242 (15%), Positives = 73/242 (30%), Gaps = 11/242 (4%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
V + Q +A+K + A E + ++++ + L G
Sbjct: 24 EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA--LYHDLNAYRI 187
L+ + + L + E R+ + +A++Y N
Sbjct: 84 LIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 141
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
D+D +S FGL K G ST + PE L + +S G +
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
LL G PP + + + + + + D ++ +P +R
Sbjct: 202 LLCGY--PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 259
Query: 305 SL 306
Sbjct: 260 QA 261
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 109 bits (274), Expect = 9e-28
Identities = 45/245 (18%), Positives = 79/245 (32%), Gaps = 20/245 (8%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCE--- 124
V+ + L +AVK D +F EA+ L + + +
Sbjct: 22 EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 81
Query: 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183
G +V EY+ TL + PM + V +AL + ++ D+
Sbjct: 82 AGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN-GIIHRDVK 138
Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL-------AFTPPEYLRTGRVTPESVMY 236
I+ ++ FG+ + D + T + PE R V S +Y
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198
Query: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
S G +L ++L+G+ PP + D +L + + L
Sbjct: 199 SLGCVLYEVLTGE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256
Query: 297 PRERP 301
P R
Sbjct: 257 PENRY 261
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (274), Expect = 2e-27
Identities = 40/258 (15%), Positives = 92/258 (35%), Gaps = 23/258 (8%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
I + G +V++ ++ K D +E + R+R + +L
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLH 67
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
+E +++ E++ + + + + + + + EAL++ S +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSH-NIGH 125
Query: 180 HDLNAYRIVFDDDVNPR--LSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESV 234
D+ I++ + + FG + + G ++ + PE + V+ +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 235 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT------ELVRL 288
M+S GTL+ LLSG + Q + ++ + +++ DE E +
Sbjct: 186 MWSLGTLVYVLLSGIN--------PFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF 237
Query: 289 ASRCLQYEPRERPNPRSL 306
R L E + R
Sbjct: 238 VDRLLVKERKSRMTASEA 255
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 1e-26
Identities = 48/271 (17%), Positives = 92/271 (33%), Gaps = 33/271 (12%)
Query: 72 VVYKG------KLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCC- 123
V + K +AVK A + R + E + + + + L C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 124 -EGDERLLVAEYMPNDTLAKHLFH--------------WETQPMKWAMRLRVALHIAEAL 168
G +++ E+ L+ +L + + + +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPE 222
E+ S+ + ++ DL A I+ + ++ FGL ++ Y L + PE
Sbjct: 148 EFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282
+ T +S ++SFG LL ++ S P + + D +
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKI--DEEFCRRLKEGTRMRAPDYTT 263
Query: 283 TELVRLASRCLQYEPRERPNPRSLVTALVTL 313
E+ + C EP +RP LV L L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (264), Expect = 3e-26
Identities = 52/269 (19%), Positives = 98/269 (36%), Gaps = 35/269 (13%)
Query: 72 VVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGC 121
V + ++AVK A D + E + + +++ + NLLG
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEA 167
C + ++ EY L ++L + + + A +A
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPP 221
+EY SK + ++ DL A ++ +D +++ FGL ++ Y + + P
Sbjct: 148 MEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
E L T +S ++SFG LL ++ + P + + + L S+
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV---EELFKLLKEGHRMDKPSNC 262
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTAL 310
EL + C P +RP + LV L
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (264), Expect = 4e-26
Identities = 44/258 (17%), Positives = 94/258 (36%), Gaps = 20/258 (7%)
Query: 56 FAMEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQ---FLEEARAVGQ 109
+++++ I+ G + V+ + N A+K + +Q +E +
Sbjct: 1 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 60
Query: 110 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
+ + + + G + + ++ +Y+ L ++Q + A + ALE
Sbjct: 61 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALE 118
Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGR 228
Y SK +Y DL I+ D + + +++ FG K D + + PE + T
Sbjct: 119 YLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP 177
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELV 286
+SFG L+ ++L+G D N + L + ++
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDVK 229
Query: 287 RLASRCLQYEPRERPNPR 304
L SR + + +R
Sbjct: 230 DLLSRLITRDLSQRLGNL 247
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 2e-25
Identities = 44/253 (17%), Positives = 82/253 (32%), Gaps = 27/253 (10%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQ------FLEEARAVGQLRNRRLANLLGCCCE 124
VV K + + A K + +R+ E + ++++ + L
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
+ +L+ E + L E + + I + Y S + A + DL
Sbjct: 85 KTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKP 141
Query: 185 YRIVFDDDVNPR----LSCFGLMKNSRDGRSYSTNL---AFTPPEYLRTGRVTPESVMYS 237
I+ D P+ + FGL G + F PE + + E+ M+S
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 238 FGTLLLDLLSGKHIPPSH----ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G + LLSG L + N + E ++ S+ R L
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLANVSAVNYE------FEDEYFSNTSALAKDFIRRLL 255
Query: 294 QYEPRERPNPRSL 306
+P++R +
Sbjct: 256 VKDPKKRMTIQDS 268
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 2e-25
Identities = 45/242 (18%), Positives = 81/242 (33%), Gaps = 22/242 (9%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVG-QLRNRRLANLLGCCCEGD 126
V+ + + A+K + D + E R + + L ++ +
Sbjct: 17 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
V EY+ L H+ + A I L++ SK +Y DL
Sbjct: 77 NLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDN 133
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT----PPEYLRTGRVTPESVMYSFGTLL 242
I+ D D + +++ FG+ K + G + + T PE L + +SFG LL
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193
Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG--TELVRLASRCLQYEPRER 300
++L G+ ++ + L S E L + EP +R
Sbjct: 194 YEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245
Query: 301 PN 302
Sbjct: 246 LG 247
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 104 bits (261), Expect = 2e-25
Identities = 45/240 (18%), Positives = 78/240 (32%), Gaps = 16/240 (6%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPD------ARQFLEEARAVGQLRNRRLANLLGCCCE 124
VY + + A+K ++ A V + +
Sbjct: 19 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 78
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
D+ + + M L HL A A I LE+ ++ +Y DL
Sbjct: 79 PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKP 135
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTGR-VTPESVMYSFGTL 241
I+ D+ + R+S GL + + +++ + PE L+ G + +S G +
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195
Query: 242 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
L LL G H + + TLT + S E L+ LQ + R
Sbjct: 196 LFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE---GLLQRDVNRRL 252
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 101 bits (253), Expect = 8e-25
Identities = 44/255 (17%), Positives = 79/255 (30%), Gaps = 25/255 (9%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA---------RQFLEEARAVGQLRN-RRLANLLG 120
VV + AVK + + L+E + ++ + L
Sbjct: 18 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
LV + M L +L E + ++ + E + ++
Sbjct: 78 TYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKL-NIVHR 134
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRV------TP 231
DL I+ DDD+N +L+ FG G ++ PE +
Sbjct: 135 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194
Query: 232 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291
E M+S G ++ LL+G PP + + + D + L SR
Sbjct: 195 EVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 292 CLQYEPRERPNPRSL 306
L +P++R
Sbjct: 253 FLVVQPQKRYTAEEA 267
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.2 bits (244), Expect = 1e-23
Identities = 48/248 (19%), Positives = 90/248 (36%), Gaps = 27/248 (10%)
Query: 72 VVYKGK-LENQFRIAVKRFNRS------AWPDARQFLEEARAVGQLRN--RRLANLLGCC 122
VY G + + +A+K + P+ + E + ++ + + LL
Sbjct: 19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78
Query: 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
D +L+ E E ++ + + EA+ +C + L+ D+
Sbjct: 79 ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDI 136
Query: 183 NAYRIVFD-DDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTGRVTPESV-MYSF 238
I+ D + +L FG +D + ++PPE++R R S ++S
Sbjct: 137 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
G LL D++ G P H ++IR + F +E L CL P
Sbjct: 197 GILLYDMVCGDI-PFEHDEEIIRGQVF-----------FRQRVSSECQHLIRWCLALRPS 244
Query: 299 ERPNPRSL 306
+RP +
Sbjct: 245 DRPTFEEI 252
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 98.0 bits (243), Expect = 2e-23
Identities = 38/257 (14%), Positives = 76/257 (29%), Gaps = 23/257 (8%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERL 129
+Y G + +A+K Q E++ ++ + C EGD +
Sbjct: 22 DIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
+V E + LF++ ++ L +A + +EY SK ++ D+ +
Sbjct: 80 MVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLM 136
Query: 190 ---DDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPESVM 235
+ FGL K RD R++ + + +
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196
Query: 236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--SCLEGQFSSDEGTELVRLASRCL 293
S G +L+ G R + + S +E + C
Sbjct: 197 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR 256
Query: 294 QYEPRERPNPRSLVTAL 310
++P+ L
Sbjct: 257 SLRFDDKPDYSYLRQLF 273
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.6 bits (242), Expect = 3e-23
Identities = 47/268 (17%), Positives = 82/268 (30%), Gaps = 36/268 (13%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA-----RQFLEEARAVGQLRNRRLANLLGCCCEG 125
VYK + +A+K+ +A R L E + + +L + + LL
Sbjct: 13 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
LV ++M D + + + + L + LEY + DL
Sbjct: 73 SNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPN 129
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTGRVTPESVMYSFGT 240
++ D++ +L+ FGL K+ T+ T P M++ G
Sbjct: 130 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 189
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE----------------------GQFS 278
+L +LL P + R +TL E
Sbjct: 190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249
Query: 279 SDEGTELVRLASRCLQYEPRERPNPRSL 306
S G +L+ L + P R
Sbjct: 250 SAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 96.4 bits (239), Expect = 7e-23
Identities = 42/284 (14%), Positives = 83/284 (29%), Gaps = 32/284 (11%)
Query: 60 NIVSEH-------GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR 111
N+V H GE + V+++G L N ++A+K R + DA Q +E R L
Sbjct: 1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA 58
Query: 112 NRR-LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY 170
+ N+ EG +LV + + L + A + ++
Sbjct: 59 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQS 116
Query: 171 CTSKERALYHDLNAYRIVFDDDVNPRLSC-----FGLMKNSRDGRSYSTN---------- 215
K +Y D+ + + + FG++K RD +
Sbjct: 117 IHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175
Query: 216 -LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP--SHALDLIRDRNIQTLTDSC 272
+ + + + G + + L G A + + I S
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235
Query: 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
+ + E + P+ L + +
Sbjct: 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 95.7 bits (237), Expect = 9e-23
Identities = 42/281 (14%), Positives = 95/281 (33%), Gaps = 35/281 (12%)
Query: 58 MEN--IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNR 113
ME + + GE VVYK + A+K+ + + E + +L++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS 173
+ L +LV E++ D L ++ L + + YC
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PEYLRTGR 228
+ R L+ DL ++ + + +++ FGL + T+ T + + +
Sbjct: 119 R-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPS-----------------------HALDLIRDRNI 265
+ ++S G + ++++G + P + +L +
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
T+ + F + L S+ L+ +P +R +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.4 bits (239), Expect = 1e-22
Identities = 50/271 (18%), Positives = 85/271 (31%), Gaps = 41/271 (15%)
Query: 72 VVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER-- 128
VVY+ KL ++ +A+K+ + D R E + + +L + + L E+
Sbjct: 35 VVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 90
Query: 129 ----LLVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183
LV +Y+P + Q + + +L Y S + D+
Sbjct: 91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIK 149
Query: 184 AYRIVFDDD-VNPRLSCFGLMKNSRDGRSYSTNLAFT----PPEYLRTGRVTPESVMYSF 238
++ D D +L FG K G + + P T ++S
Sbjct: 150 PQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSA 209
Query: 239 GTLLLDLLSGKHI----PPSHALDLI-------------------RDRNIQTLTDSCLEG 275
G +L +LL G+ I L I + +
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
F E + L SR L+Y P R P
Sbjct: 270 VFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.2 bits (233), Expect = 4e-22
Identities = 51/282 (18%), Positives = 103/282 (36%), Gaps = 35/282 (12%)
Query: 58 MEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRN 112
MEN V + GE VVYK + +A+K+ + + E + +L +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
+ LL ++ LV E++ D L K + + + + + L +C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTG 227
S R L+ DL ++ + + +L+ FGL + T+ T P L
Sbjct: 120 SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 228 RVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRD--RNIQTLTDSCLEGQFSSDE--- 281
+ ++S G + ++++ + + P +D + R + T + G S +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 282 -----------------GTELVRLASRCLQYEPRERPNPRSL 306
+ L S+ L Y+P +R + ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.5 bits (234), Expect = 7e-22
Identities = 39/271 (14%), Positives = 93/271 (34%), Gaps = 37/271 (13%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
+V N+ R+A+K+ + ++ L E + + + R+ + +
Sbjct: 23 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 82
Query: 130 LVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 188
+ Y+ + L+ +TQ + I L+Y S L+ DL ++
Sbjct: 83 MKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLL 141
Query: 189 FDDDVNPRLSCFGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESV-MYSFGT 240
+ + ++ FGL + + ++ + PE + + +S+ ++S G
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201
Query: 241 LLLDLLSGKHI-------------------PPSHALDLIRDRNIQTLTDSCLEG------ 275
+L ++LS + I P L+ I + + S
Sbjct: 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 261
Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ + ++ + L + L + P +R
Sbjct: 262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.4 bits (226), Expect = 6e-21
Identities = 45/242 (18%), Positives = 82/242 (33%), Gaps = 17/242 (7%)
Query: 72 VVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
V + A+K + A + + E+R + R+ L L D
Sbjct: 20 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
V EY L HL + A I ALEY S+ +Y D+ +
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSR-DVVYRDIKLENL 136
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
+ D D + +++ FGL K + TP PE L + G ++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 244 DLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303
+++ G+ + + + + + E +F E L + L+ +P++R
Sbjct: 197 EMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 250
Query: 304 RS 305
Sbjct: 251 GP 252
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.9 bits (225), Expect = 9e-21
Identities = 42/249 (16%), Positives = 77/249 (30%), Gaps = 20/249 (8%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCC----CEG 125
V + Q + A+K D + E + + + ++
Sbjct: 27 KVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 81
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
L+V E + L + Q + I EA++Y S + D+
Sbjct: 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPE 140
Query: 186 RIVFDDDVNP---RLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESVMYSFG 239
+++ +L+ FG K + S +T + PE L + M+S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--GQFSSDEGTELVRLASRCLQYEP 297
++ LL G S+ I + E S+ E+ L L+ EP
Sbjct: 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP 260
Query: 298 RERPNPRSL 306
+R
Sbjct: 261 TQRMTITEF 269
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.3 bits (223), Expect = 2e-20
Identities = 37/271 (13%), Positives = 88/271 (32%), Gaps = 41/271 (15%)
Query: 72 VVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-- 126
V ++A+K+ R + A++ E R + +R+ + LL +
Sbjct: 33 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL 92
Query: 127 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
+ LV +M D + + + + + + L Y + ++ DL
Sbjct: 93 DDFTDFYLVMPFMGTD----LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDL 147
Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--TPPEYLRTGRVTPESVMYSFGT 240
+ ++D ++ FGL + + + + P L R T ++S G
Sbjct: 148 KPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGC 207
Query: 241 LLLDLLSGKHI-------------------PPSHALDLIRDRNIQTLTDSCLE------G 275
++ ++++GK + PP+ + ++ + E
Sbjct: 208 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA 267
Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
++ V L + L + +R
Sbjct: 268 SILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.9 bits (214), Expect = 2e-19
Identities = 41/281 (14%), Positives = 85/281 (30%), Gaps = 36/281 (12%)
Query: 61 IVSEHGEKAPNVVYKGK--LENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNR 113
V+E GE A V+K + +A+KR + + + R + +
Sbjct: 11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLA----KHLFHWETQPMKWAMRLRVALHIAEALE 169
+ L C + + + +L + + + L+
Sbjct: 71 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 130
Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRT 226
+ S R ++ DL I+ +L+ FGL + + ++ L + PE L
Sbjct: 131 FLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 189
Query: 227 GRVTPESVMYSFGTLLLDLLSGKHI---------------------PPSHALDLIRDRNI 265
++S G + ++ K + D+ R
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249
Query: 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ +F +D L +CL + P +R + S
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.8 bits (211), Expect = 3e-19
Identities = 40/283 (14%), Positives = 80/283 (28%), Gaps = 37/283 (13%)
Query: 58 MEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRN 112
M+ + + GE V+K K E +A+KR + L E + +L++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
+ + L + LV E+ D F + + + + L +C
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTG 227
S+ L+ DL ++ + + +L+ FGL + + T P
Sbjct: 119 SR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 228 RVTPESVMYSFGTLLLDLLSGKHIP------------------------PSHALDLIRDR 263
+ M+S G + +L + L +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237
Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ L L+ P +R +
Sbjct: 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 83.7 bits (206), Expect = 3e-18
Identities = 45/236 (19%), Positives = 76/236 (32%), Gaps = 14/236 (5%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQ---FLEEARAVGQLRNRRLANLLGCCCEGDE 127
V K E+ A+K ++ +Q L E R + + L L +
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
+V EY+ + HL A I EY S +Y DL +
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENL 172
Query: 188 VFDDDVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
+ D +++ FG K + + PE + + ++ G L+ ++
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
+G PP A I+ FSS +L L LQ + +R
Sbjct: 233 AGY--PPFFADQPIQIYEKIVSGKVRFPSHFSS----DLKDLLRNLLQVDLTKRFG 282
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.2 bits (202), Expect = 7e-18
Identities = 45/292 (15%), Positives = 95/292 (32%), Gaps = 49/292 (16%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLAN 117
+++ G+ V+K + + ++A+K+ + L E + + L++ + N
Sbjct: 14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73
Query: 118 LLGCCCEGDER--------LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
L+ C LV ++ +D L + RV + L
Sbjct: 74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLA--GLLSNVLVKFTLSEIKRVMQMLLNGLY 131
Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPP 221
Y + L+ D+ A ++ D +L+ FGL + ++ N L + PP
Sbjct: 132 YIHRN-KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190
Query: 222 EYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPS----HALDLIRD-------------- 262
E L R P ++ G ++ ++ + I H L LI
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250
Query: 263 --------RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
++ + + + L + L +P +R +
Sbjct: 251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.2 bits (189), Expect = 3e-16
Identities = 46/262 (17%), Positives = 84/262 (32%), Gaps = 23/262 (8%)
Query: 58 MEN--IVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWPD----ARQFLEEARAV 107
+EN ++ G A V+ + + A+K ++ E + +
Sbjct: 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82
Query: 108 GQLRNRRLANLLGCCCEGDERLLVA-EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE 166
+R L + + +L + +Y+ L HL E I
Sbjct: 83 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQI--YVGEIVL 140
Query: 167 ALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEY--- 223
ALE+ +Y D+ I+ D + + L+ FGL K + EY
Sbjct: 141 ALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 199
Query: 224 --LRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279
+R G +S G L+ +LL+G P + + E +
Sbjct: 200 DIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQ 257
Query: 280 DEGTELVRLASRCLQYEPRERP 301
+ L R L +P++R
Sbjct: 258 EMSALAKDLIQRLLMKDPKKRL 279
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.8 bits (180), Expect = 5e-15
Identities = 42/278 (15%), Positives = 84/278 (30%), Gaps = 33/278 (11%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLAN 117
+S G A V + R+AVK+ +R + A++ E R + +++ +
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKE 175
LL + L + + Q + + I L+Y S
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTPPEYLRTGRVTPES 233
++ DL + ++D ++ FGL + +T P L
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 234 VMYSFGTLLLDLLSGKH-------------------IPPSHALDLIRDRNIQTLTDSCLE 274
++S G ++ +LL+G+ P + L I + + S +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 260
Query: 275 ------GQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
V L + L + +R
Sbjct: 261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 71.0 bits (173), Expect = 4e-14
Identities = 42/276 (15%), Positives = 87/276 (31%), Gaps = 50/276 (18%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERL 129
V++ + N ++ VK ++ E + + LR + L + R
Sbjct: 50 EVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106
Query: 130 --LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
LV E++ N + Q + I +AL+YC S ++ D+ + +
Sbjct: 107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNV 160
Query: 188 VFD-DDVNPRLSCFGLMKNSRDGRSYS----TNLAFTPPEYLRTGRVTPESVMYSFGTLL 242
+ D + RL +GL + G+ Y+ + P + M+S G +L
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
Query: 243 LDLLSGKH--------------------------------IPPSHALDLIRDRNIQTLTD 270
++ K I + I R+ + +
Sbjct: 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280
Query: 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ + E + + L+Y+ + R R
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 71.2 bits (173), Expect = 5e-14
Identities = 42/299 (14%), Positives = 91/299 (30%), Gaps = 65/299 (21%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
V+ K + N +A+K +E + + ++ + +LL
Sbjct: 28 TVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86
Query: 131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKER 176
+ +E + + +++ + L+Y +
Sbjct: 87 DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146
Query: 177 ALYHDLNAYRIVFDDD------VNPRLSCFGLMKNSRDGRSYS-TNLAFTPPEYLRTGRV 229
++ D+ ++ + + +++ G + + S + PE L
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206
Query: 230 TPESVMYSFGTLLLDLLSGKHI-------------------------PPSHALDLIRD-- 262
+ ++S L+ +L++G + PS+ L +
Sbjct: 207 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR 266
Query: 263 ---------RNIQTLTDSCLEG------QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
RNI L LE +FS DE E+ S LQ +PR+R + L
Sbjct: 267 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.4 bits (171), Expect = 9e-14
Identities = 39/294 (13%), Positives = 90/294 (30%), Gaps = 54/294 (18%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLAN 117
+ G A +V +A+K+ +R A++ E + + ++ + +
Sbjct: 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 118 LLGCCC------EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 171
LL E + LV E M + + + + +++
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGIKHL 135
Query: 172 TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGR 228
S ++ DL IV D ++ FGL + + + + PE +
Sbjct: 136 HSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE-------------- 274
++S G ++ +++ K + P ++ I+ L C E
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 275 ----------------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ + + ++ L S+ L +P +R +
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 46.7 bits (110), Expect = 1e-06
Identities = 20/147 (13%), Positives = 35/147 (23%), Gaps = 25/147 (17%)
Query: 72 VVYKGKLENQFRIAVKRFNRSA----------WPDARQFLEEARAVGQLRNRRLANLLGC 121
V+ E VK F A + R L L G
Sbjct: 15 AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74
Query: 122 CC----EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
+ ++ E + E ++ V I E + +
Sbjct: 75 AVPKVYAWEGNAVLMELI---------DAKELYRVRVENPDEVLDMILEEVAKFYHR-GI 124
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMK 204
++ DL+ Y V + + F
Sbjct: 125 VHGDLSQY-NVLVSEEGIWIIDFPQSV 150
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.0 bits (105), Expect = 5e-06
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 445
K++G+ F + + + CY + I + + R+L YL P++AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 446 ISPVWHMAAYLQAAALFALGKENEAQAALREA 477
+ A + + +EA A L+ A
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRA 98
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.4 bits (93), Expect = 3e-04
Identities = 20/131 (15%), Positives = 38/131 (29%), Gaps = 1/131 (0%)
Query: 347 DLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYT 406
L A + L A + + + V + +I+ Y
Sbjct: 202 FLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYR 261
Query: 407 QFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGK 466
+ I++ P A+ + + EA + + A + P + A G
Sbjct: 262 RAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN 320
Query: 467 ENEAQAALREA 477
EA R+A
Sbjct: 321 IEEAVRLYRKA 331
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 128 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.0 bits (82), Expect = 0.002
Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Query: 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALND 439
++ L K+ G+ A++ KDF +++ Y + ++ + T ++ Y +
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCREL 60
Query: 440 ASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 477
+A + A A +G + ++A
Sbjct: 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDA 98
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 488 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.91 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.81 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.78 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.78 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.72 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.71 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.69 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.68 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.67 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.65 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.6 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.6 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.59 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.56 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.53 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.52 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.48 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.46 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.41 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.39 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.38 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.36 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.36 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.33 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.32 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.3 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.27 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.26 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.25 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.19 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.16 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.13 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.04 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.03 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.03 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 98.99 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.95 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.84 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.77 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.76 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.76 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.75 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.72 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.64 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.59 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.58 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.4 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.33 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.2 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.2 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.13 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.09 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 98.09 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.06 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 97.91 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.84 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.81 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.8 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.49 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.41 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.29 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.96 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.95 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 82.22 | |
| d2cfua2 | 505 | Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI | 82.12 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 82.03 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 80.71 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-56 Score=417.23 Aligned_cols=251 Identities=22% Similarity=0.319 Sum_probs=204.8
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
++++++++||+|+||+||+|.+.++..||||+++... ...++|.+|+.++++++|||||+++|+|.+.+..++||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 5678889999999999999998888899999998654 346789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----Cc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~~ 211 (488)
+|+|.+++... ...+++..++.++.||+.||.|||++ +|+||||||+|||+++++.+||+|||+++..... ..
T Consensus 84 ~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~ 161 (263)
T d1sm2a_ 84 HGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161 (263)
T ss_dssp TCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred CCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhcc-ceeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence 99999998653 45689999999999999999999998 9999999999999999999999999999865433 22
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCch-hhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..||+.|+|||++.+..++.++|||||||++|||+|++.||... ....+.... ........|..+++++.+|+.
T Consensus 162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i-----~~~~~~~~p~~~~~~l~~li~ 236 (263)
T d1sm2a_ 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-----STGFRLYKPRLASTHVYQIMN 236 (263)
T ss_dssp ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHH-----HHTCCCCCCTTSCHHHHHHHH
T ss_pred eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHH-----HhcCCCCCccccCHHHHHHHH
Confidence 45789999999999999999999999999999999965555432 221111111 111122234456778999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhhhc
Q 011353 291 RCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.||+.||++|||+++|+++|+.+.+
T Consensus 237 ~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 237 HCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCCHhHCcCHHHHHHHHHHHHh
Confidence 9999999999999999999998864
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.5e-56 Score=421.77 Aligned_cols=255 Identities=21% Similarity=0.331 Sum_probs=216.3
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.+++++.++||+|+||+||+|.+ .+++.||||+++... ...++|.+|+.+|++++|||||+++++|.+.+..+|||||
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 94 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 94 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence 35678889999999999999995 468899999997654 3567899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC----
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~---- 210 (488)
+++|+|.+++.......+++..+..|+.||+.||.|||++ +||||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~-~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~ 173 (287)
T d1opja_ 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173 (287)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC-CcccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence 9999999999876667899999999999999999999998 99999999999999999999999999998765432
Q ss_pred -ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh-hHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 211 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
...+++.|+|||++.+..++.++|||||||++|||+||+.||.... ..... ..+........+..++.++.+|
T Consensus 174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~l 248 (287)
T d1opja_ 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----ELLEKDYRMERPEGCPEKVYEL 248 (287)
T ss_dssp TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTCCCCCCTTCCHHHHHH
T ss_pred ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHH-----HHHhcCCCCCCCccchHHHHHH
Confidence 2246789999999999999999999999999999999877665332 11111 1111112233445567889999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 289 ASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+.+||+.||++|||+.+|++.|+.+.+..
T Consensus 249 i~~cl~~dP~~Rps~~ei~~~L~~~~~~~ 277 (287)
T d1opja_ 249 MRACWQWNPSDRPSFAEIHQAFETMFQES 277 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHTTSSS
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999886543
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-56 Score=419.03 Aligned_cols=245 Identities=18% Similarity=0.246 Sum_probs=209.6
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
+|+++++||+|+||+||+|. ..+|+.||||+++.......+.+.+|+.+|+.++|||||++++++.+.+..+||||||+
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~ 100 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence 58999999999999999999 56799999999986655567789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----Ccc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~~~ 212 (488)
||+|.+++.+ +.+++..+..++.||+.||.|||++ |||||||||+|||++.++++||+|||+++..... ...
T Consensus 101 gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 176 (293)
T d1yhwa1 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (293)
T ss_dssp TCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred CCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence 9999998854 4599999999999999999999999 9999999999999999999999999999875432 345
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
.||+.|+|||++.+..++.++|||||||++|+|+||+.||............... .......+...+.++.+|+.+|
T Consensus 177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~li~~~ 253 (293)
T d1yhwa1 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSAIFRDFLNRC 253 (293)
T ss_dssp CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH---CSCCCSSGGGSCHHHHHHHHHH
T ss_pred ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhC---CCCCCCCcccCCHHHHHHHHHH
Confidence 6899999999999999999999999999999999999998754322111111111 0011123445678899999999
Q ss_pred ccCCCCCCCChHHHHHH
Q 011353 293 LQYEPRERPNPRSLVTA 309 (488)
Q Consensus 293 l~~~p~~Rps~~~il~~ 309 (488)
|+.||.+|||+.++++|
T Consensus 254 L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 254 LDMDVEKRGSAKELLQH 270 (293)
T ss_dssp TCSSTTTSCCHHHHTTC
T ss_pred ccCChhHCcCHHHHhcC
Confidence 99999999999999876
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-56 Score=417.03 Aligned_cols=255 Identities=20% Similarity=0.293 Sum_probs=205.2
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
+++|.+.+.||+|+||+||+|++.+ .||||+++... ....+.|.+|+.+|++++|||||++++++.+ +..+||||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence 4567888999999999999998643 59999997543 2345679999999999999999999998754 56899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+++|+|.+++... ...+++..+..|+.||+.||.|||++ +||||||||+|||++.++.+||+|||+++.....
T Consensus 84 y~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~-~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 84 WCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp CCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred cCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHhcC-CEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 99999999999653 34699999999999999999999998 9999999999999999999999999999765432
Q ss_pred --CccccCCCCCCcccccc---CCCCCCccchhhHHHHHHHHhCCCCCCchhhH-HHhhccccccccccccCCCChHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
....||+.|||||++.+ ..++.++|||||||++|||+||+.||.+.... ............+. ....+..+++
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 240 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD-LSKVRSNCPK 240 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC-GGGSCTTCCH
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc-chhccccchH
Confidence 23468999999999975 34889999999999999999999998653211 11111111111111 1123344667
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
++.+|+.+||+.||.+|||+.+|+++|+.+.+.
T Consensus 241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 241 AMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 899999999999999999999999999998764
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-56 Score=424.14 Aligned_cols=267 Identities=20% Similarity=0.281 Sum_probs=209.0
Q ss_pred cCHHHHHHHhcCC------CcccccccCCCCCCCeEEEEEeC-CC---CEEEEEEcCCCCCc-cHHHHHHHHHHHhccCC
Q 011353 44 YSIETLRTATSGF------AMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSAWP-DARQFLEEARAVGQLRN 112 (488)
Q Consensus 44 ~~~~~~~~~~~~~------~~~~~i~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h 112 (488)
+++++...++.+| +.+++.+.||+|+||+||+|... ++ ..||||++...... ..+.|.+|+.+|++++|
T Consensus 7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H 86 (299)
T d1jpaa_ 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 86 (299)
T ss_dssp GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence 3444555555544 45667788999999999999953 33 36899998765433 35679999999999999
Q ss_pred CCcccEEEEEeeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 113 ~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
||||+++|++.+.+..++|||||++|+|.+++... .+.+++..+..|+.||+.||.|||++ ++|||||||+|||++.+
T Consensus 87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHrDlKp~NILl~~~ 164 (299)
T d1jpaa_ 87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSN 164 (299)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT
T ss_pred CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHHhhC-CCccCccccceEEECCC
Confidence 99999999999999999999999999999988653 44699999999999999999999998 99999999999999999
Q ss_pred CCeeeecCCCccccCCCC---------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhh
Q 011353 193 VNPRLSCFGLMKNSRDGR---------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD 262 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~ 262 (488)
+++||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|||+| |+.||.......+..
T Consensus 165 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~ 244 (299)
T d1jpaa_ 165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 244 (299)
T ss_dssp CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 999999999998654321 1245789999999999999999999999999999998 787776543322221
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
... .......+..++..+.+|+.+||+.||++|||+.+|++.|+.+.+.+
T Consensus 245 ~i~-----~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p 294 (299)
T d1jpaa_ 245 AIE-----QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 294 (299)
T ss_dssp HHH-----TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHH-----cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcCh
Confidence 111 11112234456788999999999999999999999999999987654
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-56 Score=412.74 Aligned_cols=244 Identities=21% Similarity=0.288 Sum_probs=209.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCC---CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
++|++++.||+|+||+||+|.. .+++.||||++... .......+.+|+.+++.++|||||++++++.+.+..+|||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 4688999999999999999995 57899999998642 1234567899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--C
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--R 210 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--~ 210 (488)
|||++|+|.+++.. .+.+++..+..++.||+.||.|||++ |||||||||+|||++.++.+||+|||+++..... .
T Consensus 86 Ey~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 162 (263)
T d2j4za1 86 EYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 162 (263)
T ss_dssp ECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred eecCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence 99999999999975 34699999999999999999999999 9999999999999999999999999999876544 3
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...||+.|+|||++.+..++.++|||||||++|||+||+.||............... ...++...++++.+|+.
T Consensus 163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 236 (263)
T d2j4za1 163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------EFTFPDFVTEGARDLIS 236 (263)
T ss_dssp ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHHH
T ss_pred ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHHHHH
Confidence 456899999999999999999999999999999999999998765433222211111 11234456788999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||+.||++|||+.++++|
T Consensus 237 ~~L~~dp~~R~t~~eil~h 255 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLEH 255 (263)
T ss_dssp HHTCSSGGGSCCHHHHHTC
T ss_pred HHccCCHhHCcCHHHHHcC
Confidence 9999999999999999986
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-56 Score=415.74 Aligned_cols=251 Identities=23% Similarity=0.333 Sum_probs=209.9
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
+.+++++++||+|+||+||+|.+.++..||||+++... ...+.|.+|+.++++++|||||+++|++.+ +..++||||+
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~ 89 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence 35778889999999999999998888899999998654 356789999999999999999999998854 5679999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----C
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~ 210 (488)
++|+|.+++.......+++..++.|+.||+.||.|||++ +|+||||||+|||+++++.+||+|||+++..... .
T Consensus 90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~-~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~ 168 (272)
T d1qpca_ 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (272)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence 999999988654445699999999999999999999998 9999999999999999999999999999876543 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchh-hHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+|+.|+|||++.+..++.++|||||||++|||+||+.||.... ........ ........+..++.++.+|+
T Consensus 169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i-----~~~~~~~~p~~~~~~l~~li 243 (272)
T d1qpca_ 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----ERGYRMVRPDNCPEELYQLM 243 (272)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-----HTTCCCCCCTTCCHHHHHHH
T ss_pred ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HhcCCCCCcccChHHHHHHH
Confidence 3457889999999998899999999999999999999776654332 11111111 11112223445677899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhhh
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
.+||+.||++|||+.+|++.|+.+-
T Consensus 244 ~~cl~~~P~~Rpt~~ei~~~L~~~f 268 (272)
T d1qpca_ 244 RLCWKERPEDRPTFDYLRSVLEDFF 268 (272)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhhhh
Confidence 9999999999999999999998754
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-56 Score=416.75 Aligned_cols=247 Identities=16% Similarity=0.206 Sum_probs=207.4
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
.|++++.||+|+||+||+|.. .+++.||||+++.......+.+.+|+.+|++++|||||++++++.+.+..+||||||+
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~ 92 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 92 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence 478899999999999999994 5789999999987666667789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC----CCcc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSY 212 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~----~~~~ 212 (488)
+|+|.+++.+. .+++++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.... ....
T Consensus 93 ~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~-~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 93 GGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp TEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence 99999998653 35699999999999999999999999 999999999999999999999999999875432 2356
Q ss_pred ccCCCCCCccccc-----cCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 213 STNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 213 ~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
.||+.|+|||++. +..++.++|||||||++|||+||+.||................. .....+...++++.+
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~~ 247 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP---PTLAQPSRWSSNFKD 247 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCC---CCCSSGGGSCHHHHH
T ss_pred ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC---CCCCccccCCHHHHH
Confidence 7899999999984 34588999999999999999999998865432211111111100 111223456789999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
|+.+||+.||.+|||+.++++|
T Consensus 248 li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 248 FLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999876
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-56 Score=412.71 Aligned_cols=247 Identities=17% Similarity=0.131 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
++|++++.||+|+||+||+|.. .+|+.||||+++.... ...+.+.+|+.+|++++|||||++++++.+.+..+|||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 4688999999999999999995 5789999999976532 2345689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC------
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------ 208 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~------ 208 (488)
++||+|.+++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||+++++.+||+|||+|+....
T Consensus 85 ~~gg~L~~~l~~--~~~l~e~~~~~i~~qi~~al~ylH~~-~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~ 161 (271)
T d1nvra_ 85 CSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 161 (271)
T ss_dssp CTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHc-CCccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence 999999999964 45699999999999999999999999 999999999999999999999999999986532
Q ss_pred CCccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 209 GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 209 ~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
.....||+.|+|||++.+..+ +.++|||||||++|||+||+.||............ ..............++++.+
T Consensus 162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~ 238 (271)
T d1nvra_ 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAPLA 238 (271)
T ss_dssp BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHH---HHTTCTTSTTGGGSCHHHHH
T ss_pred ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHH---HhcCCCCCCccccCCHHHHH
Confidence 234578999999999988776 57899999999999999999988643211110000 00000111112345678999
Q ss_pred HHHHhccCCCCCCCChHHHHHH
Q 011353 288 LASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~~il~~ 309 (488)
|+.+||+.||++|||+.++++|
T Consensus 239 li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 239 LLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHcCCChhHCcCHHHHhcC
Confidence 9999999999999999999775
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-54 Score=402.15 Aligned_cols=249 Identities=24% Similarity=0.358 Sum_probs=211.8
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 136 (488)
++++++++||+|+||+||+|++++++.||||+++.... ..++|.+|+.++++++||||++++|+|.+.+.+++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 46778899999999999999998888999999986543 46789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----Cc
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~~ 211 (488)
+|+|.+++... ...+++..+.+++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++..... ..
T Consensus 83 ~g~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~~LH~~-~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (258)
T d1k2pa_ 83 NGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160 (258)
T ss_dssp TEEHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT-TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred CCcHHHhhhcc-ccCCcHHHHHHHHHHHHHHHHHHhhc-CcccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence 99999997653 34689999999999999999999998 9999999999999999999999999999765432 23
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
..+|+.|+|||++.+..++.++|||||||++|||+| |+.||.......+...... ......|...++.+.+|+.
T Consensus 161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~ 235 (258)
T d1k2pa_ 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-----GLRLYRPHLASEKVYTIMY 235 (258)
T ss_dssp SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHH
T ss_pred cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHh-----CCCCCCcccccHHHHHHHH
Confidence 457889999999999999999999999999999998 7777765443322221111 1122334556788999999
Q ss_pred HhccCCCCCCCChHHHHHHHHhh
Q 011353 291 RCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
+||+.||++|||+.+++++|..|
T Consensus 236 ~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 236 SCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHCC
T ss_pred HHccCCHhHCcCHHHHHHHhhCC
Confidence 99999999999999999998653
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-55 Score=411.00 Aligned_cols=248 Identities=17% Similarity=0.223 Sum_probs=197.6
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEee--CCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv 131 (488)
.+|++++.||+|+||+||+|. ..+|+.||||+++..... ..+.+.+|+.+|++++|||||++++++.+ .+.++||
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 468899999999999999999 467899999999765432 24568999999999999999999999865 4568999
Q ss_pred EecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCC----CcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 132 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKE----RALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~----~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
||||++|+|.+++.+. .+..+++..++.++.||+.||.|||++. +||||||||+|||++.++.+||+|||+++.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999999998642 2457999999999999999999999861 399999999999999999999999999987
Q ss_pred cCCC----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 206 SRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 206 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||............... .....+...
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~~ 238 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIPYRY 238 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-----CCCCCCTTS
T ss_pred cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----CCCCCCccc
Confidence 5443 3456899999999999999999999999999999999999998765433222111111 111234456
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
++++.+|+.+||+.||.+|||+.++++|
T Consensus 239 s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 239 SDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 7889999999999999999999999875
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-55 Score=420.93 Aligned_cols=251 Identities=18% Similarity=0.243 Sum_probs=204.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
++|++++.||+|+||+||+|.. .+|+.||||+++..... ...++.+|+.+|+.++|||||+++++|.+.+..+|||||
T Consensus 6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy 85 (322)
T d1s9ja_ 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 85 (322)
T ss_dssp GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 3678889999999999999994 67899999999765433 356799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC--CCcc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY 212 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~--~~~~ 212 (488)
++||+|.+++.+ .+.+++..+..++.||+.||.|||++.||+||||||+|||++.++++||+|||+|+.... ....
T Consensus 86 ~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 163 (322)
T d1s9ja_ 86 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163 (322)
T ss_dssp CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---
T ss_pred CCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccc
Confidence 999999999975 346999999999999999999999743899999999999999999999999999986432 3456
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc-------cccc------------------
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-------NIQT------------------ 267 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-------~~~~------------------ 267 (488)
.||+.|+|||++.+..++.++||||+||++|||+||+.||........... ....
T Consensus 164 ~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T d1s9ja_ 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD 243 (322)
T ss_dssp CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------------
T ss_pred cCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccc
Confidence 899999999999999999999999999999999999999865421111000 0000
Q ss_pred ---------c----ccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 ---------L----TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 ---------~----~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
. .............+.++.+|+.+||+.||.+|||+.++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 244 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp --CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0 00000000011245789999999999999999999999997
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-54 Score=412.57 Aligned_cols=244 Identities=19% Similarity=0.221 Sum_probs=207.0
Q ss_pred ccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc---HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
|+++++||+|+||+||+|. ..+++.||||+++...... .+.+.+|+.+|++++|||||++++++.+.+..+|||||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 96 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence 7888999999999999999 5678999999997654332 34689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCCcccc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST 214 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 214 (488)
|++|+|..++.. ++++++..+..++.||+.||.|||++ |||||||||+|||++.++.+||+|||+++.........|
T Consensus 97 ~~~g~l~~~~~~--~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 97 CLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp CSEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred cCCCchHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 999999877654 45699999999999999999999999 999999999999999999999999999998887778889
Q ss_pred CCCCCCcccccc---CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 215 NLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 215 ~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
|+.|+|||++.+ +.++.++|||||||++|||++|+.||.+............. ......+...++.+.+|+.+
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~~s~~~~~li~~ 249 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 249 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCSCTTSCHHHHHHHHH
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC----CCCCCCCCCCCHHHHHHHHH
Confidence 999999999864 45899999999999999999999988654322211111111 11111223456789999999
Q ss_pred hccCCCCCCCChHHHHHH
Q 011353 292 CLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~ 309 (488)
||+.||.+|||+.++++|
T Consensus 250 ~L~~dP~~Rpt~~ell~H 267 (309)
T d1u5ra_ 250 CLQKIPQDRPTSEVLLKH 267 (309)
T ss_dssp HTCSSGGGSCCHHHHTTC
T ss_pred HCcCChhHCcCHHHHHhC
Confidence 999999999999999886
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-55 Score=410.52 Aligned_cols=251 Identities=17% Similarity=0.166 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
++|++++.||+|+||+||+|.. .+++.||||+++... ....+.+.+|+.+|++++||||+++++++.+.+..++||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 5688999999999999999995 678999999986421 234567999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC---
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~--- 209 (488)
||++||+|.+++.. .+.+++..+..++.|++.||.|||++ +||||||||+|||+++++.+||+|||+++.....
T Consensus 88 Ey~~gg~L~~~~~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~ 164 (288)
T d1uu3a_ 88 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164 (288)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EccCCCCHHHhhhc--cCCCCHHHHHHHHHHHHHHHHhhccc-cEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence 99999999999865 35699999999999999999999999 9999999999999999999999999999875432
Q ss_pred ---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||............... ...++...++++.
T Consensus 165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 238 (288)
T d1uu3a_ 165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKAR 238 (288)
T ss_dssp -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT------CCCCCTTCCHHHH
T ss_pred cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC------CCCCCccCCHHHH
Confidence 2356899999999999999999999999999999999999998765433222211111 1123455678899
Q ss_pred HHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 287 ~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+||.+||+.||.+|||+.+++++.. +..++
T Consensus 239 ~li~~~L~~dP~~R~t~~e~~~~~~-i~~Hp 268 (288)
T d1uu3a_ 239 DLVEKLLVLDATKRLGCEEMEGYGP-LKAHP 268 (288)
T ss_dssp HHHHTTSCSSGGGSTTSGGGTCHHH-HHTSG
T ss_pred HHHHHHccCCHhHCcCHHHHcCCHH-HHcCC
Confidence 9999999999999999999876543 33443
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.3e-54 Score=409.24 Aligned_cols=247 Identities=14% Similarity=0.169 Sum_probs=193.7
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.|++++.||+|+||+||+|.. .+++.||||++...... ....+.+|+.+|+.++|||||++++++.+.+..+||||||
T Consensus 10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~ 89 (307)
T d1a06a_ 10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 89 (307)
T ss_dssp TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 378899999999999999995 57899999999765432 3456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC---CCCCeeeecCCCccccCCC---
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~DfGla~~~~~~--- 209 (488)
+||+|.+++.. .+.+++..+..++.||+.||.|||++ +|+||||||+|||+. +++.+||+|||+++.....
T Consensus 90 ~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~ 166 (307)
T d1a06a_ 90 SGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 166 (307)
T ss_dssp CSCBHHHHHHT--CSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCC------------
T ss_pred CCCcHHHhhhc--ccCCCHHHHHHHHHHHHHHHHhhhhc-eeeeEEecccceeecccCCCceEEEeccceeEEccCCCee
Confidence 99999999965 45699999999999999999999999 999999999999994 5789999999999876543
Q ss_pred CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+............... ......+...++++.+|+
T Consensus 167 ~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 244 (307)
T d1a06a_ 167 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY--EFDSPYWDDISDSAKDFI 244 (307)
T ss_dssp ------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCC--CCCTTTTTTSCHHHHHHH
T ss_pred eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCC--CCCCccccCCCHHHHHHH
Confidence 345689999999999999999999999999999999999999876543322221111111 111122345678899999
Q ss_pred HHhccCCCCCCCChHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~ 309 (488)
.+||+.||++|||+.++++|
T Consensus 245 ~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 245 RHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp HHHSCSSGGGSCCHHHHHHS
T ss_pred HHHccCCHhHCcCHHHHhcC
Confidence 99999999999999999887
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-54 Score=405.00 Aligned_cols=253 Identities=23% Similarity=0.339 Sum_probs=208.6
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
++++++.+.||+|+||+||+|.+.++..||||+++... ...+.|.+|+.++++++|||||+++|++.+ +..++||||+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~ 93 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 93 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEec
Confidence 45788999999999999999998888889999997654 356789999999999999999999999854 5689999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-----C
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-----~ 210 (488)
++|+|..++.....+.++|..++.++.||+.||.|||++ +|+||||||+||||+.++.+||+|||+++..... .
T Consensus 94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 172 (285)
T d1fmka3 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 172 (285)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh-heecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence 999999998765455699999999999999999999998 9999999999999999999999999999865432 2
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHH-HhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+|+.|+|||++.++.++.++|||||||++|||+||+.||....... ..... ........+..+++++.+|+
T Consensus 173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i-----~~~~~~~~~~~~~~~l~~li 247 (285)
T d1fmka3 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-----ERGYRMPCPPECPESLHDLM 247 (285)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-----HTTCCCCCCTTSCHHHHHHH
T ss_pred cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH-----HhcCCCCCCcccCHHHHHHH
Confidence 3457899999999999999999999999999999999876665432211 11111 11112234455678899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.+||+.||++|||+.+|++.|+.....
T Consensus 248 ~~cl~~dP~~Rps~~~i~~~L~~~~~~ 274 (285)
T d1fmka3 248 CQCWRKEPEERPTFEYLQAFLEDYFTS 274 (285)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence 999999999999999999999876644
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-54 Score=404.28 Aligned_cols=254 Identities=21% Similarity=0.284 Sum_probs=203.7
Q ss_pred cccccccCCCCCCCeEEEEEeCC-C----CEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKLEN-Q----FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.+++.+.||+|+||+||+|.+.+ + ..||||+++..... ...+|.+|+.++++++|||||+++|++.+.+..++|
T Consensus 8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v 87 (283)
T d1mqba_ 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 87 (283)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence 45566677999999999998543 2 47999999765433 345699999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+.+|+|.+++... ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~lH~~-~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~ 165 (283)
T d1mqba_ 88 TEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 165 (283)
T ss_dssp EECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EEecccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhcccc-ccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence 9999999999988653 45699999999999999999999998 9999999999999999999999999999865432
Q ss_pred -----CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHH
Q 011353 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||........ ....+........+..++..
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~ 241 (283)
T d1mqba_ 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE----VMKAINDGFRLPTPMDCPSA 241 (283)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTTCCCCCCTTCBHH
T ss_pred cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH----HHHHHhccCCCCCchhhHHH
Confidence 123468899999999999999999999999999999997766654321111 01111111222344556788
Q ss_pred HHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 285 l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
+.+|+.+||+.||++|||+.+|++.|+.+.+.+
T Consensus 242 l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p 274 (283)
T d1mqba_ 242 IYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274 (283)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence 999999999999999999999999999987653
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-54 Score=400.84 Aligned_cols=243 Identities=19% Similarity=0.245 Sum_probs=197.6
Q ss_pred ccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEee----CCeeEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLV 131 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv 131 (488)
+++..+||+|+||+||+|.. .+++.||||++..... ...+.|.+|+++|++++|||||++++++.+ ...++||
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 35556789999999999995 5688999999875432 235579999999999999999999999865 3458999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccCcceeeC-CCCCeeeecCCCccccCC
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--iiH~Dlkp~Nill~-~~~~~kl~DfGla~~~~~ 208 (488)
|||+++|+|.+++.+ ...+++..+..++.||+.||.|||++ + |+||||||+|||++ .++.+||+|||+++....
T Consensus 91 mE~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence 999999999999975 35699999999999999999999998 7 99999999999996 578999999999986544
Q ss_pred C--CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh-HHHhhccccccccccccCCCChHHHHHH
Q 011353 209 G--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 209 ~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
. ....||+.|+|||++.+ .++.++|||||||++|||+||+.||..... ..+.......... ..++...++++
T Consensus 168 ~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~ 242 (270)
T d1t4ha_ 168 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP----ASFDKVAIPEV 242 (270)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC----GGGGGCCCHHH
T ss_pred CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC----cccCccCCHHH
Confidence 3 34578999999999874 699999999999999999999999864321 1111111111111 11223345679
Q ss_pred HHHHHHhccCCCCCCCChHHHHHH
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+|+.+||+.||++|||+.|+++|
T Consensus 243 ~~li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 243 KEIIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHccCCHhHCcCHHHHhCC
Confidence 999999999999999999999876
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-54 Score=403.74 Aligned_cols=243 Identities=20% Similarity=0.278 Sum_probs=201.8
Q ss_pred cCCCCCCCeEEEEEeC---CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCCCC
Q 011353 64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (488)
Q Consensus 64 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 139 (488)
+||+|+||+||+|.+. ++..||||+++..... ..++|.+|+.+|++++|||||+++|++.+ +..+|||||+++|+
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~ 94 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 94 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence 4899999999999853 3557999999765433 35679999999999999999999999865 56899999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-------Ccc
Q 011353 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------RSY 212 (488)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-------~~~ 212 (488)
|.+++.. .+..+++..+..++.||+.||.|||++ +||||||||+|||++.++.+||+|||+++..... ...
T Consensus 95 L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~ 172 (285)
T d1u59a_ 95 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 172 (285)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSS
T ss_pred HHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCcCchhheeeccCCceeeccchhhhccccccccccccccc
Confidence 9999854 345699999999999999999999998 9999999999999999999999999999865433 233
Q ss_pred ccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 213 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
.+|+.|+|||++.++.++.++|||||||++|||+| |+.||.......+... +........|..+++++.+||.+
T Consensus 173 ~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~-----i~~~~~~~~p~~~~~~l~~li~~ 247 (285)
T d1u59a_ 173 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF-----IEQGKRMECPPECPPELYALMSD 247 (285)
T ss_dssp CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH-----HHTTCCCCCCTTCCHHHHHHHHH
T ss_pred ccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCCCCCCCCcCCHHHHHHHHH
Confidence 56889999999999999999999999999999998 8888765432222111 11111223455677899999999
Q ss_pred hccCCCCCCCChHHHHHHHHhhh
Q 011353 292 CLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 292 cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
||+.||++|||+.+|++.|+.+.
T Consensus 248 cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 248 CWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp TTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCCHhHCcCHHHHHHHHHHHH
Confidence 99999999999999999987654
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=5.2e-54 Score=415.12 Aligned_cols=250 Identities=19% Similarity=0.158 Sum_probs=211.3
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
|+.|++++.||+|+||+||+|.. .+|+.||||+++.....+...+.+|+.+|++++|||||+++++|.+.+.++|||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 45689999999999999999994 67999999999876545566789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC--CCCCeeeecCCCccccCCCC--
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR-- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~DfGla~~~~~~~-- 210 (488)
|+||+|.+++.. ...++++..+..|+.||+.||.|||++ |||||||||+|||++ .++.+||+|||+++......
T Consensus 108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 999999998854 234699999999999999999999998 999999999999997 67899999999998876543
Q ss_pred -ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+|+.|+|||++.+..++.++|||||||++|||+||+.||.+............... ..........++++.+||
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 263 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW--EFDEDAFSSVSPEAKDFI 263 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC--CCCSSTTTTSCHHHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHH
Confidence 34689999999999999999999999999999999999999876533222211111111 011122344678899999
Q ss_pred HHhccCCCCCCCChHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~ 309 (488)
.+||+.||.+|||+.++++|
T Consensus 264 ~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 264 KNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp HTTSCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999886
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=9.7e-54 Score=412.87 Aligned_cols=249 Identities=18% Similarity=0.137 Sum_probs=209.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.+|++++.||+|+||+||+|.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+.+..+||||||
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 105 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 105 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 3688999999999999999994 678999999998766555677999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC--CCCCeeeecCCCccccCCCC---
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR--- 210 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~DfGla~~~~~~~--- 210 (488)
+||+|.+++.+. .+.+++..+..|+.||+.||.|||++ |||||||||+|||++ .++.+||+|||+++......
T Consensus 106 ~gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 183 (350)
T d1koaa2 106 SGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 183 (350)
T ss_dssp CSCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE
T ss_pred CCCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhc-CCeeeeechhHeeeccCCCCeEEEeecchheecccccccc
Confidence 999999999642 44699999999999999999999999 999999999999995 46889999999998765543
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...||+.|+|||++.+..++.++|||||||++|||+||+.||.+............... ..........++++.+||.
T Consensus 184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~ 261 (350)
T d1koaa2 184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIR 261 (350)
T ss_dssp EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCCGGGGGCCHHHHHHHH
T ss_pred eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHHH
Confidence 35789999999999999999999999999999999999999876533322211111000 0011112345678999999
Q ss_pred HhccCCCCCCCChHHHHHH
Q 011353 291 RCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rps~~~il~~ 309 (488)
+||+.||++|||+.++++|
T Consensus 262 ~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 262 KLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp HHCCSSGGGSCCHHHHHHS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999987
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-54 Score=398.78 Aligned_cols=252 Identities=25% Similarity=0.353 Sum_probs=202.4
Q ss_pred CCcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEee-CCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~E~ 134 (488)
.+++++++.||+|+||.||+|.+ .|..||||+++... ..+.|.+|+.++++++||||++++|+|.+ .+..++||||
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred HHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence 45678889999999999999998 46789999997543 45779999999999999999999999865 4568999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-Cccc
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYS 213 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~~ 213 (488)
+++|+|.++|.......+++..+++|+.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ....
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~ 161 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 161 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC-ceeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence 9999999999754444689999999999999999999998 9999999999999999999999999999875443 3456
Q ss_pred cCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHHh
Q 011353 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (488)
Q Consensus 214 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (488)
+|+.|+|||++.+..++.++|||||||++|||+| |+.|+.......+... +.......++...++++.+|+.+|
T Consensus 162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~~~~li~~c 236 (262)
T d1byga_ 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-----VEKGYKMDAPDGCPPAVYEVMKNC 236 (262)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH-----HTTTCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHH-----HHcCCCCCCCccCCHHHHHHHHHH
Confidence 7889999999999999999999999999999999 5655543322211111 111223344555678999999999
Q ss_pred ccCCCCCCCChHHHHHHHHhhhcC
Q 011353 293 LQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 293 l~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
|+.||.+|||+.+++++|+.++.+
T Consensus 237 l~~dP~~Rps~~~l~~~L~~i~~~ 260 (262)
T d1byga_ 237 WHLDAAMRPSFLQLREQLEHIKTH 260 (262)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccCHhHCcCHHHHHHHHHHHHhC
Confidence 999999999999999999988653
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-54 Score=400.39 Aligned_cols=242 Identities=21% Similarity=0.260 Sum_probs=197.9
Q ss_pred ccCCCCCCCeEEEEEeC---CCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 63 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
++||+|+||+||+|.+. .++.||||+++..... ..+.|.+|+.+|++++|||||+++|+|.+ +..+|||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 35899999999999853 2468999999754322 24579999999999999999999999865 567899999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC-------
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------- 210 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~------- 210 (488)
|+|.+++.. ...+++..++.|+.||+.||.|||++ +||||||||+|||++.++.+||+|||+++......
T Consensus 92 g~L~~~l~~--~~~l~~~~~~~i~~qi~~gl~ylH~~-~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 92 GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CcHHHHHhh--ccCCCHHHHHHHHHHHHHHHhhHHhC-CcccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 999999975 45699999999999999999999998 99999999999999999999999999998654332
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...||+.|+|||++.+..++.++|||||||++|||+| |+.||.+.....+... +........+..++.++.+|+
T Consensus 169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~-----i~~~~~~~~p~~~~~~~~~li 243 (277)
T d1xbba_ 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM-----LEKGERMGCPAGCPREMYDLM 243 (277)
T ss_dssp --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-----HHTTCCCCCCTTCCHHHHHHH
T ss_pred ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHH-----HHcCCCCCCCcccCHHHHHHH
Confidence 2357889999999999999999999999999999998 7888765432222111 111112234455678899999
Q ss_pred HHhccCCCCCCCChHHHHHHHHhh
Q 011353 290 SRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+||+.||++|||+.+|+..|+..
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCH
Confidence 999999999999999999888754
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-54 Score=411.26 Aligned_cols=250 Identities=21% Similarity=0.283 Sum_probs=204.1
Q ss_pred CcccccccCCCCCCCeEEEEEeC-CC-----CEEEEEEcCCCC-CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE-NQ-----FRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 128 (488)
+++++.+.||+|+||+||+|+.. .+ ..||||.+.... ......+.+|+.++.++ +|||||++++++.+.+..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 46788899999999999999853 22 369999987543 23456799999999998 899999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcce
Q 011353 129 LLVAEYMPNDTLAKHLFHWET---------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Ni 187 (488)
++|||||++|+|.++|..... ..+++..++.++.||+.||.|||++ +||||||||+||
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~IiHRDlKp~Ni 195 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARNV 195 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGGGE
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCchhcc
Confidence 999999999999999975321 3589999999999999999999999 999999999999
Q ss_pred eeCCCCCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHH
Q 011353 188 VFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLI 260 (488)
Q Consensus 188 ll~~~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 260 (488)
|++.++.+||+|||+|+...... ...+|+.|||||++.++.++.++|||||||++|||+| |+.||.+......
T Consensus 196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~ 275 (325)
T d1rjba_ 196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 275 (325)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999998654332 3346899999999999999999999999999999998 7888765322111
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHH
Q 011353 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 311 (488)
. ..++........+..+++++.+||.+||+.||++|||+.+|+++|.
T Consensus 276 ~----~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 276 F----YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp H----HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H----HHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 1 1111111222345556789999999999999999999999999985
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-53 Score=405.93 Aligned_cols=245 Identities=18% Similarity=0.229 Sum_probs=210.7
Q ss_pred CCcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCC---CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
.++|++++.||+|+||.||+|. ..+|+.||||++++. .....+.+.+|+.+|+.++||||+++++++.+.+.+++|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 3578899999999999999999 467999999999743 223467789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||++||+|.+++.. .+.+++..+..++.||+.||.|||++ |||||||||+|||++.+|.+||+|||+++.....
T Consensus 84 ~ey~~gg~L~~~~~~--~~~~~e~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhc--ccCCcHHHHHHHHHHHhhhhhhhhhc-CccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence 999999999999975 45699999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.....+....... ...+|...++++.+
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d 234 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHH
Confidence 3457899999999999999999999999999999999999998876544332222111 11345557788999
Q ss_pred HHHHhccCCCCCCCC-----hHHHHHH
Q 011353 288 LASRCLQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps-----~~~il~~ 309 (488)
||.+||+.||.+||+ +.++++|
T Consensus 235 li~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHhhccCCchhhcccccccHHHHHcC
Confidence 999999999999995 7888876
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.5e-53 Score=400.79 Aligned_cols=244 Identities=18% Similarity=0.210 Sum_probs=210.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCC---CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 132 (488)
++|++++.||+|+||+||+|.. .+|+.||||+++.. .....+.+.+|+.+|+.++|||||++++++.+.+..++||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 5688999999999999999994 67999999998643 2234677999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-Cc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RS 211 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~~ 211 (488)
||++||+|..++.. ...+++..+..++.||+.||.|||++ |||||||||+|||++.+|.+||+|||+++..... ..
T Consensus 84 E~~~gg~l~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 160 (316)
T d1fota_ 84 DYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 160 (316)
T ss_dssp CCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred eecCCccccccccc--cccccccHHHHHHHHHHHhhhhhccC-cEEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence 99999999999875 44589999999999999999999999 9999999999999999999999999999876554 45
Q ss_pred cccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHHH
Q 011353 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (488)
Q Consensus 212 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (488)
..||+.|+|||++.+..++.++|||||||++|||+||+.||.+............. ...++...++++.+++.+
T Consensus 161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~ 234 (316)
T d1fota_ 161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLSR 234 (316)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHH
T ss_pred ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHH
Confidence 67999999999999999999999999999999999999999765433222221111 112344567789999999
Q ss_pred hccCCCCCCC-----ChHHHHHH
Q 011353 292 CLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 292 cl~~~p~~Rp-----s~~~il~~ 309 (488)
||..||.+|+ |+.++++|
T Consensus 235 ~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 235 LITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HhhhCHHhccccchhhHHHHHcC
Confidence 9999999996 89999887
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-53 Score=399.40 Aligned_cols=247 Identities=17% Similarity=0.167 Sum_probs=205.9
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC------ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.|++++.||+|+||+||+|.. .+|+.||||+++.... ...+.+.+|+.+|++++|||||++++++.+.+..+|
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 488999999999999999995 6789999999864322 135679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC----CeeeecCCCcccc
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 206 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~DfGla~~~ 206 (488)
|||||+||+|.+++.. .+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||+++..
T Consensus 91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~-~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhc-ceeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 9999999999999975 34699999999999999999999999 999999999999998776 4999999999876
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.+................ .....+...+.
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~ 245 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE--FEDEYFSNTSA 245 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSCH
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCchhcCCCCH
Confidence 543 3456789999999999989999999999999999999999998765433222111110000 00011123567
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.+.+||.+||+.||.+|||+.++++|
T Consensus 246 ~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 246 LAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 89999999999999999999999886
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-52 Score=397.69 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=207.7
Q ss_pred CcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCcc-HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
++++++++||+|+||+||+|+.. +++.||||+++...... .++|.+|+.+|++++||||++++++|.+.+..+
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~ 92 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 92 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence 35788899999999999999853 35789999998654333 456999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcce
Q 011353 130 LVAEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Ni 187 (488)
+||||+++|+|.+++.... ...+++..++.|+.||+.||+|||++ ++|||||||+||
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~-~ivHrDlKp~NI 171 (301)
T d1lufa_ 93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDLATRNC 171 (301)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGE
T ss_pred EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC-CeEeeEEcccce
Confidence 9999999999999996421 23489999999999999999999998 999999999999
Q ss_pred eeCCCCCeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCC-CCchhhHHH
Q 011353 188 VFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLI 260 (488)
Q Consensus 188 ll~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p-~~~~~~~~~ 260 (488)
|++.++.+||+|||+++..... ....+|+.|+|||.+.+..++.++|||||||++|||++|..| |........
T Consensus 172 Lld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~ 251 (301)
T d1lufa_ 172 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 251 (301)
T ss_dssp EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred EECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHH
Confidence 9999999999999998754322 234577899999999999999999999999999999999754 443322222
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhh
Q 011353 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~ 314 (488)
..... .......+..+++++.+|+.+||+.+|++|||+.+|++.|+++.
T Consensus 252 ~~~v~-----~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 252 IYYVR-----DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp HHHHH-----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHHHH-----cCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11111 11112234556778999999999999999999999999999875
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-52 Score=391.28 Aligned_cols=251 Identities=20% Similarity=0.269 Sum_probs=198.7
Q ss_pred CcccccccCCCCCCCeEEEEEeCC----CCEEEEEEcCCCCCcc-HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
++|++.+.||+|+||+||+|.+.. +..||||.++...... .+.|.+|+.+|++++|||||++++++. .+..++|
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv 85 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 85 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence 578888999999999999998532 3569999987654333 456999999999999999999999996 4678999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+++|+|.+++... ...+++..++.++.||+.||.|||++ ++|||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~E~~~~g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~ 163 (273)
T d1mp8a_ 86 MELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163 (273)
T ss_dssp EECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EEeccCCcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhccc-CeeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence 9999999999987653 45699999999999999999999999 9999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHHHH
Q 011353 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (488)
....+|+.|+|||++.+..++.++|||||||++|||+| |..||............. .......+..+++.+
T Consensus 164 ~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~~ 238 (273)
T d1mp8a_ 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-----NGERLPMPPNCPPTL 238 (273)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----TTCCCCCCTTCCHHH
T ss_pred eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHHH
Confidence 23456889999999999999999999999999999998 676665432221111111 111123455677899
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 286 VRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 286 ~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.+||.+||+.||++|||+.+|+++|+.+.+
T Consensus 239 ~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 239 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999998754
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.1e-52 Score=388.17 Aligned_cols=249 Identities=18% Similarity=0.163 Sum_probs=207.9
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCcc---------HHHHHHHHHHHhccC-CCCcccEEEEEee
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---------ARQFLEEARAVGQLR-NRRLANLLGCCCE 124 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 124 (488)
|.+|++++.||+|+||+||+|+. .+++.||||+++...... .+.+.+|+.++++++ ||||+++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 56789999999999999999994 678999999997643221 235889999999996 9999999999999
Q ss_pred CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 125 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
.+..+|||||++||+|.++|.. .+++++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccccccceEEEcCCCCeEEccchhee
Confidence 9999999999999999999975 44699999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCC---CccccCCCCCCcccccc------CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccC
Q 011353 205 NSRDG---RSYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (488)
Q Consensus 205 ~~~~~---~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
..... ....||+.|+|||++.+ ..++.++||||+||++|||+||+.||...............-.. ...
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~--~~~ 236 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ--FGS 236 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCC--CCC
Confidence 76543 34568999999999863 34688999999999999999999999865433222211111110 111
Q ss_pred CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
......++++.+|+.+||+.||.+|||+.++++|
T Consensus 237 ~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 237 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred cccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 2234567899999999999999999999999876
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.3e-52 Score=401.60 Aligned_cols=245 Identities=17% Similarity=0.171 Sum_probs=210.2
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCC---CCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEE
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 131 (488)
+++|++++.||+|+||.||+|.. .+|+.||||+++.. .....+.+.+|+.+|+.++|||||++++++.+....++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 45789999999999999999995 57999999998642 123456789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-C
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R 210 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-~ 210 (488)
|||+.+|+|.+++.. .+.+++..+..++.||+.||.|||++ +||||||||+|||++.+|++||+|||+++..... .
T Consensus 120 ~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~ 196 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred cccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence 999999999999975 34699999999999999999999999 9999999999999999999999999999876544 4
Q ss_pred ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHHH
Q 011353 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (488)
...||+.|||||++.+..++.++|||||||++|||+||+.||.+.............. ...+...++++.+|+.
T Consensus 197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~li~ 270 (350)
T d1rdqe_ 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK------VRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTCCHHHHHHHH
T ss_pred cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCC------CCCCccCCHHHHHHHH
Confidence 5678999999999999999999999999999999999999987654332222211111 1234456788999999
Q ss_pred HhccCCCCCCC-----ChHHHHHH
Q 011353 291 RCLQYEPRERP-----NPRSLVTA 309 (488)
Q Consensus 291 ~cl~~~p~~Rp-----s~~~il~~ 309 (488)
+||+.||.+|+ |+.++++|
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhhhCHHhccccccccHHHHHcC
Confidence 99999999994 89999876
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-52 Score=398.61 Aligned_cols=252 Identities=18% Similarity=0.271 Sum_probs=203.9
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCC----EEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 130 (488)
.+|++++.||+|+||+||+|.+ .+|+ .||||+++... ....++|.+|+.++++++|||||+++|+|.+. ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 4688999999999999999985 3443 68999987543 33467899999999999999999999999764 5678
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~~ 210 (488)
++||+.+|+|.+++... ...+++..++.++.||+.||.|||++ +||||||||+|||++.++++||+|||+++......
T Consensus 88 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~-~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHc-CcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 89999999999988763 45699999999999999999999998 99999999999999999999999999998754322
Q ss_pred ------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChHHHH
Q 011353 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (488)
Q Consensus 211 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (488)
...||+.|+|||++.++.++.++|||||||++|||+| |..||.......+. ..+........+..++.
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~-----~~i~~~~~~~~p~~~~~ 240 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----SILEKGERLPQPPICTI 240 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH-----HHHHHTCCCCCCTTBCH
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHH-----HHHHcCCCCCCCcccCH
Confidence 2346899999999999999999999999999999999 56555443222111 11111112234455778
Q ss_pred HHHHHHHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 284 ~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
.+.+|+.+||+.||.+|||+.+|+++|..+.+.
T Consensus 241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~ 273 (317)
T d1xkka_ 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence 899999999999999999999999999988654
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-52 Score=395.92 Aligned_cols=257 Identities=21% Similarity=0.282 Sum_probs=208.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCC--EEEEEEcCCCC-CccHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCeeE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQF--RIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 129 (488)
+|+++++.++||+|+||+||+|.+ .++. .||||+++... ....+.|.+|+.+|.++ +|||||++++++.+.+..+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 456778888899999999999995 3443 57888886443 23455799999999999 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCe
Q 011353 130 LVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (488)
+||||+++|+|.++|... ....+++..+..++.||+.||.|||++ ++|||||||+|||++.++.+
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~-~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC-CccccccccceEEEcCCCce
Confidence 999999999999999643 235699999999999999999999999 99999999999999999999
Q ss_pred eeecCCCccccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCC-CCchhhHHHhhccccccccc
Q 011353 196 RLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRDRNIQTLTDS 271 (488)
Q Consensus 196 kl~DfGla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~~ 271 (488)
||+|||+++..... ....+|+.|+|||.+.+..++.++|||||||++|||++|..| |.......+..... .
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~-----~ 241 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-----Q 241 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG-----G
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----h
Confidence 99999999765432 234578999999999999999999999999999999998765 43332222211111 1
Q ss_pred cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
......+..+++++.+||.+||+.||++|||+.+|+++|+.+.+..
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~ 287 (309)
T d1fvra_ 242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 287 (309)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 1122345557789999999999999999999999999999987654
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-52 Score=397.88 Aligned_cols=247 Identities=16% Similarity=0.143 Sum_probs=200.0
Q ss_pred Cccccccc-CCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhcc-CCCCcccEEEEEee----CCeeE
Q 011353 57 AMENIVSE-HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE----GDERL 129 (488)
Q Consensus 57 ~~~~~i~~-lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~~~ 129 (488)
++|.++++ ||+|+||+||+|. ..+++.||||+++. ...+.+|+.++.++ +|||||+++++|.+ ...++
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 46788865 8999999999999 46789999999863 35678899987655 89999999999876 46689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC---CCCeeeecCCCcccc
Q 011353 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS 206 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~DfGla~~~ 206 (488)
||||||+||+|.++|.......+++..+..|+.||+.||.|||++ ||+||||||+|||++. .+.+||+|||+++..
T Consensus 86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCccccccccccccccccccccccccccceeeec
Confidence 999999999999999765556799999999999999999999999 9999999999999975 567999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccc--cCCCChHH
Q 011353 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL--EGQFSSDE 281 (488)
Q Consensus 207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 281 (488)
... ....||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.............+..... ........
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 244 (335)
T d2ozaa1 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 244 (335)
T ss_dssp CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence 443 3457899999999999989999999999999999999999998754321111111111111100 00111345
Q ss_pred HHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 282 GTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
++++.+|+.+||+.||++|||+.++++|
T Consensus 245 s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 245 SEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 7889999999999999999999999987
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=8.4e-52 Score=388.52 Aligned_cols=253 Identities=17% Similarity=0.201 Sum_probs=203.9
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc---HHHHHHHHHHHhccCCCCcccEEEEEeeCC----ee
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGD----ER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~ 128 (488)
++|++++.||+|+||+||+|. ..+|+.||||+++.....+ ...|.+|+.+++.++|||||++++++...+ ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 358899999999999999999 4679999999998654333 446899999999999999999999997654 37
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
||||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ |||||||||+|||++.++.++|+|||.+.....
T Consensus 87 ~lvmE~~~g~~L~~~~~~--~~~l~~~~~~~i~~qi~~al~~lH~~-~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~ 163 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 163 (277)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred EEEEECCCCCEehhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCccccCcccccCccccceeehhhhhhhhcc
Confidence 899999999999998865 35699999999999999999999998 999999999999999999999999998865432
Q ss_pred C-------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHH
Q 011353 209 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (488)
Q Consensus 209 ~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
. ....||+.|+|||++.+..++.++|||||||++|||+||+.||...............-.. .........
T Consensus 164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 241 (277)
T d1o6ya_ 164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI--PPSARHEGL 241 (277)
T ss_dssp ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC--CGGGTSSSC
T ss_pred ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCC--CCchhccCC
Confidence 2 3346899999999999989999999999999999999999998765432222111111100 011122345
Q ss_pred HHHHHHHHHHhccCCCCCCC-ChHHHHHHHHhhh
Q 011353 282 GTELVRLASRCLQYEPRERP-NPRSLVTALVTLQ 314 (488)
Q Consensus 282 ~~~l~~li~~cl~~~p~~Rp-s~~~il~~L~~~~ 314 (488)
++++.+++.+||+.||.+|| |++++++.|.+++
T Consensus 242 s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 242 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 67899999999999999999 8999999988775
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-52 Score=388.55 Aligned_cols=251 Identities=21% Similarity=0.280 Sum_probs=198.1
Q ss_pred CCcccccccCCCCCCCeEEEEEeC--CC--CEEEEEEcCCCCC---ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCee
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLE--NQ--FRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
..+|+++++||+|+||.||+|.+. ++ ..||||+++.... ...++|.+|+.+|++++|||||+++|++.+ ...
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence 357889999999999999999842 22 4689999975432 235679999999999999999999999976 467
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++||||+++|+|.+++... .+.+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred heeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhC-CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 8999999999999988653 34699999999999999999999998 999999999999999999999999999987644
Q ss_pred CC-------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccccccccccccCCCChH
Q 011353 209 GR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (488)
Q Consensus 209 ~~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
.. ...++..|+|||++.+..++.++|||||||++|||+| |+.||............. ........+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~----~~~~~~~~~~~ 239 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID----KEGERLPRPED 239 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH----TSCCCCCCCTT
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHH----hCCCCCCCccc
Confidence 32 2346789999999999999999999999999999998 788876554333222111 11112233445
Q ss_pred HHHHHHHHHHHhccCCCCCCCChHHHHHHHHhh
Q 011353 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (488)
Q Consensus 281 ~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~ 313 (488)
.+..+.+|+.+||+.||++|||+.+|++.|++.
T Consensus 240 ~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 677899999999999999999999999998865
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-52 Score=396.57 Aligned_cols=249 Identities=16% Similarity=0.179 Sum_probs=207.8
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
|++|.+++.||+|+||+||+|.. .+++.||||+++... .+...+.+|+.+|+.++|||||++++++.+.+.+||||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 67899999999999999999994 578899999998654 3345688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC--CCCeeeecCCCccccCCCC--
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR-- 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~--~~~~kl~DfGla~~~~~~~-- 210 (488)
|+||+|.+++... +..+++..+..|+.||+.||.|||++ ||+||||||+|||++. .+.+||+|||+++......
T Consensus 83 ~~gg~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH~~-~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~ 160 (321)
T d1tkia_ 83 ISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence 9999999999653 34699999999999999999999998 9999999999999974 4579999999998765443
Q ss_pred -ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHHH
Q 011353 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (488)
Q Consensus 211 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (488)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..||.................. .........+.++.+|+
T Consensus 161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li 238 (321)
T d1tkia_ 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTSCHHHHHHH
T ss_pred cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CChhhccCCCHHHHHHH
Confidence 345789999999999999999999999999999999999998765433222211111000 00000113467899999
Q ss_pred HHhccCCCCCCCChHHHHHH
Q 011353 290 SRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 290 ~~cl~~~p~~Rps~~~il~~ 309 (488)
.+||..||.+|||+.++++|
T Consensus 239 ~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 239 DRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHHS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999987
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-52 Score=393.97 Aligned_cols=255 Identities=20% Similarity=0.248 Sum_probs=196.7
Q ss_pred CCcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeC-C
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-D 126 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~ 126 (488)
.++|+++++||+|+||.||+|... +++.||||+++..... ..+.+.+|...+.++ +|+||+.+++++.+. .
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 357889999999999999999842 2468999999765432 355688888888888 689999999998664 4
Q ss_pred eeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
..++|||||++|+|.+++.... ...+++..+..++.||+.||.|||++ +||||||||+|||++++
T Consensus 92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-~ivHrDlKp~NILl~~~ 170 (299)
T d1ywna1 92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEK 170 (299)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGG
T ss_pred eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC-CCcCCcCCccceeECCC
Confidence 6899999999999999996432 23589999999999999999999998 99999999999999999
Q ss_pred CCeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCC-CCchhhHHHhhccc
Q 011353 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRDRNI 265 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p-~~~~~~~~~~~~~~ 265 (488)
+++||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||..| |.........
T Consensus 171 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~---- 246 (299)
T d1ywna1 171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 246 (299)
T ss_dssp GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH----
T ss_pred CcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHH----
Confidence 99999999999864432 234678999999999999999999999999999999998654 4432111100
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
...+........+...++++.+++.+||+.||++|||+.+++++|+.+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 247 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 00111111223344567789999999999999999999999999998754
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=394.12 Aligned_cols=244 Identities=18% Similarity=0.232 Sum_probs=205.4
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC---CccHHHHHHHHHHHh-ccCCCCcccEEEEEeeCCeeEEE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVG-QLRNRRLANLLGCCCEGDERLLV 131 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~~~lv 131 (488)
++|++++.||+|+||+||+|.. .+++.||||+++... ....+.+.+|..++. .++|||||++++++.+++..|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 4688899999999999999994 579999999996431 234556777777765 67999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +++||||||+|||++.++++||+|||+++.....
T Consensus 82 mEy~~~g~L~~~i~~--~~~~~e~~~~~~~~qi~~al~ylH~~-~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCcccceeecCCCceeccccchhhhcccccc
Confidence 999999999999975 34689999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHH
Q 011353 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (488)
Q Consensus 210 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+............. ...++...++++.+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d 232 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKD 232 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHH
Confidence 3456899999999999999999999999999999999999999765443332221111 11334556788999
Q ss_pred HHHHhccCCCCCCCChH-HHHHH
Q 011353 288 LASRCLQYEPRERPNPR-SLVTA 309 (488)
Q Consensus 288 li~~cl~~~p~~Rps~~-~il~~ 309 (488)
|+.+||+.||.+|||+. ++++|
T Consensus 233 li~~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHhcccCCCCCcCHHHHHHhC
Confidence 99999999999999985 67664
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.3e-51 Score=398.65 Aligned_cols=245 Identities=18% Similarity=0.169 Sum_probs=201.0
Q ss_pred CCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCC---ccHHHHHHH---HHHHhccCCCCcccEEEEEeeCCee
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEE---ARAVGQLRNRRLANLLGCCCEGDER 128 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e---~~~l~~l~h~niv~l~~~~~~~~~~ 128 (488)
.++|++++.||+|+||.||+|.. .+|+.||||++..... .....+.+| +.+++.++|||||++++++.+.+..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 45788999999999999999994 5799999999863211 122334444 6677778899999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++||||++||+|.++|.. ...+++..+..++.||+.||.|||++ |||||||||+|||++.+|.+||+|||+|+....
T Consensus 83 ~ivmE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~-~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHC-CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 999999999999999975 35689999999999999999999999 999999999999999999999999999987654
Q ss_pred C--CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHH---HhhccccccccccccCCCChHHH
Q 011353 209 G--RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL---IRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 209 ~--~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
. ....||+.|+|||++.. ..++.++|||||||++|||+||+.||....... +...... ....++...+
T Consensus 160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~------~~~~~~~~~s 233 (364)
T d1omwa3 160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT------MAVELPDSFS 233 (364)
T ss_dssp SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSS------CCCCCCSSSC
T ss_pred CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc------CCCCCCCCCC
Confidence 3 34578999999999975 468999999999999999999999986542111 1111110 1122344567
Q ss_pred HHHHHHHHHhccCCCCCCCC-----hHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps-----~~~il~~ 309 (488)
+++.+||.+||+.||.+||| +.++++|
T Consensus 234 ~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 234 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp HHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred HHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 88999999999999999999 6888876
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-51 Score=386.80 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=205.5
Q ss_pred CcccccccCCCCCCCeEEEEEeCC--------CCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCC
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 126 (488)
++|++++.||+|+||.||+|+... +..||||+++..... ....+.+|+..+.++ +|||||+++++|.+++
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 578889999999999999998422 247999999865533 346788999999998 7999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
..++||||+++|+|.++|.... ...+++..++.++.||+.||+|||+. ++|||||||+|||++.+
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~-~ivHrDiKp~NiLl~~~ 171 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED 171 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTT
T ss_pred eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC-CEEeeeecccceeecCC
Confidence 9999999999999999996432 24589999999999999999999999 99999999999999999
Q ss_pred CCeeeecCCCccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHh-CCCCCCchhhHHHhhccc
Q 011353 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (488)
+.+||+|||+++..... ....+|+.|+|||.+.++.++.++|||||||++|||+| |..||.....+....
T Consensus 172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~--- 248 (299)
T d1fgka_ 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--- 248 (299)
T ss_dssp CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH---
T ss_pred CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHH---
Confidence 99999999998865432 23457889999999999999999999999999999998 566665443332221
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
.+........+...++++.+|+.+||+.||.+|||+.+|++.|+.+..
T Consensus 249 --~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 249 --LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp --HHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 111122223445567889999999999999999999999999998864
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-51 Score=388.03 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=202.0
Q ss_pred ccCCCCCCCeEEEEEeCC----CCEEEEEEcCCCC-CccHHHHHHHHHHHhccCCCCcccEEEEEee-CCeeEEEEecCC
Q 011353 63 SEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEYMP 136 (488)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~E~~~ 136 (488)
+.||+|+||+||+|.+.+ ...||||+++... ....++|.+|+.+|++++||||++++|++.+ .+..++|||||+
T Consensus 33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~ 112 (311)
T d1r0pa_ 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112 (311)
T ss_dssp EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence 457999999999999533 2368999997543 2345679999999999999999999999876 457899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC-------
Q 011353 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------- 209 (488)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~------- 209 (488)
+|+|.+++.. ....+++..++.++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 113 ~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~-~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~ 190 (311)
T d1r0pa_ 113 HGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 190 (311)
T ss_dssp TCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred cCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhccc-CcccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence 9999999865 344688999999999999999999999 9999999999999999999999999999865432
Q ss_pred -CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHHHHHHHH
Q 011353 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (488)
Q Consensus 210 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (488)
....+|+.|+|||.+.+..++.++|||||||++|||+||+.||........ ....+........+..+++.+.+|
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~----~~~~i~~g~~~~~p~~~~~~l~~l 266 (311)
T d1r0pa_ 191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITVYLLQGRRLLQPEYCPDPLYEV 266 (311)
T ss_dssp TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH----HHHHHHcCCCCCCcccCcHHHHHH
Confidence 223568899999999999999999999999999999998888765421110 001111111222344566789999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHhhhcC
Q 011353 289 ASRCLQYEPRERPNPRSLVTALVTLQKD 316 (488)
Q Consensus 289 i~~cl~~~p~~Rps~~~il~~L~~~~~~ 316 (488)
|.+||+.||++|||+.+|+++|+.+...
T Consensus 267 i~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 267 MLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999764
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-51 Score=386.61 Aligned_cols=246 Identities=19% Similarity=0.197 Sum_probs=193.9
Q ss_pred ccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCcc-----HHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
.|+.||+|+||+||+|. ..+|+.||||+++...... .+.+.+|+.+|+.++|||||++++++.+.+..+|||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 45678999999999999 4679999999997543221 24688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+.++++..++. .+..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhcc-ceecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 99987776654 345689999999999999999999998 9999999999999999999999999999765443 2
Q ss_pred ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc--------ccccccc------cccC
Q 011353 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------IQTLTDS------CLEG 275 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--------~~~~~~~------~~~~ 275 (488)
...+|+.|+|||++.+. .++.++|||||||++|||+||..||.+.......... .....+. ....
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 34689999999998755 5799999999999999999999888754322111000 0000000 0000
Q ss_pred ---CC-----ChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 276 ---QF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 276 ---~~-----~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.. ....++++.+|+.+||+.||++|||+.|+++|
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 00 12345789999999999999999999999886
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-50 Score=386.63 Aligned_cols=254 Identities=20% Similarity=0.297 Sum_probs=208.3
Q ss_pred CcccccccCCCCCCCeEEEEEe------CCCCEEEEEEcCCCCCc-cHHHHHHHHHHHhcc-CCCCcccEEEEEeeCCee
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 128 (488)
+++++.+.||+|+||.||+|++ .+++.||||+++..... ....|.+|+.++..+ +|||||++++++.+.+..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 4677888899999999999984 34678999999865433 345689999999999 699999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWE----------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (488)
++|||||++|+|.+++.... ...+++..+..++.||+.||.|||++ ++|||||||+|||++.+
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~-~ivHrDLKp~NIl~~~~ 181 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG 181 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEETT
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-Ceeeccccccccccccc
Confidence 99999999999999997532 23589999999999999999999999 99999999999999999
Q ss_pred CCeeeecCCCccccCCCC------ccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCC-chhhHHHhhccc
Q 011353 193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNI 265 (488)
Q Consensus 193 ~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~-~~~~~~~~~~~~ 265 (488)
+.+|++|||+++...... ...+|+.|+|||++.++.++.++|||||||++|||+|++.||. ....... .
T Consensus 182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~----~ 257 (311)
T d1t46a_ 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----F 257 (311)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH----H
T ss_pred CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH----H
Confidence 999999999998765432 2356899999999999999999999999999999999555543 3211110 1
Q ss_pred cccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
..++........+...+..+.+||.+||+.||.+|||+.+|++.|+++..
T Consensus 258 ~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 11111222223344567889999999999999999999999999987654
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-50 Score=383.81 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=207.5
Q ss_pred CcccccccCCCCCCCeEEEEEeC------CCCEEEEEEcCCCCCc-cHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeE
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 129 (488)
+++++++.||+|+||+||+|.+. ++..||||+++..... ....|.+|+.++++++|||||++++++...+..+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 56778889999999999999853 2578999999764332 2346899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCC
Q 011353 130 LVAEYMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (488)
Q Consensus 130 lv~E~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfG 201 (488)
+||||+++|+|.+++... ....+++..+.+++.|++.||.|||++ +|+||||||+|||++.++++||+|||
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~-~ivHrDlk~~NiLld~~~~~Kl~DFG 178 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG 178 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeeceEcCCceeecCCceEEEeecc
Confidence 999999999999998642 123578999999999999999999998 99999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCC-CCchhhHHHhhcccccccccccc
Q 011353 202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRDRNIQTLTDSCLE 274 (488)
Q Consensus 202 la~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
+++..... ....+|+.|+|||.+.+..++.++|||||||++|||+||..+ +............ .+ ...
T Consensus 179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i----~~-~~~ 253 (308)
T d1p4oa_ 179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV----ME-GGL 253 (308)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH----HT-TCC
T ss_pred cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHH----Hh-CCC
Confidence 99865432 233568999999999999999999999999999999999644 4433222221111 11 111
Q ss_pred CCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
...+..++..+.++|.+||+.+|++|||+.+|+++|+...+
T Consensus 254 ~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 22344566789999999999999999999999999987644
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-50 Score=380.23 Aligned_cols=251 Identities=18% Similarity=0.237 Sum_probs=199.7
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
++|+++++||+|+||+||+|. ..+|+.||||+++.... ....++.+|+.+|++++|||||++++++.+.+..++|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 468889999999999999999 46789999999975432 235679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
|+.+ ++.+++.......+++..+..++.||+.||.|||++ |||||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~-~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~ 159 (298)
T d1gz8a_ 82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159 (298)
T ss_dssp CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC-CEEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence 9976 455555544556799999999999999999999998 9999999999999999999999999999765432
Q ss_pred CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc------ccc-----cccc-ccccCC
Q 011353 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR------NIQ-----TLTD-SCLEGQ 276 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~------~~~-----~~~~-~~~~~~ 276 (488)
....+|+.|+|||++.... ++.++|||||||++|+|++|+.||.+......... ... .... ......
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence 3446899999999987665 57899999999999999999999875432111000 000 0000 000000
Q ss_pred -----------CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 277 -----------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 277 -----------~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.....+.++.+|+.+||+.||.+|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 011345789999999999999999999999987
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-50 Score=379.78 Aligned_cols=252 Identities=15% Similarity=0.203 Sum_probs=193.5
Q ss_pred ccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHH--HHHHhccCCCCcccEEEEEeeCC----eeEEEE
Q 011353 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEE--ARAVGQLRNRRLANLLGCCCEGD----ERLLVA 132 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e--~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 132 (488)
+.+.++||+|+||+||+|++ +|+.||||+++.. ..+.+.+| +..+..++|||||++++++.+.+ ..++||
T Consensus 5 ~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 44556789999999999997 5779999999643 23444444 44556789999999999998754 579999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCcccccccCcceeeCCCCCeeeecCCCccc
Q 011353 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (488)
Q Consensus 133 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~ 205 (488)
||+++|+|.++|.+ ..++|..+++++.|++.||.|||+. .+||||||||+|||++.++.+||+|||+++.
T Consensus 81 Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~ 157 (303)
T d1vjya_ 81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred ecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccc
Confidence 99999999999964 3599999999999999999999962 3899999999999999999999999999886
Q ss_pred cCCC--------CccccCCCCCCccccccCC------CCCCccchhhHHHHHHHHhCCCCCCchhh--------------
Q 011353 206 SRDG--------RSYSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPSHAL-------------- 257 (488)
Q Consensus 206 ~~~~--------~~~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------------- 257 (488)
.... ....||+.|+|||++.+.. ++.++|||||||+||||+||..|+.....
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T d1vjya_ 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccch
Confidence 5332 2356899999999987642 56789999999999999999866532110
Q ss_pred -HHHhhccccccccccccCC-CChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 258 -DLIRDRNIQTLTDSCLEGQ-FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 258 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
.............+..... .+......+.+|+.+||+.||++|||+.+|++.|+++....
T Consensus 238 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 299 (303)
T d1vjya_ 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence 0011100111111111011 12235567999999999999999999999999999987654
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.3e-49 Score=375.56 Aligned_cols=250 Identities=16% Similarity=0.211 Sum_probs=200.9
Q ss_pred CcccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEec
Q 011353 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 134 (488)
++|+++++||+|+||+||+|...+|+.||||+++.... ....++.+|+.+|++++|||||++++++.+.+..+++|||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 47889999999999999999988899999999976532 2256799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----C
Q 011353 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (488)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~----~ 210 (488)
+.++.+..+... .+.+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||++...... .
T Consensus 82 ~~~~~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (286)
T d1ob3a_ 82 LDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (286)
T ss_dssp CSEEHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred ehhhhHHHHHhh--cCCcchhhhHHHHHHHHHHHHHhccC-cEEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence 988766666543 45699999999999999999999998 9999999999999999999999999998765433 3
Q ss_pred ccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-----------c---cccc------
Q 011353 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------I---QTLT------ 269 (488)
Q Consensus 211 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~---~~~~------ 269 (488)
...+++.|+|||.+.+. .++.++|||||||++|||++|+.||.+.......... . ....
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T d1ob3a_ 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (286)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence 34578999999999765 4789999999999999999999998654211110000 0 0000
Q ss_pred ---cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 ---DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 ---~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
............++.+.+|+.+||+.||++|||++++++|
T Consensus 239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000011223356789999999999999999999999876
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=378.46 Aligned_cols=238 Identities=18% Similarity=0.268 Sum_probs=198.7
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc------cHHHHHHHHHHHhccC--CCCcccEEEEEeeCCe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~ 127 (488)
++|++.+.||+|+||+||+|. ..+|+.||||+++..... ...++.+|+.+|++++ |||||++++++.+.+.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 368888899999999999999 467899999998643211 1234678999999996 8999999999999999
Q ss_pred eEEEEecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-CCCeeeecCCCccc
Q 011353 128 RLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKN 205 (488)
Q Consensus 128 ~~lv~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~DfGla~~ 205 (488)
.++||||+.+ +++.+++.. ...+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.+||+|||+++.
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEEeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCcccceEEecCCCeEEECcccccee
Confidence 9999999976 678888864 35699999999999999999999999 9999999999999984 57999999999986
Q ss_pred cCCC--CccccCCCCCCccccccCCC-CCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCChHHH
Q 011353 206 SRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (488)
Q Consensus 206 ~~~~--~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (488)
.... ....||+.|+|||++.+..+ +.++|||||||++|||+||+.||..... +.... ..++...+
T Consensus 161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--i~~~~----------~~~~~~~s 228 (273)
T d1xwsa_ 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRGQ----------VFFRQRVS 228 (273)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHCC----------CCCSSCCC
T ss_pred cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--Hhhcc----------cCCCCCCC
Confidence 5543 45678999999999987765 5678999999999999999998875421 11111 11233456
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 283 ~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
+++.+|+.+||+.||++|||+.++++|
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 789999999999999999999999886
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-49 Score=376.25 Aligned_cols=255 Identities=18% Similarity=0.196 Sum_probs=198.6
Q ss_pred CcccccccCCCCCCCeEEEEEe-CC-CCEEEEEEcCCCC--CccHHHHHHHHHHHhcc---CCCCcccEEEEEee-----
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-EN-QFRIAVKRFNRSA--WPDARQFLEEARAVGQL---RNRRLANLLGCCCE----- 124 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~----- 124 (488)
.+|+++++||+|+||+||+|.. .+ ++.||||+++... ......+.+|+.+|+.| +||||++++++|..
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~ 86 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 86 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence 5789999999999999999995 44 6679999986432 12233466788877766 79999999999853
Q ss_pred CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 125 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
....+++|||+.++++..... .....+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+++
T Consensus 87 ~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ivHrDiKp~NILi~~~~~~kl~dfg~~~ 164 (305)
T d1blxa_ 87 ETKLTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR 164 (305)
T ss_dssp EEEEEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecCCCccEEEEcCCCCeeecchhhhh
Confidence 346899999998876654443 3456699999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc--------cccc----
Q 011353 205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------QTLT---- 269 (488)
Q Consensus 205 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------~~~~---- 269 (488)
..... ....||+.|+|||++.+..++.++||||+||++|||+||+.||.+........... ..+.
T Consensus 165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (305)
T d1blxa_ 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244 (305)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred hhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccccc
Confidence 65433 45678999999999999999999999999999999999999987643221110000 0000
Q ss_pred ---------cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhh
Q 011353 270 ---------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTL 313 (488)
Q Consensus 270 ---------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~ 313 (488)
.......+....++.+.+|+.+||+.||++|||+.++++| ++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i 299 (305)
T d1blxa_ 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 299 (305)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred chhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence 0000011223456789999999999999999999999987 4444
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-47 Score=372.42 Aligned_cols=251 Identities=17% Similarity=0.249 Sum_probs=196.2
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeCC------e
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 127 (488)
..|+++++||+|+||+||+|. ..+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|...+ .
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 468899999999999999999 467999999999864332 2457899999999999999999999997654 4
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
.++||||+ +.+|..++.. ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~-~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~ 172 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 172 (346)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCcchhhcccccccccccccceeccC
Confidence 69999999 6678887753 4699999999999999999999999 99999999999999999999999999998765
Q ss_pred CC-CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc----------------------
Q 011353 208 DG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR---------------------- 263 (488)
Q Consensus 208 ~~-~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~---------------------- 263 (488)
.. ....+|+.|+|||++.+. .++.++||||+||++|+|++|+.||...........
T Consensus 173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T d1cm8a_ 173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252 (346)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence 54 446789999999999864 478999999999999999999988865421111000
Q ss_pred ----cccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhh
Q 011353 264 ----NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTL 313 (488)
Q Consensus 264 ----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~ 313 (488)
.......... .......++++.+|+.+||..||.+|||+.++++| ++.+
T Consensus 253 ~~~~~~~~~~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~ 307 (346)
T d1cm8a_ 253 NYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 307 (346)
T ss_dssp HHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hhhccCCcccccch-HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence 0000000000 01123356789999999999999999999999997 4444
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-48 Score=372.61 Aligned_cols=248 Identities=17% Similarity=0.218 Sum_probs=193.0
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC-ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCe----eEEE
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----RLLV 131 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----~~lv 131 (488)
+|++++.||+|+||+||+|. ..+|+.||||+++.... ...+.+++|+.+|++++||||+++++++..... .+++
T Consensus 9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l 88 (345)
T d1pmea_ 9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL 88 (345)
T ss_dssp TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence 58999999999999999998 56899999999976442 235578999999999999999999999976532 3455
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC--
Q 011353 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (488)
Q Consensus 132 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~-- 209 (488)
++|+.+|+|.+++.. +.+++..+..++.||+.||+|||++ |||||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~-~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~ 164 (345)
T d1pmea_ 89 VTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 164 (345)
T ss_dssp EEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred EEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence 566779999999964 3599999999999999999999999 9999999999999999999999999998764332
Q ss_pred -----CccccCCCCCCcccccc-CCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccc---------------
Q 011353 210 -----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL--------------- 268 (488)
Q Consensus 210 -----~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--------------- 268 (488)
....+|+.|+|||++.. ..++.++||||+||++|+|++|+.||................
T Consensus 165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T d1pmea_ 165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 244 (345)
T ss_dssp BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhh
Confidence 33457899999999854 457889999999999999999999986542211110000000
Q ss_pred -----ccccccCC-----CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 -----TDSCLEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 -----~~~~~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
........ .....+.++.+|+.+||+.||.+|||+.++++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000000 112245679999999999999999999999987
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-47 Score=365.99 Aligned_cols=252 Identities=15% Similarity=0.171 Sum_probs=195.3
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCC--CccHHHHHHHHHHHhccCCCCcccEEEEEee-------
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE------- 124 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 124 (488)
..++|+++++||+|+||+||+|.. .+|+.||||++.... .....++.+|+.+|+.++||||+++++++..
T Consensus 8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~ 87 (318)
T d3blha1 8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 87 (318)
T ss_dssp BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred ccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccc
Confidence 357889999999999999999994 679999999986542 2335678999999999999999999999855
Q ss_pred -CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCc
Q 011353 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (488)
Q Consensus 125 -~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla 203 (488)
.+..++||||+.++++..... ....+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 88 ~~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~-~ivHrDlKp~NILl~~~~~~kl~dfg~~ 164 (318)
T d3blha1 88 CKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA 164 (318)
T ss_dssp ---CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccC-CEEecCcCchheeecCCCcEEeeeccee
Confidence 346899999998876665543 345689999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCC--------CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcc-------ccc
Q 011353 204 KNSRDG--------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------IQT 267 (488)
Q Consensus 204 ~~~~~~--------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------~~~ 267 (488)
+..... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.......... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 244 (318)
T d3blha1 165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 244 (318)
T ss_dssp EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence 754422 234689999999999865 5899999999999999999999888654222111100 000
Q ss_pred cccc------------cccCCCC-------hHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 268 LTDS------------CLEGQFS-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 268 ~~~~------------~~~~~~~-------~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.... ......+ ...++.+.+|+.+||+.||++|||++++++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp TSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 0000 0000000 0124578899999999999999999999987
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-47 Score=371.23 Aligned_cols=253 Identities=20% Similarity=0.214 Sum_probs=195.3
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcccEEEEEeeC------CeeEE
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERLL 130 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~l 130 (488)
+|+.++.||+|+||+||+|+. .+|+.||||++..... .+.+|+.+|++++||||++++++|... .+++|
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 567778889999999999995 5799999999976432 234799999999999999999998543 34789
Q ss_pred EEecCCCCCHHhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-CeeeecCCCccccCC
Q 011353 131 VAEYMPNDTLAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD 208 (488)
Q Consensus 131 v~E~~~~gsL~~~l~-~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~DfGla~~~~~ 208 (488)
||||++++.+..+.. ......+++..+..++.||+.||+|||++ ||+||||||+|||++.++ .+||+|||+++....
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 999998764333322 12345799999999999999999999998 999999999999999775 899999999987544
Q ss_pred C---CccccCCCCCCccccccC-CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhc---------------------
Q 011353 209 G---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR--------------------- 263 (488)
Q Consensus 209 ~---~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--------------------- 263 (488)
. ....+|+.|+|||.+.+. .++.++||||+||++|||++|+.||...........
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 3 345689999999988754 689999999999999999999998865422111000
Q ss_pred --cccccccccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH--HHhhhc
Q 011353 264 --NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQK 315 (488)
Q Consensus 264 --~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~~~~ 315 (488)
..................++++.+|+.+||+.||++|||+.|+++| ++.+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence 0000000000111223456789999999999999999999999987 555543
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-47 Score=360.21 Aligned_cols=250 Identities=16% Similarity=0.193 Sum_probs=202.9
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCC--ccHHHHHHHHHHHhccCCCCcccEEEEEeeCCeeEEEEe
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 133 (488)
.+|+++++||+|+||+||+|+ ..+++.||||+++.... ....++.+|+.+|+.++||||+++++++.+....++|+|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 478999999999999999999 46789999999975433 235679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCCC----
Q 011353 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (488)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~~---- 209 (488)
++.+++|..++.. .+.+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.++.....
T Consensus 82 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~q~~~aL~~lH~~-~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~ 158 (292)
T d1unla_ 82 FCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSEEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred ecccccccccccc--ccccchhHHHHHHHHHHHHHHHhhcC-CEeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence 9999988887764 45689999999999999999999998 9999999999999999999999999999875543
Q ss_pred CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhh-H-HHhh------c----c---ccccc----
Q 011353 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHAL-D-LIRD------R----N---IQTLT---- 269 (488)
Q Consensus 210 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~-~~~~------~----~---~~~~~---- 269 (488)
....+++.|+|||++.+.. ++.++|||||||++|||++|+.||..... . .... . . .....
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 2335678899999988765 68999999999999999999988643211 1 0000 0 0 00000
Q ss_pred -----cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 270 -----DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 270 -----~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
............++.+.+|+.+||+.||.+|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000111223456789999999999999999999999887
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3.3e-47 Score=366.31 Aligned_cols=246 Identities=17% Similarity=0.201 Sum_probs=197.6
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEeeC--CeeEE
Q 011353 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEG--DERLL 130 (488)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~l 130 (488)
+.++|+++++||+|+||+||+|+. .+++.||||+++.. ..+++.+|+.+|+.++ ||||+++++++... ...++
T Consensus 33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~ 109 (328)
T d3bqca1 33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 109 (328)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence 345789999999999999999994 67999999999753 3567899999999995 99999999999754 56899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCC-CeeeecCCCccccCCC
Q 011353 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG 209 (488)
Q Consensus 131 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~DfGla~~~~~~ 209 (488)
||||+.+++|..+. +.+++..+..++.||+.||.|||++ |||||||||+|||++.++ .+||+|||+++.....
T Consensus 110 v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~-gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~ 183 (328)
T d3bqca1 110 VFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 183 (328)
T ss_dssp EEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred EEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhc-ccccccccccceEEcCCCCeeeecccccceeccCC
Confidence 99999999998765 3599999999999999999999999 999999999999998655 5999999999876543
Q ss_pred ---CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHH------------------hhcc---
Q 011353 210 ---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLI------------------RDRN--- 264 (488)
Q Consensus 210 ---~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~------------------~~~~--- 264 (488)
....+|+.|+|||.+.+.. ++.++||||+||++++|++|+.||........ ....
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 263 (328)
T d3bqca1 184 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 263 (328)
T ss_dssp CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccccc
Confidence 4456789999999988754 79999999999999999999988854311100 0000
Q ss_pred ---ccccc--------cccccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 265 ---IQTLT--------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 265 ---~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... ............++++.+||.+||..||.+|||++++++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp CGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000 0001111223356789999999999999999999999986
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=6.9e-47 Score=357.34 Aligned_cols=250 Identities=16% Similarity=0.157 Sum_probs=203.0
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCC-CCcccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~E~~ 135 (488)
.|++++.||+|+||+||+|+ ..+|+.||||+++... ....+.+|++.+..++| +|++.+++++.+....++||||+
T Consensus 6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 57888999999999999999 4578999999986543 23347789999999965 89999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCC-----CCCeeeecCCCccccCCC-
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----DVNPRLSCFGLMKNSRDG- 209 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-----~~~~kl~DfGla~~~~~~- 209 (488)
+++|.+++... ...+++..+..++.|++.||+|||++ |||||||||+|||++. ++.+||+|||+++.....
T Consensus 84 -~~~l~~~~~~~-~~~~~~~~~~~i~~q~~~~l~~lH~~-giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 84 -GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHhh-ccchhhHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 67999988653 45699999999999999999999999 9999999999999964 578999999999864321
Q ss_pred ----------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhh----HH---Hhhcccccccccc
Q 011353 210 ----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DL---IRDRNIQTLTDSC 272 (488)
Q Consensus 210 ----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~---~~~~~~~~~~~~~ 272 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||..... .. +...... ....
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~- 238 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS-TPLR- 238 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH-SCHH-
T ss_pred cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCC-CChH-
Confidence 234689999999999999999999999999999999999998864211 11 1111100 0000
Q ss_pred ccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhcCC
Q 011353 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (488)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~~~ 317 (488)
......++++.+++..|+..+|++||+++.+.+.|+.+....
T Consensus 239 ---~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~ 280 (293)
T d1csna_ 239 ---ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 280 (293)
T ss_dssp ---HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ---HhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence 111234578999999999999999999999999988875443
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.2e-47 Score=360.04 Aligned_cols=251 Identities=15% Similarity=0.146 Sum_probs=196.3
Q ss_pred cccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCC-cccEEEEEeeCCeeEEEEecC
Q 011353 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLVAEYM 135 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~E~~ 135 (488)
+|++++.||+|+||+||+|.. .+|+.||||++..... ..++.+|+++++.++|+| |+.+.+++.+.+..++||||+
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 588999999999999999994 6789999999876442 235789999999997665 555566667888899999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeC---CCCCeeeecCCCccccCCC---
Q 011353 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG--- 209 (488)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~DfGla~~~~~~--- 209 (488)
+++|.+.+.. ..+.+++..+..++.|++.||+|||++ |||||||||+|||++ .+..+||+|||+++.....
T Consensus 86 -~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 86 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred -CCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 4567776654 345699999999999999999999999 999999999999875 4567999999999865432
Q ss_pred --------CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhh----ccccccccccccCCC
Q 011353 210 --------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD----RNIQTLTDSCLEGQF 277 (488)
Q Consensus 210 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~ 277 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... ........+ ....
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 240 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP--IEVL 240 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSC--HHHH
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCC--hhHh
Confidence 23468999999999999899999999999999999999999886532111100 000000000 0011
Q ss_pred ChHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHhhhc
Q 011353 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (488)
Q Consensus 278 ~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~~~~ 315 (488)
...+++++.+++..||+.+|++||++.++.+.|+.+..
T Consensus 241 ~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence 22355789999999999999999999999888887643
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-48 Score=367.24 Aligned_cols=249 Identities=17% Similarity=0.201 Sum_probs=201.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe----CCCCEEEEEEcCCCC----CccHHHHHHHHHHHhccCC-CCcccEEEEEeeCC
Q 011353 56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRN-RRLANLLGCCCEGD 126 (488)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~ 126 (488)
.++|++++.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+.+|++++| |||+++++++.+..
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence 45789999999999999999984 247899999987532 1234568899999999966 89999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCcccc
Q 011353 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (488)
Q Consensus 127 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~ 206 (488)
..++||||+.+|+|.+++.. .+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~ 179 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 179 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred ceeeeeecccccHHHHHHHh--cccccHHHHHHHHHHHHHHHHHhhcC-CEEeccCCccceeecCCCCEEEeeccchhhh
Confidence 99999999999999999975 34578899999999999999999999 9999999999999999999999999999765
Q ss_pred CCC-----CccccCCCCCCccccccC--CCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccccccccccccCCCCh
Q 011353 207 RDG-----RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (488)
Q Consensus 207 ~~~-----~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
... ....+++.|++||.+.+. .++.++|||||||+||||+||+.||.................. ....++.
T Consensus 180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~--~~~~~~~ 257 (322)
T d1vzoa_ 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQ 257 (322)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCT
T ss_pred cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc--CCCCCcc
Confidence 432 345678999999999765 3788999999999999999999998654221111111111100 1122345
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----hHHHHHH
Q 011353 280 DEGTELVRLASRCLQYEPRERPN-----PRSLVTA 309 (488)
Q Consensus 280 ~~~~~l~~li~~cl~~~p~~Rps-----~~~il~~ 309 (488)
..+.++.+|+.+||+.||.+||| ++++++|
T Consensus 258 ~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 258 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence 57789999999999999999995 7888875
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-46 Score=363.32 Aligned_cols=247 Identities=16% Similarity=0.186 Sum_probs=189.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-CCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEee------CCe
Q 011353 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE------GDE 127 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 127 (488)
.+|++++.||+|+||+||+|.. .+|+.||||+++..... ...++.+|+.+|++++|||||+++++|.. ...
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 4689999999999999999994 57999999999765432 34568999999999999999999999964 367
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccC
Q 011353 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (488)
Q Consensus 128 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~ 207 (488)
+|+||||+.++ +.+.+. ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+|++|||+++...
T Consensus 97 ~~iv~Ey~~~~-l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~-giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~ 170 (355)
T d2b1pa1 97 VYLVMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_dssp EEEEEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred eEEEEeccchH-HHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhc-ccccccCCccccccccccceeeechhhhhccc
Confidence 89999999775 445552 3589999999999999999999999 99999999999999999999999999987654
Q ss_pred CC---CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhccc-------------------
Q 011353 208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------------------- 265 (488)
Q Consensus 208 ~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------------------- 265 (488)
.. ....+|+.|+|||++.+..++.++||||+||++++|++|+.||.+...........
T Consensus 171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 250 (355)
T d2b1pa1 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_dssp ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence 43 34567999999999999999999999999999999999998886542111100000
Q ss_pred --------------cccccccccC---CCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 266 --------------QTLTDSCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 266 --------------~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.......... ......+.++.+|+.+||..||++|||+.++++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000 0112357789999999999999999999999988
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-46 Score=363.81 Aligned_cols=249 Identities=16% Similarity=0.210 Sum_probs=194.8
Q ss_pred CcccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCc--cHHHHHHHHHHHhccCCCCcccEEEEEeeC-----Cee
Q 011353 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER 128 (488)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 128 (488)
.+|++++.||+|+||+||+|. ..+|+.||||+++..... ..+++.+|+.+|+.++|||||++++++... ...
T Consensus 18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~ 97 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 97 (348)
T ss_dssp TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence 368999999999999999999 567999999999865432 345688999999999999999999998643 334
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCCccccCC
Q 011353 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (488)
Q Consensus 129 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGla~~~~~ 208 (488)
++|++|+.+|+|.+++. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+|++|||++.....
T Consensus 98 ~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~-giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~ 173 (348)
T d2gfsa1 98 VYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173 (348)
T ss_dssp CEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred EEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCCccccccccccccccccchhcccCc
Confidence 66777888999999995 34699999999999999999999999 999999999999999999999999999876544
Q ss_pred C-CccccCCCCCCccccccCC-CCCCccchhhHHHHHHHHhCCCCCCchhhHHHhhcccccc------------------
Q 011353 209 G-RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL------------------ 268 (488)
Q Consensus 209 ~-~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~------------------ 268 (488)
. ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+..............
T Consensus 174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
T d2gfsa1 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253 (348)
T ss_dssp GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence 3 4456789999999877654 6889999999999999999999987542211110000000
Q ss_pred -ccccc-cCC-----CChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 269 -TDSCL-EGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 269 -~~~~~-~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
..... ... .....++++.+||.+||+.||.+|||+.++++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 00000 000 011245789999999999999999999999987
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.1e-40 Score=325.33 Aligned_cols=251 Identities=16% Similarity=0.196 Sum_probs=190.3
Q ss_pred cccccccCCCCCCCeEEEEE-eCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-----------CCCcccEEEEEee-
Q 011353 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----------NRRLANLLGCCCE- 124 (488)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~~- 124 (488)
+|+++++||+|+||+||+|+ ..+|+.||||+++... ...+.+.+|+.+++.++ |+||+++++++..
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 58999999999999999999 4679999999998543 22456788999888875 4789999988864
Q ss_pred -CCeeEEEEecCCCCC-HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCC------ee
Q 011353 125 -GDERLLVAEYMPNDT-LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN------PR 196 (488)
Q Consensus 125 -~~~~~lv~E~~~~gs-L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~------~k 196 (488)
....+++++++..+. ............+++..+..++.||+.||.|||+..||+||||||+|||++.++. ++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k 172 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 172 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceee
Confidence 345666777655543 3333333445678999999999999999999998339999999999999976553 99
Q ss_pred eecCCCccccCCC-CccccCCCCCCccccccCCCCCCccchhhHHHHHHHHhCCCCCCchhhH-------HH--------
Q 011353 197 LSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-------LI-------- 260 (488)
Q Consensus 197 l~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-------~~-------- 260 (488)
++|||.+...... ....+|+.|+|||++.+..++.++||||+||++++|++|+.||...... ..
T Consensus 173 l~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg 252 (362)
T d1q8ya_ 173 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 252 (362)
T ss_dssp ECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC
T ss_pred EeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhC
Confidence 9999998865443 4556899999999999999999999999999999999999887532110 00
Q ss_pred -------hhcc-cc------ccccc-------------cccCCCChHHHHHHHHHHHHhccCCCCCCCChHHHHHH
Q 011353 261 -------RDRN-IQ------TLTDS-------------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (488)
Q Consensus 261 -------~~~~-~~------~~~~~-------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 309 (488)
.... .. ..... ..........++++.+|+.+||..||.+|||++++++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 253 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000 00 00000 00112345678899999999999999999999999987
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=3.4e-25 Score=194.39 Aligned_cols=162 Identities=15% Similarity=0.096 Sum_probs=119.2
Q ss_pred ccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCc------------------cHHHHHHHHHHHhccCCCCcccEEEEE
Q 011353 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP------------------DARQFLEEARAVGQLRNRRLANLLGCC 122 (488)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~h~niv~l~~~~ 122 (488)
+-++||+|+||+||+|...+|+.||||+++..... ......+|...+.++.|.+++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 44678999999999999888999999987632110 012345688899999999999988664
Q ss_pred eeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccCcceeeCCCCCeeeecCCC
Q 011353 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (488)
Q Consensus 123 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~DfGl 202 (488)
. .+++|||+++..+.+ ++......++.|++.+|.|||++ |++||||||+|||++++ .++|+|||+
T Consensus 84 ~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~-giiHrDiKP~NILv~~~-~~~liDFG~ 148 (191)
T d1zara2 84 G----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLVSEE-GIWIIDFPQ 148 (191)
T ss_dssp T----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEETT-EEEECCCTT
T ss_pred C----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhC-CEEEccCChhheeeeCC-CEEEEECCC
Confidence 2 379999998865433 33344568899999999999998 99999999999999865 489999999
Q ss_pred ccccCCCCccccCCCCCCc------cccccCCCCCCccchhhHHHH
Q 011353 203 MKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLL 242 (488)
Q Consensus 203 a~~~~~~~~~~~~~~y~aP------E~~~~~~~~~~~Dv~slG~~l 242 (488)
|......... .|... +.+ ...++.++|+||+.--+
T Consensus 149 a~~~~~~~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 149 SVEVGEEGWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CEETTSTTHH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred cccCCCCCcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 8766433211 11110 111 25578899999976544
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=1.1e-19 Score=145.22 Aligned_cols=104 Identities=23% Similarity=0.332 Sum_probs=100.1
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+.++..+|+.+++.|+|++|+..|+++|+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 3567789999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccccccc
Q 011353 461 LFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+..+|++++|+.+|++|++++|++.
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~ 105 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNP 105 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999764
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.78 E-value=4.1e-19 Score=156.23 Aligned_cols=104 Identities=21% Similarity=0.352 Sum_probs=100.0
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..+++.|+.+++.|+|++|+..|++||+++|+ ++.+|+++|.||.++|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccccccc
Q 011353 461 LFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|..+|++++|+.+|++|++++|+..
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~ 106 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQR 106 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccH
Confidence 9999999999999999999998643
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=1.2e-18 Score=147.38 Aligned_cols=107 Identities=24% Similarity=0.348 Sum_probs=102.8
Q ss_pred hhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHH
Q 011353 378 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 457 (488)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (488)
.++.+..+..+|+.+++.|+|++|+..|++||+++|+ +..+|+++|.||..+|++++|+.+|++||+++|+++.+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 4567888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 458 AAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|.++..+|++++|+.+|+++++++|.+.
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~ 112 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDK 112 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999999998653
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.72 E-value=1.8e-17 Score=138.83 Aligned_cols=109 Identities=19% Similarity=0.198 Sum_probs=99.6
Q ss_pred hhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC---------------HHHHhhHHHHHHhcCChHHHHHHHH
Q 011353 377 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---------------PTAFARRSLSYLMSDMPQEALNDAS 441 (488)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~ 441 (488)
+.++.+..+..+|+.+|+.|+|++|+..|++||..-+... ..+|+|+|.||.++|++++|+++|+
T Consensus 12 e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~ 91 (153)
T d2fbna1 12 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 91 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhh
Confidence 4556777888999999999999999999999998776521 2478999999999999999999999
Q ss_pred HhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 442 QAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+||+++|+++++|+++|.+|..+|++++|+.+|++|++++|.+.
T Consensus 92 ~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 135 (153)
T d2fbna1 92 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 135 (153)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred ccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999999764
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=4.8e-17 Score=138.81 Aligned_cols=109 Identities=13% Similarity=0.153 Sum_probs=99.9
Q ss_pred hhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC--------------HHHHhhHHHHHHhcCChHHHHHHHHH
Q 011353 377 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS--------------PTAFARRSLSYLMSDMPQEALNDASQ 442 (488)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~~~ 442 (488)
+.++.+..+.++|+.+|+.|+|++|+..|++||+..|... ..+|.++|.||.++|+|++|+.++++
T Consensus 8 ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~ 87 (170)
T d1p5qa1 8 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 87 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhh
Confidence 3455677888999999999999999999999999988621 35788999999999999999999999
Q ss_pred hHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 443 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 443 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
||+++|+++.+|+++|.+|+.+|++++|+.+|++|++++|++.
T Consensus 88 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~ 130 (170)
T d1p5qa1 88 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 130 (170)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred hhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999653
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.69 E-value=4.1e-17 Score=139.28 Aligned_cols=112 Identities=18% Similarity=0.188 Sum_probs=100.7
Q ss_pred hhhhhhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhc----------------CCCCCHHHHhhHHHHHHhcCChHHH
Q 011353 373 QMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV----------------GTMVSPTAFARRSLSYLMSDMPQEA 436 (488)
Q Consensus 373 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A 436 (488)
......+..+..+..+|+.++..|+|++|++.|++||++ +|. ...++.++|.||.++|+|++|
T Consensus 18 ~~~~~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A 96 (169)
T d1ihga1 18 KDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGA 96 (169)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchh
Confidence 334445556677889999999999999999999999854 455 677899999999999999999
Q ss_pred HHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 437 LNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 437 ~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+.+|++||+++|+++.+|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 97 i~~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~ 145 (169)
T d1ihga1 97 VDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 145 (169)
T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhhhhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999999999764
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.68 E-value=1.2e-16 Score=136.04 Aligned_cols=108 Identities=15% Similarity=0.204 Sum_probs=98.2
Q ss_pred hhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC--------------CHHHHhhHHHHHHhcCChHHHHHHHHHh
Q 011353 378 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--------------SPTAFARRSLSYLMSDMPQEALNDASQA 443 (488)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a 443 (488)
.++.+..+.++|+.+++.|+|.+|+..|++||...|.. ...+|.|+|.||..+|++++|+.++++|
T Consensus 11 ~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~a 90 (168)
T d1kt1a1 11 KLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 90 (168)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhh
Confidence 44567788899999999999999999999999765541 2356889999999999999999999999
Q ss_pred HhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 444 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 444 l~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
++++|+++++|+++|.+|..+|+|++|+++|++|++++|++.
T Consensus 91 l~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~ 132 (168)
T d1kt1a1 91 LGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 132 (168)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH
T ss_pred hhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999999764
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.3e-16 Score=129.29 Aligned_cols=102 Identities=15% Similarity=0.161 Sum_probs=94.5
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCch-------HH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH-------MA 453 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-------~a 453 (488)
.+...++.|+.++..|+|++|+..|++||+++|+ +..++.++|.||..+|+|++|+.+|++||+++|++. .+
T Consensus 3 ~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~~ 81 (128)
T d1elra_ 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (128)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4567789999999999999999999999999999 999999999999999999999999999999999885 46
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHccccc
Q 011353 454 AYLQAAALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 454 ~~~~g~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
|+++|.++..++++++|+.+|++++.+++.
T Consensus 82 ~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 111 (128)
T d1elra_ 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (128)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 777888999999999999999999988653
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.65 E-value=4.2e-16 Score=122.92 Aligned_cols=96 Identities=14% Similarity=0.068 Sum_probs=92.3
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 461 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (488)
.+.....|..+++.|++++|+..|+++|+.+|+ +..+|.++|.++..+|++++|+.++++|++++|+++.+|+.+|.+|
T Consensus 16 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y 94 (112)
T d1hxia_ 16 HENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSH 94 (112)
T ss_dssp CSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHH
Confidence 345568899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHHHH
Q 011353 462 FALGKENEAQAALREAS 478 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al 478 (488)
..+|++++|++.|+++|
T Consensus 95 ~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 95 TNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHh
Confidence 99999999999999987
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.60 E-value=2.8e-15 Score=136.71 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=98.8
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
.+..+..+|..++..|+|++|++.|++||+++|+ ++.+|+++|.+|..+|++++|+..|++|++++|+++.+++++|.+
T Consensus 36 ~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 114 (259)
T d1xnfa_ 36 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIA 114 (259)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHHHH
Confidence 3455669999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccccccc
Q 011353 461 LFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|..+|++++|++.|+++++++|.+.
T Consensus 115 ~~~~g~~~~A~~~~~~al~~~p~~~ 139 (259)
T d1xnfa_ 115 LYYGGRDKLAQDDLLAFYQDDPNDP 139 (259)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHhhHHHHHHHHHHHHhhccccH
Confidence 9999999999999999999998643
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=3.1e-15 Score=130.02 Aligned_cols=99 Identities=15% Similarity=0.144 Sum_probs=90.9
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHH
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 460 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (488)
++..+.++|..++..|+|++|++.|+++ .|. ++.+|+++|.+|..+|++++|+++|++||+++|+++.+|+++|.+
T Consensus 4 ~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~ 79 (192)
T d1hh8a_ 4 EAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 79 (192)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 4456678999999999999999999863 555 688999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHccccc
Q 011353 461 LFALGKENEAQAALREASILENK 483 (488)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
|..+|++++|+++|++|++..+.
T Consensus 80 ~~~~g~~~~A~~~~~kAl~~~~~ 102 (192)
T d1hh8a_ 80 YYQTEKYDLAIKDLKEALIQLRG 102 (192)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHhhccHHHHHHHHHHHHHhCcc
Confidence 99999999999999999987653
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=1.5e-15 Score=121.20 Aligned_cols=98 Identities=9% Similarity=-0.014 Sum_probs=89.7
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc---CChHHHHHHHHHhHhhCCCc--hHHHHHHHHHH
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS---DMPQEALNDASQAQVISPVW--HMAAYLQAAAL 461 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~---~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~ 461 (488)
+.++.+...+++++|.+.|++||.++|+ +..+++++|.|+.+. +++++|+..++++++.+|+. +.+++++|.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 4577889999999999999999999999 999999999999874 45667999999999999866 56999999999
Q ss_pred HHCCCHHHHHHHHHHHHccccccc
Q 011353 462 FALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 462 ~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+.+|+|++|+++|+++|+++|++.
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~~ 106 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQNN 106 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhhhHHHHHHHHHHHHhCcCCH
Confidence 999999999999999999999764
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.1e-14 Score=126.50 Aligned_cols=125 Identities=13% Similarity=0.083 Sum_probs=102.8
Q ss_pred cCCCccchhhhhhhhhhhhhhHh-hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHH
Q 011353 359 GYKDDEGAATELSFQMWTGQMQE-TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEAL 437 (488)
Q Consensus 359 g~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~ 437 (488)
|......+....++..+.+.... +.-+.++|..++..|+|++|++.|++||+++|+ ++.+|+++|.+|.++|++++|+
T Consensus 12 g~~~~~~~d~~~Al~~~~~i~~~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~ 90 (192)
T d1hh8a_ 12 GVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAI 90 (192)
T ss_dssp HHHHHHTTCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHH
Confidence 43333344444455544443222 223559999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHhHhhCCCc----------------hHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 438 NDASQAQVISPVW----------------HMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 438 ~~~~~al~l~p~~----------------~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+|++|++..|.+ .++++++|.++..+|++++|++.|++|+++.|+.
T Consensus 91 ~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~ 153 (192)
T d1hh8a_ 91 KDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 153 (192)
T ss_dssp HHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred HHHHHHHHhCccCchHHHHHhhhhcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 9999999876543 4789999999999999999999999999998754
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.53 E-value=3.8e-15 Score=123.06 Aligned_cols=96 Identities=16% Similarity=0.049 Sum_probs=86.8
Q ss_pred hhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhc----------CChHHHHHHHHHhHhhCCCchHHHHHHH
Q 011353 389 GDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS----------DMPQEALNDASQAQVISPVWHMAAYLQA 458 (488)
Q Consensus 389 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (488)
+..+-+.+.|++|+..|++|++++|+ ++.+++++|.++..+ +.+++|+..|++|++++|+++.+|+++|
T Consensus 4 ~~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG 82 (145)
T d1zu2a1 4 ETEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIG 82 (145)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHH
Confidence 45566788899999999999999999 999999999999854 5568999999999999999999999999
Q ss_pred HHHHHCCC-----------HHHHHHHHHHHHccccccc
Q 011353 459 AALFALGK-----------ENEAQAALREASILENKKS 485 (488)
Q Consensus 459 ~~~~~~~~-----------~~~A~~~~~~al~ld~~~~ 485 (488)
.+|..+|+ |++|+++|++|++++|++.
T Consensus 83 ~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~ 120 (145)
T d1zu2a1 83 NAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 120 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHH
Confidence 99988764 7999999999999999753
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.52 E-value=1.3e-14 Score=121.54 Aligned_cols=105 Identities=15% Similarity=0.164 Sum_probs=91.7
Q ss_pred hhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC-----------HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCC
Q 011353 381 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS-----------PTAFARRSLSYLMSDMPQEALNDASQAQVISPV 449 (488)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~ 449 (488)
.+-....+|+.++..|+|++|++.|++||++.|+.. ..+|.++|.+|..+|++++|++++++++++.|.
T Consensus 8 ~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~ 87 (156)
T d2hr2a1 8 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 87 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcccc
Confidence 344455779999999999999999999999988721 468999999999999999999999999988653
Q ss_pred -----------chHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 450 -----------WHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 450 -----------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
...+++++|.+|..+|++++|+++|++|+++.|+..
T Consensus 88 ~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~ 134 (156)
T d2hr2a1 88 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 134 (156)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred cccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence 356899999999999999999999999999987554
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=5.7e-14 Score=132.02 Aligned_cols=118 Identities=8% Similarity=-0.003 Sum_probs=105.2
Q ss_pred hhhhhhhhhhhhhhHhhhhH----HHhhhHHHhhc-CHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHH
Q 011353 366 AATELSFQMWTGQMQETLNS----KKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDA 440 (488)
Q Consensus 366 ~~~~~a~~~~~~~~~~~~~~----~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 440 (488)
+..+.++..+..+++..++. ..+|..+...| ++++|+..|+++|+++|+ +..+|+++|.++..+|++++|++++
T Consensus 57 e~~~~Al~~~~~ai~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~ 135 (315)
T d2h6fa1 57 ERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFI 135 (315)
T ss_dssp CCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred CchHHHHHHHHHHHHHCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHH
Confidence 34566666666666665554 48899988865 699999999999999999 9999999999999999999999999
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 441 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
++|++++|++..+|+++|.++..+|++++|+++|++|++++|.+
T Consensus 136 ~kal~~dp~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n 179 (315)
T d2h6fa1 136 ADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 179 (315)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred hhhhhhhhcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCcc
Confidence 99999999999999999999999999999999999999999865
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1.8e-13 Score=128.74 Aligned_cols=100 Identities=16% Similarity=0.217 Sum_probs=95.8
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 464 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 464 (488)
+...|..+...|++++|+..|++++..+|+ +..+|.++|.+|..+|++++|++.|+++++++|+++.+|+++|.+|..+
T Consensus 175 ~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 253 (323)
T d1fcha_ 175 QCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINL 253 (323)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHHHHC
Confidence 447899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccccccc
Q 011353 465 GKENEAQAALREASILENKKS 485 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld~~~~ 485 (488)
|++++|++.|++|++++|+..
T Consensus 254 g~~~~A~~~~~~al~l~p~~~ 274 (323)
T d1fcha_ 254 GAHREAVEHFLEALNMQRKSR 274 (323)
T ss_dssp TCHHHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHhCCcCh
Confidence 999999999999999998754
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=2.9e-13 Score=127.14 Aligned_cols=98 Identities=10% Similarity=-0.036 Sum_probs=93.4
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcC-ChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-MPQEALNDASQAQVISPVWHMAAYLQAAALFALG 465 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 465 (488)
..|..+.+.+.+++|++.|++||+++|+ +..+|+++|.++..+| ++++|+.+++++++++|++..+|+++|.++..+|
T Consensus 48 ~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~~~~~~l~ 126 (315)
T d2h6fa1 48 YFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR 126 (315)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHhHHHHhhc
Confidence 5678888999999999999999999999 9999999999999987 5999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccccccc
Q 011353 466 KENEAQAALREASILENKKS 485 (488)
Q Consensus 466 ~~~~A~~~~~~al~ld~~~~ 485 (488)
++++|+++|++|+++||++.
T Consensus 127 ~~~eAl~~~~kal~~dp~n~ 146 (315)
T d2h6fa1 127 DPSQELEFIADILNQDAKNY 146 (315)
T ss_dssp CCTTHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHhhhhhhhhcch
Confidence 99999999999999999864
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=1.1e-12 Score=123.25 Aligned_cols=101 Identities=10% Similarity=0.033 Sum_probs=96.7
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
++..++|..+++.|+|++|+..|+++|+.+|+ +..+|.++|.+|..+|++++|+..|++|++++|+++.+|+++|.+|.
T Consensus 20 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 98 (323)
T d1fcha_ 20 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFT 98 (323)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccccc
Confidence 34458899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHcccccc
Q 011353 463 ALGKENEAQAALREASILENKK 484 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~ 484 (488)
.+|++++|++.|++++.++|+.
T Consensus 99 ~~~~~~~A~~~~~~~~~~~~~~ 120 (323)
T d1fcha_ 99 NESLQRQACEILRDWLRYTPAY 120 (323)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTT
T ss_pred ccccccccccchhhHHHhccch
Confidence 9999999999999999998864
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=7.9e-13 Score=126.39 Aligned_cols=118 Identities=14% Similarity=0.096 Sum_probs=104.6
Q ss_pred hhhhhhhhhhhhhHhhh----hHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHH
Q 011353 367 ATELSFQMWTGQMQETL----NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 442 (488)
Q Consensus 367 ~~~~a~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 442 (488)
..+.+...+.++++..+ .+...|..+...|++.+|++.|++++...|. ....+..++.++..+|++++|++.|++
T Consensus 252 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~ 330 (388)
T d1w3ba_ 252 LIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRK 330 (388)
T ss_dssp CHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHH
Confidence 34455555555554433 3448899999999999999999999999999 999999999999999999999999999
Q ss_pred hHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 443 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 443 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+++++|+++.+++++|.+|..+|++++|++.|++|++++|+..
T Consensus 331 al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~P~~~ 373 (388)
T d1w3ba_ 331 ALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFA 373 (388)
T ss_dssp HTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999753
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=1e-12 Score=99.62 Aligned_cols=83 Identities=13% Similarity=0.014 Sum_probs=74.7
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC------CHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHH
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV------SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 455 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (488)
+.+..+.|..+++.|+|++|+..|++|+++.|.. ...++.++|.++.++|++++|+..|++||+++|+++.+++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 4567799999999999999999999999886651 2678999999999999999999999999999999999999
Q ss_pred HHHHHHHHC
Q 011353 456 LQAAALFAL 464 (488)
Q Consensus 456 ~~g~~~~~~ 464 (488)
+++.+...+
T Consensus 85 Nl~~~~~~l 93 (95)
T d1tjca_ 85 NLKYFEYIM 93 (95)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 998876554
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.36 E-value=1.6e-12 Score=117.90 Aligned_cols=134 Identities=13% Similarity=0.091 Sum_probs=113.8
Q ss_pred HHHHHHHHhcCCCccchhhhhhhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHH
Q 011353 350 AIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSL 425 (488)
Q Consensus 350 ~~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~ 425 (488)
..++.+..+|......+..+.+...+.+++...++.. .+|..+.+.|++++|++.|+++++++|+ +..++.++|.
T Consensus 35 ~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~ 113 (259)
T d1xnfa_ 35 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGI 113 (259)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhh-hhhhHHHHHH
Confidence 3456677778777777778888888888887655544 8999999999999999999999999999 9999999999
Q ss_pred HHHhcCChHHHHHHHHHhHhhC----------------------------------------------------------
Q 011353 426 SYLMSDMPQEALNDASQAQVIS---------------------------------------------------------- 447 (488)
Q Consensus 426 ~~~~~~~~~~A~~~~~~al~l~---------------------------------------------------------- 447 (488)
+|..+|++++|+..++++++++
T Consensus 114 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (259)
T d1xnfa_ 114 ALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER 193 (259)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhhhHHHHHHHHHHhhccchhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999765
Q ss_pred ------------CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 448 ------------PVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 448 ------------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
|+...+|+++|.+|..+|++++|+..|++|+..+|.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 242 (259)
T d1xnfa_ 194 LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHN 242 (259)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHhhhcCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCC
Confidence 3345567778888888888888888888888888864
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=2.7e-12 Score=101.45 Aligned_cols=105 Identities=9% Similarity=0.013 Sum_probs=90.5
Q ss_pred HhcCCCccchhhhhhhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCC
Q 011353 357 KLGYKDDEGAATELSFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM 432 (488)
Q Consensus 357 ~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~ 432 (488)
..|......+.++.++..+..++...++.. .+|..+++.|+|++|+..|+++++++|+ +..+|+++|.++..+|+
T Consensus 8 ~~g~~~~~~g~~~eAi~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~ 86 (117)
T d1elwa_ 8 EKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNR 86 (117)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccC
Confidence 344444444566777777777777655544 8999999999999999999999999999 99999999999999999
Q ss_pred hHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 433 PQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 433 ~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
+++|+..|++|++++|+++.++..++.+..
T Consensus 87 ~~~A~~~~~~a~~~~p~~~~~~~~l~~l~~ 116 (117)
T d1elwa_ 87 FEEAKRTYEEGLKHEANNPQLKEGLQNMEA 116 (117)
T ss_dssp HHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHhC
Confidence 999999999999999999999999988753
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=3.2e-12 Score=122.04 Aligned_cols=97 Identities=14% Similarity=0.020 Sum_probs=93.6
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGK 466 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 466 (488)
+.|+.+++.|+|++|++.|+++++.+|+ +..++..+|.+|..+|++++|+..|++|++++|+++.+|+.+|.+|..+|+
T Consensus 4 ~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g~ 82 (388)
T d1w3ba_ 4 ELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQ 82 (388)
T ss_dssp THHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhcc
Confidence 5789999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcccccc
Q 011353 467 ENEAQAALREASILENKK 484 (488)
Q Consensus 467 ~~~A~~~~~~al~ld~~~ 484 (488)
+++|++.|.++++.++..
T Consensus 83 ~~~A~~~~~~~~~~~~~~ 100 (388)
T d1w3ba_ 83 LQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp HHHHHHHHHHHHHHCTTC
T ss_pred cccccccccccccccccc
Confidence 999999999999988753
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=6.2e-12 Score=105.24 Aligned_cols=126 Identities=13% Similarity=0.038 Sum_probs=105.0
Q ss_pred HHHHHHHhcCCCccchhhhhhhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHH
Q 011353 351 IHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS 426 (488)
Q Consensus 351 ~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~ 426 (488)
.++.+...|-.....+.+..+...+.++++..++.. .+|..++..|++++|+..|++||+++|+ +..+|.++|.+
T Consensus 9 ~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~ 87 (159)
T d1a17a_ 9 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAAS 87 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHhhhccccchhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 344455666555566777888888888887766555 9999999999999999999999999999 99999999999
Q ss_pred HHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH--HCCCHHHHHHHHHHH
Q 011353 427 YLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF--ALGKENEAQAALREA 477 (488)
Q Consensus 427 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~--~~~~~~~A~~~~~~a 477 (488)
+..+|++++|+.+++++++++|+++.++..++.+.. ..+.+++|+......
T Consensus 88 ~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~ 140 (159)
T d1a17a_ 88 NMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHK 140 (159)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 999999999999999999999999999998887754 445577777654433
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=1.2e-11 Score=104.58 Aligned_cols=85 Identities=14% Similarity=0.130 Sum_probs=80.3
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGK 466 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 466 (488)
++|..+++.|+|++|+..+++||+++|+ +..+|+++|.||..+|++++|+.+|++|++++|+++.+...++.++..+++
T Consensus 67 nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~ 145 (170)
T d1p5qa1 67 NLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRR 145 (170)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999 999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHH
Q 011353 467 ENEAQA 472 (488)
Q Consensus 467 ~~~A~~ 472 (488)
..+..+
T Consensus 146 ~~~~e~ 151 (170)
T d1p5qa1 146 QLAREK 151 (170)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776543
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.26 E-value=1.8e-11 Score=103.41 Aligned_cols=83 Identities=13% Similarity=0.185 Sum_probs=78.9
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGK 466 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 466 (488)
++|..+++.|+|.+|+..++++|.++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+...+++
T Consensus 69 Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~ 147 (168)
T d1kt1a1 69 NLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKE 147 (168)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 7899999999999999999999999999 999999999999999999999999999999999999999999999988877
Q ss_pred HHHH
Q 011353 467 ENEA 470 (488)
Q Consensus 467 ~~~A 470 (488)
+.+.
T Consensus 148 ~~e~ 151 (168)
T d1kt1a1 148 HNER 151 (168)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.25 E-value=1.9e-11 Score=103.35 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=80.0
Q ss_pred HHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCC
Q 011353 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG 465 (488)
Q Consensus 386 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 465 (488)
.++|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.++..+.
T Consensus 81 ~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~~~~~l~ 159 (169)
T d1ihga1 81 LNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIK 159 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999 99999999999999999999999999999999999999999999988877
Q ss_pred CHHHHH
Q 011353 466 KENEAQ 471 (488)
Q Consensus 466 ~~~~A~ 471 (488)
.+.++.
T Consensus 160 ~~~~~~ 165 (169)
T d1ihga1 160 AQKDKE 165 (169)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.19 E-value=1.1e-10 Score=99.15 Aligned_cols=99 Identities=10% Similarity=0.038 Sum_probs=89.9
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC---------------------CHHHHhhHHHHHHhcCChHHHHH
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV---------------------SPTAFARRSLSYLMSDMPQEALN 438 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---------------------~~~~~~~~~~~~~~~~~~~~A~~ 438 (488)
........+|..+...|++++|++.|++|+++.+.. ...++.+++.++..+|++++|+.
T Consensus 9 ~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al~ 88 (179)
T d2ff4a2 9 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIA 88 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHH
Confidence 345566789999999999999999999999998752 11578899999999999999999
Q ss_pred HHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 011353 439 DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREAS 478 (488)
Q Consensus 439 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 478 (488)
+++++++++|.+..+|..++.+|..+|++.+|++.|+++.
T Consensus 89 ~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~ 128 (179)
T d2ff4a2 89 ELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVK 128 (179)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999983
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.16 E-value=4.7e-11 Score=99.01 Aligned_cols=80 Identities=11% Similarity=0.111 Sum_probs=75.5
Q ss_pred HHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCC
Q 011353 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG 465 (488)
Q Consensus 386 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 465 (488)
.++|..+++.|+|++|++.|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|+++.+...++.+...++
T Consensus 71 ~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~kl~ 149 (153)
T d2fbna1 71 LNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLK 149 (153)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 37999999999999999999999999999 99999999999999999999999999999999999999999998877654
Q ss_pred C
Q 011353 466 K 466 (488)
Q Consensus 466 ~ 466 (488)
+
T Consensus 150 ~ 150 (153)
T d2fbna1 150 E 150 (153)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.13 E-value=1.2e-11 Score=107.55 Aligned_cols=111 Identities=8% Similarity=0.003 Sum_probs=90.9
Q ss_pred HHHHhcCCCccchhhhhhhhhhhhhhHhhhhHH----HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh
Q 011353 354 ILEKLGYKDDEGAATELSFQMWTGQMQETLNSK----KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM 429 (488)
Q Consensus 354 ~l~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~ 429 (488)
.|...|......+.+..++..+.+++...+... .+|..+++.|+|++|+..|++||+++|+ +..+|+++|.+|..
T Consensus 6 ~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~-~~~a~~~lg~~~~~ 84 (201)
T d2c2la1 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLE 84 (201)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCC-cHHHHHHHHHHHHH
Confidence 355556555566778888888888887655444 8899999999999999999999999999 99999999999999
Q ss_pred cCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCC
Q 011353 430 SDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG 465 (488)
Q Consensus 430 ~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 465 (488)
+|++++|+..|++|++++|++...+...+..+...+
T Consensus 85 l~~~~~A~~~~~~al~l~p~~~~~~~~~~~~~l~~~ 120 (201)
T d2c2la1 85 MESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIA 120 (201)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Confidence 999999999999999999977655544444444333
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=2.3e-10 Score=91.56 Aligned_cols=69 Identities=16% Similarity=0.061 Sum_probs=65.0
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 417 PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+..+-++|.+++..|+|++|+..|++||+++|+++.+++++|.+|..+|+|++|+++|++|++++|+..
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~ 72 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR 72 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccH
Confidence 456778999999999999999999999999999999999999999999999999999999999998654
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=2.6e-10 Score=85.97 Aligned_cols=69 Identities=9% Similarity=-0.151 Sum_probs=62.8
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc-------hHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 417 PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW-------HMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~-------~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
+.-.+.+|.++.++|+|++|+..|++|+++.|.+ ++++.++|.+++.+|++++|++.|++||+++|+..
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~ 80 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCH
Confidence 4556789999999999999999999999997654 68899999999999999999999999999999754
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.03 E-value=3.4e-10 Score=88.21 Aligned_cols=68 Identities=21% Similarity=0.012 Sum_probs=64.3
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 418 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
..+++.|.++.+.|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|+..
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 84 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI 84 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccc
Confidence 34678999999999999999999999999999999999999999999999999999999999999764
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.99 E-value=4e-10 Score=92.19 Aligned_cols=102 Identities=14% Similarity=-0.064 Sum_probs=82.1
Q ss_pred hhhhhhhhhhhhHhhhhHH----HhhhHHHh----------hcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCC-
Q 011353 368 TELSFQMWTGQMQETLNSK----KKGDVAFR----------HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM- 432 (488)
Q Consensus 368 ~~~a~~~~~~~~~~~~~~~----~~g~~~~~----------~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~- 432 (488)
.+.+...+..+++..|+.. ..|..++. .+.+++|+..|++||+++|+ +..+|+++|.+|..+|+
T Consensus 13 fe~A~~~~e~al~~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~ 91 (145)
T d1zu2a1 13 FEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFL 91 (145)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccc
Confidence 4555556666665554443 78888764 46678999999999999999 99999999999988764
Q ss_pred ----------hHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHH
Q 011353 433 ----------PQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEA 470 (488)
Q Consensus 433 ----------~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 470 (488)
|++|++.|++|++++|++..++..++.+....+.+.++
T Consensus 92 ~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 92 TPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhHHHHHHhHHHhhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999887665555554
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=5.4e-10 Score=88.24 Aligned_cols=96 Identities=11% Similarity=-0.014 Sum_probs=76.2
Q ss_pred hhhhhhhhhhhHhhh----hHHHhhhHHHh---hcCHHHHHHHHHHHHhcCCCCC-HHHHhhHHHHHHhcCChHHHHHHH
Q 011353 369 ELSFQMWTGQMQETL----NSKKKGDVAFR---HKDFRASIECYTQFIDVGTMVS-PTAFARRSLSYLMSDMPQEALNDA 440 (488)
Q Consensus 369 ~~a~~~~~~~~~~~~----~~~~~g~~~~~---~~~~~~A~~~~~~ai~~~p~~~-~~~~~~~~~~~~~~~~~~~A~~~~ 440 (488)
..+-..+.+++...+ ...+.|..+++ .+++++|+..|++++..+|.+. ..+++++|.+|.++|++++|++.|
T Consensus 16 ~~Ae~~Y~~aL~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~ 95 (122)
T d1nzna_ 16 LKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYV 95 (122)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 333344455554433 33488888876 4567789999999999998722 458999999999999999999999
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHC
Q 011353 441 SQAQVISPVWHMAAYLQAAALFAL 464 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~ 464 (488)
+++|+++|++..|...++.+...+
T Consensus 96 ~~aL~~~P~~~~A~~l~~~I~~~~ 119 (122)
T d1nzna_ 96 RGLLQTEPQNNQAKELERLIDKAM 119 (122)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCcCCHHHHHHHHHHHHHH
Confidence 999999999999999998876554
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=2.1e-09 Score=106.83 Aligned_cols=99 Identities=8% Similarity=-0.081 Sum_probs=71.2
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
......|..+.+.+++++|+..|.+++.++|. .++.++|.++..+|++++|+.+|++|++++|+++.+|+++|.++.
T Consensus 121 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg~~~~ 197 (497)
T d1ya0a1 121 VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILAS 197 (497)
T ss_dssp ----------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHH
T ss_pred HHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 34458899999999999999999999988764 578889999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHHcccccc
Q 011353 463 ALGKENEAQAALREASILENKK 484 (488)
Q Consensus 463 ~~~~~~~A~~~~~~al~ld~~~ 484 (488)
..|++.+|+.+|.+|+.++|..
T Consensus 198 ~~~~~~~A~~~y~ral~~~~~~ 219 (497)
T d1ya0a1 198 SKGDHLTTIFYYCRSIAVKFPF 219 (497)
T ss_dssp HTTCHHHHHHHHHHHHSSSBCC
T ss_pred HcCCHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999998743
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.77 E-value=9.6e-09 Score=94.37 Aligned_cols=136 Identities=7% Similarity=-0.182 Sum_probs=103.2
Q ss_pred hHHHHHHHHhcCCCccchhhhhhhhhhhhhhHh----------hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCC---
Q 011353 349 TAIHEILEKLGYKDDEGAATELSFQMWTGQMQE----------TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--- 415 (488)
Q Consensus 349 ~~~~~~l~~~g~~~~~~~~~~~a~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--- 415 (488)
....+.+.+.|......+.++.+...+.++.+. +..+.+.|..+.+.|++++|++.|++++++.+..
T Consensus 34 ~~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~ 113 (290)
T d1qqea_ 34 EEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF 113 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccc
Confidence 344555666554333444455555555555442 3345588999999999999999999999887651
Q ss_pred --CHHHHhhHHHHHHh-cCChHHHHHHHHHhHhhCCC------chHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 416 --SPTAFARRSLSYLM-SDMPQEALNDASQAQVISPV------WHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 416 --~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~l~p~------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
...++.++|.+|.. +|++++|++.|++|+++.+. ...++.++|.++..+|+|++|+..|++++++.+..
T Consensus 114 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~ 191 (290)
T d1qqea_ 114 RRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred hhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccc
Confidence 15678888888754 79999999999999988543 36678999999999999999999999999987654
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.76 E-value=4.7e-10 Score=105.58 Aligned_cols=111 Identities=11% Similarity=-0.056 Sum_probs=97.3
Q ss_pred hhhhhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHH
Q 011353 374 MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA 453 (488)
Q Consensus 374 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a 453 (488)
.+.......+........+...+.+.+|+..|.+++..+|. ....+.+++.++...+++.+|+..+.++++.+|++..+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~l~~~~~-~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~p~~~~~ 278 (334)
T d1dcea1 200 QGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAE-PLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLT 278 (334)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCC-CSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHhHHhHHHHHHHHHHHHHhcchhHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHhhHHHHHHHHHHHHhhCchHHHH
Confidence 33344444444455566677788889999999999999999 88889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 454 AYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 454 ~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
++.+|.+|..+|++++|+++|++|+++||.+.
T Consensus 279 ~~~l~~~~~~~~~~~eA~~~~~~ai~ldP~~~ 310 (334)
T d1dcea1 279 IILLMRALDPLLYEKETLQYFSTLKAVDPMRA 310 (334)
T ss_dssp HHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCcccH
Confidence 99999999999999999999999999999653
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.76 E-value=1.7e-08 Score=90.82 Aligned_cols=95 Identities=8% Similarity=-0.018 Sum_probs=77.8
Q ss_pred hhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHH---------
Q 011353 388 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA--------- 458 (488)
Q Consensus 388 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g--------- 458 (488)
++..+++.|++++|+..|+++|+.+|+ +..++.+++.+|...|++++|++.++++++++|++..++..++
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 456778899999999999999999999 9999999999999999999999999999999877766555544
Q ss_pred --------------------------HHHHHCCCHHHHHHHHHHHHccccc
Q 011353 459 --------------------------AALFALGKENEAQAALREASILENK 483 (488)
Q Consensus 459 --------------------------~~~~~~~~~~~A~~~~~~al~ld~~ 483 (488)
.++...|++++|++.++++.++.|.
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~ 131 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQE 131 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC
Confidence 4444457777777777777777654
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.75 E-value=6e-09 Score=95.79 Aligned_cols=100 Identities=9% Similarity=-0.028 Sum_probs=86.5
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCC-----CCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc------h
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGT-----MVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------H 451 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~ 451 (488)
..+.+.|+.+...|+|++|++.|.+|+++.. ......|.+.|.||.++|++++|++.|++|+++.+.. .
T Consensus 38 ~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 117 (290)
T d1qqea_ 38 DLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGA 117 (290)
T ss_dssp HHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHH
Confidence 3455778999999999999999999998732 1145789999999999999999999999999987766 7
Q ss_pred HHHHHHHHHHHH-CCCHHHHHHHHHHHHcccc
Q 011353 452 MAAYLQAAALFA-LGKENEAQAALREASILEN 482 (488)
Q Consensus 452 ~a~~~~g~~~~~-~~~~~~A~~~~~~al~ld~ 482 (488)
.++.++|.+|.. +|++++|++.|++|+++.+
T Consensus 118 ~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~ 149 (290)
T d1qqea_ 118 NFKFELGEILENDLHDYAKAIDCYELAGEWYA 149 (290)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHH
Confidence 788899998865 6999999999999998864
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.72 E-value=2.5e-08 Score=93.36 Aligned_cols=116 Identities=11% Similarity=0.028 Sum_probs=86.7
Q ss_pred hhhhhhhhhhhhHhhhhH----HHhhhHHHhh--cCHHHHHHHHHHHHhcCCCCCHHH-HhhHHHHHHhcCChHHHHHHH
Q 011353 368 TELSFQMWTGQMQETLNS----KKKGDVAFRH--KDFRASIECYTQFIDVGTMVSPTA-FARRSLSYLMSDMPQEALNDA 440 (488)
Q Consensus 368 ~~~a~~~~~~~~~~~~~~----~~~g~~~~~~--~~~~~A~~~~~~ai~~~p~~~~~~-~~~~~~~~~~~~~~~~A~~~~ 440 (488)
...++..+...+...+.. ..+|..+... +++++|+..++++++++|+ +..+ +..++.++...+++++|+..+
T Consensus 89 ~~~al~~~~~~l~~~pk~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~Al~~~ 167 (334)
T d1dcea1 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFT 167 (334)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCch-hhhhhhhHHHHHHHhccccHHHHHHH
Confidence 444555555555443332 3566666554 4588888888888888888 5555 456778888888888888888
Q ss_pred HHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHcccccc
Q 011353 441 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 484 (488)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~ 484 (488)
+++++++|++..+|+++|.++..+|++++|+..+++++++.|+.
T Consensus 168 ~~~i~~~p~~~~a~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 211 (334)
T d1dcea1 168 DSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKE 211 (334)
T ss_dssp HTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHhHHhHHHH
Confidence 88888888888888888888888888888888888888777654
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.64 E-value=3.8e-08 Score=88.80 Aligned_cols=138 Identities=14% Similarity=-0.001 Sum_probs=92.2
Q ss_pred ccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEEecCCC
Q 011353 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPN 137 (488)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~ 137 (488)
+++++..+-++.+.||+....+ ..+.||+...........+.+|...+..+. +--+++++.++.+++..++||++++|
T Consensus 16 ~~~~~~~~G~s~~~v~rv~~~~-~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G 94 (263)
T d1j7la_ 16 YRCVKDTEGMSPAKVYKLVGEN-ENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECSCCCSSSEEEEEECSS-CEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred eEEEEcCCCCCCCcEEEEEeCC-CeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccc
Confidence 3455444445557899987644 467788876544334445778888888874 44478889998889999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc--------------------------------------------
Q 011353 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-------------------------------------------- 173 (488)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-------------------------------------------- 173 (488)
.++.+..... .. ...++.+++..|..||+
T Consensus 95 ~~~~~~~~~~----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T d1j7la_ 95 VLCSEEYEDE----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp EEHHHHTTTC----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSH
T ss_pred cccccccccc----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHH
Confidence 8876654210 11 11223333333333332
Q ss_pred ---------C-----CCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 174 ---------K-----ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 174 ---------~-----~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
. ..++|+|+.|.|||+++++.+-|+||+.+.
T Consensus 168 ~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 0 137899999999999977667799999764
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.59 E-value=5.9e-08 Score=96.14 Aligned_cols=107 Identities=9% Similarity=-0.019 Sum_probs=79.6
Q ss_pred hcCCCccchhhhhhhhhhhhhhHhh--hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHH
Q 011353 358 LGYKDDEGAATELSFQMWTGQMQET--LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQE 435 (488)
Q Consensus 358 ~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~ 435 (488)
+|......+....+...+..++... ..+...|..+...++|++|+..|++|++++|+ +...|+++|.++...|++.+
T Consensus 126 lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~ 204 (497)
T d1ya0a1 126 LGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLT 204 (497)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHH
T ss_pred hHHHHHhCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHH
Confidence 3333333333344444444433322 33558899999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHhHhhCCCchHHHHHHHHHHHHCC
Q 011353 436 ALNDASQAQVISPVWHMAAYLQAAALFALG 465 (488)
Q Consensus 436 A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 465 (488)
|+.+|.+||.++|.++.|+.+++.++....
T Consensus 205 A~~~y~ral~~~~~~~~a~~nL~~~~~~~~ 234 (497)
T d1ya0a1 205 TIFYYCRSIAVKFPFPAASTNLQKALSKAL 234 (497)
T ss_dssp HHHHHHHHHSSSBCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999887654
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.58 E-value=1e-07 Score=88.72 Aligned_cols=101 Identities=14% Similarity=-0.044 Sum_probs=88.5
Q ss_pred hhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC----HHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCc------h
Q 011353 382 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS----PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------H 451 (488)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~ 451 (488)
++-...+|..++..|++++|++.|++|++..|..+ ..++..+|.+|..+|++++|+..|++++++.+.. .
T Consensus 12 ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 91 (366)
T d1hz4a_ 12 AEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL 91 (366)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchHHHH
Confidence 33444689999999999999999999999999833 3578899999999999999999999999986543 5
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 452 MAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
.+++++|.++...|++..|+..+.+++++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~ 122 (366)
T d1hz4a_ 92 WSLIQQSEILFAQGFLQTAWETQEKAFQLIN 122 (366)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 6788999999999999999999999998754
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.40 E-value=2.4e-07 Score=76.20 Aligned_cols=68 Identities=22% Similarity=0.107 Sum_probs=58.8
Q ss_pred HHHHhhH--HHHHHhcCChHHHHHHHHHhHhhCCCc------------hHHHHHHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 417 PTAFARR--SLSYLMSDMPQEALNDASQAQVISPVW------------HMAAYLQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 417 ~~~~~~~--~~~~~~~~~~~~A~~~~~~al~l~p~~------------~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
+.+|.++ |..++..|+|++|++.|++||+++|+. +.+|.++|.+|..+|++++|++++++++++.|
T Consensus 7 a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 3455554 778888999999999999999999875 36899999999999999999999999999876
Q ss_pred cc
Q 011353 483 KK 484 (488)
Q Consensus 483 ~~ 484 (488)
+.
T Consensus 87 ~~ 88 (156)
T d2hr2a1 87 RR 88 (156)
T ss_dssp HH
T ss_pred cc
Confidence 43
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.33 E-value=5.9e-07 Score=83.36 Aligned_cols=98 Identities=12% Similarity=0.002 Sum_probs=86.7
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCC---HHHHhhHHHHHHhcCChHHHHHHHHHhHh------hCCCchHHHH
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQV------ISPVWHMAAY 455 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~------l~p~~~~a~~ 455 (488)
....|..+...|++++|...+.+++...|..+ ...+.++|.++..+|++++|+..+++++. ..|....++.
T Consensus 216 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 295 (366)
T d1hz4a_ 216 NKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLL 295 (366)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHHHHH
Confidence 34778888999999999999999999987632 45678899999999999999999999984 4577789999
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHcccc
Q 011353 456 LQAAALFALGKENEAQAALREASILEN 482 (488)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~ld~ 482 (488)
.+|.+|..+|++++|++.|++|+++.+
T Consensus 296 ~la~~~~~~g~~~~A~~~l~~Al~l~~ 322 (366)
T d1hz4a_ 296 LLNQLYWQAGRKSDAQRVLLDALKLAN 322 (366)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999864
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.20 E-value=1.1e-06 Score=67.36 Aligned_cols=67 Identities=7% Similarity=-0.108 Sum_probs=56.9
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH
Q 011353 396 KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 462 (488)
Q Consensus 396 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (488)
.+.++|+..++++++.+|.....+++++|.+|.++|+|++|...++++|+++|++..|...+-.+..
T Consensus 52 ~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~Ie~ 118 (124)
T d2pqrb1 52 NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVED 118 (124)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Confidence 5678899999999999987335899999999999999999999999999999999888876665543
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.20 E-value=3.4e-06 Score=64.61 Aligned_cols=73 Identities=8% Similarity=0.008 Sum_probs=63.6
Q ss_pred CCCCHHHHhhHHHHHHhc---CChHHHHHHHHHhHhhCCCc-hHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 413 TMVSPTAFARRSLSYLMS---DMPQEALNDASQAQVISPVW-HMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 413 p~~~~~~~~~~~~~~~~~---~~~~~A~~~~~~al~l~p~~-~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
|.......++.|.++.+. .+.++||..++.+++.+|.+ .+.+|++|.+|+++|+|++|+++++++|+++|++.
T Consensus 31 ~~~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~ 107 (124)
T d2pqrb1 31 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 107 (124)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcH
Confidence 443577888888888865 45678999999999999976 58999999999999999999999999999999765
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.13 E-value=8.3e-06 Score=74.79 Aligned_cols=96 Identities=8% Similarity=-0.045 Sum_probs=75.6
Q ss_pred HHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHH-HhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHC
Q 011353 386 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSY-LMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 464 (488)
Q Consensus 386 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 464 (488)
...+....+.++++.|.+.|.+|++..|. ....|...|... ...|+.+.|...|+++++.+|+++..|...+..+...
T Consensus 138 ~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~~~ 216 (308)
T d2onda1 138 IQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHL 216 (308)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHc
Confidence 35566666778888888888888888888 777777776654 3457888888888888888888888888888888888
Q ss_pred CCHHHHHHHHHHHHcccc
Q 011353 465 GKENEAQAALREASILEN 482 (488)
Q Consensus 465 ~~~~~A~~~~~~al~ld~ 482 (488)
|++++|...|++|++..|
T Consensus 217 g~~~~aR~~fe~ai~~~~ 234 (308)
T d2onda1 217 NEDNNTRVLFERVLTSGS 234 (308)
T ss_dssp CCHHHHHHHHHHHHHSSS
T ss_pred CChHHHHHHHHHHHHhCC
Confidence 888888888888888654
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.09 E-value=1.3e-05 Score=71.13 Aligned_cols=70 Identities=19% Similarity=0.184 Sum_probs=52.8
Q ss_pred CCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccC--CCCcccEEEEEeeCCeeEEEEecCCCCCHHh
Q 011353 70 PNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (488)
Q Consensus 70 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~ 142 (488)
.+.||+....++..+.+|....... ..+..|...++.+. .-.+++++.+..+++..++||++++|.++.+
T Consensus 24 ~~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 24 DAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp SCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred CCeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccc
Confidence 3679999987888899998765432 23667888887773 3346788888888888999999999866543
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=98.09 E-value=2.8e-05 Score=61.38 Aligned_cols=85 Identities=12% Similarity=0.031 Sum_probs=74.3
Q ss_pred hhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh----cCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH----CC
Q 011353 394 RHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQAAALFA----LG 465 (488)
Q Consensus 394 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~ 465 (488)
...++++|+..|+++.+.+ +..+.+++|.+|.. ..++++|++.|++|.+. .++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~g---~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhccc---chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 4578999999999998863 78888999999986 56899999999999886 578999999999987 57
Q ss_pred CHHHHHHHHHHHHccccc
Q 011353 466 KENEAQAALREASILENK 483 (488)
Q Consensus 466 ~~~~A~~~~~~al~ld~~ 483 (488)
++++|+++|++|.++...
T Consensus 110 d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp CHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHCCCH
Confidence 999999999999988643
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.06 E-value=2.9e-06 Score=75.79 Aligned_cols=61 Identities=20% Similarity=-0.028 Sum_probs=56.9
Q ss_pred HHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHccccccc
Q 011353 425 LSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 485 (488)
Q Consensus 425 ~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ld~~~~ 485 (488)
.-.+..|++++|++.++++++.+|+++.++..+|.+|...|++++|++.|+++++++|+..
T Consensus 4 ~~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~ 64 (264)
T d1zbpa1 4 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 64 (264)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcH
Confidence 3456789999999999999999999999999999999999999999999999999999753
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.91 E-value=3.3e-05 Score=70.59 Aligned_cols=98 Identities=6% Similarity=-0.057 Sum_probs=87.5
Q ss_pred HhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHH-HCC
Q 011353 387 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF-ALG 465 (488)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~-~~~ 465 (488)
..+....+.|++++|...|+++|+..|.+...+|...+....+.|++++|.+.|++|++..|.....|...|.... ..|
T Consensus 104 ~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~~~~~ 183 (308)
T d2onda1 104 AYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK 183 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSC
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcc
Confidence 5677778899999999999999999998445678899999999999999999999999999999999999998654 568
Q ss_pred CHHHHHHHHHHHHcccccc
Q 011353 466 KENEAQAALREASILENKK 484 (488)
Q Consensus 466 ~~~~A~~~~~~al~ld~~~ 484 (488)
+.+.|...|+++++..|+.
T Consensus 184 ~~~~a~~i~e~~l~~~p~~ 202 (308)
T d2onda1 184 DKSVAFKIFELGLKKYGDI 202 (308)
T ss_dssp CHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhhhhh
Confidence 9999999999999987764
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.84 E-value=5.9e-05 Score=71.40 Aligned_cols=76 Identities=13% Similarity=0.142 Sum_probs=49.8
Q ss_pred cccCCCCCCCeEEEEEeC-CCCEEEEEEcCC------CCC-ccHHHHHHHHHHHhcc-CC--CCcccEEEEEeeCCeeEE
Q 011353 62 VSEHGEKAPNVVYKGKLE-NQFRIAVKRFNR------SAW-PDARQFLEEARAVGQL-RN--RRLANLLGCCCEGDERLL 130 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~------~~~-~~~~~~~~e~~~l~~l-~h--~niv~l~~~~~~~~~~~l 130 (488)
++++|.|....||++... +++.|+||.-.. ... -...+...|...|+.+ .+ ..+++++.+ +....++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 457899999999999854 467899996432 111 1233456788888777 33 456777765 4455689
Q ss_pred EEecCCCCC
Q 011353 131 VAEYMPNDT 139 (488)
Q Consensus 131 v~E~~~~gs 139 (488)
|||++++..
T Consensus 109 vmE~L~~~~ 117 (392)
T d2pula1 109 VMEDLSHLK 117 (392)
T ss_dssp EECCCTTSE
T ss_pred EEeccCCcc
Confidence 999997754
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.81 E-value=2.8e-05 Score=64.91 Aligned_cols=65 Identities=15% Similarity=0.103 Sum_probs=59.8
Q ss_pred HHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHh-------HhhCCCc
Q 011353 385 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQA-------QVISPVW 450 (488)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-------l~l~p~~ 450 (488)
+..+|..+...|+|++|+..++++++++|. +..+|.+++.+|..+|++.+|++.|+++ +.++|..
T Consensus 70 ~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 70 HTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 347899999999999999999999999999 9999999999999999999999999998 5577753
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.80 E-value=0.00011 Score=65.07 Aligned_cols=95 Identities=14% Similarity=0.148 Sum_probs=82.8
Q ss_pred hhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh----cCChHHHHHHHHHhHhhCCCchHHHHHHH
Q 011353 383 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQA 458 (488)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (488)
..+...|..++..+||++|++.|++|.+. . +..+++++|.+|.. ..++..|+..++++.+.. ++.+.+.+|
T Consensus 3 ~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g-~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~--~~~a~~~l~ 77 (265)
T d1ouva_ 3 KELVGLGAKSYKEKDFTQAKKYFEKACDL--K-ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLG 77 (265)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc--ccchhhccc
Confidence 35568899999999999999999999876 4 78889999999997 779999999999988764 789999999
Q ss_pred HHHHH----CCCHHHHHHHHHHHHcccc
Q 011353 459 AALFA----LGKENEAQAALREASILEN 482 (488)
Q Consensus 459 ~~~~~----~~~~~~A~~~~~~al~ld~ 482 (488)
.++.. ..+.+.|+..|+++.+.++
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~a~~~g~ 105 (265)
T d1ouva_ 78 NLYYSGQGVSQNTNKALQYYSKACDLKY 105 (265)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred cccccccccchhhHHHHHHHhhhhhhhh
Confidence 98876 4789999999999998764
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.49 E-value=0.00031 Score=62.08 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=79.1
Q ss_pred HHhhhHHHh----hcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHh----cCChHHHHHHHHHhHhhCCCchHHHHHH
Q 011353 386 KKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQ 457 (488)
Q Consensus 386 ~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (488)
...|..+.. ..+...+...++++.+. . +..+.+++|.+|.. .+++++|+..|++|.+. +++.+++++
T Consensus 146 ~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~--g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~L 220 (265)
T d1ouva_ 146 TILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGGGCFNL 220 (265)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred hhhhhhhccCCCcccccccchhhhhccccc--c-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHHHHHHH
Confidence 355666654 57788999999998864 4 78899999999997 67999999999999998 578999999
Q ss_pred HHHHHH----CCCHHHHHHHHHHHHcccccc
Q 011353 458 AAALFA----LGKENEAQAALREASILENKK 484 (488)
Q Consensus 458 g~~~~~----~~~~~~A~~~~~~al~ld~~~ 484 (488)
|.+|.. .+++++|+++|++|.++++..
T Consensus 221 G~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~ 251 (265)
T d1ouva_ 221 GAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 251 (265)
T ss_dssp HHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHHCcCHH
Confidence 999986 458999999999999987643
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=0.00075 Score=61.77 Aligned_cols=96 Identities=20% Similarity=0.117 Sum_probs=59.1
Q ss_pred ccccCHHHHHHHhcCCC--cccccccCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCCcc--
Q 011353 41 FCEYSIETLRTATSGFA--MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA-- 116 (488)
Q Consensus 41 ~~~~~~~~~~~~~~~~~--~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-- 116 (488)
|..++.+.+..+..++. ...-+..|+ +.-..||++...+|..+++|+.+... ....++..|...+..|....+.
T Consensus 5 f~~L~pd~i~~al~~~g~~~~~~~~~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~ 82 (325)
T d1zyla1 5 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA 82 (325)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred ccccCHHHHHHHHHHcCCCCCcCccccc-cccceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCC
Confidence 45566666655554432 211122233 33478999999899999999987543 2456788898888887432221
Q ss_pred cEE-----EEEeeCCeeEEEEecCCCC
Q 011353 117 NLL-----GCCCEGDERLLVAEYMPND 138 (488)
Q Consensus 117 ~l~-----~~~~~~~~~~lv~E~~~~g 138 (488)
..+ ..+...+..+.++++++|.
T Consensus 83 ~p~~~~g~~~~~~~~~~~~l~~~~~G~ 109 (325)
T d1zyla1 83 APVAFNGQTLLNHQGFYFAVFPSVGGR 109 (325)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred CceecCCCeeeeeeeEEEEEEeecCCc
Confidence 111 1223456778999999774
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.29 E-value=0.00056 Score=53.53 Aligned_cols=81 Identities=14% Similarity=0.029 Sum_probs=66.2
Q ss_pred hcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHHhcCChHHHHHHHHHhHhhCCCchHHHHHHHHHHHH----CCCHHHH
Q 011353 395 HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA----LGKENEA 470 (488)
Q Consensus 395 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A 470 (488)
.+|+++|++.|++|.+.... .+.++++ .....++++|+..+++|.+. +++.+.+.+|..|.. ..++++|
T Consensus 6 ~kd~~~A~~~~~kaa~~g~~---~a~~~l~--~~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A 78 (133)
T d1klxa_ 6 KKDLKKAIQYYVKACELNEM---FGCLSLV--SNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 78 (133)
T ss_dssp HHHHHHHHHHHHHHHHTTCT---THHHHHH--TCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCh---hhhhhhc--cccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHH
Confidence 46899999999999988633 3344444 34567899999999999876 689999999999987 5689999
Q ss_pred HHHHHHHHcccc
Q 011353 471 QAALREASILEN 482 (488)
Q Consensus 471 ~~~~~~al~ld~ 482 (488)
+++|++|.+...
T Consensus 79 ~~~~~~aa~~g~ 90 (133)
T d1klxa_ 79 AQYYSKACGLND 90 (133)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHhhhhccCc
Confidence 999999998763
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.96 E-value=0.0015 Score=61.41 Aligned_cols=73 Identities=15% Similarity=0.252 Sum_probs=51.8
Q ss_pred cccCCCCCCCeEEEEEeCC--------CCEEEEEEcCCCCCccHHHHHHHHHHHhccC-CCCcccEEEEEeeCCeeEEEE
Q 011353 62 VSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 132 (488)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 132 (488)
++.|+-|-...+|++...+ ...|.+++.... .......+|..+++.+. +.-.+++++++.+ .+|+
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~--~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc--chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 4677889999999998643 345777776532 23445668999999884 5555688888753 7899
Q ss_pred ecCCCCCH
Q 011353 133 EYMPNDTL 140 (488)
Q Consensus 133 E~~~~gsL 140 (488)
||++|.+|
T Consensus 121 efi~g~~l 128 (395)
T d1nw1a_ 121 EYIPSRPL 128 (395)
T ss_dssp CCCCEEEC
T ss_pred EEeccccC
Confidence 99987544
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.95 E-value=0.00049 Score=62.71 Aligned_cols=158 Identities=12% Similarity=0.046 Sum_probs=85.0
Q ss_pred cCHHHHHHHhcCCCcccccc--cCCCCCCCeEEEEEeCCCCEEEEEEcCCCCCccHHHHHHHHHHHhccCCCC--cccEE
Q 011353 44 YSIETLRTATSGFAMENIVS--EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLL 119 (488)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~i~--~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~ 119 (488)
.+.+++......|+-.++.+ .+..|.-.+.|+.+..+| .+++|+..... ....+..|+.++..|.+.+ ++..+
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi 79 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 79 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccc
Confidence 56788888888776544443 355777788999998776 48899986432 2234455666777664222 11111
Q ss_pred E------EEeeCCeeEEEEecCCCCCHHhh-----------h---c----cCC---CCCCCH------------------
Q 011353 120 G------CCCEGDERLLVAEYMPNDTLAKH-----------L---F----HWE---TQPMKW------------------ 154 (488)
Q Consensus 120 ~------~~~~~~~~~lv~E~~~~gsL~~~-----------l---~----~~~---~~~l~~------------------ 154 (488)
. +.........++.++.+...... + + ... ......
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
T d2ppqa1 80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 159 (316)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence 1 11224556677777766422110 0 0 000 000000
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCcccccccCcceeeCCCCCeeeecCCCcc
Q 011353 155 AMRLRVALHIAEALEYCTSK---ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (488)
Q Consensus 155 ~~~~~i~~qi~~~L~~LH~~---~~iiH~Dlkp~Nill~~~~~~kl~DfGla~ 204 (488)
......+..+...+.-.+.. .|+||+|+.+.||+++.+...-|.||+.+.
T Consensus 160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence 01112222222223332221 379999999999999988777899999864
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.22 E-value=0.77 Score=30.75 Aligned_cols=25 Identities=36% Similarity=0.363 Sum_probs=16.3
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHc
Q 011353 455 YLQAAALFALGKENEAQAALREASI 479 (488)
Q Consensus 455 ~~~g~~~~~~~~~~~A~~~~~~al~ 479 (488)
-++|..+...|+|++||+++++|..
T Consensus 12 ~RrAer~l~~~rydeAIech~kA~~ 36 (83)
T d2crba1 12 SRRADRLLAAGKYEEAISCHRKATT 36 (83)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3566666677777777776666654
|
| >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: Alkylsulfatase-like domain: Alkylsulfatase SdsA1 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.12 E-value=3.2 Score=39.03 Aligned_cols=78 Identities=14% Similarity=0.123 Sum_probs=60.8
Q ss_pred HHHHhcCCCccchh-----hhhhhhhhhhhhHhhhhHHHhhhHHHhhcCHHHHHHHHHHHHhcCCCCCHHHHhhHHHHHH
Q 011353 354 ILEKLGYKDDEGAA-----TELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYL 428 (488)
Q Consensus 354 ~l~~~g~~~~~~~~-----~~~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~ 428 (488)
+-.-+||-+..... ....-+.+.+.+.-...+.+++..++..|+|+-|.+..+.++..+|+ +..+...+|.+|.
T Consensus 397 y~~y~GW~dgnp~~L~p~~~~~~a~~~v~~~GG~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~-~~~ar~l~a~~~~ 475 (505)
T d2cfua2 397 LNRYLGYYDGNPATLDPLSPEDSAGRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPD-NRAARELQADALE 475 (505)
T ss_dssp HHHHHCSCCSCGGGTSCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHH
T ss_pred HHHhcCcccCCccccCCCCHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHH
Confidence 33447777655442 23444456666666778889999999999999999999999999999 9999999999888
Q ss_pred hcCC
Q 011353 429 MSDM 432 (488)
Q Consensus 429 ~~~~ 432 (488)
.+|.
T Consensus 476 ~l~~ 479 (505)
T d2cfua2 476 QLGY 479 (505)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.03 E-value=0.79 Score=32.15 Aligned_cols=31 Identities=16% Similarity=0.296 Sum_probs=21.6
Q ss_pred HhhhhHHHhhhHHHhhcCHHHHHHHHHHHHh
Q 011353 380 QETLNSKKKGDVAFRHKDFRASIECYTQFID 410 (488)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 410 (488)
..+..+..+|..+-+.|+|++|+..|.+||+
T Consensus 13 ~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie 43 (93)
T d1wfda_ 13 TAAVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3445566777777777888877777777763
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=80.71 E-value=0.45 Score=33.46 Aligned_cols=19 Identities=11% Similarity=0.247 Sum_probs=14.1
Q ss_pred cCHHHHHHHHHHHHhcCCC
Q 011353 396 KDFRASIECYTQFIDVGTM 414 (488)
Q Consensus 396 ~~~~~A~~~~~~ai~~~p~ 414 (488)
.+...|+...++|++.|..
T Consensus 10 ~~~~~A~~l~~~Av~~D~~ 28 (93)
T d1wfda_ 10 SDSTAAVAVLKRAVELDAE 28 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHc
Confidence 3456788888888887765
|